DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE breast cancer 1_100414772 rs612683 ENSG00000079335.18 CDC14A 63038 5.88e-18 -0.39113 3e-07 breast cancer 1_100414772 rs612683 ENSG00000162692.10 VCAM1 -304970 5.96e-12 -0.316824 3e-07 breast cancer 1_10506158 rs616488 ENSG00000142657.20 PGD 107566 4.63e-07 0.26756 9e-09 breast cancer 1_10506158 rs616488 ENSG00000142657.20 PGD 107566 4.63e-07 0.26756 2e-23 breast cancer 1_10506158 rs616488 ENSG00000142657.20 PGD 107566 4.63e-07 0.26756 4e-18 breast cancer 1_10506158 rs616488 ENSG00000142657.20 PGD 107566 4.63e-07 0.26756 4e-11 breast cancer 1_10506158 rs616488 ENSG00000142657.20 PGD 107566 4.63e-07 0.26756 1e-08 breast cancer 1_10506158 rs616488 ENSG00000142657.20 PGD 107566 4.63e-07 0.26756 2e-10 breast cancer 1_10506158 rs616488 ENSG00000142657.20 PGD 107566 4.63e-07 0.26756 5e-20 breast cancer 1_10535965 rs2506889 ENSG00000142657.20 PGD 137373 7.77e-12 0.368769 2e-20 breast cancer 1_10536284 rs12375 ENSG00000142657.20 PGD 137692 7.77e-12 0.368769 1e-05 breast cancer 1_109637134 rs17024629 ENSG00000168765.16 GSTM4 -18947 2.77e-19 0.442765 3e-08 breast cancer 1_109637134 rs17024629 ENSG00000134222.16 PSRC1 353948 3.62e-05 0.093198 3e-08 breast cancer 1_109637134 rs17024629 ENSG00000134184.12 GSTM1 -50680 1.12e-05 0.394409 3e-08 breast cancer 1_109637134 rs17024629 ENSG00000213366.12 GSTM2 -30888 8.82e-05 0.0864778 3e-08 breast cancer 1_109637134 rs17024629 ENSG00000168765.16 GSTM4 -18947 2.77e-19 0.442765 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000134222.16 PSRC1 353948 3.62e-05 0.093198 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000134184.12 GSTM1 -50680 1.12e-05 0.394409 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000213366.12 GSTM2 -30888 8.82e-05 0.0864778 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000168765.16 GSTM4 -18947 2.77e-19 0.442765 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000134222.16 PSRC1 353948 3.62e-05 0.093198 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000134184.12 GSTM1 -50680 1.12e-05 0.394409 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000213366.12 GSTM2 -30888 8.82e-05 0.0864778 1e-06 breast cancer 1_113630788 rs1230666 ENSG00000116793.15 PHTF1 -128701 4.51e-09 0.325616 4e-10 breast cancer 1_113903258 rs7513707 ENSG00000118655.4 DCLRE1B -1944 2.27e-06 -0.0878764 2e-11 breast cancer 1_113903258 rs7513707 ENSG00000116793.15 PHTF1 143769 5.2e-07 -0.229452 2e-11 breast cancer 1_113903258 rs7513707 ENSG00000226167.1 AP4B1-AS1 46623 1.55e-10 -0.378607 2e-11 breast cancer 1_113905767 rs11552449 ENSG00000226167.1 AP4B1-AS1 49132 4.07e-10 -0.377115 2e-08 breast cancer 1_113905767 rs11552449 ENSG00000116793.15 PHTF1 146278 8.29e-07 -0.229637 2e-08 breast cancer 1_113905767 rs11552449 ENSG00000118655.4 DCLRE1B 565 2.34e-06 -0.0893967 2e-08 breast cancer 1_113905767 rs11552449 ENSG00000226167.1 AP4B1-AS1 49132 4.07e-10 -0.377115 6e-07 breast cancer 1_113905767 rs11552449 ENSG00000116793.15 PHTF1 146278 8.29e-07 -0.229637 6e-07 breast cancer 1_113905767 rs11552449 ENSG00000118655.4 DCLRE1B 565 2.34e-06 -0.0893967 6e-07 breast cancer 1_113905767 rs11552449 ENSG00000226167.1 AP4B1-AS1 49132 4.07e-10 -0.377115 1e-09 breast cancer 1_113905767 rs11552449 ENSG00000116793.15 PHTF1 146278 8.29e-07 -0.229637 1e-09 breast cancer 1_113905767 rs11552449 ENSG00000118655.4 DCLRE1B 565 2.34e-06 -0.0893967 1e-09 breast cancer 1_113905767 rs11552449 ENSG00000226167.1 AP4B1-AS1 49132 4.07e-10 -0.377115 5e-11 breast cancer 1_113905767 rs11552449 ENSG00000116793.15 PHTF1 146278 8.29e-07 -0.229637 5e-11 breast cancer 1_113905767 rs11552449 ENSG00000118655.4 DCLRE1B 565 2.34e-06 -0.0893967 5e-11 breast cancer 1_113905767 rs11552449 ENSG00000226167.1 AP4B1-AS1 49132 4.07e-10 -0.377115 3e-09 breast cancer 1_113905767 rs11552449 ENSG00000116793.15 PHTF1 146278 8.29e-07 -0.229637 3e-09 breast cancer 1_113905767 rs11552449 ENSG00000118655.4 DCLRE1B 565 2.34e-06 -0.0893967 3e-09 breast cancer 1_119942712 rs6697258 ENSG00000270392.2 PFN1P2 -491340 2.14e-07 0.521048 2e-15 breast cancer 1_119942712 rs6697258 ENSG00000270231.3 NBPF8 -493641 1.45e-05 0.500225 2e-15 breast cancer 1_121121848 rs369304377 ENSG00000213244.3 H3P4 3238 4.33e-05 0.212412 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000171943.11 SRGAP2C -62962 4.57e-16 -0.386994 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000270392.2 PFN1P2 687796 6.1e-39 0.583451 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000273136.6 