DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
breast cancer	1_113630788	rs1230666	ENSG00000226167.1	AP4B1-AS1	-225847	0.000103401	0.342	4e-10
breast cancer	1_113903258	rs7513707	ENSG00000118655.4	DCLRE1B	-1944	1.41e-05	-0.303504	2e-11
breast cancer	1_113903258	rs7513707	ENSG00000226167.1	AP4B1-AS1	46623	8.73e-08	-0.408	2e-11
breast cancer	1_113905767	rs11552449	ENSG00000118655.4	DCLRE1B	565	1.41e-05	-0.304	2e-08
breast cancer	1_113905767	rs11552449	ENSG00000226167.1	AP4B1-AS1	49132	8.73e-08	-0.408	2e-08
breast cancer	1_113905767	rs11552449	ENSG00000118655.4	DCLRE1B	565	1.41e-05	-0.304	6e-07
breast cancer	1_113905767	rs11552449	ENSG00000226167.1	AP4B1-AS1	49132	8.73e-08	-0.408	6e-07
breast cancer	1_113905767	rs11552449	ENSG00000118655.4	DCLRE1B	565	1.41e-05	-0.304	3e-09
breast cancer	1_113905767	rs11552449	ENSG00000226167.1	AP4B1-AS1	49132	8.73e-08	-0.408	3e-09
breast cancer	1_113905767	rs11552449	ENSG00000118655.4	DCLRE1B	565	1.41e-05	-0.304	5e-11
breast cancer	1_113905767	rs11552449	ENSG00000226167.1	AP4B1-AS1	49132	8.73e-08	-0.408	5e-11
breast cancer	1_113905767	rs11552449	ENSG00000118655.4	DCLRE1B	565	1.41e-05	-0.304	1e-09
breast cancer	1_113905767	rs11552449	ENSG00000226167.1	AP4B1-AS1	49132	8.73e-08	-0.408	1e-09
breast cancer	1_121121848	rs369304377	ENSG00000223345.3	H2BP1	4591	4.89e-29	0.913	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000270392.2	PFN1P2	687796	2.52e-22	0.816	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000270231.3	NBPF8	685495	1.67e-30	0.956	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000213244.3	H3P4	3238	5.01e-08	0.485	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000226067.6	LINC00623	169409	7.42e-07	0.503	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000273136.6	NBPF26	397925	1.15e-18	0.786	2e-29
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.83e-15	0.696	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.1e-12	0.65	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000231752.5	EMBP1	19703	2.51e-05	-0.325	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	3.52e-06	0.467	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.83e-15	0.696	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.1e-12	0.65	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000231752.5	EMBP1	19703	2.51e-05	-0.325	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	3.52e-06	0.467	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.83e-15	0.696	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.1e-12	0.65	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000231752.5	EMBP1	19703	2.51e-05	-0.325	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	3.52e-06	0.467	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.83e-15	0.696	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.1e-12	0.65	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000231752.5	EMBP1	19703	2.51e-05	-0.325	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	3.52e-06	0.467	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.83e-15	0.696	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.1e-12	0.65	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000231752.5	EMBP1	19703	2.51e-05	-0.325	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	3.52e-06	0.467	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.83e-15	0.696	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.1e-12	0.65	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000231752.5	EMBP1	19703	2.51e-05	-0.325	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	3.52e-06	0.467	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.83e-15	0.696	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.1e-12	0.65	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000231752.5	EMBP1	19703	2.51e-05	-0.325	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	3.52e-06	0.467	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.83e-15	0.696	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.1e-12	0.65	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000231752.5	EMBP1	19703	2.51e-05	-0.325	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	3.52e-06	0.467	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.83e-15	0.696	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.1e-12	0.65	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000231752.5	EMBP1	19703	2.51e-05	-0.325	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	3.52e-06	0.467	9e-13
breast cancer	1_155176305	rs4971059	ENSG00000169242.11	EFNA1	48845	6.22e-07	-0.243	2e-10
breast cancer	1_155176305	rs4971059	ENSG00000169242.11	EFNA1	48845	6.22e-07	-0.243	5e-11
breast cancer	1_155212052	rs2974935	ENSG00000125459.14	MSTO1	-398153	2.05e-07	0.28	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000169231.13	THBS3	4071	3.85e-11	0.357	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000169242.11	EFNA1	84592	1.31e-07	-0.239	2e-07
breast cancer	1_155212373	rs2075570	ENSG00000169231.13	THBS3	4392	1.55e-11	0.362	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000125459.14	MSTO1	-397832	2.23e-07	0.278	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000169242.11	EFNA1	84913	2.28e-07	-0.233802	5e-06
breast cancer	1_155216951	rs1057941	ENSG00000169231.13	THBS3	8970	1.51e-06	0.273	2e-07
