DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
breast cancer	1_113903258	rs7513707	ENSG00000116774.11	OLFML3	-76133	8.9e-05	-0.300726	2e-11
breast cancer	1_113905767	rs11552449	ENSG00000116774.11	OLFML3	-73624	8.9e-05	-0.301	1e-09
breast cancer	1_113905767	rs11552449	ENSG00000116774.11	OLFML3	-73624	8.9e-05	-0.301	5e-11
breast cancer	1_113905767	rs11552449	ENSG00000116774.11	OLFML3	-73624	8.9e-05	-0.301	2e-08
breast cancer	1_113905767	rs11552449	ENSG00000116774.11	OLFML3	-73624	8.9e-05	-0.301	3e-09
breast cancer	1_113905767	rs11552449	ENSG00000116774.11	OLFML3	-73624	8.9e-05	-0.301	6e-07
breast cancer	1_121121848	rs369304377	ENSG00000223345.3	H2BP1	4591	2.72e-11	0.612	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000226067.6	LINC00623	169409	1.71e-06	0.439	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000273136.6	NBPF26	397925	2.57e-05	0.32	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000270392.2	PFN1P2	687796	2.31e-06	0.439	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000270231.3	NBPF8	685495	1.19e-05	0.35	2e-29
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.83e-07	0.47	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	2.83e-07	0.463	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.04e-07	0.393	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.83e-07	0.47	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	2.83e-07	0.463	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.04e-07	0.393	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.83e-07	0.47	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	2.83e-07	0.462764	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.04e-07	0.393	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.83e-07	0.47	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	2.83e-07	0.463	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.04e-07	0.393	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.83e-07	0.47	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	2.83e-07	0.463	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.04e-07	0.393	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.83e-07	0.47	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	2.83e-07	0.463	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.04e-07	0.393	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.83e-07	0.47	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	2.83e-07	0.463	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.04e-07	0.393	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.83e-07	0.47	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	2.83e-07	0.463	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.04e-07	0.393	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.83e-07	0.47	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	2.83e-07	0.463	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.04e-07	0.393	2e-26
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	9.89e-08	0.489	6e-10
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	9.89e-08	0.489	2e-07
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	9.89e-08	0.489	5e-09
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	9.89e-08	0.489	8e-09
breast cancer	1_155176305	rs4971059	ENSG00000160766.14	GBAP1	-51117	7.03e-08	0.284	2e-10
breast cancer	1_155176305	rs4971059	ENSG00000160766.14	GBAP1	-51117	7.03e-08	0.284	5e-11
breast cancer	1_155212052	rs2974935	ENSG00000160766.14	GBAP1	-15370	8.17e-15	0.358	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000169231.13	THBS3	4071	4.03e-05	0.228	2e-07
breast cancer	1_155212373	rs2075570	ENSG00000160766.14	GBAP1	-15049	7.98e-15	0.358	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000169231.13	THBS3	4392	3.49e-05	0.229	5e-06