NBPF26 397925 2.87e-21 0.549532 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000270231.3 NBPF8 685495 3.83e-39 0.66828 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000223345.3 H2BP1 4591 4.59e-05 0.210635 2e-29 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.44e-20 0.521703 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 2.03e-14 -0.353191 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000213244.3 H3P4 420205 0.000386923 0.178332 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.44e-20 0.521703 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 2.03e-14 -0.353191 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000213244.3 H3P4 420205 0.000386923 0.178332 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.44e-20 0.521703 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 2.03e-14 -0.353191 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000213244.3 H3P4 420205 0.000386923 0.178332 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.44e-20 0.521703 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 2.03e-14 -0.353191 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000213244.3 H3P4 420205 0.000386923 0.178332 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.44e-20 0.521703 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 2.03e-14 -0.353191 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000213244.3 H3P4 420205 0.000386923 0.178332 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.44e-20 0.521703 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 2.03e-14 -0.353191 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000213244.3 H3P4 420205 0.000386923 0.178332 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.44e-20 0.521703 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 2.03e-14 -0.353191 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000213244.3 H3P4 420205 0.000386923 0.178332 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.44e-20 0.521703 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 2.03e-14 -0.353191 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000213244.3 H3P4 420205 0.000386923 0.178332 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.44e-20 0.521703 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 2.03e-14 -0.353191 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000213244.3 H3P4 420205 0.000386923 0.178332 3e-27 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.94e-06 0.251664 5e-09 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.94e-06 0.251664 6e-10 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.94e-06 0.251664 8e-09 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.94e-06 0.251664 2e-07 breast cancer 1_149934520 rs11205303 ENSG00000159164.9 SV2A 16638 8.93e-05 0.1431 5e-07 breast cancer 1_149934520 rs11205303 ENSG00000261716.1 H2BC20P 85496 1.16e-05 0.159155 5e-07 breast cancer 1_149934520 rs11205303 ENSG00000159164.9 SV2A 16638 8.93e-05 0.1431 1e-14 breast cancer 1_149934520 rs11205303 ENSG00000261716.1 H2BC20P 85496 1.16e-05 0.159155 1e-14 breast cancer 1_149955122 rs12048493 ENSG00000261716.1 H2BC20P 106098 9.41e-06 0.159479 2e-09 breast cancer 1_149955122 rs12048493 ENSG00000159164.9 SV2A 37240 6.61e-05 0.144517 2e-09 breast cancer 1_149955122 rs12048493 ENSG00000261716.1 H2BC20P 106098 9.41e-06 0.159479 9e-14 breast cancer 1_149955122 rs12048493 ENSG00000159164.9 SV2A 37240 6.61e-05 0.144517 9e-14 breast cancer 1_149955122 rs12048493 ENSG00000261716.1 H2BC20P 106098 9.41e-06 0.159479 4e-14 breast cancer 1_149955122 rs12048493 ENSG00000159164.9 SV2A 37240 6.61e-05 0.144517 4e-14 breast cancer 1_149955122 rs12048493 ENSG00000261716.1 H2BC20P 106098 9.41e-06 0.159479 1e-09 breast cancer 1_149955122 rs12048493 ENSG00000159164.9 SV2A 37240 6.61e-05 0.144517 1e-09 breast cancer 1_155176305 rs4971059 ENSG00000160766.14 GBAP1 -51117 6.53e-17 -0.373453 2e-10 breast cancer 1_155176305 rs4971059 ENSG00000169241.17 SLC50A1 40961 4.75e-11 0.166041 2e-10 breast cancer 1_155176305 rs4971059 ENSG00000143537.13 ADAM15 125739 1.76e-08 -0.141808 2e-10 breast cancer 1_155176305 rs4971059 ENSG00000160766.14 GBAP1 -51117 6.53e-17 -0.373453 5e-11 breast cancer 1_155176305 rs4971059 ENSG00000169241.17 SLC50A1 40961 4.75e-11 0.166041 5e-11 breast cancer 1_155176305 rs4971059 ENSG00000143537.13 ADAM15 125739 1.76e-08 -0.141808 5e-11 breast cancer 1_155212052 rs2974935 ENSG00000169231.13 THBS3 4071 1.17e-09 0.106078 