breast cancer	1_155216951	rs1057941	ENSG00000169242.11	EFNA1	89491	9.76e-06	-0.207	2e-07
breast cancer	1_155302483	rs7524950	ENSG00000143630.9	HCN3	24900	9.58e-06	-0.25	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000125459.14	MSTO1	-307722	8.88e-13	0.424	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000225855.6	RUSC1-AS1	-19204	1.77e-09	0.473	3e-09
breast cancer	1_155446537	rs10796944	ENSG00000143630.9	HCN3	168954	8.38e-06	-0.259	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000225855.6	RUSC1-AS1	124850	1.84e-07	0.428	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000125459.14	MSTO1	-163668	2.48e-11	0.412	7e-10
breast cancer	1_155587180	rs12091730	ENSG00000225855.6	RUSC1-AS1	265493	9.2e-07	0.413255	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000143630.9	HCN3	309597	1.52e-05	-0.257	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000125459.14	MSTO1	-23025	1.5e-11	0.425	2e-10
breast cancer	1_155697170	rs348196	ENSG00000125459.14	MSTO1	86965	1.34e-13	0.459	2e-08
breast cancer	1_155697170	rs348196	ENSG00000225855.6	RUSC1-AS1	375483	1.8e-06	0.402	2e-08
breast cancer	1_155697170	rs348196	ENSG00000143630.9	HCN3	419587	2.19e-06	-0.279	2e-08
breast cancer	1_16013277	rs1763604	ENSG00000185519.8	FAM131C	-60355	2.41e-06	0.338	7e-09
breast cancer	1_203832121	rs59867004	ENSG00000182004.12	SNRPE	-29482	1.13e-05	0.333	1e-10
breast cancer	1_204546897	rs2290854	ENSG00000198625.12	MDM4	30518	3.53e-05	-0.258	1e-07
breast cancer	1_42592453	rs113319441	ENSG00000186409.14	CCDC30	129123	0.000112412	-0.951	6e-06
breast cancer	1_45918469	rs12077974	ENSG00000117448.13	AKR1A1	367926	2.47e-05	0.261	2e-07
breast cancer	1_46135245	rs1707302	ENSG00000232022.7	FAAHP1	-296884	0.000148276	-0.267	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000232022.7	FAAHP1	-296884	0.000148276	-0.267	3e-10
breast cancer	1_7857016	rs707475	ENSG00000049247.13	UTS2	3504	2.47e-06	0.456	1e-07
breast cancer	1_8035440	rs225132	ENSG00000116288.12	PARK7	81149	9.3e-06	-0.231	3e-06
breast cancer	1_91555907	rs12134245	ENSG00000097046.12	CDC7	55014	4.43e-22	-0.494	4e-06
breast cancer	10_121904429	rs7899628	ENSG00000226864.2	ATE1-AS1	-23883	5.45e-11	-0.589	9e-10
breast cancer	10_21533927	rs10828247	ENSG00000204682.5	MIR1915HG	36665	9.5e-05	0.235	3e-13
breast cancer	10_21535798	rs10828249	ENSG00000204682.5	MIR1915HG	38536	0.000129628	0.233	5e-08
breast cancer	10_21545607	rs7098100	ENSG00000204682.5	MIR1915HG	48345	6.15e-05	0.242	1e-18
breast cancer	10_27080233	rs7918232	ENSG00000120539.14	MASTL	-75034	2.76e-11	0.705	8e-06
breast cancer	10_27080233	rs7918232	ENSG00000230445.4	LRRC37A6P	-179222	1.47e-09	0.7	8e-06
breast cancer	10_5752689	rs55910451	ENSG00000057608.16	GDI2	-89443	1.62e-12	-0.411	4e-07
breast cancer	10_92172529	rs72807246	ENSG00000228701.1	TNKS2-DT	374238	2.89e-05	0.548	3e-06
breast cancer	11_111765903	rs643506	ENSG00000137713.15	PPP2R1B	-524	2.8e-05	-0.294	2e-07
breast cancer	11_120362917	rs7924772	ENSG00000196914.8	ARHGEF12	26003	5.71e-11	-0.22	4e-08
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	1.9e-05	-0.356	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172638.12	EFEMP2	-57997	1.3e-22	-0.542	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	1.9e-05	-0.356	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172638.12	EFEMP2	-57997	1.3e-22	-0.542	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	1.9e-05	-0.356	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172638.12	EFEMP2	-57997	1.3e-22	-0.542	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	1.9e-05	-0.356	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172638.12	EFEMP2	-57997	1.3e-22	-0.542	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	1.9e-05	-0.356	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172638.12	EFEMP2	-57997	1.3e-22	-0.542	6e-12
breast cancer	11_65935052	rs617791	ENSG00000172803.17	SNX32	101411	2.58e-06	-0.412	7e-06
breast cancer	11_65935052	rs617791	ENSG00000172638.12	EFEMP2	61460	6.38e-14	-0.465	7e-06
breast cancer	11_66301747	rs1783730	ENSG00000087365.15	SF3B2	251018	0.000185232	-0.242	3e-07
breast cancer	11_66843174	rs7570	ENSG00000255468.6	B4GAT1-DT	495224	2.72e-07	0.424	8e-06
breast cancer	11_66843174	rs7570	ENSG00000173599.13	PC	-115202	4.2e-05	-0.263	8e-06
breast cancer	11_66843174	rs7570	ENSG00000173621.8	LRFN4	-13473	4.29e-05	-0.202	8e-06
breast cancer	11_66843174	rs7570	ENSG00000173715.15	C11orf80	98723	4.38e-10	-0.415	8e-06
breast cancer	11_69138652	rs72932523	ENSG00000162341.16	TPCN2	89755	3.57e-08	0.597	1e-09
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	4.04e-28	0.821	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177666.16	PNPLA2	-15885	6.44e-06	-0.255	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	2.02e-40	0.749	3e-12
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	4.04e-28	0.821	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177666.16	PNPLA2	-15885	6.44e-06	-0.255	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	2.02e-40	0.749	1e-12
breast cancer	12_111621753	rs11065979	ENSG00000173064.12	HECTD4	-760686	0.000112803	0.161	5e-06
breast cancer	14_67599772	rs7149859	ENSG00000100564.8	PIGH	-515	7e-08	-0.302	7e-07
breast cancer	15_50402109	rs4774565	ENSG00000244879.6	GABPB1-AS1	46700	7.31e-13	-0.713	2e-06