breast cancer	1_155216951	rs1057941	ENSG00000160766.14	GBAP1	-10471	8.98e-11	0.309	2e-07
breast cancer	1_155302483	rs7524950	ENSG00000160766.14	GBAP1	75061	6.38e-07	0.254	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000225855.6	RUSC1-AS1	-19204	6.72e-08	0.357	3e-09
breast cancer	1_155446537	rs10796944	ENSG00000225855.6	RUSC1-AS1	124850	6.35e-08	0.38	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000160766.14	GBAP1	219115	1.2e-05	0.24	7e-10
breast cancer	1_155587180	rs12091730	ENSG00000225855.6	RUSC1-AS1	265493	3.69e-07	0.366	2e-10
breast cancer	1_155697170	rs348196	ENSG00000225855.6	RUSC1-AS1	375483	1.71e-07	0.379	2e-08
breast cancer	1_16013277	rs1763604	ENSG00000186510.11	CLCNKA	-5598	1.44e-19	-0.757	7e-09
breast cancer	1_168127440	rs60504827	ENSG00000143199.17	ADCY10	213225	2.54e-08	0.552	2e-07
breast cancer	1_203832121	rs59867004	ENSG00000182004.12	SNRPE	-29482	7.37e-06	0.313	1e-10
breast cancer	1_91555907	rs12134245	ENSG00000097046.12	CDC7	55014	5.42e-12	-0.364	4e-06
breast cancer	10_102125800	rs10883710	ENSG00000214435.7	AS3MT	-743716	5.37e-05	0.346	3e-06
breast cancer	10_121904429	rs7899628	ENSG00000226864.2	ATE1-AS1	-23883	7.35e-14	-0.654	9e-10
breast cancer	10_5752689	rs55910451	ENSG00000057608.16	GDI2	-89443	5.39e-06	-0.246	4e-07
breast cancer	10_92172529	rs72807246	ENSG00000228701.1	TNKS2-DT	374238	3.91e-05	0.483	3e-06
breast cancer	11_111636465	rs505372	ENSG00000204381.11	LAYN	96185	2.9e-06	0.212	3e-06
breast cancer	11_111765903	rs643506	ENSG00000137713.15	PPP2R1B	-524	7.85e-13	-0.403	2e-07
breast cancer	11_120362917	rs7924772	ENSG00000181264.8	TLCD5	37788	7.32e-06	0.156	4e-08
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	5.82e-09	-0.399	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	5.82e-09	-0.399	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	5.82e-09	-0.399	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	5.82e-09	-0.399	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	5.82e-09	-0.399	2e-12
breast cancer	11_65935052	rs617791	ENSG00000175376.8	EIF1AD	-67026	5.44e-05	-0.241	7e-06
breast cancer	11_65935052	rs617791	ENSG00000172803.17	SNX32	101411	1.24e-11	-0.46	7e-06
breast cancer	11_66301747	rs1783730	ENSG00000174165.7	ZDHHC24	-244491	0.000137534	-0.299	3e-07
breast cancer	11_69138652	rs72932523	ENSG00000162341.16	TPCN2	89755	2.44e-09	0.512	1e-09
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	1.24e-28	0.746	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177666.16	PNPLA2	-15885	2.71e-14	-0.377	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	2.68e-11	0.253	3e-12
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	1.24e-28	0.746	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177666.16	PNPLA2	-15885	2.71e-14	-0.377	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	2.68e-11	0.253	1e-12
breast cancer	12_111621753	rs11065979	ENSG00000089022.13	MAPKAPK5	-221350	0.000112257	0.209	5e-06
breast cancer	14_67599772	rs7149859	ENSG00000100564.8	PIGH	-515	1.91e-15	-0.550463	7e-07
breast cancer	15_50402109	rs4774565	ENSG00000244879.6	GABPB1-AS1	46700	4.68e-10	-0.518	2e-06
breast cancer	15_74843920	rs6938	ENSG00000178802.17	MPI	-46085	1.14e-11	0.343	9e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	8.06e-12	0.333	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	8.06e-12	0.333	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	8.06e-12	0.333	4e-07
breast cancer	15_75516399	rs8027365	ENSG00000140400.16	MAN2C1	148245	3.49e-18	0.426	1e-07
breast cancer	15_90965985	rs77554484	ENSG00000166965.12	RCCD1	10189	1.71e-29	0.787	1e-15
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	1.36e-13	0.491714	4e-08