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000143537.13 ADAM15 161486 6.95e-10 -0.143877 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000143622.10 RIT1 -699352 2.74e-06 -0.156325 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000160766.14 GBAP1 -15370 5.96e-46 -0.548484 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000169241.17 SLC50A1 76708 2.32e-07 0.122654 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000225855.6 RUSC1-AS1 -109635 1.16e-08 0.129897 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000173171.14 MTX1 3353 4.45e-05 0.104397 2e-07 breast cancer 1_155212373 rs2075570 ENSG00000143622.10 RIT1 -699031 4.55e-06 -0.152788 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000169231.13 THBS3 4392 2.13e-09 0.104376 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000169241.17 SLC50A1 77029 4.67e-07 0.119514 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000143537.13 ADAM15 161807 1.28e-09 -0.141576 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000225855.6 RUSC1-AS1 -109314 1.45e-08 0.12893 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000160766.14 GBAP1 -15049 5.24e-47 -0.553036 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000173171.14 MTX1 3674 3.02e-05 0.106542 5e-06 breast cancer 1_155216951 rs1057941 ENSG00000169241.17 SLC50A1 81607 1.62e-06 0.116134 2e-07 breast cancer 1_155216951 rs1057941 ENSG00000143537.13 ADAM15 166385 1.66e-06 -0.114879 2e-07 breast cancer 1_155216951 rs1057941 ENSG00000160766.14 GBAP1 -10471 4.55e-23 -0.412209 2e-07 breast cancer 1_155216951 rs1057941 ENSG00000225855.6 RUSC1-AS1 -104736 2.54e-07 0.119962 2e-07 breast cancer 1_155216951 rs1057941 ENSG00000169231.13 THBS3 8970 0.000189525 0.0672128 2e-07 breast cancer 1_155216951 rs1057941 ENSG00000143622.10 RIT1 -694453 0.00025992 -0.124676 2e-07 breast cancer 1_155302483 rs7524950 ENSG00000132718.8 SYT11 -557026 6.62e-05 -0.0902963 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000143537.13 ADAM15 251917 3.76e-09 -0.15435 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000169231.13 THBS3 94502 0.000282577 0.0719283 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000143630.9 HCN3 24900 6.09e-09 -0.156406 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000143622.10 RIT1 -608921 3.26e-21 -0.339229 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000225855.6 RUSC1-AS1 -19204 3.94e-16 0.203475 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000160766.14 GBAP1 75061 2.92e-16 -0.381585 3e-09 breast cancer 1_155446537 rs10796944 ENSG00000160766.14 GBAP1 219115 1.63e-14 -0.379484 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000132676.15 DAP3 -241423 0.000274643 0.0654664 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000225855.6 RUSC1-AS1 124850 5.66e-11 0.175083 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000143622.10 RIT1 -464867 2.84e-18 -0.332394 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000132718.8 SYT11 -412972 3.24e-05 -0.0990944 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000143537.13 ADAM15 395971 2.86e-07 -0.142401 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000143630.9 HCN3 168954 1.72e-06 -0.13656 7e-10 breast cancer 1_155587180 rs12091730 ENSG00000225855.6 RUSC1-AS1 265493 6.6e-11 0.174586 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000132676.15 DAP3 -100780 0.000116707 0.0692983 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000143537.13 ADAM15 536614 4.91e-07 -0.139713 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000143630.9 HCN3 309597 2.33e-06 -0.134924 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000160766.14 GBAP1 359758 9.8e-14 -0.36891 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000143622.10 RIT1 -324224 5.65e-19 -0.338825 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000132718.8 SYT11 -272329 3.85e-05 -0.0982147 2e-10 breast cancer 1_155697170 rs348196 ENSG00000132676.15 DAP3 9210 3.91e-06 0.0799039 2e-08 breast cancer 1_155697170 rs348196 ENSG00000143537.13 ADAM15 646604 6.81e-08 -0.144487 2e-08 breast cancer 1_155697170 rs348196 ENSG00000143622.10 RIT1 -214234 8.12e-18 -0.317274 2e-08 breast cancer 1_155697170 rs348196 ENSG00000160766.14 GBAP1 469748 1.12e-13 -0.355633 2e-08 breast cancer 1_155697170 rs348196 ENSG00000225855.6 RUSC1-AS1 375483 9.29e-10 0.158618 2e-08 breast cancer 1_155697170 rs348196 ENSG00000163374.19 YY1AP1 8396 2.94e-05 -0.103661 2e-08 breast cancer 1_156183252 rs11264454 