breast cancer	15_50402109	rs4774565	ENSG00000104064.16	GABPB1	47151	1.22e-07	-0.286	2e-06
breast cancer	15_74843920	rs6938	ENSG00000178802.17	MPI	-46085	5.61e-06	0.223	9e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	3.92e-06	0.222	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	3.92e-06	0.222	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	3.92e-06	0.222	5e-08
breast cancer	15_75516399	rs8027365	ENSG00000140400.16	MAN2C1	148245	5.77e-18	0.401	1e-07
breast cancer	15_77977130	rs12906542	ENSG00000136425.12	CIB2	-154367	1.74e-07	-0.467	7e-07
breast cancer	15_77977130	rs12906542	ENSG00000260776.5	GOLGA6FP	50284	3.21e-21	-0.965	7e-07
breast cancer	15_77977130	rs12906542	ENSG00000140403.12	DNAJA4	-287027	2.26e-05	-0.266	7e-07
breast cancer	15_90965985	rs77554484	ENSG00000166965.12	RCCD1	10189	1.23e-32	0.945	1e-15
breast cancer	15_90965985	rs77554484	ENSG00000196547.14	MAN2A2	63767	8.54e-08	-0.267	1e-15
breast cancer	15_90965985	rs77554484	ENSG00000258725.1	PRC1-AS1	-6875	2.4e-14	-0.716	1e-15
breast cancer	15_90968837	rs2290203	ENSG00000196547.14	MAN2A2	66619	1e-08	-0.23	2e-19
breast cancer	15_90968837	rs2290203	ENSG00000140553.17	UNC45A	34860	6.74e-08	-0.328	2e-19
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	2.74e-19	-0.662	2e-19
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	7.18e-12	0.501	2e-19
breast cancer	15_90968837	rs2290203	ENSG00000196547.14	MAN2A2	66619	1e-08	-0.23	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000140553.17	UNC45A	34860	6.74e-08	-0.328	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	2.74e-19	-0.662	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	7.18e-12	0.501	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000196547.14	MAN2A2	66619	1e-08	-0.23	4e-08
breast cancer	15_90968837	rs2290203	ENSG00000140553.17	UNC45A	34860	6.74e-08	-0.328	4e-08
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	2.74e-19	-0.662	4e-08
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	7.18e-12	0.501	4e-08
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	1.37e-12	-0.352	3e-10
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	1.37e-12	-0.352	4e-08
breast cancer	16_56497273	rs2303282	ENSG00000125124.11	BBS2	-23010	8.7e-16	-0.395	3e-07
breast cancer	16_71475893	rs8050871	ENSG00000167377.17	ZNF23	12798	7.12e-08	-0.309	3e-06
breast cancer	17_2195889	rs16952006	ENSG00000167720.12	SRR	-107494	1.97e-05	-0.611	3e-06
breast cancer	17_30560116	rs111780165	ENSG00000108587.15	GOSR1	82754	1.25e-05	-0.444	8e-08
breast cancer	17_30884649	rs7223535	ENSG00000108587.15	GOSR1	407287	6.55e-06	-0.253	4e-10
breast cancer	17_30884649	rs7223535	ENSG00000264538.6	SUZ12P1	175350	2.98e-05	0.346	4e-10
breast cancer	17_30884649	rs7223535	ENSG00000176390.11	CRLF3	59873	3.87e-07	0.327	4e-10
breast cancer	17_30887862	rs113934718	ENSG00000108587.15	GOSR1	410500	5.93e-06	-0.26	1e-08
breast cancer	17_30887862	rs113934718	ENSG00000176390.11	CRLF3	63086	8.25e-08	0.352	1e-08
breast cancer	17_30887862	rs113934718	ENSG00000264538.6	SUZ12P1	178563	2.34e-05	0.358885	1e-08
breast cancer	17_30894259	rs62070652	ENSG00000108587.15	GOSR1	416897	5.93e-06	-0.26	6e-09
breast cancer	17_30894259	rs62070652	ENSG00000176390.11	CRLF3	69483	8.25e-08	0.352	6e-09
breast cancer	17_30894259	rs62070652	ENSG00000264538.6	SUZ12P1	184960	2.34e-05	0.359	6e-09
breast cancer	17_30894259	rs62070652	ENSG00000108587.15	GOSR1	416897	5.93e-06	-0.26	1e-06
breast cancer	17_30894259	rs62070652	ENSG00000176390.11	CRLF3	69483	8.25e-08	0.352	1e-06
breast cancer	17_30894259	rs62070652	ENSG00000264538.6	SUZ12P1	184960	2.34e-05	0.359	1e-06
breast cancer	17_45394123	rs4763	ENSG00000262500.1	MAPK8IP1P1	-849483	4.54e-21	1.04	2e-08
breast cancer	17_45394123	rs4763	ENSG00000267121.5	FMNL1-DT	172335	9.52e-06	-0.437	2e-08
breast cancer	17_45394123	rs4763	ENSG00000263503.1	MAPK8IP1P2	-208217	5.26e-20	1	2e-08
breast cancer	17_45394123	rs4763	ENSG00000279685.2	MAPT-IT1	-501660	2.14e-06	0.452	2e-08
breast cancer	17_45394123	rs4763	ENSG00000184922.13	FMNL1	171900	2.09e-16	-0.668	2e-08
breast cancer	17_45394123	rs4763	ENSG00000185294.6	SPPL2C	-450712	9.95e-12	0.602	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214401.4	KANSL1-AS1	-799453	6.33e-24	1.04	2e-08
breast cancer	17_45394123	rs4763	ENSG00000204650.14	LINC02210	-226205	2.33e-06	0.338	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214425.7	LRRC37A4P	-156212	8.27e-31	-1.1	2e-08
breast cancer	17_45394123	rs4763	ENSG00000176681.14	LRRC37A	-898610	4.63e-20	1.01	2e-08
breast cancer	17_45394123	rs4763	ENSG00000264070.1	DND1P1	-191748	4.98e-11	0.629	2e-08
breast cancer	17_45394123	rs4763	ENSG00000225190.10	PLEKHM1	-96626	5e-19	-0.847	2e-08
breast cancer	17_45394123	rs4763	ENSG00000159314.11	ARHGAP27	-40298	2.11e-06	0.518	2e-08
breast cancer	17_45394123	rs4763	ENSG00000186868.15	MAPT	-500259	6.76e-05	-0.254	2e-08