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	1.36e-13	0.492	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	1.36e-13	0.492	2e-19
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	3.2e-07	-0.169	3e-10
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	3.2e-07	-0.169	4e-08
breast cancer	16_56497273	rs2303282	ENSG00000125124.11	BBS2	-23010	4.19e-08	-0.185	3e-07
breast cancer	16_71475893	rs8050871	ENSG00000157429.15	ZNF19	-89196	8.94e-06	0.408	3e-06
breast cancer	17_45394123	rs4763	ENSG00000263503.1	MAPK8IP1P2	-208217	8.64e-20	0.999	2e-08
breast cancer	17_45394123	rs4763	ENSG00000204650.14	LINC02210	-226205	2.66e-20	0.544	2e-08
breast cancer	17_45394123	rs4763	ENSG00000262500.1	MAPK8IP1P1	-849483	9.81e-17	0.908	2e-08
breast cancer	17_45394123	rs4763	ENSG00000225190.10	PLEKHM1	-96626	1.72e-13	0.446	2e-08
breast cancer	17_45394123	rs4763	ENSG00000176681.14	LRRC37A	-898610	6.09e-11	0.716	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214425.7	LRRC37A4P	-156212	5.21e-32	-1.05	2e-08
breast cancer	17_45394123	rs4763	ENSG00000159314.11	ARHGAP27	-40298	2.8e-06	0.325	2e-08
breast cancer	17_45394123	rs4763	ENSG00000264070.1	DND1P1	-191748	3.6e-23	1.08	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214401.4	KANSL1-AS1	-799453	1.79e-28	1.02	2e-08
breast cancer	17_45941122	rs62061734	ENSG00000214425.7	LRRC37A4P	390787	1.34e-46	-1.16	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000263503.1	MAPK8IP1P2	338782	1.96e-33	1.19	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000159314.11	ARHGAP27	506701	2.38e-06	0.321	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000225190.10	PLEKHM1	450373	4.04e-14	0.448	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214401.4	KANSL1-AS1	-252454	1.54e-45	1.16	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000264070.1	DND1P1	355251	5.94e-32	1.19	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000262500.1	MAPK8IP1P1	-302484	2.91e-29	1.12	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000185829.17	ARL17A	-638560	4.4e-27	1.06	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000204650.14	LINC02210	320794	1.13e-26	0.595	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000238083.7	LRRC37A2	-570389	2.19e-38	1.18	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000176681.14	LRRC37A	-351611	8.22e-13	0.761	8e-12
breast cancer	17_46751565	rs199533	ENSG00000185829.17	ARL17A	171883	1.03e-24	1.01	5e-08
breast cancer	17_46751565	rs199533	ENSG00000176681.14	LRRC37A	458832	1.37e-13	0.775	5e-08
breast cancer	17_46751565	rs199533	ENSG00000238083.7	LRRC37A2	240054	2.3e-38	1.17	5e-08
breast cancer	17_46751565	rs199533	ENSG00000262500.1	MAPK8IP1P1	507959	4.99e-30	1.11	5e-08
breast cancer	17_46751565	rs199533	ENSG00000214401.4	KANSL1-AS1	557989	3.26e-48	1.16133	5e-08
breast cancer	17_46788237	rs199498	ENSG00000185829.17	ARL17A	208555	3.9e-20	0.915	2e-08
breast cancer	17_46788237	rs199498	ENSG00000214401.4	KANSL1-AS1	594661	8.02e-29	0.976	2e-08
breast cancer	17_46788237	rs199498	ENSG00000238083.7	LRRC37A2	276726	8.98e-25	0.989	2e-08
breast cancer	17_46788237	rs199498	ENSG00000262500.1	MAPK8IP1P1	544631	1.31e-17	0.888	2e-08
breast cancer	17_46788237	rs199498	ENSG00000176681.14	LRRC37A	495504	4.14e-09	0.623	2e-08
breast cancer	17_55132413	rs2787486	ENSG00000166263.13	STXBP4	163627	3.24e-06	-0.239	6e-29
breast cancer	17_55132413	rs2787486	ENSG00000166263.13	STXBP4	163627	3.24e-06	-0.239	2e-34
breast cancer	17_55135212	rs2628317	ENSG00000166263.13	STXBP4	166426	2.21e-05	-0.238	4e-16
breast cancer	17_68904663	rs36059695	ENSG00000141338.13	ABCA8	-50729	5.21e-10	0.963	6e-08
breast cancer	17_82597601	rs62079673	ENSG00000141580.15	WDR45B	-50952	6.19e-07	0.236	1e-06