ENSG00000196189.12 SEMA4A 35886 1.18e-07 0.148495 7e-07 breast cancer 1_156183252 rs11264454 ENSG00000242252.1 BGLAP -58710 5.82e-05 -0.156434 7e-07 breast cancer 1_156183252 rs11264454 ENSG00000196189.12 SEMA4A 35886 1.18e-07 0.148495 2e-08 breast cancer 1_156183252 rs11264454 ENSG00000242252.1 BGLAP -58710 5.82e-05 -0.156434 2e-08 breast cancer 1_16013277 rs1763604 ENSG00000173641.17 HSPB7 -6317 1.2e-14 -0.270812 7e-09 breast cancer 1_16013277 rs1763604 ENSG00000186510.11 CLCNKA -5598 1.38e-13 -0.380516 7e-09 breast cancer 1_168127440 rs60504827 ENSG00000143147.14 GPR161 -10227 1.03e-14 0.25713 2e-07 breast cancer 1_168127440 rs60504827 ENSG00000143158.10 MPC2 190400 9.49e-06 -0.152943 2e-07 breast cancer 1_45918469 rs12077974 ENSG00000086015.20 MAST2 131482 7.2e-14 -0.240674 2e-07 breast cancer 1_45918469 rs12077974 ENSG00000117461.14 PIK3R3 -214567 0.000443076 -0.121912 2e-07 breast cancer 1_45918469 rs12077974 ENSG00000197429.10 IPP 167819 7.91e-09 -0.172691 2e-07 breast cancer 1_45918469 rs12077974 ENSG00000159592.10 GPBP1L1 231323 0.000490812 -0.100088 2e-07 breast cancer 1_46135245 rs1707302 ENSG00000171357.5 LURAP1 -68089 0.000205472 -0.206739 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000117461.14 PIK3R3 2209 5.25e-06 0.1574 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000197429.10 IPP 384595 1.22e-06 0.146209 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000086015.20 MAST2 348258 1.64e-16 0.26355 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000171357.5 LURAP1 -68089 0.000205472 -0.206739 3e-08 breast cancer 1_46135245 rs1707302 ENSG00000117461.14 PIK3R3 2209 5.25e-06 0.1574 3e-08 breast cancer 1_46135245 rs1707302 ENSG00000197429.10 IPP 384595 1.22e-06 0.146209 3e-08 breast cancer 1_46135245 rs1707302 ENSG00000086015.20 MAST2 348258 1.64e-16 0.26355 3e-08 breast cancer 1_7857016 rs707475 ENSG00000049245.12 VAMP3 85747 1.39e-05 -0.115647 1e-07 breast cancer 1_8035440 rs225132 ENSG00000116285.12 ERRFI1 9132 6.28e-05 -0.137894 3e-06 breast cancer 1_91555907 rs12134245 ENSG00000097046.12 CDC7 55014 1.42e-22 -0.212715 4e-06 breast cancer 10_102125800 rs10883710 ENSG00000120029.12 ARMH3 69607 0.000240751 0.107188 3e-06 breast cancer 10_121865675 rs10510102 ENSG00000226864.2 ATE1-AS1 -62637 1.24e-05 0.323005 2e-06 breast cancer 10_121904429 rs7899628 ENSG00000226864.2 ATE1-AS1 -23883 1.41e-20 -0.496899 9e-10 breast cancer 10_122041907 rs2253762 ENSG00000226864.2 ATE1-AS1 113595 4.55e-05 0.247525 2e-09 breast cancer 10_27080233 rs7918232 ENSG00000120539.14 MASTL -75034 2.81e-13 0.197907 8e-06 breast cancer 10_27080233 rs7918232 ENSG00000230445.4 LRRC37A6P -179222 5.53e-06 0.339431 8e-06 breast cancer 10_5752689 rs55910451 ENSG00000057608.16 GDI2 -89443 4.09e-13 -0.149758 4e-07 breast cancer 10_92172529 rs72807246 ENSG00000228701.1 TNKS2-DT 374238 9.94e-08 0.346216 3e-06 breast cancer 11_10299114 rs4345958 ENSG00000148926.9 ADM -5566 0.000193238 -0.0686656 3e-06 breast cancer 11_10299114 rs4345958 ENSG00000254554.1 ADM-DT -4590 0.000109893 -0.102101 3e-06 breast cancer 11_111636465 rs505372 ENSG00000137720.7 C11orf1 -242470 4.14e-06 0.148157 3e-06 breast cancer 11_111636465 rs505372 ENSG00000170276.5 HSPB2 -275777 5e-10 -0.203859 3e-06 breast cancer 11_111636465 rs505372 ENSG00000255561.6 FDXACB1 -244310 3.29e-05 0.133808 3e-06 breast cancer 11_111636465 rs505372 ENSG00000109846.7 CRYAB -287257 5.27e-10 -0.18918 3e-06 breast cancer 11_111636465 rs505372 ENSG00000170145.4 SIK2 34074 4.63e-10 -0.197111 3e-06 breast cancer 11_111765903 rs643506 ENSG00000137713.15 PPP2R1B -524 2.69e-12 -0.166046 2e-07 breast cancer 11_117214494 rs77683187 ENSG00000168092.13 PAFAH1B2 70227 8.84e-05 -0.134694 2e-06 breast cancer 11_11964514 rs3206824 ENSG00000170242.17 USP47 123091 3.63e-05 0.111443 4e-06 breast cancer 11_120362917 rs7924772 ENSG00000181264.8 TLCD5 37788 1.07e-05 0.100464 4e-08 breast cancer 11_18642694 rs10832963 ENSG00000179119.14 SPTY2D1 7903 5.95e-67 -0.59551 9e-06 breast cancer 11_1871355 rs4980389 ENSG00000130592.15 LSP1 18385 4.91e-14 0.342166 4e-07 breast cancer 11_1871355 rs4980389 ENSG00000283787.1 PRR33 -20417 5.7e-10 0.288909 4e-07 breast cancer 11_1874478 rs4980386 ENSG00000130592.15 LSP1 21508 6.53e-13 0.325989 9e-17 breast cancer 11_1874478 rs4980386 ENSG00000283787.1 PRR33 -17294 4.08e-09 0.273488 9e-17 breast cancer 11_1877434 rs1973765 ENSG00000130592.15 LSP1 24464 2.26e-13 0.323423 1e-37 breast cancer 11_1877434 rs1973765 ENSG00000283787.1 