DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE breast cancer 1_100414772 rs612683 ENSG00000079335.18 CDC14A 63038 3.66e-05 -0.109757 3e-07 breast cancer 1_10506158 rs616488 ENSG00000142655.12 PEX14 31271 1.21e-06 -0.126916 5e-20 breast cancer 1_10506158 rs616488 ENSG00000160049.11 DFFA 33632 5.67e-05 -0.124776 5e-20 breast cancer 1_10506158 rs616488 ENSG00000142655.12 PEX14 31271 1.21e-06 -0.126916 9e-09 breast cancer 1_10506158 rs616488 ENSG00000160049.11 DFFA 33632 5.67e-05 -0.124776 9e-09 breast cancer 1_10506158 rs616488 ENSG00000142655.12 PEX14 31271 1.21e-06 -0.126916 1e-08 breast cancer 1_10506158 rs616488 ENSG00000160049.11 DFFA 33632 5.67e-05 -0.124776 1e-08 breast cancer 1_10506158 rs616488 ENSG00000142655.12 PEX14 31271 1.21e-06 -0.126916 4e-11 breast cancer 1_10506158 rs616488 ENSG00000160049.11 DFFA 33632 5.67e-05 -0.124776 4e-11 breast cancer 1_10506158 rs616488 ENSG00000142655.12 PEX14 31271 1.21e-06 -0.126916 2e-23 breast cancer 1_10506158 rs616488 ENSG00000160049.11 DFFA 33632 5.67e-05 -0.124776 2e-23 breast cancer 1_10506158 rs616488 ENSG00000142655.12 PEX14 31271 1.21e-06 -0.126916 2e-10 breast cancer 1_10506158 rs616488 ENSG00000160049.11 DFFA 33632 5.67e-05 -0.124776 2e-10 breast cancer 1_10506158 rs616488 ENSG00000142655.12 PEX14 31271 1.21e-06 -0.126916 4e-18 breast cancer 1_10506158 rs616488 ENSG00000160049.11 DFFA 33632 5.67e-05 -0.124776 4e-18 breast cancer 1_10535965 rs2506889 ENSG00000142655.12 PEX14 61078 1.41e-08 -0.154003 2e-20 breast cancer 1_10535965 rs2506889 ENSG00000160049.11 DFFA 63439 2.08e-05 -0.137505 2e-20 breast cancer 1_10536284 rs12375 ENSG00000142655.12 PEX14 61397 1.41e-08 -0.154003 1e-05 breast cancer 1_10536284 rs12375 ENSG00000160049.11 DFFA 63758 2.08e-05 -0.137505 1e-05 breast cancer 1_109637134 rs17024629 ENSG00000168765.16 GSTM4 -18947 9.88e-08 0.249888 3e-08 breast cancer 1_109637134 rs17024629 ENSG00000168765.16 GSTM4 -18947 9.88e-08 0.249888 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000168765.16 GSTM4 -18947 9.88e-08 0.249888 1e-06 breast cancer 1_113630788 rs1230666 ENSG00000226167.1 AP4B1-AS1 -225847 0.000108325 0.203661 4e-10 breast cancer 1_113903258 rs7513707 ENSG00000226167.1 AP4B1-AS1 46623 8.73e-06 -0.189784 2e-11 breast cancer 1_113905767 rs11552449 ENSG00000226167.1 AP4B1-AS1 49132 9.61e-06 -0.189403 1e-09 breast cancer 1_113905767 rs11552449 ENSG00000226167.1 AP4B1-AS1 49132 9.61e-06 -0.189403 6e-07 breast cancer 1_113905767 rs11552449 ENSG00000226167.1 AP4B1-AS1 49132 9.61e-06 -0.189403 3e-09 breast cancer 1_113905767 rs11552449 ENSG00000226167.1 AP4B1-AS1 49132 9.61e-06 -0.189403 5e-11 breast cancer 1_113905767 rs11552449 ENSG00000226167.1 AP4B1-AS1 49132 9.61e-06 -0.189403 2e-08 breast cancer 1_121121848 rs369304377 ENSG00000270231.3 NBPF8 685495 1.14e-21 0.496186 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000270392.2 PFN1P2 687796 3.83e-12 0.382759 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000273136.6 NBPF26 397925 1.04e-10 0.424772 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000171943.11 SRGAP2C -62962 3.46e-09 -0.174691 2e-29 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 9.84e-08 -0.157092 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 4.02e-10 0.40883 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 0.000389328 -0.149051 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 9.84e-08 -0.157092 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 4.02e-10 0.40883 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 0.000389328 -0.149051 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 9.84e-08 -0.157092 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 4.02e-10 0.40883 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 0.000389328 -0.149051 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 9.84e-08 -0.157092 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 4.02e-10 0.40883 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 0.000389328 -0.149051 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 9.84e-08 -0.157092 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 4.02e-10 0.40883 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 0.000389328 -0.149051 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 9.84e-08 -0.157092 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 4.02e-10 0.40883 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 0.000389328 -0.149051 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 9.84e-08 -0.157092 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 4.02e-10 0.40883 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 0.000389328 -0.149051 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 9.84e-08 -0.157092 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 4.02e-10 0.40883 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 0.000389328 -0.149051 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 9.84e-08 -0.157092 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 4.02e-10 0.40883 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 0.000389328 -0.149051 8e-54 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 4.01e-09 0.302562 6e-10 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 4.01e-09 0.302562 8e-09 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 4.01e-09 0.302562 5e-09 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 4.01e-09 0.302562 2e-07 breast cancer 1_155176305 rs4971059 ENSG00000160766.14 GBAP1 -51117 4.81e-06 -0.150117 5e-11 breast cancer 1_155176305 rs4971059 ENSG00000160766.14 GBAP1 -51117 4.81e-06 -0.150117 2e-10 breast cancer 1_155212052 rs2974935 ENSG00000225855.6 RUSC1-AS1 -109635 3.4e-05 0.136791 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000169231.13 THBS3 4071 9.15e-11 0.166477 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000177628.15 GBA -32647 1.06e-07 -0.121508 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000160766.14 GBAP1 -15370 4.48e-18 -0.240525 2e-07 breast cancer 1_155212373 rs2075570 ENSG00000169231.13 THBS3 4392 1.35e-10 0.164691 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000177628.15 GBA -32326 2.64e-07 -0.117529 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000160766.14 GBAP1 -15049 3.35e-18 -0.240857 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000225855.6 RUSC1-AS1 -109314 2.82e-05 0.137899 5e-06 breast cancer 1_155216951 rs1057941 ENSG00000177628.15 GBA -27748 0.00011982 -0.0921638 2e-07 breast cancer 1_155216951 rs1057941 ENSG00000160766.14 GBAP1 -10471 2.89e-08 -0.164511 2e-07 breast cancer 1_155302483 rs7524950 ENSG00000116539.12 ASH1L -260324 3.9e-06 0.11788 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000160766.14 GBAP1 75061 9.85e-07 -0.153162 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000203761.5 MSTO2P -443346 0.000100893 -0.125807 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000169231.13 THBS3 94502 4.66e-07 0.142907 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000225855.6 RUSC1-AS1 -19204 2.82e-08 0.198525 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000143622.10 RIT1 -608921 2.27e-05 -0.141393 3e-09 breast cancer 1_155446537 rs10796944 ENSG00000143622.10 RIT1 -464867 9.18e-06 -0.166105 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000116539.12 ASH1L -116270 4.51e-08 0.156047 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000225855.6 RUSC1-AS1 124850 6.13e-07 0.201046 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000203761.5 MSTO2P -299292 1.38e-05 -0.157637 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000160766.14 GBAP1 219115 2.12e-05 -0.149998 7e-10 breast cancer 1_155587180 rs12091730 ENSG00000116539.12 ASH1L 24373 1.21e-08 0.162152 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000225855.6 RUSC1-AS1 265493 5.65e-06 0.183291 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000203761.5 MSTO2P -158649 1.21e-06 -0.17534 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000160766.14 GBAP1 359758 7.43e-06 -0.157734 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000143622.10 RIT1 -324224 7.86e-06 -0.167161 2e-10 breast cancer 1_155697170 rs348196 ENSG00000225855.6 RUSC1-AS1 375483 3.22e-05 0.163318 2e-08 breast cancer 1_155697170 rs348196 ENSG00000203761.5 MSTO2P -48659 9.85e-09 -0.199882 2e-08 breast cancer 1_155697170 rs348196 ENSG00000143622.10 RIT1 -214234 7.89e-07 -0.178829 2e-08 breast cancer 1_155697170 rs348196 ENSG00000116539.12 ASH1L 134363 4.37e-09 0.16196 2e-08 breast cancer 1_156183252 rs11264454 ENSG00000196189.12 SEMA4A 35886 1.21e-07 0.173907 2e-08 breast cancer 1_156183252 rs11264454 ENSG00000196189.12 SEMA4A 35886 1.21e-07 0.173907 7e-07 breast cancer 1_168127440 rs60504827 ENSG00000143158.10 