breast cancer	17_45941122	rs62061734	ENSG00000184922.13	FMNL1	718899	2.44e-21	-0.69	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000279685.2	MAPT-IT1	45339	4.85e-09	0.506	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000185829.17	ARL17A	-638560	2.9e-31	1.07	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000176681.14	LRRC37A	-351611	1.06e-26	1.04	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000262500.1	MAPK8IP1P1	-302484	7.44e-33	1.13	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000238083.7	LRRC37A2	-570389	1.37e-44	1.14	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000120071.13	KANSL1	-284267	0.000122329	0.291	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000186868.15	MAPT	46740	2.93e-06	-0.272	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214425.7	LRRC37A4P	390787	2.8e-40	-1.1	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000204650.14	LINC02210	320794	4.93e-07	0.33	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000264070.1	DND1P1	355251	1.89e-16	0.702	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000267121.5	FMNL1-DT	719334	5.89e-10	-0.548	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000185294.6	SPPL2C	96287	5.33e-20	0.709	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000232300.1	FAM215B	-621673	5.51e-20	0.815	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000263503.1	MAPK8IP1P2	338782	4.76e-34	1.13	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214401.4	KANSL1-AS1	-252454	5.35e-35	1.1	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000225190.10	PLEKHM1	450373	6.76e-36	-0.991	8e-12
breast cancer	17_46751565	rs199533	ENSG00000238083.7	LRRC37A2	240054	1.19e-46	1.16	5e-08
breast cancer	17_46751565	rs199533	ENSG00000185294.6	SPPL2C	906730	1.22e-23	0.762	5e-08
breast cancer	17_46751565	rs199533	ENSG00000262500.1	MAPK8IP1P1	507959	1.11e-34	1.15	5e-08
breast cancer	17_46751565	rs199533	ENSG00000279685.2	MAPT-IT1	855782	1.94e-08	0.49	5e-08
breast cancer	17_46751565	rs199533	ENSG00000120071.13	KANSL1	526176	3.81e-06	0.349	5e-08
breast cancer	17_46751565	rs199533	ENSG00000263142.5	LRRC37A17P	-265628	5.25e-05	-0.377	5e-08
breast cancer	17_46751565	rs199533	ENSG00000186868.15	MAPT	857183	6.45e-06	-0.265	5e-08
breast cancer	17_46751565	rs199533	ENSG00000185829.17	ARL17A	171883	3.26e-36	1.12	5e-08
breast cancer	17_46751565	rs199533	ENSG00000073969.18	NSF	160896	0.000121467	-0.153	5e-08
breast cancer	17_46751565	rs199533	ENSG00000176681.14	LRRC37A	458832	2.31e-24	1.01	5e-08
breast cancer	17_46751565	rs199533	ENSG00000232300.1	FAM215B	188770	1.54e-23	0.875	5e-08
breast cancer	17_46751565	rs199533	ENSG00000214401.4	KANSL1-AS1	557989	2.77e-41	1.16	5e-08
breast cancer	17_46788237	rs199498	ENSG00000263142.5	LRRC37A17P	-228956	0.000194484	-0.348	2e-08
breast cancer	17_46788237	rs199498	ENSG00000185294.6	SPPL2C	943402	8.97e-15	0.622	2e-08
breast cancer	17_46788237	rs199498	ENSG00000238083.7	LRRC37A2	276726	1.12e-29	1.01	2e-08
breast cancer	17_46788237	rs199498	ENSG00000120071.13	KANSL1	562848	5.66e-05	0.306	2e-08
breast cancer	17_46788237	rs199498	ENSG00000214401.4	KANSL1-AS1	594661	5.27e-24	0.961	2e-08
breast cancer	17_46788237	rs199498	ENSG00000262500.1	MAPK8IP1P1	544631	3e-23	0.99677	2e-08
breast cancer	17_46788237	rs199498	ENSG00000279685.2	MAPT-IT1	892454	2.57e-07	0.452075	2e-08
breast cancer	17_46788237	rs199498	ENSG00000176681.14	LRRC37A	495504	7.12e-19	0.909	2e-08
breast cancer	17_46788237	rs199498	ENSG00000185829.17	ARL17A	208555	2.44e-25	0.992	2e-08
breast cancer	17_46788237	rs199498	ENSG00000232300.1	FAM215B	225442	1.13e-15	0.735	2e-08
breast cancer	17_50196930	rs2075555	ENSG00000108823.15	SGCA	30945	1.01e-05	-0.529	8e-08
breast cancer	17_68904663	rs36059695	ENSG00000141338.13	ABCA8	-50729	2.33e-10	1.24	6e-08
breast cancer	17_81211408	rs9913021	ENSG00000157637.12	SLC38A10	-84139	8.57e-06	0.276	2e-06
breast cancer	17_82597601	rs62079673	ENSG00000141580.15	WDR45B	-50952	1.5e-08	0.352	1e-06
breast cancer	18_26920652	rs232320	ENSG00000260372.6	AQP4-AS1	264910	3.39e-07	-0.426	6e-09
breast cancer	19_12846836	rs117758012	ENSG00000179284.5	DAND5	-118323	4.7e-05	-0.625	5e-07
breast cancer	19_13047463	rs78269692	ENSG00000179284.5	DAND5	82304	1.14e-05	-0.718	2e-09
breast cancer	19_18422832	rs7258465	ENSG00000105656.12	ELL	-99295	2.04e-06	0.272	3e-28
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	3.01e-06	0.268	6e-14
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	3.01e-06	0.268	6e-06
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	3.01e-06	0.268	5e-28
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	3.01e-06	0.26791	2e-31
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	3.01e-06	0.26791	5e-15
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	3.01e-06	0.26791	4e-15
breast cancer	19_19417997	rs1469713	ENSG00000187664.8	HAPLN4	155201	7.61e-06	0.155	1e-10
breast cancer	19_19417997	rs1469713	ENSG00000213996.12	TM6SF2	144606	8.94e-12	0.514	1e-10
breast cancer	19_19417997	rs1469713	ENSG00000250067.11	YJEFN3	-111367	8.89e-06	-0.228	1e-10
breast cancer	19_19434887	rs2965183	ENSG00000250067.11	YJEFN3	-94477	8.44e-06	-0.231	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000213996.12	TM6SF2	161496	8.92e-13	0.54	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000187664.8	HAPLN4	172091	5.5e-06	0.159	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000250067.11	YJEFN3	-94477	8.44e-06	-0.231	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000213996.12	TM6SF2	161496	8.92e-13	0.54	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000187664.8	HAPLN4	172091	5.5e-06	0.159	1e-11
breast cancer	19_19535463	rs2304098	ENSG00000213996.12	TM6SF2	262072	8.92e-13	0.54	2e-11
breast cancer	19_19535463	rs2304098	ENSG00000250067.11	YJEFN3	6099	8.44e-06	-0.231	2e-11