PRR33 -14338 9.67e-10 0.27648 1e-37 breast cancer 11_1880867 rs4980383 ENSG00000283787.1 PRR33 -10905 2.1e-08 -0.26063 9e-09 breast cancer 11_1880867 rs4980383 ENSG00000130592.15 LSP1 27897 1.35e-10 -0.292466 9e-09 breast cancer 11_1880867 rs4980383 ENSG00000283787.1 PRR33 -10905 2.1e-08 -0.26063 3e-06 breast cancer 11_1880867 rs4980383 ENSG00000130592.15 LSP1 27897 1.35e-10 -0.292466 3e-06 breast cancer 11_1887776 rs3817198 ENSG00000130592.15 LSP1 34806 5.82e-05 -0.193087 3e-09 breast cancer 11_1887776 rs3817198 ENSG00000130592.15 LSP1 34806 5.82e-05 -0.193087 6e-21 breast cancer 11_1887776 rs3817198 ENSG00000130592.15 LSP1 34806 5.82e-05 -0.193087 2e-13 breast cancer 11_1887776 rs3817198 ENSG00000130592.15 LSP1 34806 5.82e-05 -0.193087 1e-10 breast cancer 11_1887776 rs3817198 ENSG00000130592.15 LSP1 34806 5.82e-05 -0.193087 1e-18 breast cancer 11_1887776 rs3817198 ENSG00000130592.15 LSP1 34806 5.82e-05 -0.193087 2e-11 breast cancer 11_1892909 rs576603 ENSG00000283787.1 PRR33 1137 2.21e-06 0.219449 2e-08 breast cancer 11_1892909 rs576603 ENSG00000130592.15 LSP1 39939 6.57e-10 0.279431 2e-08 breast cancer 11_1920716 rs909116 ENSG00000283787.1 PRR33 28944 4.89e-06 0.206488 7e-07 breast cancer 11_1920716 rs909116 ENSG00000130592.15 LSP1 67746 1.03e-06 0.217076 7e-07 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 2.17e-21 -0.354236 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 0.000240684 0.183913 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000175334.7 BANF1 -186582 3.56e-08 0.0625651 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172757.12 CFL1 -46351 6.11e-05 0.0447575 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172638.12 EFEMP2 -57997 2.84e-15 -0.112877 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172500.12 FIBP -72944 1.47e-08 -0.111398 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000175376.8 EIF1AD -186483 1.81e-13 -0.178362 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 2.17e-21 -0.354236 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 0.000240684 0.183913 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000175334.7 BANF1 -186582 3.56e-08 0.0625651 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172757.12 CFL1 -46351 6.11e-05 0.0447575 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172638.12 EFEMP2 -57997 2.84e-15 -0.112877 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172500.12 FIBP -72944 1.47e-08 -0.111398 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000175376.8 EIF1AD -186483 1.81e-13 -0.178362 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 2.17e-21 -0.354236 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 0.000240684 0.183913 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000175334.7 BANF1 -186582 3.56e-08 0.0625651 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172757.12 CFL1 -46351 6.11e-05 0.0447575 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172638.12 EFEMP2 -57997 2.84e-15 -0.112877 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172500.12 FIBP -72944 1.47e-08 -0.111398 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000175376.8 EIF1AD -186483 1.81e-13 -0.178362 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 2.17e-21 -0.354236 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 0.000240684 0.183913 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000175334.7 BANF1 -186582 3.56e-08 0.0625651 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172757.12 CFL1 -46351 6.11e-05 0.0447575 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172638.12 EFEMP2 -57997 2.84e-15 -0.112877 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172500.12 FIBP -72944 1.47e-08 -0.111398 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000175376.8 EIF1AD -186483 1.81e-13 -0.178362 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 2.17e-21 -0.354236 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 0.000240684 0.183913 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000175334.7 BANF1 -186582 3.56e-08 0.0625651 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172757.12 CFL1 -46351 6.11e-05 0.0447575 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172638.12 EFEMP2 -57997 2.84e-15 -0.112877 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172500.12 FIBP -72944 1.47e-08 -0.111398 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000175376.8 EIF1AD -186483 1.81e-13 -0.178362 1e-10 breast cancer 11_65935052 