MPC2 190400 8.11e-07 -0.150969 2e-07 breast cancer 1_207903511 rs2724379 ENSG00000284237.1 LINC02767 -55781 9.16e-21 -0.339992 2e-07 breast cancer 1_213369363 rs17020562 ENSG00000117697.14 NSL1 577581 4.19e-05 0.416786 7e-08 breast cancer 1_213369363 rs17020562 ENSG00000117697.14 NSL1 577581 4.19e-05 0.416786 3e-07 breast cancer 1_45918469 rs12077974 ENSG00000234329.1 RPL7AP16 266643 2.49e-05 0.170578 2e-07 breast cancer 1_45918469 rs12077974 ENSG00000086015.20 MAST2 131482 9.3e-05 -0.1146 2e-07 breast cancer 1_45918469 rs12077974 ENSG00000171357.5 LURAP1 -284865 2.94e-08 0.232915 2e-07 breast cancer 1_45918469 rs12077974 ENSG00000159588.14 CCDC17 294412 2.78e-07 -0.23106 2e-07 breast cancer 1_46135245 rs1707302 ENSG00000171357.5 LURAP1 -68089 4.2e-10 -0.258305 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000280670.2 CCDC163 635193 4.85e-05 -0.239134 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000159588.14 CCDC17 511188 1.71e-05 0.192316 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000086015.20 MAST2 348258 7.76e-06 0.129369 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000171357.5 LURAP1 -68089 4.2e-10 -0.258305 3e-08 breast cancer 1_46135245 rs1707302 ENSG00000280670.2 CCDC163 635193 4.85e-05 -0.239134 3e-08 breast cancer 1_46135245 rs1707302 ENSG00000159588.14 CCDC17 511188 1.71e-05 0.192316 3e-08 breast cancer 1_46135245 rs1707302 ENSG00000086015.20 MAST2 348258 7.76e-06 0.129369 3e-08 breast cancer 1_8326670 rs9628987; rs7535752 ENSG00000142599.17 RERE -490973 9.89e-08 -0.204678 5e-06 breast cancer 1_91555907 rs12134245 ENSG00000097046.12 CDC7 55014 1.13e-15 -0.256959 4e-06 breast cancer 10_121865675 rs10510102 ENSG00000226864.2 ATE1-AS1 -62637 3.59e-08 0.398141 2e-06 breast cancer 10_121904429 rs7899628 ENSG00000226864.2 ATE1-AS1 -23883 2.1e-19 -0.497156 9e-10 breast cancer 10_27080233 rs7918232 ENSG00000120539.14 MASTL -75034 1.39e-12 0.363154 8e-06 breast cancer 10_5752689 rs55910451 ENSG00000057608.16 GDI2 -89443 3.57e-24 -0.260181 4e-07 breast cancer 10_92172529 rs72807246 ENSG00000228701.1 TNKS2-DT 374238 4.44e-07 0.476248 3e-06 breast cancer 11_111765903 rs643506 ENSG00000137713.15 PPP2R1B -524 1.52e-10 -0.197208 2e-07 breast cancer 11_120362917 rs7924772 ENSG00000181264.8 TLCD5 37788 2.01e-18 0.215415 4e-08 breast cancer 11_1871355 rs4980389 ENSG00000226416.1 MRPL23-AS1 -118565 7.96e-07 0.270663 4e-07 breast cancer 11_1874478 rs4980386 ENSG00000226416.1 MRPL23-AS1 -115442 6.81e-07 0.271575 9e-17 breast cancer 11_1877434 rs1973765 ENSG00000226416.1 MRPL23-AS1 -112486 2.36e-06 0.254864 1e-37 breast cancer 11_1880867 rs4980383 ENSG00000226416.1 MRPL23-AS1 -109053 2.16e-05 -0.239356 3e-06 breast cancer 11_1880867 rs4980383 ENSG00000226416.1 MRPL23-AS1 -109053 2.16e-05 -0.239356 9e-09 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 7.07e-07 -0.286558 1e-18 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 7.07e-07 -0.286558 6e-21 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 7.07e-07 -0.286558 2e-13 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 7.07e-07 -0.286558 1e-10 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 7.07e-07 -0.286558 3e-09 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 7.07e-07 -0.286558 2e-11 breast cancer 11_1892909 rs576603 ENSG00000226416.1 MRPL23-AS1 -97011 1.45e-06 0.257976 2e-08 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 5.59e-14 0.287481 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000175334.7 BANF1 -186582 5.38e-09 0.131022 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 3.89e-14 -0.420639 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172638.12 EFEMP2 -57997 1.16e-05 -0.0996485 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 5.59e-14 0.287481 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000175334.7 BANF1 -186582 5.38e-09 0.131022 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 3.89e-14 -0.420639 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172638.12 EFEMP2 -57997 1.16e-05 -0.0996485 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 5.59e-14 0.287481 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000175334.7 BANF1 -186582 5.38e-09 0.131022 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 3.89e-14 -0.420639 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172638.12 EFEMP2 -57997 1.16e-05 -0.0996485 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 5.59e-14 0.287481 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000175334.7 BANF1 -186582 5.38e-09 0.131022 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 3.89e-14 -0.420639 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172638.12 EFEMP2 -57997 1.16e-05 -0.0996485 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 5.59e-14 0.287481 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000175334.7 BANF1 -186582 5.38e-09 0.131022 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 3.89e-14 -0.420639 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172638.12 EFEMP2 -57997 1.16e-05 -0.0996485 9e-12 breast cancer 11_65935052 rs617791 ENSG00000172803.17 SNX32 101411 4.04e-11 -0.375932 7e-06 breast cancer 11_65935052 rs617791 ENSG00000172543.7 CTSW 55243 1e-06 0.193767 7e-06 breast cancer 11_65935052 rs617791 ENSG00000175334.7 BANF1 -67125 6.08e-12 0.15553 7e-06 breast cancer 11_66843174 rs7570 ENSG00000173621.8 LRFN4 -13473 1.16e-06 -0.180264 8e-06 breast cancer 11_66843174 rs7570 ENSG00000174684.6 B4GAT1 495482 2.59e-07 -0.132763 8e-06 breast cancer 11_66843174 rs7570 ENSG00000174080.10 CTSF 274333 1.66e-05 0.125384 8e-06 breast cancer 11_69138652 rs72932523 ENSG00000162341.16 TPCN2 89755 6.87e-08 0.368604 1e-09 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 4.29e-47 0.485543 3e-12 breast cancer 11_803017 rs6597981 ENSG00000177595.17 PIDD1 -6629 9.22e-30 0.310394 3e-12 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 4.29e-47 0.485543 1e-12 breast cancer 11_803017 rs6597981 ENSG00000177595.17 PIDD1 -6629 9.22e-30 0.310394 1e-12 breast cancer 12_120997672 rs2464195 ENSG00000157895.11 C12orf43 -18830 4.53e-09 -0.223151 3e-08 breast cancer 12_29205522 rs7315643 ENSG00000064763.10 FAR2 56419 8.12e-06 -0.189583 2e-07 breast cancer 14_67599772 rs7149859 ENSG00000054690.13 PLEKHH1 66471 9.3e-06 -0.142253 7e-07 breast cancer 14_87829256 rs4322600 ENSG00000100722.18 ZC3H14 -733653 7.37e-05 -0.138829 4e-06 breast cancer 15_50402109 rs4774565 ENSG00000244879.6 GABPB1-AS1 46700 5.87e-19 -0.551633 2e-06 breast cancer 15_74300521 rs12904134 ENSG00000140465.13 CYP1A1 -425089 2.43e-06 -0.296012 8e-06 breast cancer 15_74300521 rs12904134 ENSG00000140474.12 ULK3 -542676 1.77e-06 -0.167174 8e-06 breast cancer 15_74300521 rs12904134 ENSG00000178802.17 MPI -589484 3.2e-05 0.135469 8e-06 breast cancer 15_74843920 rs6938 ENSG00000140465.13 CYP1A1 118310 3.6e-06 -0.301234 9e-08 breast cancer 15_74843920 rs6938 ENSG00000178802.17 MPI -46085 7.22e-13 0.236792 9e-08 breast cancer 15_74843920 rs6938 ENSG00000140474.12 ULK3 723 6.13e-17 -0.294163 9e-08 breast cancer 15_74843920 rs6938 ENSG00000178718.6 RPP25 -113298 2.68e-10 -0.254462 9e-08 breast cancer 15_74854991 rs1869959 ENSG00000140474.12 ULK3 11794 1.66e-22 -0.333611 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000178802.17 MPI -35014 3.62e-13 0.236507 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000140465.13 CYP1A1 129381 3.6e-05 -0.265762 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000178718.6 RPP25 -102227 6.22e-06 -0.181812 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000140474.12 ULK3 11794 1.66e-22 -0.333611 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000178802.17 MPI -35014 3.62e-13 0.236507 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000140465.13 CYP1A1 129381 3.6e-05 -0.265762 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000178718.6 RPP25 -102227 6.22e-06 -0.181812 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000140474.12 ULK3 11794 1.66e-22 -0.333611 4e-07 breast cancer 15_74854991 rs1869959 ENSG00000178802.17 MPI -35014 3.62e-13 0.236507 4e-07 breast cancer 15_74854991 rs1869959 ENSG00000140465.13 CYP1A1 129381 3.6e-05 -0.265762 4e-07 breast cancer 15_74854991 rs1869959 ENSG00000178718.6 RPP25 -102227 6.22e-06 -0.181812 4e-07 breast cancer 15_75516399 rs8027365 ENSG00000169371.13 SNUPN -110070 4.19e-07 0.166602 1e-07 breast cancer 15_75516399 rs8027365 ENSG00000140398.13 NEIL1 169237 3.17e-06 0.102366 1e-07 breast cancer 15_75516399 rs8027365 ENSG00000140400.16 MAN2C1 148245 4e-91 0.913888 1e-07 breast cancer 15_77977130 rs12906542 ENSG00000167202.11 TBC1D2B -100594 1.75e-05 -0.146831 7e-07 breast cancer 15_79777420 rs166870 ENSG00000136371.10 MTHFS -119959 4.25e-10 -0.264096 