breast cancer	19_19535463	rs2304098	ENSG00000187664.8	HAPLN4	272667	5.5e-06	0.159	2e-11
breast cancer	19_43779080	rs1685191	ENSG00000159871.14	LYPD5	-48126	3.01e-05	0.335	4e-20
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	8.06e-08	0.435	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	8.06e-08	0.435	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	8.06e-08	0.435	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	8.06e-08	0.435	1e-16
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	8.06e-08	0.435	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	8.06e-08	0.435	2e-14
breast cancer	19_43919418	rs375066	ENSG00000124459.11	ZNF45	-15860	3.01e-06	-0.302	2e-14
breast cancer	19_43919418	rs375066	ENSG00000176222.8	ZNF404	35367	1.66e-06	-0.24	2e-14
breast cancer	19_51869723	rs10411161	ENSG00000161551.14	ZNF577	-18253	8.39e-06	-0.678	7e-06
breast cancer	19_51869723	rs10411161	ENSG00000198093.10	ZNF649	-35317	4.35e-05	-0.484	7e-06
breast cancer	19_51942133	rs8113308	ENSG00000176024.17	ZNF613	14986	2.35e-06	-0.36	6e-07
breast cancer	19_52526945	rs162277	ENSG00000123870.10	ZNF137P	-61560	3.64e-05	-0.4	7e-06
breast cancer	2_111138666	rs17041869	ENSG00000153094.22	BCL2L11	19288	6.5e-07	-0.564	2e-09
breast cancer	2_171568284	rs11675683	ENSG00000071967.11	CYBRD1	46037	6.7e-06	0.188	4e-08
breast cancer	2_201258707	rs3769821	ENSG00000064012.21	CASP8	25264	6.27e-18	-0.753	4e-18
breast cancer	2_201258707	rs3769821	ENSG00000155749.12	FLACC1	-98691	5.7e-13	-0.608	4e-18
breast cancer	2_201279205	rs10931936	ENSG00000064012.21	CASP8	45762	5.12e-28	-1.05	6e-06
breast cancer	2_201279205	rs10931936	ENSG00000155749.12	FLACC1	-78193	2.09e-10	-0.635	6e-06
breast cancer	2_201288355	rs1035142	ENSG00000064012.21	CASP8	54912	3.14e-15	-0.718	3e-09
breast cancer	2_201288355	rs1035142	ENSG00000155749.12	FLACC1	-69043	7.9e-21	-0.771	3e-09
breast cancer	2_201288502	rs700635	ENSG00000155749.12	FLACC1	-68896	2.09e-10	-0.635	5e-16
breast cancer	2_201288502	rs700635	ENSG00000064012.21	CASP8	55059	5.12e-28	-1.05	5e-16
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	1.66e-27	-1.04	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.43e-09	-0.607	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	1.66e-27	-1.04	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.43e-09	-0.607	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	1.66e-27	-1.04	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.43e-09	-0.607	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	1.66e-27	-1.04	6e-24
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.43e-09	-0.606836	6e-24
breast cancer	2_201384985	rs2714486	ENSG00000155749.12	FLACC1	27587	7.95e-05	0.452	7e-10
breast cancer	2_201384985	rs2714486	ENSG00000064012.21	CASP8	151542	8.4e-10	0.727	7e-10
breast cancer	2_201502866	rs77688320	ENSG00000064012.21	CASP8	269423	8.45e-09	0.75	3e-09
breast cancer	2_24906604	rs6725517	ENSG00000224165.5	DNAJC27-AS1	-64786	2.5e-08	-0.321	3e-12
breast cancer	2_24906604	rs6725517	ENSG00000224165.5	DNAJC27-AS1	-64786	2.5e-08	-0.321	5e-11
breast cancer	2_25068670	rs1971136	ENSG00000224165.5	DNAJC27-AS1	97280	5.26e-11	0.366	5e-09
breast cancer	2_69900097	rs6716937	ENSG00000087338.4	GMCL1	70455	1.24e-10	-0.292	4e-07
breast cancer	2_69900097	rs6716937	ENSG00000124380.10	SNRNP27	6537	1.17e-08	-0.277435	4e-07
breast cancer	2_69945455	rs6756513	ENSG00000087338.4	GMCL1	115813	9.79e-07	-0.261628	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	8.23e-11	-1.11	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	8.23e-11	-1.11	6e-09
breast cancer	22_41323244	rs73176670	ENSG00000205702.10	CYP2D7	-821333	8.64e-05	0.794	1e-08
breast cancer	22_41815785	rs8137282	ENSG00000205702.10	CYP2D7	-328792	4.54e-05	0.981491	2e-07
breast cancer	3_156645453	rs2136690	ENSG00000197980.12	LEKR1	-180028	5.04e-05	0.378	4e-06
breast cancer	3_63956021	rs3821902	ENSG00000163634.11	THOC7	92118	4.4e-05	-0.37	3e-12
breast cancer	3_63982224	rs1053338	ENSG00000163634.11	THOC7	118321	1.88e-05	-0.382	7e-10
breast cancer	3_63982224	rs1053338	ENSG00000163634.11	THOC7	118321	1.88e-05	-0.382	5e-11
breast cancer	3_63982224	rs1053338	ENSG00000163634.11	THOC7	118321	1.88e-05	-0.382491	2e-07
breast cancer	3_63982224	rs1053338	ENSG00000163634.11	THOC7	118321	1.88e-05	-0.382491	9e-09
breast cancer	5_128098106	rs1112956	ENSG00000245937.7	SLC12A2-DT	14934	4.2e-08	0.459254	9e-06
breast cancer	5_128227188	rs36715	ENSG00000245937.7	SLC12A2-DT	144016	1.9e-06	0.371	4e-06
breast cancer	5_132304843	rs6860806	ENSG00000233006.6	MIR3936HG	-64805	4.68e-05	0.273792	8e-08
breast cancer	5_132304843	rs6860806	ENSG00000233006.6	MIR3936HG	-64805	4.68e-05	0.274	3e-08
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	2.65e-06	-0.391	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000072682.18	P4HA2	170940	7.46e-06	-0.278	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	2.65e-06	-0.391	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000072682.18	P4HA2	170940	7.46e-06	-0.278	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	2.65e-06	-0.391	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000072682.18	P4HA2	170940	7.46e-06	-0.278	1e-08
breast cancer	5_132497907	rs736801	ENSG00000197536.11	IRF1-AS1	87271	1.48e-06	0.423193	8e-08