breast cancer	17_82946434	rs898097	ENSG00000141560.14	FN3KRP	229751	5.99e-06	-0.372	2e-06
breast cancer	18_26920652	rs232320	ENSG00000260372.6	AQP4-AS1	264910	2.41e-06	-0.451	6e-09
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	5.41e-08	-0.378	1e-12
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	5.41e-08	-0.378	2e-06
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	5.41e-08	-0.378	9e-13
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	5.41e-08	-0.378	2e-09
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	5.41e-08	-0.378	7e-21
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	5.41e-08	-0.378	4e-13
breast cancer	19_17282085	rs8100241	ENSG00000130312.6	MRPL34	-10747	5.29e-07	0.29	4e-08
breast cancer	19_17283315	rs2363956	ENSG00000130312.6	MRPL34	-9517	1.4e-06	0.276	2e-06
breast cancer	19_17283315	rs2363956	ENSG00000130312.6	MRPL34	-9517	1.4e-06	0.276	2e-08
breast cancer	19_19417997	rs1469713	ENSG00000250067.11	YJEFN3	-111367	3.08e-05	-0.161	1e-10
breast cancer	19_19434887	rs2965183	ENSG00000250067.11	YJEFN3	-94477	3.08e-05	-0.161	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000250067.11	YJEFN3	-94477	3.08e-05	-0.161	1e-11
breast cancer	19_19535463	rs2304098	ENSG00000250067.11	YJEFN3	6099	2.24e-05	-0.163	2e-11
breast cancer	19_43779080	rs1685191	ENSG00000176222.8	ZNF404	-104971	5.53e-06	-0.231	4e-20
breast cancer	19_43779080	rs1685191	ENSG00000104783.11	KCNN4	-2177	4.71e-06	-0.343	4e-20
breast cancer	19_43782361	rs3760982	ENSG00000104783.11	KCNN4	1104	4.98e-05	-0.315	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	2.54e-08	-0.213	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.47e-10	-0.325	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000104783.11	KCNN4	1104	4.98e-05	-0.315	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	2.54e-08	-0.213	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.47e-10	-0.325	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000104783.11	KCNN4	1104	4.98e-05	-0.315	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	2.54e-08	-0.213	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.47e-10	-0.325	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000104783.11	KCNN4	1104	4.98e-05	-0.315	2e-14
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	2.54e-08	-0.213	2e-14
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.47e-10	-0.325	2e-14
breast cancer	19_43782361	rs3760982	ENSG00000104783.11	KCNN4	1104	4.98e-05	-0.315	1e-16
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	2.54e-08	-0.213	1e-16
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.47e-10	-0.325	1e-16
breast cancer	19_43782361	rs3760982	ENSG00000104783.11	KCNN4	1104	4.98e-05	-0.315	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	2.54e-08	-0.213	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.47e-10	-0.325	9e-07
breast cancer	19_43919418	rs375066	ENSG00000176222.8	ZNF404	35367	1.73e-19	-0.428	2e-14
breast cancer	19_43919418	rs375066	ENSG00000124459.11	ZNF45	-15860	2.77e-07	-0.383	2e-14
breast cancer	19_51869723	rs10411161	ENSG00000161551.14	ZNF577	-18253	3.37e-07	-0.438	7e-06
breast cancer	19_51942133	rs8113308	ENSG00000269235.1	ZNF350-AS1	-7001	1.99e-16	0.903	6e-07
breast cancer	2_201258707	rs3769821	ENSG00000155749.12	FLACC1	-98691	1.68e-18	-0.608	4e-18
breast cancer	2_201258707	rs3769821	ENSG00000064012.21	CASP8	25264	2.08e-15	-0.625	4e-18
breast cancer	2_201279205	rs10931936	ENSG00000155749.12	FLACC1	-78193	6.55e-16	-0.628	6e-06
breast cancer	2_201279205	rs10931936	ENSG00000064012.21	CASP8	45762	2.85e-24	-0.835	6e-06
breast cancer	2_201288355	rs1035142	ENSG00000064012.21	CASP8	54912	3.44e-19	-0.712	3e-09