3e-07 breast cancer 15_90965985 rs77554484 ENSG00000166965.12 RCCD1 10189 1.37e-24 0.414331 1e-15 breast cancer 15_90965985 rs77554484 ENSG00000184508.10 HDDC3 33416 4.44e-06 -0.200543 1e-15 breast cancer 15_90965985 rs77554484 ENSG00000258725.1 PRC1-AS1 -6875 2.85e-05 -0.357306 1e-15 breast cancer 15_90968837 rs2290203 ENSG00000166965.12 RCCD1 13041 1.01e-09 0.209296 8e-10 breast cancer 15_90968837 rs2290203 ENSG00000258725.1 PRC1-AS1 -4023 2.1e-06 -0.328009 8e-10 breast cancer 15_90968837 rs2290203 ENSG00000166965.12 RCCD1 13041 1.01e-09 0.209296 4e-08 breast cancer 15_90968837 rs2290203 ENSG00000258725.1 PRC1-AS1 -4023 2.1e-06 -0.328009 4e-08 breast cancer 15_90968837 rs2290203 ENSG00000166965.12 RCCD1 13041 1.01e-09 0.209296 2e-19 breast cancer 15_90968837 rs2290203 ENSG00000258725.1 PRC1-AS1 -4023 2.1e-06 -0.328009 2e-19 breast cancer 16_56387075 rs2432539 ENSG00000125124.11 BBS2 -133208 1.75e-23 -0.296001 3e-10 breast cancer 16_56387075 rs2432539 ENSG00000125124.11 BBS2 -133208 1.75e-23 -0.296001 4e-08 breast cancer 16_56497273 rs2303282 ENSG00000125124.11 BBS2 -23010 5.6e-28 -0.322121 3e-07 breast cancer 16_71475893 rs8050871 ENSG00000167377.17 ZNF23 12798 1.89e-13 -0.312108 3e-06 breast cancer 17_2195889 rs16952006 ENSG00000167720.12 SRR -107494 8.34e-13 -0.593097 3e-06 breast cancer 17_30689342 rs8081187 ENSG00000176390.11 CRLF3 -135434 4.91e-05 0.206611 2e-07 breast cancer 17_30887862 rs113934718 ENSG00000176390.11 CRLF3 63086 0.000152882 0.121215 1e-08 breast cancer 17_30894259 rs62070652 ENSG00000176390.11 CRLF3 69483 0.000152882 0.121215 6e-09 breast cancer 17_30894259 rs62070652 ENSG00000176390.11 CRLF3 69483 0.000152882 0.121215 1e-06 breast cancer 17_35565049 rs2840044 ENSG00000205045.8 SLFN12L 27188 3.18e-05 0.129586 8e-06 breast cancer 17_35565049 rs2840044 ENSG00000108733.9 PEX12 -13814 4.6e-05 0.105599 8e-06 breast cancer 17_45394123 rs4763 ENSG00000204650.14 LINC02210 -226205 1.18e-87 1.0218 2e-08 breast cancer 17_45394123 rs4763 ENSG00000264070.1 DND1P1 -191748 3.76e-50 1.23452 2e-08 breast cancer 17_45394123 rs4763 ENSG00000214401.4 KANSL1-AS1 -799453 1.53e-62 1.17986 2e-08 breast cancer 17_45394123 rs4763 ENSG00000263503.1 MAPK8IP1P2 -208217 7.1e-59 1.14701 2e-08 breast cancer 17_45394123 rs4763 ENSG00000186868.15 MAPT -500259 0.000183982 0.146042 2e-08 breast cancer 17_45394123 rs4763 ENSG00000262500.1 MAPK8IP1P1 -849483 7.27e-44 0.953757 2e-08 breast cancer 17_45394123 rs4763 ENSG00000225190.10 PLEKHM1 -96626 2.73e-07 0.212246 2e-08 breast cancer 17_45394123 rs4763 ENSG00000120071.13 KANSL1 -831266 1.49e-06 0.238641 2e-08 breast cancer 17_45394123 rs4763 ENSG00000120088.14 CRHR1 -390157 2.69e-15 0.488151 2e-08 breast cancer 17_45394123 rs4763 ENSG00000214425.7 LRRC37A4P -156212 7.54e-68 -1.13301 2e-08 breast cancer 17_45394123 rs4763 ENSG00000176681.14 LRRC37A -898610 2.13e-16 0.58248 2e-08 breast cancer 17_45394123 rs4763 ENSG00000159314.11 ARHGAP27 -40298 4.89e-05 -0.162152 2e-08 breast cancer 17_45941122 rs62061734 ENSG00000204650.14 LINC02210 320794 1.49e-135 1.03513 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214425.7 LRRC37A4P 390787 4.96e-103 -1.16649 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000262500.1 MAPK8IP1P1 -302484 5e-73 1.04277 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000225190.10 PLEKHM1 450373 1.04e-06 0.182836 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000264070.1 DND1P1 355251 1.94e-70 1.26461 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000176681.14 LRRC37A -351611 4.45e-17 0.538349 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000263503.1 MAPK8IP1P2 338782 1.02e-85 1.17801 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214401.4 KANSL1-AS1 -252454 1.79e-93 1.21639 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000120088.14 CRHR1 156842 1.23e-20 0.513208 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000186868.15 MAPT 46740 2.78e-06 0.164876 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000120071.13 KANSL1 -284267 8.5e-07 0.220951 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000238083.7 LRRC37A2 -570389 1.54e-72 0.933222 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000185829.17 ARL17A -638560 7.88e-15 0.544737 8e-12 breast cancer 17_46751565 rs199533 ENSG00000214401.4 KANSL1-AS1 557989 7.62e-107 1.2481 5e-08 breast cancer 17_46751565 rs199533 ENSG00000176681.14 LRRC37A 458832 2.95e-19 0.565174 5e-08 breast cancer 17_46751565 rs199533 ENSG00000120071.13 KANSL1 526176 3.58e-06 0.206059 5e-08 breast cancer 17_46751565 rs199533 ENSG00000262500.1 MAPK8IP1P1 507959 2.59e-81 1.06767 5e-08 breast cancer 17_46751565 rs199533 ENSG00000186868.15 MAPT 857183 7.81e-06 0.155752 5e-08 breast cancer 17_46751565 rs199533 ENSG00000238083.7 LRRC37A2 240054 2.51e-75 0.934526 5e-08 breast cancer 17_46751565 rs199533 ENSG00000185829.17 ARL17A 171883 2.36e-14 0.529758 5e-08 breast cancer 17_46751565 rs199533 ENSG00000108379.9 WNT3 -81493 0.000135435 0.22541 5e-08 breast cancer 17_46751565 rs199533 ENSG00000120088.14 CRHR1 967285 9.89e-21 0.508716 5e-08 breast cancer 17_46788237 rs199498 ENSG00000185829.17 ARL17A 208555 9.99e-12 0.456087 2e-08 breast cancer 17_46788237 rs199498 ENSG00000214401.4 KANSL1-AS1 594661 2.85e-56 0.974128 2e-08 breast cancer 17_46788237 rs199498 ENSG00000238083.7 LRRC37A2 276726 8.17e-45 0.74034 2e-08 breast cancer 17_46788237 rs199498 ENSG00000262500.1 MAPK8IP1P1 544631 3.05e-47 0.842953 2e-08 breast cancer 17_46788237 rs199498 ENSG00000108379.9 WNT3 -44821 3.98e-05 0.232132 2e-08 breast cancer 17_46788237 rs199498 ENSG00000176681.14 LRRC37A 495504 1.12e-17 0.518956 2e-08 breast cancer 17_50196930 rs2075555 ENSG00000108823.15 SGCA 30945 2.08e-05 -0.284707 8e-08 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 5.98e-29 -0.396733 8e-09 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 5.98e-29 -0.396733 5e-12 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 5.98e-29 -0.396733 2e-13 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 5.98e-29 -0.396733 1e-08 breast cancer 17_55132413 rs2787486 ENSG00000166263.13 STXBP4 163627 9.08e-23 -0.345885 2e-34 breast cancer 17_55132413 rs2787486 ENSG00000166263.13 STXBP4 163627 9.08e-23 -0.345885 6e-29 breast cancer 17_55135212 rs2628317 ENSG00000166263.13 STXBP4 166426 1.43e-20 -0.351455 4e-16 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 1.02e-36 -0.499766 1e-09 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 1.02e-36 -0.499766 4e-10 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 1.02e-36 -0.499766 6e-06 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 1.02e-36 -0.499766 5e-07 breast cancer 17_81211408 rs9913021 ENSG00000141577.13 CEP131 -11591 6.87e-09 -0.13091 2e-06 breast cancer 17_82597601 rs62079673 ENSG00000141580.15 WDR45B -50952 7.13e-16 0.250757 1e-06 breast cancer 17_82946434 rs898097 ENSG00000141560.14 FN3KRP 229751 1.04e-20 -0.471418 2e-06 breast cancer 19_17099805 rs7249698 ENSG00000131351.14 HAUS8 24180 3.66e-06 -0.182544 4e-07 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 1.03e-13 0.435591 4e-13 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 1.27e-09 -0.183333 4e-13 breast cancer 19_17278895 rs8170 ENSG00000130300.8 PLVAP -98455 1.63e-07 -0.250071 4e-13 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 1.71e-06 0.155684 4e-13 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 1.03e-13 0.435591 2e-09 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 1.27e-09 -0.183333 2e-09 breast cancer 19_17278895 rs8170 ENSG00000130300.8 PLVAP -98455 1.63e-07 -0.250071 2e-09 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 1.71e-06 0.155684 2e-09 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 1.03e-13 0.435591 1e-12 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 1.27e-09 -0.183333 1e-12 breast cancer 19_17278895 rs8170 ENSG00000130300.8 PLVAP -98455 1.63e-07 -0.250071 1e-12 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 1.71e-06 0.155684 1e-12 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 1.03e-13 0.435591 9e-13 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 1.27e-09 -0.183333 9e-13 breast cancer 19_17278895 rs8170 ENSG00000130300.8 PLVAP -98455 1.63e-07 -0.250071 9e-13 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 1.71e-06 0.155684 9e-13 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 1.03e-13 0.435591 7e-21 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 1.27e-09 -0.183333 7e-21 breast cancer 19_17278895 rs8170 ENSG00000130300.8 PLVAP -98455 1.63e-07 -0.250071 7e-21 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 1.71e-06 0.155684 7e-21 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 1.03e-13 0.435591 2e-06 