rs617791 ENSG00000172638.12 EFEMP2 61460 6.1e-08 -0.0803351 7e-06 breast cancer 11_65935052 rs617791 ENSG00000175376.8 EIF1AD -67026 1.87e-30 -0.2703 7e-06 breast cancer 11_65935052 rs617791 ENSG00000175334.7 BANF1 -67125 2.19e-19 0.100929 7e-06 breast cancer 11_65935052 rs617791 ENSG00000172803.17 SNX32 101411 1.25e-13 -0.287246 7e-06 breast cancer 11_66324772 rs118151305 ENSG00000175334.7 BANF1 322595 0.000514543 0.072729 6e-09 breast cancer 11_66843174 rs7570 ENSG00000248746.5 ACTN3 296779 1.32e-08 0.335439 8e-06 breast cancer 11_66843174 rs7570 ENSG00000173621.8 LRFN4 -13473 3.02e-07 -0.137112 8e-06 breast cancer 11_66843174 rs7570 ENSG00000174080.10 CTSF 274333 4.85e-39 0.278098 8e-06 breast cancer 11_68164294 rs4930561 ENSG00000110721.11 CHKA 42850 3.27e-06 -0.144566 3e-07 breast cancer 11_803017 rs6597981 ENSG00000177830.17 CHID1 -112041 5.13e-06 -0.170654 1e-12 breast cancer 11_803017 rs6597981 ENSG00000177600.8 RPLP2 -6737 2.32e-11 0.117224 1e-12 breast cancer 11_803017 rs6597981 ENSG00000177697.17 CD151 -29867 0.000115326 0.107141 1e-12 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 3.75e-46 0.37579 1e-12 breast cancer 11_803017 rs6597981 ENSG00000177595.17 PIDD1 -6629 1.43e-26 0.270622 1e-12 breast cancer 11_803017 rs6597981 ENSG00000177830.17 CHID1 -112041 5.13e-06 -0.170654 3e-12 breast cancer 11_803017 rs6597981 ENSG00000177600.8 RPLP2 -6737 2.32e-11 0.117224 3e-12 breast cancer 11_803017 rs6597981 ENSG00000177697.17 CD151 -29867 0.000115326 0.107141 3e-12 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 3.75e-46 0.37579 3e-12 breast cancer 11_803017 rs6597981 ENSG00000177595.17 PIDD1 -6629 1.43e-26 0.270622 3e-12 breast cancer 12_120997672 rs2464195 ENSG00000157895.11 C12orf43 -18830 4.39e-08 -0.190737 3e-08 breast cancer 12_120997672 rs2464195 ENSG00000157837.15 SPPL3 93301 1.13e-05 -0.0982923 3e-08 breast cancer 14_68567965 rs999737 ENSG00000185650.9 ZFP36L1 -228288 5.07e-05 0.18556 7e-39 breast cancer 14_68567965 rs999737 ENSG00000185650.9 ZFP36L1 -228288 5.07e-05 0.18556 3e-19 breast cancer 14_68567965 rs999737 ENSG00000185650.9 ZFP36L1 -228288 5.07e-05 0.18556 2e-21 breast cancer 14_68567965 rs999737 ENSG00000185650.9 ZFP36L1 -228288 5.07e-05 0.18556 1e-38 breast cancer 14_68567965 rs999737 ENSG00000185650.9 ZFP36L1 -228288 5.07e-05 0.18556 4e-13 breast cancer 14_68567965 rs999737 ENSG00000185650.9 ZFP36L1 -228288 5.07e-05 0.18556 3e-08 breast cancer 14_68567965 rs999737 ENSG00000185650.9 ZFP36L1 -228288 5.07e-05 0.18556 2e-07 breast cancer 15_49580388 rs8027730 ENSG00000166262.15 FAM227B -40543 2.1e-09 0.282836 3e-08 breast cancer 15_50402109 rs4774565 ENSG00000244879.6 GABPB1-AS1 46700 1.29e-18 -0.452771 2e-06 breast cancer 15_50402109 rs4774565 ENSG00000104064.16 GABPB1 47151 2.38e-08 -0.147525 2e-06 breast cancer 15_74300521 rs12904134 ENSG00000178718.6 RPP25 -656697 4.84e-06 -0.175023 8e-06 breast cancer 15_74300521 rs12904134 ENSG00000178802.17 MPI -589484 0.000176427 0.112175 8e-06 breast cancer 15_74300521 rs12904134 ENSG00000140474.12 ULK3 -542676 2.74e-07 -0.114555 8e-06 breast cancer 15_74843920 rs6938 ENSG00000178802.17 MPI -46085 1.71e-19 0.274319 9e-08 breast cancer 15_74843920 rs6938 ENSG00000178718.6 RPP25 -113298 4.22e-15 -0.31006 9e-08 breast cancer 15_74843920 rs6938 ENSG00000140474.12 ULK3 723 2.13e-19 -0.205407 9e-08 breast cancer 15_74854991 rs1869959 ENSG00000178802.17 MPI -35014 3.56e-26 0.315064 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000140474.12 ULK3 11794 6.82e-27 -0.239469 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000178718.6 RPP25 -102227 8.13e-18 -0.336387 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000178802.17 MPI -35014 3.56e-26 0.315064 4e-07 breast cancer 15_74854991 rs1869959 ENSG00000140474.12 ULK3 11794 6.82e-27 -0.239469 4e-07 breast cancer 15_74854991 rs1869959 ENSG00000178718.6 RPP25 -102227 8.13e-18 -0.336387 4e-07 breast cancer 15_74854991 rs1869959 ENSG00000178802.17 MPI -35014 3.56e-26 0.315064 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000140474.12 ULK3 11794 6.82e-27 -0.239469 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000178718.6 RPP25 -102227 8.13e-18 -0.336387 5e-08 breast cancer 15_75516399 rs8027365 ENSG00000140398.13 NEIL1 169237 4.31e-12 0.147772 1e-07 breast cancer 15_75516399 rs8027365 ENSG00000140400.16 MAN2C1 148245 6.18e-66 0.670246 1e-07 breast cancer 15_75516399 rs8027365 ENSG00000169371.13 SNUPN -110070 4.7e-13 0.255515 1e-07 breast cancer 