breast cancer	2_201288355	rs1035142	ENSG00000155749.12	FLACC1	-69043	6.49e-26	-0.72	3e-09
breast cancer	2_201288502	rs700635	ENSG00000064012.21	CASP8	55059	4.24e-26	-0.864	5e-16
breast cancer	2_201288502	rs700635	ENSG00000155749.12	FLACC1	-68896	1.35e-16	-0.644	5e-16
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	4.29e-26	-0.867	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.79e-16	-0.644	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	4.29e-26	-0.867	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.79e-16	-0.644	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	4.29e-26	-0.867	6e-24
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.79e-16	-0.644	6e-24
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	4.29e-26	-0.867	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.79e-16	-0.644	9e-14
breast cancer	2_201384985	rs2714486	ENSG00000155749.12	FLACC1	27587	2.66e-09	0.63	7e-10
breast cancer	2_201384985	rs2714486	ENSG00000064012.21	CASP8	151542	4.87e-09	0.691	7e-10
breast cancer	2_201502866	rs77688320	ENSG00000155749.12	FLACC1	145468	6.91e-07	0.571	3e-09
breast cancer	2_201502866	rs77688320	ENSG00000064012.21	CASP8	269423	8.24e-07	0.631995	3e-09
breast cancer	2_24906604	rs6725517	ENSG00000138031.14	ADCY3	-13235	1.17e-08	-0.256	3e-12
breast cancer	2_24906604	rs6725517	ENSG00000138031.14	ADCY3	-13235	1.17e-08	-0.256	5e-11
breast cancer	2_25068670	rs1971136	ENSG00000138031.14	ADCY3	148831	1.37e-09	0.28	5e-09
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	4.96e-05	0.347	3e-06
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	4.96e-05	0.347	5e-09
breast cancer	2_69900097	rs6716937	ENSG00000124380.10	SNRNP27	6537	1.06e-13	-0.346	4e-07
breast cancer	2_69900097	rs6716937	ENSG00000087338.4	GMCL1	70455	1.87e-08	-0.304	4e-07
breast cancer	20_34000289	rs2284378	ENSG00000078747.14	ITCH	-362946	8.7e-05	0.145	1e-08
breast cancer	20_34000289	rs2284378	ENSG00000101460.12	MAP1LC3A	-546565	2.02e-05	0.152	1e-08
breast cancer	20_34002002	rs2300206	ENSG00000078747.14	ITCH	-361233	8.7e-05	0.145	6e-06
breast cancer	20_34002002	rs2300206	ENSG00000101460.12	MAP1LC3A	-544852	2.02e-05	0.152	6e-06
breast cancer	20_34002002	rs2300206	ENSG00000078747.14	ITCH	-361233	8.7e-05	0.145	2e-08
breast cancer	20_34002002	rs2300206	ENSG00000101460.12	MAP1LC3A	-544852	2.02e-05	0.152	2e-08
breast cancer	20_34131991	rs11907546	ENSG00000101460.12	MAP1LC3A	-414863	3.79e-05	0.149	3e-09
breast cancer	20_34131991	rs11907546	ENSG00000078747.14	ITCH	-231244	3.15e-05	0.155	3e-09
breast cancer	20_34131991	rs11907546	ENSG00000101460.12	MAP1LC3A	-414863	3.79e-05	0.149	3e-06
breast cancer	20_34131991	rs11907546	ENSG00000078747.14	ITCH	-231244	3.15e-05	0.155	3e-06
breast cancer	20_39051206	rs742276	ENSG00000101452.14	DHX35	88907	3.94e-05	-0.264	9e-06
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	8.65e-14	-1.20016	6e-09
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	8.65e-14	-1.2	4e-07
breast cancer	3_100004736	rs9833888	ENSG00000184220.11	CMSS1	186902	2.62e-05	0.188	3e-10
breast cancer	3_100004736	rs9833888	ENSG00000184220.11	CMSS1	186902	2.62e-05	0.188	5e-10
breast cancer	3_100105841	rs9837602	ENSG00000184220.11	CMSS1	288007	2.62e-05	0.188	1e-09
breast cancer	4_105435604	rs77928427	ENSG00000138777.19	PPA2	-38477	3.15e-06	-0.339	3e-08
breast cancer	4_88322666	rs10022462	ENSG00000246375.2	PPM1K-DT	37724	1.07e-05	0.459285	2e-09
breast cancer	4_88322666	rs10022462	ENSG00000246375.2	PPM1K-DT	37724	1.07e-05	0.459	3e-10
breast cancer	5_128098106	rs1112956	ENSG00000245937.7	SLC12A2-DT	14934	9.22e-06	0.336	9e-06
breast cancer	5_132304843	rs6860806	ENSG00000131435.12	PDLIM4	47172	1.11e-09	-0.27	3e-08
breast cancer	5_132304843	rs6860806	ENSG00000131435.12	PDLIM4	47172	1.11e-09	-0.27	8e-08