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 1.27e-09 -0.183333 2e-06 breast cancer 19_17278895 rs8170 ENSG00000130300.8 PLVAP -98455 1.63e-07 -0.250071 2e-06 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 1.71e-06 0.155684 2e-06 breast cancer 19_17279482 rs4808075 ENSG00000160117.14 ANKLE1 -2163 2.84e-05 0.222793 4e-07 breast cancer 19_17279482 rs4808075 ENSG00000160117.14 ANKLE1 -2163 2.84e-05 0.222793 2e-09 breast cancer 19_17283116 rs56069439 ENSG00000160117.14 ANKLE1 1471 3.39e-05 0.221107 1e-32 breast cancer 19_17283116 rs56069439 ENSG00000160117.14 ANKLE1 1471 3.39e-05 0.221107 8e-19 breast cancer 19_17283116 rs56069439 ENSG00000160117.14 ANKLE1 1471 3.39e-05 0.221107 9e-09 breast cancer 19_17290595 rs67397200 ENSG00000160117.14 ANKLE1 8950 6.9e-05 0.210917 3e-37 breast cancer 19_17290595 rs67397200 ENSG00000160117.14 ANKLE1 8950 6.9e-05 0.210917 3e-17 breast cancer 19_17290595 rs67397200 ENSG00000160117.14 ANKLE1 8950 6.9e-05 0.210917 2e-08 breast cancer 19_18422832 rs7258465 ENSG00000105656.12 ELL -99295 9.85e-06 0.0888853 3e-28 breast cancer 19_18422832 rs7258465 ENSG00000175489.9 LRRC25 25215 1.09e-05 -0.0982727 3e-28 breast cancer 19_18422832 rs7258465 ENSG00000130511.15 SSBP4 3968 1.57e-05 -0.104433 3e-28 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 4.52e-05 -0.0925863 6e-14 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 2.92e-06 0.0952317 6e-14 breast cancer 19_18460331 rs4808801 ENSG00000130511.15 SSBP4 41467 1.89e-05 -0.104924 6e-14 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 4.52e-05 -0.0925863 5e-15 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 2.92e-06 0.0952317 5e-15 breast cancer 19_18460331 rs4808801 ENSG00000130511.15 SSBP4 41467 1.89e-05 -0.104924 5e-15 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 4.52e-05 -0.0925863 4e-15 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 2.92e-06 0.0952317 4e-15 breast cancer 19_18460331 rs4808801 ENSG00000130511.15 SSBP4 41467 1.89e-05 -0.104924 4e-15 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 4.52e-05 -0.0925863 2e-31 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 2.92e-06 0.0952317 2e-31 breast cancer 19_18460331 rs4808801 ENSG00000130511.15 SSBP4 41467 1.89e-05 -0.104924 2e-31 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 4.52e-05 -0.0925863 5e-28 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 2.92e-06 0.0952317 5e-28 breast cancer 19_18460331 rs4808801 ENSG00000130511.15 SSBP4 41467 1.89e-05 -0.104924 5e-28 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 4.52e-05 -0.0925863 6e-06 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 2.92e-06 0.0952317 6e-06 breast cancer 19_18460331 rs4808801 ENSG00000130511.15 SSBP4 41467 1.89e-05 -0.104924 6e-06 breast cancer 19_18522945 rs172032 ENSG00000105656.12 ELL 818 1.09e-07 0.102389 1e-16 breast cancer 19_19417997 rs1469713 ENSG00000187664.8 HAPLN4 155201 2.52e-10 0.387844 1e-10 breast cancer 19_19417997 rs1469713 ENSG00000213996.12 TM6SF2 144606 5.41e-08 0.255586 1e-10 breast cancer 19_19417997 rs1469713 ENSG00000250067.11 YJEFN3 -111367 0.000136953 -0.110207 1e-10 breast cancer 19_19434887 rs2965183 ENSG00000213996.12 TM6SF2 161496 1.16e-08 0.268525 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000187664.8 HAPLN4 172091 1.17e-10 0.395866 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000213996.12 TM6SF2 161496 1.16e-08 0.268525 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000187664.8 HAPLN4 172091 1.17e-10 0.395866 1e-11 breast cancer 19_19535463 rs2304098 ENSG00000213996.12 TM6SF2 262072 5.37e-08 0.254717 2e-11 breast cancer 19_19535463 rs2304098 ENSG00000250067.11 YJEFN3 6099 0.000105108 -0.111645 2e-11 breast cancer 19_19535463 rs2304098 ENSG00000187664.8 HAPLN4 272667 1.25e-10 0.392661 2e-11 breast cancer 19_43779080 rs1685191 ENSG00000176222.8 ZNF404 -104971 9.77e-08 -0.169707 4e-20 breast cancer 19_43779080 rs1685191 ENSG00000204920.10 ZNF155 -188782 2.67e-05 -0.230438 4e-20 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 7.61e-06 0.193717 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 5.44e-12 -0.214858 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 7.64e-07 -0.267643 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 7.61e-06 0.193717 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 5.44e-12 -0.214858 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 7.64e-07 -0.267643 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 7.61e-06 0.193717 8e-09 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 5.44e-12 -0.214858 8e-09 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 7.64e-07 -0.267643 8e-09 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 7.61e-06 0.193717 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 5.44e-12 -0.214858 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 7.64e-07 -0.267643 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 7.61e-06 0.193717 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 5.44e-12 -0.214858 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 7.64e-07 -0.267643 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 7.61e-06 0.193717 1e-16 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 5.44e-12 -0.214858 1e-16 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 7.64e-07 -0.267643 1e-16 breast cancer 19_43919418 rs375066 ENSG00000204920.10 ZNF155 -48444 3.15e-06 -0.254123 2e-14 breast cancer 19_43919418 rs375066 ENSG00000176222.8 ZNF404 35367 9.28e-27 -0.322228 2e-14 breast cancer 19_51869723 rs10411161 ENSG00000161551.14 ZNF577 -18253 1.72e-07 -0.183256 7e-06 breast cancer 2_171513371 rs11680449 ENSG00000071967.11 CYBRD1 -8876 3.32e-08 0.166505 4e-09 breast cancer 2_171568284 rs11675683 ENSG00000071967.11 CYBRD1 46037 8.19e-17 0.224749 4e-08 breast cancer 2_201003582 rs112257290 ENSG00000155749.12 FLACC1 -353816 7.74e-05 0.44825 2e-07 breast cancer 2_201258707 rs3769821 ENSG00000155749.12 FLACC1 -98691 3.03e-11 -0.307224 4e-18 breast cancer 2_201258707 rs3769821 ENSG00000064012.21 CASP8 25264 1.05e-40 0.428255 4e-18 breast cancer 2_201279205 rs10931936 ENSG00000064012.21 CASP8 45762 2.68e-45 0.475755 6e-06 breast cancer 2_201279205 rs10931936 ENSG00000155749.12 FLACC1 -78193 7.09e-10 -0.304247 6e-06 breast cancer 2_201279205 rs10931936 ENSG00000240344.8 PPIL3 389902 7.94e-06 -0.228981 6e-06 breast cancer 2_201288355 rs1035142 ENSG00000064012.21 CASP8 54912 6.73e-61 0.502829 3e-09 breast cancer 2_201288355 rs1035142 ENSG00000155749.12 FLACC1 -69043 1.07e-13 -0.342707 3e-09 breast cancer 2_201288502 rs700635 ENSG00000240344.8 PPIL3 399199 5.12e-06 -0.233866 5e-16 breast cancer 2_201288502 rs700635 ENSG00000155749.12 FLACC1 -68896 7.88e-10 -0.30376 5e-16 breast cancer 2_201288502 rs700635 ENSG00000064012.21 CASP8 55059 1.29e-45 0.477568 5e-16 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 1.29e-45 0.477568 6e-24 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 7.88e-10 -0.30376 6e-24 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 5.12e-06 -0.233866 6e-24 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 1.29e-45 0.477568 2e-16 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 7.88e-10 -0.30376 2e-16 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 5.12e-06 -0.233866 2e-16 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 1.29e-45 0.477568 7e-07 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 7.88e-10 -0.30376 7e-07 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 5.12e-06 -0.233866 7e-07 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 1.29e-45 0.477568 9e-14 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 7.88e-10 -0.30376 9e-14 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 5.12e-06 -0.233866 9e-14 breast cancer 2_201384985 rs2714486 ENSG00000155749.12 FLACC1 27587 1.46e-09 0.364717 7e-10 breast cancer 2_201384985 rs2714486 ENSG00000064012.21 CASP8 151542 1.27e-26 -0.461644 7e-10 breast cancer 2_201502866 rs77688320 ENSG00000155749.12 FLACC1 145468 1.09e-08 0.373578 3e-09 breast cancer 2_201502866 rs77688320 ENSG00000064012.21 CASP8 269423 6.82e-24 -0.474654 3e-09 breast cancer 2_24906604 rs6725517 ENSG00000115137.11 DNAJC27 -65490 0.000136627 0.107983 3e-12 breast cancer 2_24906604 rs6725517 ENSG00000138031.14 ADCY3 -13235 9.74e-14 0.20778 3e-12 breast cancer 2_24906604 rs6725517 ENSG00000138092.10 CENPO 113221 6.8e-10 0.232271 3e-12 breast cancer 2_24906604 rs6725517 ENSG00000115137.11 DNAJC27 -65490 0.000136627 0.107983 5e-11 breast cancer 2_24906604 rs6725517 ENSG00000138031.14 ADCY3 -13235 9.74e-14 0.20778 5e-11 breast cancer 2_24906604 rs6725517 ENSG00000138092.10 CENPO 113221 6.8e-10 0.232271 5e-11 breast cancer 2_25068670 rs1971136 