breast cancer	5_132497907	rs736801	ENSG00000072682.18	P4HA2	202592	4.63e-06	0.3	8e-08
breast cancer	5_133071366	rs6596100	ENSG00000170606.14	HSPA4	19404	2.27e-07	0.272	2e-08
breast cancer	5_133071366	rs6596100	ENSG00000170606.14	HSPA4	19404	2.27e-07	0.272275	8e-09
breast cancer	5_56977866	rs10036895	ENSG00000155542.11	SETD9	68606	5.88e-09	0.533	2e-12
breast cancer	5_81972251	rs111549985	ENSG00000205464.11	ATP6AP1L	-307211	4.6e-27	0.956	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000152348.15	ATG10	226	2.62e-34	1.02	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000186468.12	RPS23	-306326	4.96e-32	-0.86	6e-12
breast cancer	5_82161539	rs2407064	ENSG00000205464.11	ATP6AP1L	-117923	2.67e-28	-0.953	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000186468.12	RPS23	-117038	1.28e-33	0.857	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000152348.15	ATG10	189514	1.25e-30	-0.966	3e-08
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	4.68e-29	-0.978	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	9.27e-36	0.902	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	6.69e-30	-1.00271	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	4.68e-29	-0.978	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	9.27e-36	0.902145	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	6.69e-30	-1	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	4.68e-29	-0.978	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	9.27e-36	0.902	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	6.69e-30	-1	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	4.68e-29	-0.977721	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	9.27e-36	0.902	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	6.69e-30	-1	2e-12
breast cancer	5_82340549	rs2407156	ENSG00000186468.12	RPS23	61972	1.86e-30	-0.824	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000205464.11	ATP6AP1L	61087	3.1e-27	0.934	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000152348.15	ATG10	368524	1.65e-22	0.855	2e-06
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.93e-09	-0.596	4e-08
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.93e-09	-0.596	2e-12
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.93e-09	-0.596	8e-10
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.93e-09	-0.596	3e-12
breast cancer	6_25710343	rs68006638	ENSG00000186470.13	BTN3A2	-654816	1.94e-07	-0.978	2e-07
breast cancer	6_25874195	rs13198474	ENSG00000124549.14	BTN2A3P	-547196	0.000256013	0.692	2e-07
breast cancer	6_25874195	rs13198474	ENSG00000186470.13	BTN3A2	-490964	1.79e-07	-0.997	2e-07
breast cancer	6_26175638	rs17598658	ENSG00000186470.13	BTN3A2	-189521	4.93e-11	-1.1	2e-09
breast cancer	6_26175638	rs17598658	ENSG00000124549.14	BTN2A3P	-245753	0.000173086	0.639	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000112812.15	PRSS16	-784355	5.08e-10	0.92	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000186470.13	BTN3A2	98187	9.75e-12	-1.05	2e-09
breast cancer	6_26993501	rs34546498	ENSG00000112812.15	PRSS16	-254200	5.08e-10	0.92	9e-10
breast cancer	6_26993501	rs34546498	ENSG00000186470.13	BTN3A2	628342	9.75e-12	-1.05	9e-10
breast cancer	6_27307055	rs56114371	ENSG00000186470.13	BTN3A2	941896	9.75e-12	-1.05101	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000219392.1	ZNF602P	-808573	9.06e-09	-0.85773	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000226314.7	ZKSCAN8P1	-854726	1.88e-07	0.827922	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000137185.11	ZSCAN9	-917831	8.67e-06	0.407716	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000216901.1	ZNF603P	-869133	9.59e-08	0.905661	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000198315.10	ZKSCAN8	-834855	6.59e-05	-0.295395	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000112812.15	PRSS16	59354	5.08e-10	0.920263	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000197062.11	ZSCAN26	-959955	1.06e-07	-0.538925	2e-09
breast cancer	6_27457865	rs34196306	ENSG00000137185.11	ZSCAN9	-767021	2.22e-06	0.435158	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000198315.10	ZKSCAN8	-684045	3.66e-05	-0.307168	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000219392.1	ZNF602P	-657763	1.43e-09	-0.90476	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000197062.11	ZSCAN26	-809145	2.07e-08	-0.569665	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000216901.1	ZNF603P	-718323	5.87e-09	0.987253	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000112812.15	PRSS16	210164	3.82e-08	0.829586	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000226314.7	ZKSCAN8P1	-703916	2.1e-08	0.890992	1e-09
breast cancer	6_27873148	rs45509595	ENSG00000197062.11	ZSCAN26	-393862	1.59e-07	-0.521272	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000219392.1	ZNF602P	-242480	1.52e-09	-0.878988	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000216901.1	ZNF603P	-303040	7.42e-09	0.954733	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000198315.10	ZKSCAN8	-268762	0.000136653	-0.277167	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000112812.15	PRSS16	625447	1.17e-09	0.884479	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000226314.7	ZKSCAN8P1	-288633	4.58e-09	0.903076	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000137185.11	ZSCAN9	-351738	4.48e-07	0.449547	5e-09