15_79777420 rs166870 ENSG00000136371.10 MTHFS -119959 2.14e-10 -0.393376 3e-07 breast cancer 15_79777420 rs166870 ENSG00000180953.11 ST20 -137836 0.000184431 -0.17187 3e-07 breast cancer 15_90965985 rs77554484 ENSG00000166965.12 RCCD1 10189 7.5e-06 0.133131 1e-15 breast cancer 15_90968837 rs2290203 ENSG00000140553.17 UNC45A 34860 1.07e-06 0.164801 8e-10 breast cancer 15_90968837 rs2290203 ENSG00000140553.17 UNC45A 34860 1.07e-06 0.164801 4e-08 breast cancer 15_90968837 rs2290203 ENSG00000140553.17 UNC45A 34860 1.07e-06 0.164801 2e-19 breast cancer 16_56387075 rs2432539 ENSG00000159461.14 AMFR -38463 1.38e-07 0.131338 3e-10 breast cancer 16_56387075 rs2432539 ENSG00000125124.11 BBS2 -133208 5.85e-23 -0.310012 3e-10 breast cancer 16_56387075 rs2432539 ENSG00000087263.16 OGFOD1 -64415 2.04e-13 -0.104889 3e-10 breast cancer 16_56387075 rs2432539 ENSG00000159461.14 AMFR -38463 1.38e-07 0.131338 4e-08 breast cancer 16_56387075 rs2432539 ENSG00000125124.11 BBS2 -133208 5.85e-23 -0.310012 4e-08 breast cancer 16_56387075 rs2432539 ENSG00000087263.16 OGFOD1 -64415 2.04e-13 -0.104889 4e-08 breast cancer 16_56497273 rs2303282 ENSG00000087263.16 OGFOD1 45783 9.43e-17 -0.120942 3e-07 breast cancer 16_56497273 rs2303282 ENSG00000159461.14 AMFR 71735 3.56e-08 0.14106 3e-07 breast cancer 16_56497273 rs2303282 ENSG00000125124.11 BBS2 -23010 1e-21 -0.310445 3e-07 breast cancer 16_71475893 rs8050871 ENSG00000040199.18 PHLPP2 -248808 1.53e-05 -0.10851 3e-06 breast cancer 16_71475893 rs8050871 ENSG00000167377.17 ZNF23 12798 0.000164196 -0.0973411 3e-06 breast cancer 16_71475893 rs8050871 ENSG00000157429.15 ZNF19 -89196 0.000246737 0.112244 3e-06 breast cancer 17_2195889 rs16952006 ENSG00000167720.12 SRR -107494 2.59e-12 -0.503724 3e-06 breast cancer 17_30560116 rs111780165 ENSG00000264538.6 SUZ12P1 -149183 3.48e-05 0.331892 8e-08 breast cancer 17_30689342 rs8081187 ENSG00000264538.6 SUZ12P1 -19957 5.55e-06 0.31772 2e-07 breast cancer 17_30884649 rs7223535 ENSG00000264538.6 SUZ12P1 175350 1.1e-09 0.260397 4e-10 breast cancer 17_30884649 rs7223535 ENSG00000172171.10 TEFM -22171 2.04e-06 0.156055 4e-10 breast cancer 17_30884649 rs7223535 ENSG00000176390.11 CRLF3 59873 6.93e-08 0.130506 4e-10 breast cancer 17_30887862 rs113934718 ENSG00000264538.6 SUZ12P1 178563 1.39e-09 0.258447 1e-08 breast cancer 17_30887862 rs113934718 ENSG00000172171.10 TEFM -18958 9.31e-07 0.160814 1e-08 breast cancer 17_30887862 rs113934718 ENSG00000176390.11 CRLF3 63086 1.04e-07 0.128596 1e-08 breast cancer 17_30894259 rs62070652 ENSG00000264538.6 SUZ12P1 184960 1.39e-09 0.258447 6e-09 breast cancer 17_30894259 rs62070652 ENSG00000176390.11 CRLF3 69483 1.04e-07 0.128596 6e-09 breast cancer 17_30894259 rs62070652 ENSG00000172171.10 TEFM -12561 9.31e-07 0.160814 6e-09 breast cancer 17_30894259 rs62070652 ENSG00000264538.6 SUZ12P1 184960 1.39e-09 0.258447 1e-06 breast cancer 17_30894259 rs62070652 ENSG00000176390.11 CRLF3 69483 1.04e-07 0.128596 1e-06 breast cancer 17_30894259 rs62070652 ENSG00000172171.10 TEFM -12561 9.31e-07 0.160814 1e-06 breast cancer 17_45394123 rs4763 ENSG00000136448.11 NMT1 342461 1.54e-05 -0.135558 2e-08 breast cancer 17_45394123 rs4763 ENSG00000263503.1 MAPK8IP1P2 -208217 8.27e-67 1.14008 2e-08 breast cancer 17_45394123 rs4763 ENSG00000225190.10 PLEKHM1 -96626 8.93e-10 0.131527 2e-08 breast cancer 17_45394123 rs4763 ENSG00000204650.14 LINC02210 -226205 1.29e-78 1.18031 2e-08 breast cancer 17_45394123 rs4763 ENSG00000214401.4 KANSL1-AS1 -799453 6.57e-62 1.09704 2e-08 breast cancer 17_45394123 rs4763 ENSG00000264070.1 DND1P1 -191748 1.45e-49 1.08981 2e-08 breast cancer 17_45394123 rs4763 ENSG00000214425.7 LRRC37A4P -156212 6.93e-69 -1.03605 2e-08 breast cancer 17_45394123 rs4763 ENSG00000120071.13 KANSL1 -831266 1.2e-11 0.240607 2e-08 breast cancer 17_45941122 rs62061734 ENSG00000204650.14 LINC02210 320794 7e-137 1.26855 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000073969.18 NSF -649547 5.46e-09 0.197923 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000264070.1 DND1P1 355251 3.06e-72 1.15572 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000185829.17 ARL17A -638560 1.4e-15 0.60394 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000238083.7 LRRC37A2 -570389 1.38e-41 0.889398 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214425.7 LRRC37A4P 390787 5.33e-93 -1.05374 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000136448.11 NMT1 889460 4.52e-05 -0.118309 