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	9.88e-06	-0.276	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000131435.12	PDLIM4	208584	9.21e-05	0.18	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	1.69e-06	-0.462	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	9.88e-06	-0.276	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000131435.12	PDLIM4	208584	9.21e-05	0.18	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	1.69e-06	-0.462	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	9.88e-06	-0.276	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000131435.12	PDLIM4	208584	9.21e-05	0.18	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	1.69e-06	-0.462	9e-08
breast cancer	5_132497907	rs736801	ENSG00000197536.11	IRF1-AS1	87271	3.35e-06	0.293	8e-08
breast cancer	5_133071366	rs6596100	ENSG00000170606.14	HSPA4	19404	3.73e-11	0.328	2e-08
breast cancer	5_133071366	rs6596100	ENSG00000170606.14	HSPA4	19404	3.73e-11	0.328	8e-09
breast cancer	5_44663035	rs7701466	ENSG00000249203.1	LINC02224	152753	0.000123686	-0.322	2e-10
breast cancer	5_44672840	rs55788307	ENSG00000249203.1	LINC02224	162558	2.29e-05	-0.355	4e-14
breast cancer	5_44701316	rs714130	ENSG00000251141.5	MRPS30-DT	-107461	0.000133563	0.223	7e-09
breast cancer	5_44701316	rs714130	ENSG00000249203.1	LINC02224	191034	0.000127721	-0.317	7e-09
breast cancer	5_44926416	rs10043344	ENSG00000251141.5	MRPS30-DT	117639	9.45e-05	-0.24	5e-10
breast cancer	5_44926416	rs10043344	ENSG00000249203.1	LINC02224	416134	6.27e-05	0.35	5e-10
breast cancer	5_56737113	rs1862626	ENSG00000155542.11	SETD9	-172147	6.63e-05	0.378	4e-12
breast cancer	5_56977866	rs10036895	ENSG00000155542.11	SETD9	68606	2.48e-08	0.495	2e-12
breast cancer	5_81972251	rs111549985	ENSG00000186468.12	RPS23	-306326	4.13e-30	-0.849	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000152348.15	ATG10	226	5.39e-21	0.94	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000205464.11	ATP6AP1L	-307211	8.38e-19	0.68	6e-12
breast cancer	5_82161539	rs2407064	ENSG00000152348.15	ATG10	189514	1.25e-20	-0.905	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000186468.12	RPS23	-117038	4.21e-34	0.858	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000205464.11	ATP6AP1L	-117923	2.37e-22	-0.708	3e-08
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	6.31e-24	-0.755	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.17e-20	-0.94	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	4.62e-37	0.915	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	6.31e-24	-0.755	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.17e-20	-0.94	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	4.62e-37	0.915	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	6.31e-24	-0.755	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.17e-20	-0.94	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	4.62e-37	0.915	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	6.31e-24	-0.755	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.17e-20	-0.94	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	4.62e-37	0.915	4e-09
breast cancer	5_82340549	rs2407156	ENSG00000186468.12	RPS23	61972	9.7e-27	-0.762	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000152348.15	ATG10	368524	3.82e-11	0.659	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000205464.11	ATP6AP1L	61087	1.95e-18	0.631	2e-06
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.52e-09	-0.541	2e-12
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.52e-09	-0.541	3e-12
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.52e-09	-0.541	4e-08
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.52e-09	-0.541	8e-10