ENSG00000138092.10 CENPO 275287 2.19e-07 -0.18855 5e-09 breast cancer 2_25068670 rs1971136 ENSG00000138031.14 ADCY3 148831 7.25e-07 -0.135284 5e-09 breast cancer 2_25068670 rs1971136 ENSG00000115137.11 DNAJC27 96576 2.97e-05 -0.11326 5e-09 breast cancer 2_28896719 rs67073037 ENSG00000171103.10 TRMT61B 26418 3.56e-12 0.320341 3e-06 breast cancer 2_28896719 rs67073037 ENSG00000171103.10 TRMT61B 26418 3.56e-12 0.320341 5e-09 breast cancer 2_28897867 rs4577244 ENSG00000171103.10 TRMT61B 27566 4.16e-12 0.317922 2e-09 breast cancer 2_41931164 rs17029056 ENSG00000162878.12 PKDCC -116856 1.21e-06 0.204058 4e-06 breast cancer 2_41931164 rs17029056 ENSG00000234362.5 LINC01914 -2559 7.75e-05 0.18587 4e-06 breast cancer 20_34000289 rs2284378 ENSG00000101460.12 MAP1LC3A -546565 7e-07 0.148016 1e-08 breast cancer 20_34002002 rs2300206 ENSG00000101460.12 MAP1LC3A -544852 7e-07 0.148016 2e-08 breast cancer 20_34002002 rs2300206 ENSG00000101460.12 MAP1LC3A -544852 7e-07 0.148016 6e-06 breast cancer 20_34131991 rs11907546 ENSG00000101460.12 MAP1LC3A -414863 8.33e-07 0.13828 3e-06 breast cancer 20_34131991 rs11907546 ENSG00000101460.12 MAP1LC3A -414863 8.33e-07 0.13828 3e-09 breast cancer 20_39051206 rs742276 ENSG00000101445.9 PPP1R16B 245501 9.12e-05 0.128308 9e-06 breast cancer 21_46360308 rs9808759 ENSG00000182362.13 YBEY 73971 5.99e-18 -1.02528 4e-07 breast cancer 21_46360308 rs9808759 ENSG00000160284.14 SPATC1L 175832 5.56e-05 -0.42899 4e-07 breast cancer 21_46360308 rs9808759 ENSG00000160307.9 S100B -244900 0.000200565 0.256725 4e-07 breast cancer 21_46360308 rs9808759 ENSG00000182362.13 YBEY 73971 5.99e-18 -1.02528 6e-09 breast cancer 21_46360308 rs9808759 ENSG00000160284.14 SPATC1L 175832 5.56e-05 -0.42899 6e-09 breast cancer 21_46360308 rs9808759 ENSG00000160307.9 S100B -244900 0.000200565 0.256725 6e-09 breast cancer 22_29273659 rs4820803 ENSG00000100263.13 RHBDD3 5681 1.67e-06 0.154111 2e-06 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 6.48e-21 -0.737003 9e-14 breast cancer 22_38962032 rs12628403 ENSG00000128383.12 APOBEC3A 9291 3.53e-11 -0.360464 9e-14 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 6.48e-21 -0.737003 4e-06 breast cancer 22_38962032 rs12628403 ENSG00000128383.12 APOBEC3A 9291 3.53e-11 -0.360464 4e-06 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 6.48e-21 -0.737003 3e-17 breast cancer 22_38962032 rs12628403 ENSG00000128383.12 APOBEC3A 9291 3.53e-11 -0.360464 3e-17 breast cancer 22_42745087 rs4820477 ENSG00000128274.15 A4GALT 23789 4.97e-08 -0.170651 9e-07 breast cancer 3_100149260 rs9289981 ENSG00000184220.11 CMSS1 331426 1.82e-06 0.124364 4e-10 breast cancer 3_14520620 rs1106333 ENSG00000144596.12 GRIP2 -35455 3.7e-07 0.307438 6e-08 breast cancer 3_156645453 rs2136690 ENSG00000240875.5 LINC00886 -171609 5.62e-07 -0.238762 4e-06 breast cancer 3_156927968 rs7637701 ENSG00000240875.5 LINC00886 110906 1.33e-21 -0.426115 1e-06 breast cancer 3_46825376 rs6796502 ENSG00000188086.13 PRSS45P 80621 2.7e-06 0.365047 2e-08 breast cancer 3_46825376 rs6796502 ENSG00000188086.13 PRSS45P 80621 2.7e-06 0.365047 8e-07 breast cancer 3_46825376 rs6796502 ENSG00000188086.13 PRSS45P 80621 2.7e-06 0.365047 7e-16 breast cancer 3_46825376 rs6796502 ENSG00000188086.13 PRSS45P 80621 2.7e-06 0.365047 6e-15 breast cancer 3_46846708 rs56387622 ENSG00000188086.13 PRSS45P 101953 2.99e-06 0.357432 5e-19 breast cancer 3_49129027 rs61729152 ENSG00000164048.13 ZNF589 887927 0.000333163 0.506772 6e-06 breast cancer 3_64074452 rs1450985 ENSG00000239653.1 PSMD6-AS2 70430 1.28e-07 0.159592 6e-08 breast cancer 4_121185138 rs17051310; rs13116936 ENSG00000173376.13 NDNF 112117 0.000102909 -0.437065 2e-06 breast cancer 4_38814717 rs6815814 ENSG00000197712.11 FAM114A1 -52960 3.79e-07 0.191749 6e-13 breast cancer 4_38814717 rs6815814 ENSG00000197712.11 FAM114A1 -52960 3.79e-07 0.191749 1e-11 breast cancer 4_57013626 rs4865169 ENSG00000084092.6 NOA1 34987 6.27e-05 0.119629 7e-06 breast cancer 5_10467590 rs1092913 ENSG00000145495.15 MARCHF6 113887 2.25e-06 -0.167309 2e-06 breast cancer 5_128098106 rs1112956 ENSG00000245937.7 SLC12A2-DT 14934 7.14e-36 0.556357 9e-06 breast cancer 5_128227188 rs36715 ENSG00000245937.7 SLC12A2-DT 144016 4.69e-21 0.404979 4e-06 breast cancer 5_132304843 rs6860806 ENSG00000197375.12 SLC22A5 -64909 1.93e-05 -0.172182 8e-08 breast cancer 5_132304843 rs6860806 ENSG00000131435.12 PDLIM4 47172 1.78e-05 -0.101344 8e-08 breast cancer 5_132304843 rs6860806 ENSG00000197375.12 SLC22A5 -64909 1.93e-05 -0.172182 3e-08 breast cancer 5_132304843 rs6860806 ENSG00000131435.12 PDLIM4 47172 1.78e-05 -0.101344 3e-08 breast cancer 5_132466255 rs2522057 ENSG00000233006.6 MIR3936HG 96607 5.51e-08 -0.18144 9e-08 breast cancer 5_132466255 rs2522057 ENSG00000233006.6 MIR3936HG 96607 5.51e-08 -0.18144 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000233006.6 MIR3936HG 96607 5.51e-08 -0.18144 1e-08 breast cancer 5_132497907 rs736801 ENSG00000233006.6 MIR3936HG 128259 2.13e-06 0.162001 8e-08 breast cancer 5_1453229 rs2617583 ENSG00000142319.17 SLC6A3 7799 3.08e-09 -0.211657 9e-07 breast cancer 5_149053986 rs250677 ENSG00000169247.11 SH3TC2 -9177 9.57e-11 0.237705 8e-06 breast cancer 5_154976135 rs6890610 ENSG00000082516.8 GEMIN5 37926 8.25e-06 -0.151762 6e-06 breast cancer 5_154976135 rs6890610 ENSG00000155508.13 CNOT8 118582 1.58e-05 -0.172346 6e-06 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 7.53e-10 0.245967 3e-36 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 7.53e-10 0.245967 5e-09 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 7.53e-10 0.245967 1e-08 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 7.53e-10 0.245967 7e-20 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 7.53e-10 0.245967 3e-27 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 7.53e-10 0.245967 1e-39 breast cancer 5_56737113 rs1862626 ENSG00000155542.11 SETD9 -172147 1.34e-09 0.242824 4e-12 breast cancer 5_56977866 rs10036895 ENSG00000155542.11 SETD9 68606 1.65e-23 0.358275 2e-12 breast cancer 5_81972251 rs111549985 ENSG00000186468.12 RPS23 -306326 2.15e-46 -0.421069 6e-12 breast cancer 5_81972251 rs111549985 ENSG00000205464.11 ATP6AP1L -307211 6.88e-41 0.704325 6e-12 breast cancer 5_81972251 rs111549985 ENSG00000152348.15 ATG10 226 9.92e-46 0.859414 6e-12 breast cancer 5_82161539 rs2407064 ENSG00000205464.11 ATP6AP1L -117923 5.72e-41 -0.701544 3e-08 breast cancer 5_82161539 rs2407064 ENSG00000152348.15 ATG10 189514 2.32e-38 -0.795808 3e-08 breast cancer 5_82161539 rs2407064 ENSG00000186468.12 RPS23 -117038 4.63e-48 0.424962 3e-08 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 1.44e-44 -0.738194 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 6.78e-38 -0.804936 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 6.14e-50 0.438572 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 1.44e-44 -0.738194 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 6.78e-38 -0.804936 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 6.14e-50 0.438572 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 1.44e-44 -0.738194 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 6.78e-38 -0.804936 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 6.14e-50 0.438572 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 1.44e-44 -0.738194 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 6.78e-38 -0.804936 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 6.14e-50 0.438572 1e-12 breast cancer 5_82340549 rs2407156 ENSG00000186468.12 RPS23 61972 5.31e-32 -0.359009 2e-06 breast cancer 5_82340549 rs2407156 ENSG00000205464.11 ATP6AP1L 61087 7.96e-30 0.612587 2e-06 breast cancer 5_82340549 rs2407156 ENSG00000152348.15 ATG10 368524 8.49e-24 0.643756 2e-06 breast cancer 6_122394099 rs74392007 ENSG00000025156.12 HSF2 -5447 1.42e-12 -0.391477 3e-07 breast cancer 6_122554525 rs76092474 ENSG00000025156.12 HSF2 154979 3.5e-11 -0.366208 3e-06 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 2.15e-22 -0.386273 4e-08 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 2.15e-22 -0.386273 8e-10 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 2.15e-22 -0.386273 2e-12 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 2.15e-22 -0.386273 3e-12 breast cancer 6_25710343 rs68006638 ENSG00000186470.13 BTN3A2 -654816 1.64e-30 -1.0224 2e-07 breast cancer 6_25874195 rs13198474 ENSG00000186470.13 BTN3A2 -490964 2.79e-31 -1.03311 2e-07 breast cancer 6_26175638 rs17598658 ENSG00000186470.13 BTN3A2 -189521 4.05e-35 -1.03333 2e-09 breast cancer 6_26463346 rs13195401 ENSG00000186470.13 BTN3A2 98187 4.26e-42 -1.07809 2e-09 breast cancer 6_26993501 rs34546498 ENSG00000224843.6 LINC00240 36509 0.000220667 0.446825 9e-10 breast cancer 6_26993501 rs34546498 