breast cancer	6_28106103	rs34662244	ENSG00000112812.15	PRSS16	858402	6.08e-10	0.886548	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000216901.1	ZNF603P	-70085	2.19e-09	0.972237	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000198315.10	ZKSCAN8	-35807	4.13e-05	-0.293197	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000219392.1	ZNF602P	-9525	5.65e-10	-0.888041	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000226314.7	ZKSCAN8P1	-55678	1.8e-09	0.912527	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000137185.11	ZSCAN9	-118783	1.72e-07	0.458447	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000197062.11	ZSCAN26	-160907	3.48e-07	-0.501312	3e-09
breast cancer	6_28364364	rs13214023	ENSG00000137185.11	ZSCAN9	139478	1.72e-07	0.458447	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000197062.11	ZSCAN26	97354	3.48e-07	-0.501312	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000216901.1	ZNF603P	188176	2.19e-09	0.972237	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000226314.7	ZKSCAN8P1	202583	1.8e-09	0.912527	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000198315.10	ZKSCAN8	222454	4.13e-05	-0.293197	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000219392.1	ZNF602P	248736	5.65e-10	-0.888041	1e-09
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	3.9e-05	0.429699	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	3.9e-05	0.429699	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	3.9e-05	0.429699	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	3.9e-05	0.429699	7e-08
breast cancer	6_29280372	rs3130834	ENSG00000230795.3	HLA-K	-646806	6.25e-05	-0.76494	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000181126.13	HLA-V	-510582	6.48e-06	-0.787598	5e-09
breast cancer	6_29388554	rs9257809	ENSG00000230795.3	HLA-K	-538624	1.23e-05	-0.809021	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000181126.13	HLA-V	-402400	4.39e-06	-0.779325	3e-08
breast cancer	6_29509637	rs1233480	ENSG00000176998.4	HCG4	-282799	0.000123528	-0.587654	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000181126.13	HLA-V	-281317	3.35e-06	-0.650339	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000230795.3	HLA-K	-417541	0.000195648	-0.573075	5e-08
breast cancer	6_29693039	rs3116813	ENSG00000230795.3	HLA-K	-234139	5.47e-07	-0.928072	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000273340.1	MICE	-52195	0.000180982	-0.694974	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000181126.13	HLA-V	-97915	9.66e-06	-0.760006	6e-07
breast cancer	6_29785031	rs147680653	ENSG00000230795.3	HLA-K	-142147	5.47e-07	-0.928072	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000273340.1	MICE	39797	0.000180982	-0.694974	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000181126.13	HLA-V	-5923	9.66e-06	-0.760006	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000137312.14	FLOT1	-957702	9.4e-11	0.702184	1e-06
breast cancer	6_29882943	rs1611579	ENSG00000137312.14	FLOT1	-859790	2.54e-10	0.666998	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000273340.1	MICE	137709	0.000121313	-0.691226	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000230795.3	HLA-K	-44235	8.84e-07	-0.884636	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000181126.13	HLA-V	91989	3.95e-06	-0.766803	8e-07
breast cancer	6_30003183	rs3094146	ENSG00000230795.3	HLA-K	76005	8.84e-07	-0.884636	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000137312.14	FLOT1	-739550	2.54e-10	0.666998	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000181126.13	HLA-V	212229	3.95e-06	-0.766803	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000273340.1	MICE	257949	0.000121313	-0.691226	7e-07
breast cancer	6_30107326	rs2523992	ENSG00000204623.9	ZNRD1ASP	46073	2.7e-05	-0.332067	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000181126.13	HLA-V	316372	2.05e-05	-0.575792	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000230795.3	HLA-K	180148	5.36e-07	-0.729449	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000239257.1	RPL23AP1	380444	7.57e-05	-0.531592	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000137312.14	FLOT1	-635407	3.67e-08	0.476746	2e-07
breast cancer	6_30365728	rs3094054	ENSG00000181126.13	HLA-V	574774	3.05e-05	-0.693086	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204536.13	CCHCR1	-792510	3.15e-08	0.742396	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000137312.14	FLOT1	-377005	3.92e-11	0.689322	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000230795.3	HLA-K	438550	2.83e-08	-0.984064	1e-07
breast cancer	6_30374976	rs115707823	ENSG00000204536.13	CCHCR1	-783262	5.45e-05	0.482002	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000137312.14	FLOT1	-367757	2.04e-06	0.445314	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204536.13	CCHCR1	-783262	5.45e-05	0.482002	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000137312.14	FLOT1	-367757	2.04e-06	0.445314	5e-07
breast cancer	6_30473526	rs3132615	ENSG00000137312.14	FLOT1	-269207	1.02e-11	0.69952	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000181126.13	HLA-V	682572	2.69e-05	-0.68996	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000230795.3	HLA-K	546348	1.88e-07	-0.918498	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000239257.1	RPL23AP1	746644	0.00019126	-0.610287	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204536.13	CCHCR1	-684712	2.31e-08	0.740867	2e-06