breast cancer	6_25710343	rs68006638	ENSG00000186470.13	BTN3A2	-654816	1.25e-08	-0.945	2e-07
breast cancer	6_25874195	rs13198474	ENSG00000186470.13	BTN3A2	-490964	1.8e-09	-1.02	2e-07
breast cancer	6_26175638	rs17598658	ENSG00000186470.13	BTN3A2	-189521	2.32e-14	-1.07	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000186470.13	BTN3A2	98187	1.04e-13	-0.974	2e-09
breast cancer	6_26993501	rs34546498	ENSG00000186470.13	BTN3A2	628342	1.04e-13	-0.974	9e-10
breast cancer	6_27307055	rs56114371	ENSG00000186470.13	BTN3A2	941896	1.04e-13	-0.974	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000216901.1	ZNF603P	-869133	1.1e-06	0.891	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000226314.7	ZKSCAN8P1	-854726	0.000123894	0.599	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000137185.11	ZSCAN9	-917831	0.000177151	0.446	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000219392.1	ZNF602P	-808573	8.39e-06	-0.731	2e-09
breast cancer	6_27457865	rs34196306	ENSG00000216901.1	ZNF603P	-718323	4.91e-07	0.953	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000219392.1	ZNF602P	-657763	1.29e-07	-0.889	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000226314.7	ZKSCAN8P1	-703916	0.000199649	0.604	1e-09
breast cancer	6_27873148	rs45509595	ENSG00000219392.1	ZNF602P	-242480	4.31e-07	-0.821	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000226314.7	ZKSCAN8P1	-288633	5.12e-05	0.63	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000216901.1	ZNF603P	-303040	1.22e-07	0.96	5e-09
breast cancer	6_28106103	rs34662244	ENSG00000216901.1	ZNF603P	-70085	7.67e-08	0.967	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000226314.7	ZKSCAN8P1	-55678	3.17e-05	0.641	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000219392.1	ZNF602P	-9525	9.67e-07	-0.791	3e-09
breast cancer	6_28364364	rs13214023	ENSG00000226314.7	ZKSCAN8P1	202583	3.17e-05	0.641	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000216901.1	ZNF603P	188176	7.67e-08	0.967	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000219392.1	ZNF602P	248736	9.67e-07	-0.791	1e-09
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	8.9e-06	0.419	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000137185.11	ZSCAN9	733557	0.000269377	-0.227	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	8.9e-06	0.419	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000137185.11	ZSCAN9	733557	0.000269377	-0.227	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	8.9e-06	0.419	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000137185.11	ZSCAN9	733557	0.000269377	-0.227	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	8.9e-06	0.419	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000137185.11	ZSCAN9	733557	0.000269377	-0.227	3e-07
breast cancer	6_29280372	rs3130834	ENSG00000270604.5	HCG17	-974092	9.37e-05	-0.682	5e-09
breast cancer	6_29693039	rs3116813	ENSG00000230795.3	HLA-K	-234139	8.83e-06	-0.804	6e-07
breast cancer	6_29785031	rs147680653	ENSG00000137312.14	FLOT1	-957702	3.89e-06	0.375	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000230795.3	HLA-K	-142147	2.91e-05	-0.751	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000270604.5	HCG17	-469433	0.000120685	-0.636	1e-06
breast cancer	6_29882943	rs1611579	ENSG00000230795.3	HLA-K	-44235	1.07e-05	-0.769	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000270604.5	HCG17	-371521	7.93e-05	-0.635	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000137312.14	FLOT1	-859790	2.64e-06	0.371302	8e-07
breast cancer	6_30003183	rs3094146	ENSG00000230795.3	HLA-K	76005	4.51e-05	-0.714516	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000137312.14	FLOT1	-739550	8.99e-06	0.351557	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000270604.5	HCG17	-251281	2.63e-05	-0.6734	7e-07