ENSG00000186470.13 BTN3A2 628342 6.36e-41 -1.08412 9e-10 breast cancer 6_27307055 rs56114371 ENSG00000186470.13 BTN3A2 941896 1e-38 -1.03655 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000216901.1 ZNF603P -869133 9.11e-06 0.513505 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000224843.6 LINC00240 350063 0.00033378 0.424756 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000219392.1 ZNF602P -808573 4.47e-06 -0.591117 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000197062.11 ZSCAN26 -959955 2.85e-05 -0.193819 2e-09 breast cancer 6_27457865 rs34196306 ENSG00000219392.1 ZNF602P -657763 6.55e-06 -0.597948 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000197062.11 ZSCAN26 -809145 1.05e-05 -0.20979 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000216901.1 ZNF603P -718323 4.11e-06 0.548008 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000224843.6 LINC00240 500873 0.000128592 0.466054 1e-09 breast cancer 6_27873148 rs45509595 ENSG00000216901.1 ZNF603P -303040 8.23e-06 0.523225 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000219392.1 ZNF602P -242480 5.65e-05 -0.527637 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000197062.11 ZSCAN26 -393862 8.77e-06 -0.208474 5e-09 breast cancer 6_28106103 rs34662244 ENSG00000197062.11 ZSCAN26 -160907 8.77e-06 -0.208474 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000216901.1 ZNF603P -70085 8.23e-06 0.523225 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000219392.1 ZNF602P -9525 5.65e-05 -0.527637 3e-09 breast cancer 6_28364364 rs13214023 ENSG00000197062.11 ZSCAN26 97354 3.35e-06 -0.219821 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000219392.1 ZNF602P 248736 3.92e-05 -0.543796 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000216901.1 ZNF603P 188176 4.16e-06 0.544919 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000219891.2 ZSCAN12P1 273210 0.000169999 -0.461305 1e-09 breast cancer 6_28958443 rs9257408 ENSG00000197279.3 ZNF165 877312 8.87e-05 -0.227309 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000235109.7 ZSCAN31 602172 1.44e-08 0.201338 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000187987.9 ZSCAN23 514941 0.000148765 0.150335 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000204713.10 TRIM27 34454 2.38e-08 0.153628 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 2.94e-09 0.328157 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000230795.3 HLA-K -968735 0.000109461 0.234333 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000197279.3 ZNF165 877312 8.87e-05 -0.227309 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000235109.7 ZSCAN31 602172 1.44e-08 0.201338 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000187987.9 ZSCAN23 514941 0.000148765 0.150335 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000204713.10 TRIM27 34454 2.38e-08 0.153628 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 2.94e-09 0.328157 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000230795.3 HLA-K -968735 0.000109461 0.234333 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000197279.3 ZNF165 877312 8.87e-05 -0.227309 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000235109.7 ZSCAN31 602172 1.44e-08 0.201338 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000187987.9 ZSCAN23 514941 0.000148765 0.150335 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000204713.10 TRIM27 34454 2.38e-08 0.153628 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 2.94e-09 0.328157 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000230795.3 HLA-K -968735 0.000109461 0.234333 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000197279.3 ZNF165 877312 8.87e-05 -0.227309 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000235109.7 ZSCAN31 602172 1.44e-08 0.201338 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000187987.9 ZSCAN23 514941 0.000148765 0.150335 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000204713.10 TRIM27 34454 2.38e-08 0.153628 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 2.94e-09 0.328157 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000230795.3 HLA-K -968735 0.000109461 0.234333 7e-08 breast cancer 6_29280372 rs3130834 ENSG00000228078.1 HLA-U -653729 0.00012813 0.549526 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000204644.9 ZFP57 -400738 5.31e-17 1.10848 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000281831.1 HCP5B -593411 1.14e-09 0.788694 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000229274.1 LINC02829 -217137 2.35e-05 0.463366 5e-09 breast cancer 6_29388554 rs9257809 ENSG00000204632.11 HLA-G -438413 0.000109873 -0.503533 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000228078.1 HLA-U -545547 8.59e-05 0.545752 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000230795.3 HLA-K -538624 0.000103946 -0.485769 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000281831.1 HCP5B -485229 2.02e-10 0.796672 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000204644.9 ZFP57 -292556 1.04e-19 1.15585 3e-08 breast cancer 6_29509637 rs1233480 ENSG00000281831.1 HCP5B -364146 2.29e-06 0.498705 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000204644.9 ZFP57 -171473 4.98e-11 0.7134 5e-08 breast cancer 6_29693039 rs3116813 ENSG00000228078.1 HLA-U -241062 1.63e-05 0.578931 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000230795.3 HLA-K -234139 2.5e-07 -0.620674 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000239257.1 RPL23AP1 -33843 1.79e-05 0.406735 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204644.9 ZFP57 11929 8.96e-27 1.2944 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000281831.1 HCP5B -180744 1.07e-12 0.858361 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204622.11 HLA-J -312932 0.000123004 -0.417413 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204632.11 HLA-G -133928 4.08e-06 -0.578612 6e-07 breast cancer 6_29785031 rs147680653 ENSG00000281831.1 HCP5B -88752 2.16e-13 0.879848 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204632.11 HLA-G -41936 4.88e-06 -0.572056 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000239257.1 RPL23AP1 58149 1.5e-05 0.40902 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000137312.14 FLOT1 -957702 5.16e-15 0.369675 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000230795.3 HLA-K -142147 1.52e-07 -0.62931 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000228078.1 HLA-U -149070 7.32e-06 0.599623 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204622.11 HLA-J -220940 0.000155939 -0.409748 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204644.9 ZFP57 103921 5.88e-27 1.29402 1e-06 breast cancer 6_29882943 rs1611579 ENSG00000137312.14 FLOT1 -859790 5.87e-14 0.3454 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000281831.1 HCP5B 9160 3.78e-15 0.910156 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000230795.3 HLA-K -44235 1.4e-08 -0.657844 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000228078.1 HLA-U -51158 4.25e-06 0.596283 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000239257.1 RPL23AP1 156061 4.07e-06 0.421781 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204622.11 HLA-J -123028 6.64e-05 -0.418982 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000214894.6 LINC00243 -947716 5.62e-05 0.430567 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000231130.1 HLA-T -13711 0.000127811 -0.508571 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204632.11 HLA-G 55976 1.37e-06 -0.585738 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204644.9 ZFP57 201833 9.98e-27 1.25066 8e-07 breast cancer 6_30003183 rs3094146 ENSG00000230795.3 HLA-K 76005 1.63e-08 -0.652038 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000204622.11 HLA-J -2788 8.24e-05 -0.4118 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000204632.11 HLA-G 176216 1.03e-06 -0.589676 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000228078.1 HLA-U 69082 8.2e-06 0.576135 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000281831.1 HCP5B 129400 3.79e-15 0.906043 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000137312.14 FLOT1 -739550 3.46e-14 0.346783 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000231130.1 HLA-T 106529 0.000254546 -0.483811 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000204644.9 ZFP57 322073 1.17e-26 1.24357 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000214894.6 LINC00243 -827476 3.02e-05 0.443604 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000239257.1 RPL23AP1 276301 7.51e-06 0.40841 7e-07 breast cancer 6_30107326 rs2523992 ENSG00000204644.9 ZFP57 426216 2.36e-10 0.595735 