breast cancer	6_30576624	rs3132610	ENSG00000230795.3	HLA-K	649446	1.75e-06	-0.828528	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204536.13	CCHCR1	-581614	3.19e-08	0.717429	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000137312.14	FLOT1	-166109	8.89e-13	0.713268	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000181126.13	HLA-V	785670	4.78e-05	-0.654196	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204516.9	MICB	-918257	8.41e-08	0.913075	1e-06
breast cancer	6_30682249	rs9262142	ENSG00000137312.14	FLOT1	-60484	4.6e-13	0.744717	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000181126.13	HLA-V	891295	2.85e-05	-0.694482	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204516.9	MICB	-812632	8.31e-08	0.943562	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204536.13	CCHCR1	-475989	1.36e-09	0.804868	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000230795.3	HLA-K	755071	7.35e-07	-0.884485	3e-06
breast cancer	6_30793795	rs3129984	ENSG00000230795.3	HLA-K	866617	4.39e-07	-0.897472	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204516.9	MICB	-701086	5.23e-08	0.953251	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204536.13	CCHCR1	-364443	4.44e-11	0.863481	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000137312.14	FLOT1	51062	2.59e-14	0.774707	8e-06
breast cancer	6_31347004	rs115392158	ENSG00000244731.7	C4A	-635020	9.67e-05	-0.418745	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000244731.7	C4A	-635020	9.67e-05	-0.418745	9e-06
breast cancer	6_32699696	rs147527678	ENSG00000244731.7	C4A	717672	3.57e-08	-0.595771	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000198502.5	HLA-DRB5	169409	7.94e-06	-0.506584	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000231852.6	CYP21A2	661431	6.24e-11	0.805772	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	7e-11	-0.667318	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000204338.8	CYP21A1P	694007	7.4e-07	-0.620995	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000244731.7	C4A	717672	3.57e-08	-0.595771	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000198502.5	HLA-DRB5	169409	7.94e-06	-0.506584	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000231852.6	CYP21A2	661431	6.24e-11	0.805772	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	7e-11	-0.667318	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000204338.8	CYP21A1P	694007	7.4e-07	-0.620995	6e-08
breast cancer	6_33272092	rs17215231	ENSG00000231500.6	RPS18	44	1.13e-26	-0.980219	9e-13
breast cancer	6_43259403	rs111342015	ENSG00000112667.12	DNPH1	29919	2.67e-05	-0.401006	9e-08
breast cancer	7_102478605	rs369574511	ENSG00000161036.12	LRWD1	13676	1.5e-19	-0.569955	2e-07
breast cancer	7_144351809	rs62485509	ENSG00000050327.14	ARHGEF5	-3479	5.46e-05	0.419764	4e-12
breast cancer	7_144377836	rs720475	ENSG00000050327.14	ARHGEF5	22548	1.66e-05	0.405816	4e-10
breast cancer	7_144377836	rs720475	ENSG00000050327.14	ARHGEF5	22548	1.66e-05	0.405816	7e-11
breast cancer	7_144377836	rs720475	ENSG00000050327.14	ARHGEF5	22548	1.66e-05	0.405816	1e-11
breast cancer	7_144377836	rs720475	ENSG00000050327.14	ARHGEF5	22548	1.66e-05	0.405816	1e-08
breast cancer	7_144377836	rs720475	ENSG00000050327.14	ARHGEF5	22548	1.66e-05	0.405816	7e-12
breast cancer	7_144377836	rs720475	ENSG00000050327.14	ARHGEF5	22548	1.66e-05	0.405816	2e-11
breast cancer	7_74696373	rs74910854	ENSG00000277053.4	GTF2IP1	-541323	3.72e-07	-0.616081	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000263001.5	GTF2I	38706	1.02e-05	0.264744	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000123965.13	PMS2P5	-197743	1.33e-08	0.819448	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000196275.13	GTF2IRD2	-155178	3.27e-10	0.832929	5e-06
breast cancer	7_92001306	rs6964587	ENSG00000127914.16	AKAP9	60439	1.29e-07	-0.199435	1e-06
breast cancer	7_92001306	rs6964587	ENSG00000127914.16	AKAP9	60439	1.29e-07	-0.199435	9e-11
breast cancer	7_92001306	rs6964587	ENSG00000127914.16	AKAP9	60439	1.29e-07	-0.199435	5e-07
breast cancer	7_92001306	rs6964587	ENSG00000127914.16	AKAP9	60439	1.29e-07	-0.199435	3e-12
breast cancer	8_103189173	rs12548629	ENSG00000266289.1	LINC02933	-194681	3.93e-07	0.400543	3e-07
breast cancer	8_17926905	rs11779988	ENSG00000104763.18	ASAH1	-158093	5.73e-12	0.433638	2e-06
breast cancer	8_17926905	rs11779988	ENSG00000078674.17	PCM1	4065	1.89e-30	-0.880747	2e-06
breast cancer	8_19828398	rs7017697	ENSG00000104613.11	INTS10	11258	2.07e-20	0.582061	1e-06
breast cancer	8_22634616	rs6558174	ENSG00000158941.16	CCAR2	29984	2.43e-06	0.233337	3e-06
breast cancer	9_103912867	rs718857	ENSG00000136824.18	SMC2	-181393	2.6e-15	-0.568205	2e-06
breast cancer	9_104094512	rs4742903	ENSG00000270332.1	SMC2-DT	1439	2.49e-05	0.321256	2e-07
breast cancer	9_104094512	rs4742903	ENSG00000136824.18	SMC2	252	1.33e-53	-0.892428	2e-07
breast cancer	9_104094512	rs4742903	ENSG00000270332.1	SMC2-DT	1439	2.49e-05	0.321256	3e-08
breast cancer	9_104094512	rs4742903	ENSG00000136824.18	SMC2	252	1.33e-53	-0.892428	3e-08
breast cancer	9_133463535	rs3124765	ENSG00000148290.9	SURF1	106859	2.38e-11	0.583368	2e-06