breast cancer	6_30365728	rs3094054	ENSG00000270604.5	HCG17	111264	1.45e-05	-0.688138	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000230795.3	HLA-K	438550	1.58e-05	-0.748201	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000137312.14	FLOT1	-377005	3.71e-08	0.425754	1e-07
breast cancer	6_30374976	rs115707823	ENSG00000270604.5	HCG17	120512	5.14e-06	-0.615669	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000270604.5	HCG17	120512	5.14e-06	-0.616	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000137312.14	FLOT1	-269207	3.53e-07	0.394	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000270604.5	HCG17	219062	1.72e-05	-0.678	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000230795.3	HLA-K	546348	2.28e-05	-0.729	2e-06
breast cancer	6_30576624	rs3132610	ENSG00000204525.16	HLA-C	-695481	9.6e-05	0.473	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000270604.5	HCG17	322160	4.36e-05	-0.645	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000137312.14	FLOT1	-166109	2.84e-08	0.425	1e-06
breast cancer	6_30682249	rs9262142	ENSG00000270604.5	HCG17	427785	2.01e-05	-0.679	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000230795.3	HLA-K	755071	0.000110206	-0.676	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000137312.14	FLOT1	-60484	2.47e-08	0.432	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204516.9	MICB	-812632	9.92e-05	0.529	3e-06
breast cancer	6_30793795	rs3129984	ENSG00000204525.16	HLA-C	-478310	8.06e-05	0.48	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000137312.14	FLOT1	51062	2.14e-06	0.369	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000270604.5	HCG17	539331	3.95e-05	-0.651	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000230795.3	HLA-K	866617	2.68e-05	-0.726	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204516.9	MICB	-701086	4.6e-05	0.548	8e-06
breast cancer	6_31347004	rs115392158	ENSG00000204540.10	PSORS1C1	232254	5.41e-05	-0.449	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204540.10	PSORS1C1	232254	5.41e-05	-0.449	3e-07
breast cancer	6_32699696	rs147527678	ENSG00000231852.6	CYP21A2	661431	8.04e-08	0.512	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000231852.6	CYP21A2	661431	8.04e-08	0.512	6e-08
breast cancer	6_33272092	rs17215231	ENSG00000231500.6	RPS18	44	3.44e-23	-0.675	9e-13
breast cancer	7_100437651	rs117911427	ENSG00000242294.6	STAG3L5P	101239	2.12e-05	0.927	7e-06
breast cancer	7_100437651	rs117911427	ENSG00000121716.20	PILRB	85475	4.02e-05	1.02	7e-06
breast cancer	7_100437651	rs117911427	ENSG00000085514.15	PILRA	64206	1.94e-06	1.42	7e-06
breast cancer	7_102478605	rs369574511	ENSG00000161036.12	LRWD1	13676	9.03e-07	-0.196	2e-07
breast cancer	7_74696373	rs74910854	ENSG00000123965.13	PMS2P5	-197743	1.49e-08	0.947	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000196275.13	GTF2IRD2	-155178	4.37e-13	0.914	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000277053.4	GTF2IP1	-541323	1.14e-05	-0.659	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000263001.5	GTF2I	38706	1.23e-07	0.56	5e-06
breast cancer	8_17926905	rs11779988	ENSG00000078674.17	PCM1	4065	1.52e-34	-0.879	2e-06
breast cancer	8_22634616	rs6558174	ENSG00000120913.23	PDLIM2	56337	1.18e-05	-0.212	3e-06
breast cancer	9_103912867	rs718857	ENSG00000136824.18	SMC2	-181393	6.96e-10	-0.42	2e-06
breast cancer	9_104094512	rs4742903	ENSG00000136824.18	SMC2	252	2.53e-37	-0.745	2e-07
breast cancer	9_104094512	rs4742903	ENSG00000136824.18	SMC2	252	2.53e-37	-0.745	3e-08
breast cancer	9_133463535	rs3124765	ENSG00000148290.9	SURF1	106859	5.83e-10	0.584	2e-06