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000214894.6 LINC00243 -723333 7.24e-05 0.326263 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000239257.1 RPL23AP1 380444 1.67e-05 0.303563 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000137312.14 FLOT1 -635407 1.93e-10 0.227382 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000230795.3 HLA-K 180148 2.51e-06 -0.422442 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000228078.1 HLA-U 173225 4.99e-06 0.455289 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000281831.1 HCP5B 233543 3.37e-10 0.566888 2e-07 breast cancer 6_30365728 rs3094054 ENSG00000204644.9 ZFP57 684618 1.99e-20 1.09114 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204632.11 HLA-G 538761 3.64e-06 -0.557082 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000066379.14 POLR1H 304087 0.000237172 -0.221458 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000230795.3 HLA-K 438550 6.92e-06 -0.520394 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000281831.1 HCP5B 491945 1.39e-10 0.745406 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000239257.1 RPL23AP1 638846 1.62e-05 0.391625 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000146112.11 PPP1R18 -322167 1.97e-05 -0.186144 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000277402.1 MIR6891 -989588 3.68e-06 -0.504027 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204531.17 POU5F1 -815003 5.45e-05 0.446047 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000228078.1 HLA-U 431627 0.000135493 0.492257 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204536.13 CCHCR1 -792510 7.01e-08 0.319546 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204540.10 PSORS1C1 -749022 3.04e-06 -0.430369 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000137312.14 FLOT1 -377005 6.75e-18 0.388424 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000214894.6 LINC00243 -464931 1.02e-05 0.466432 1e-07 breast cancer 6_30374976 rs115707823 ENSG00000228078.1 HLA-U 440875 8.97e-06 0.505837 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000281831.1 HCP5B 501193 5.93e-08 0.561954 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000137312.14 FLOT1 -367757 5.85e-11 0.266494 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000204644.9 ZFP57 693866 5.35e-16 0.856096 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000204536.13 CCHCR1 -783262 1.26e-05 0.230754 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000228078.1 HLA-U 440875 8.97e-06 0.505837 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000281831.1 HCP5B 501193 5.93e-08 0.561954 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000137312.14 FLOT1 -367757 5.85e-11 0.266494 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000204644.9 ZFP57 693866 5.35e-16 0.856096 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000204536.13 CCHCR1 -783262 1.26e-05 0.230754 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000146112.11 PPP1R18 -214369 3.95e-07 -0.207652 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204540.10 PSORS1C1 -641224 7.59e-08 -0.465474 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204531.17 POU5F1 -707205 7.05e-05 0.41452 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204632.11 HLA-G 646559 9.99e-06 -0.501815 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000137312.14 FLOT1 -269207 4.96e-19 0.377673 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000277402.1 MIR6891 -881790 7.41e-08 -0.5501 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204536.13 CCHCR1 -684712 8.38e-09 0.321245 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000230795.3 HLA-K 546348 4.07e-05 -0.448935 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000214894.6 LINC00243 -357133 4.69e-06 0.455892 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204538.3 PSORS1C2 -665824 8.17e-05 -0.416458 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204644.9 ZFP57 792416 4.81e-17 0.941063 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000281831.1 HCP5B 599743 4.89e-09 0.643763 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000239257.1 RPL23AP1 746644 7.3e-05 0.340421 2e-06 breast cancer 6_30576624 rs3132610 ENSG00000204536.13 CCHCR1 -581614 7.38e-10 0.349067 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204632.11 HLA-G 749657 9.94e-06 -0.511716 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000230795.3 HLA-K 649446 2.17e-06 -0.526509 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000137312.14 FLOT1 -166109 3.64e-20 0.396112 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000228078.1 HLA-U 642523 0.000145407 0.471217 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204644.9 ZFP57 895514 7.69e-18 0.981582 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000277402.1 MIR6891 -778692 7.33e-07 -0.517597 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000214894.6 LINC00243 -254035 5.67e-06 0.460858 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204525.16 HLA-C -695481 0.000145536 0.305506 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000146112.11 PPP1R18 -111271 6.55e-06 -0.188803 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000239257.1 RPL23AP1 849742 6.29e-06 0.39403 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204531.17 POU5F1 -604107 1.29e-05 0.462853 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204540.10 PSORS1C1 -538126 1.06e-07 -0.469368 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000281831.1 HCP5B 702841 3.31e-10 0.702568 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204516.9 MICB -918257 6.76e-08 0.395145 1e-06 breast cancer 6_30682249 rs9262142 ENSG00000228078.1 HLA-U 748148 0.00019072 0.459339 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000137312.14 FLOT1 -60484 1.55e-19 0.386967 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000146112.11 PPP1R18 -5646 2.75e-06 -0.194643 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000281831.1 HCP5B 808466 4.49e-10 0.692048 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000240053.8 LY6G5B -987918 3.93e-05 0.175343 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204632.11 HLA-G 855282 4.83e-06 -0.524885 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204538.3 PSORS1C2 -457101 0.000227905 -0.39464 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204536.13 CCHCR1 -475989 8.4e-10 0.34523 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204516.9 MICB -812632 8.81e-08 0.388723 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204531.17 POU5F1 -498482 8.42e-06 0.46871 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000214894.6 LINC00243 -148410 1.79e-06 0.480527 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204525.16 HLA-C -589856 6.99e-05 0.317045 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000277402.1 MIR6891 -673067 1e-06 -0.507392 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000230795.3 HLA-K 755071 1.79e-06 -0.526483 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204540.10 PSORS1C1 -432501 7.72e-08 -0.470581 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000239257.1 RPL23AP1 955367 7.01e-06 0.389032 3e-06 breast cancer 6_30793795 rs3129984 ENSG00000204531.17 POU5F1 -386936 2.47e-06 0.483241 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000277402.1 MIR6891 -561521 1.75e-07 -0.527945 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000225851.1 HLA-S -588493 0.000157739 -0.424752 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204538.3 PSORS1C2 -345555 1.88e-05 -0.445992 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000281831.1 HCP5B 920012 8.29e-10 0.665688 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000214894.6 LINC00243 -36864 4.06e-06 0.453135 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204525.16 HLA-C -478310 7.7e-06 0.347311 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000137312.14 FLOT1 51062 2.2e-19 0.376362 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204516.9 MICB -701086 1.23e-07 0.375379 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204540.10 PSORS1C1 -320955 1.05e-08 -0.488084 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204536.13 CCHCR1 -364443 2.03e-11 0.366546 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000240053.8 LY6G5B -876372 4.74e-05 0.169421 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000230795.3 HLA-K 866617 3.07e-06 -0.502559 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000146112.11 PPP1R18 105900 2.31e-06 -0.191428 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204632.11 HLA-G 966828 9.5e-07 -0.548362 8e-06 breast cancer 6_31347004 rs115392158 ENSG00000204338.8 CYP21A1P -658685 2.56e-06 -0.263593 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000204536.13 CCHCR1 188766 9.94e-09 0.211465 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000204301.6 NOTCH4 -877063 2.28e-05 -0.15582 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000277402.1 MIR6891 -8312 2.61e-07 -0.348775 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000137310.11 TCF19 188462 3.49e-06 0.151476 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000204540.10 PSORS1C1 232254 1.1e-10 -0.366577 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000244731.7 C4A -635020 1.19e-09 -0.266971 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000204531.17 POU5F1 166273 8.55e-05 0.271061 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000228789.6 HCG22 293554 3.64e-05 -0.256397 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000137312.14 FLOT1 604271 5.43e-05 0.117601 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000204338.8 CYP21A1P -658685 2.56e-06 -0.263593 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000204536.13 CCHCR1 188766 9.94e-09 0.211465 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000204301.6 NOTCH4 -877063 2.28e-05 -0.15582 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000277402.1 MIR6891 -8312 2.61e-07 -0.348775 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000137310.11 TCF19 188462 3.49e-06 0.151476 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000204540.10 PSORS1C1 232254 1.1e-10 -0.366577 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000244731.7 C4A -635020 1.19e-09 -0.266971 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000204531.17 POU5F1 166273 8.55e-05 0.271061 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000228789.6 HCG22 293554 3.64e-05 -0.256397 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000137312.14 FLOT1 604271 5.43e-05 0.117601 9e-06 breast cancer 6_32699696 rs147527678 ENSG00000179344.16 HLA-DQB1 31313 1.36e-12 -0.522846 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000198502.5 HLA-DRB5 169409 3.8e-06 -0.370739 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000204301.6 NOTCH4 475629 2.12e-06 -0.195769 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000244731.7 C4A 717672 1.19e-09 -0.300503 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000232629.8 HLA-DQB2 -63838 1.2e-16 0.677688 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000204338.8 CYP21A1P 694007 2.65e-09 -0.372383 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000196301.3 HLA-DRB9 226196 1.05e-05 0.370226 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000240065.7 PSMB9 -154465 6.41e-08 0.230723 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000179344.16 HLA-DQB1 31313 1.36e-12 -0.522846 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000198502.5 HLA-DRB5 169409 3.8e-06 -0.370739 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000204301.6 NOTCH4 475629 2.12e-06 -0.195769 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000244731.7 C4A 717672 1.19e-09 -0.300503 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000232629.8 HLA-DQB2 -63838 1.2e-16 0.677688 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000204338.8 CYP21A1P 694007 2.65e-09 -0.372383 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000196301.3 HLA-DRB9 226196 1.05e-05 0.370226 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000240065.7 PSMB9 -154465 6.41e-08 0.230723 5e-07 breast cancer 6_33272092 rs17215231 ENSG00000231500.6 RPS18 44 2.14e-80 -0.720188 9e-13 breast cancer 6_33272092 rs17215231 ENSG00000235863.3 B3GALT4 -5040 1.94e-06 0.205957 9e-13 breast cancer 6_43259403 rs111342015 ENSG00000112667.12 DNPH1 29919 2.43e-15 -0.388966 9e-08 breast cancer 7_100437651 rs117911427 ENSG00000242294.6 STAG3L5P 101239 1.04e-13 0.958637 7e-06 breast cancer 7_100437651 rs117911427 ENSG00000085514.15 PILRA 64206 8.23e-08 0.606424 7e-06 breast cancer 7_100437651 rs117911427 ENSG00000166924.8 NYAP1 -46276 0.000177108 -0.36006 7e-06 breast cancer 7_100437651 rs117911427 ENSG00000121716.20 PILRB 85475 5.65e-13 0.883676 7e-06 breast cancer 7_102478605 rs369574511 ENSG00000005075.15 POLR2J -302 8.9e-09 0.141682 2e-07 breast cancer 7_102478605 rs369574511 ENSG00000233297.4 RASA4DP -211864 8.62e-09 0.365995 2e-07 breast cancer 7_102478605 rs369574511 ENSG00000105808.17 RASA4 -138152 1.17e-07 0.27634 2e-07 breast cancer 7_102478605 rs369574511 ENSG00000161036.12 LRWD1 13676 7.58e-14 -0.239269 2e-07 breast cancer 7_144351809 rs62485509 ENSG00000204959.4 ARHGEF34P 64843 2.91e-11 -0.458745 4e-12 breast cancer 7_144351809 rs62485509 ENSG00000244198.5 ARHGEF35-AS1 156951 3.99e-06 -0.392909 4e-12 breast cancer 7_144351809 rs62485509 ENSG00000170356.8 OR2A20P 98852 9.3e-06 0.365683 4e-12 breast cancer 7_144377836 rs720475 ENSG00000213214.4 ARHGEF35 189441 6.87e-06 0.303774 7e-11 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 5.86e-11 -0.389815 7e-11 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 1.45e-06 0.342059 7e-11 breast cancer 7_144377836 rs720475 ENSG00000213214.4 ARHGEF35 189441 6.87e-06 0.303774 7e-12 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 5.86e-11 -0.389815 7e-12 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 1.45e-06 0.342059 7e-12 breast cancer 7_144377836 rs720475 ENSG00000213214.4 ARHGEF35 189441 6.87e-06 0.303774 2e-11 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 5.86e-11 -0.389815 2e-11 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 1.45e-06 0.342059 2e-11 breast cancer 7_144377836 rs720475 ENSG00000213214.4 ARHGEF35 189441 6.87e-06 0.303774 4e-10 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 5.86e-11 -0.389815 4e-10 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 1.45e-06 0.342059 4e-10 breast cancer 7_144377836 rs720475 ENSG00000213214.4 ARHGEF35 189441 6.87e-06 0.303774 1e-11 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 5.86e-11 -0.389815 1e-11 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 1.45e-06 0.342059 1e-11 breast cancer 7_144377836 rs720475 ENSG00000213214.4 ARHGEF35 189441 6.87e-06 0.303774 1e-08 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 5.86e-11 -0.389815 1e-08 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 1.45e-06 0.342059 1e-08 breast cancer 7_144477198 rs13230714 ENSG00000204959.4 ARHGEF34P 190232 1.05e-05 -0.24679 1e-06 breast cancer 7_144477198 rs13230714 ENSG00000244198.5 ARHGEF35-AS1 282340 4.94e-05 -0.277344 1e-06 breast cancer 7_74696373 rs74910854 ENSG00000184616.8 SPDYE12 -216883 3.57e-05 0.456384 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000123965.13 PMS2P5 -197743 1.08e-11 0.734274 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000196275.13 GTF2IRD2 -155178 7.43e-17 0.596372 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000263001.5 GTF2I 38706 9.25e-16 0.344291 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000277053.4 GTF2IP1 -541323 1.27e-21 -0.857244 5e-06 breast cancer 8_220692 rs66823261 ENSG00000223508.5 RPL23AP53 -11444 1.15e-06 0.286451 6e-09 breast cancer 8_220692 rs66823261 ENSG00000223508.5 RPL23AP53 -11444 1.15e-06 0.286451 3e-07 breast cancer 8_220692 rs66823261 ENSG00000223508.5 RPL23AP53 -11444 1.15e-06 0.286451 3e-08 breast cancer 8_220692 rs66823261 ENSG00000223508.5 RPL23AP53 -11444 1.15e-06 0.286451 1e-08 breast cancer 8_30372068 rs7834448 ENSG00000254109.5 RBPMS-AS1 -13333 4.05e-08 -0.176901 7e-06 breast cancer 8_36990191 rs10086016 ENSG00000183779.6 ZNF703 -705560 8.27e-05 -0.184726 1e-08 breast cancer 8_36992428 rs4286946 ENSG00000183779.6 ZNF703 -703323 4.17e-05 -0.20794 9e-22 breast cancer 8_36995695 rs10096213 ENSG00000183779.6 ZNF703 -700056 4.61e-05 -0.190711 3e-09 breast cancer 8_36997193 rs10092900 ENSG00000183779.6 ZNF703 -698558 9.02e-05 -0.186433 2e-17 breast cancer 8_37000965 rs13365225 ENSG00000183779.6 ZNF703 -694786 9.02e-05 -0.186433 7e-06 breast cancer 8_37000965 rs13365225 ENSG00000183779.6 ZNF703 -694786 9.02e-05 -0.186433 1e-23 breast cancer 8_37000965 rs13365225 ENSG00000183779.6 ZNF703 -694786 9.02e-05 -0.186433 1e-20 breast cancer 8_37000965 rs13365225 ENSG00000183779.6 ZNF703 -694786 9.02e-05 -0.186433 1e-10 breast cancer 8_37000965 rs13365225 ENSG00000183779.6 ZNF703 -694786 9.02e-05 -0.186433 1e-08 breast cancer 9_104094512 rs4742903 ENSG00000136824.18 SMC2 252 1.57e-06 -0.141112 3e-08 breast cancer 9_104094512 rs4742903 ENSG00000136824.18 SMC2 252 1.57e-06 -0.141112 2e-07 breast cancer 9_133463535 rs3124765 ENSG00000175164.13 ABO 188321 1.98e-07 -0.306925 2e-06 breast cancer 9_133463535 rs3124765 ENSG00000148290.9 SURF1 106859 6.47e-14 0.3079 2e-06 breast cancer 9_5956008 rs10975370 ENSG00000099219.13 ERMP1 122891 4.73e-05 -0.127912 3e-06