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000120071.13 KANSL1 -284267 2.83e-14 0.247557 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000263503.1 MAPK8IP1P2 338782 6.54e-89 1.15633 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214401.4 KANSL1-AS1 -252454 1.32e-86 1.13418 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000225190.10 PLEKHM1 450373 4.36e-07 0.100897 8e-12 breast cancer 17_46751565 rs199533 ENSG00000073969.18 NSF 160896 1.49e-08 0.192913 5e-08 breast cancer 17_46751565 rs199533 ENSG00000120071.13 KANSL1 526176 3.13e-17 0.273337 5e-08 breast cancer 17_46751565 rs199533 ENSG00000238083.7 LRRC37A2 240054 6.59e-39 0.867333 5e-08 breast cancer 17_46751565 rs199533 ENSG00000185829.17 ARL17A 171883 2.34e-18 0.657918 5e-08 breast cancer 17_46751565 rs199533 ENSG00000214401.4 KANSL1-AS1 557989 9.51e-120 1.24423 5e-08 breast cancer 17_46788237 rs199498 ENSG00000185829.17 ARL17A 208555 1.54e-11 0.493387 2e-08 breast cancer 17_46788237 rs199498 ENSG00000238083.7 LRRC37A2 276726 1.07e-28 0.724029 2e-08 breast cancer 17_46788237 rs199498 ENSG00000214401.4 KANSL1-AS1 594661 1.18e-63 0.979343 2e-08 breast cancer 17_46788237 rs199498 ENSG00000073969.18 NSF 197568 2.24e-08 0.18188 2e-08 breast cancer 17_46788237 rs199498 ENSG00000120071.13 KANSL1 562848 9.75e-12 0.213535 2e-08 breast cancer 17_50196930 rs2075555 ENSG00000108823.15 SGCA 30945 1e-05 -0.328266 8e-08 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 2.36e-36 -0.578642 1e-08 breast cancer 17_54979110 rs6504950 ENSG00000141198.14 TOM1L1 79723 4.01e-05 -0.132232 1e-08 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 2.36e-36 -0.578642 8e-09 breast cancer 17_54979110 rs6504950 ENSG00000141198.14 TOM1L1 79723 4.01e-05 -0.132232 8e-09 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 2.36e-36 -0.578642 2e-13 breast cancer 17_54979110 rs6504950 ENSG00000141198.14 TOM1L1 79723 4.01e-05 -0.132232 2e-13 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 2.36e-36 -0.578642 5e-12 breast cancer 17_54979110 rs6504950 ENSG00000141198.14 TOM1L1 79723 4.01e-05 -0.132232 5e-12 breast cancer 17_55132413 rs2787486 ENSG00000166263.13 STXBP4 163627 1.44e-32 -0.527536 6e-29 breast cancer 17_55132413 rs2787486 ENSG00000166263.13 STXBP4 163627 1.44e-32 -0.527536 2e-34 breast cancer 17_55135212 rs2628317 ENSG00000166263.13 STXBP4 166426 2.61e-32 -0.567227 4e-16 breast cancer 17_68904663 rs36059695 ENSG00000141338.13 ABCA8 -50729 3.3e-06 -0.355894 6e-08 breast cancer 17_74776908 rs62084913 ENSG00000109062.11 SLC9A3R1 27995 7.16e-05 -0.137383 9e-06 breast cancer 17_7668434 rs78378222 ENSG00000141510.16 TP53 -9000 9.07e-06 -0.47376 1e-08 breast cancer 17_7668434 rs78378222 ENSG00000141510.16 TP53 -9000 9.07e-06 -0.47376 2e-09 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 7.54e-40 -0.396799 6e-06 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 7.54e-40 -0.396799 4e-10 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 7.54e-40 -0.396799 5e-07 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 7.54e-40 -0.396799 1e-09 breast cancer 17_82597601 rs62079673 ENSG00000141580.15 WDR45B -50952 2.68e-08 0.105494 1e-06 breast cancer 17_82946434 rs898097 ENSG00000141560.14 FN3KRP 229751 1.21e-17 -0.251882 2e-06 breast cancer 19_17099805 rs7249698 ENSG00000099331.13 MYO9B 24024 1.02e-10 -0.130688 4e-07 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 4.76e-05 0.116368 7e-21 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 9.57e-05 0.19549 7e-21 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 6.04e-08 -0.176395 7e-21 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 4.76e-05 0.116368 2e-06 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 9.57e-05 0.19549 2e-06 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 6.04e-08 -0.176395 2e-06 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 4.76e-05 0.116368 2e-09 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 9.57e-05 0.19549 2e-09 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 6.04e-08 -0.176395 2e-09 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 4.76e-05 0.116368 1e-12 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 9.57e-05 0.19549 1e-12 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 6.04e-08 -0.176395 1e-12 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 4.76e-05 0.116368 4e-13 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 9.57e-05 0.19549 4e-13 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 6.04e-08 -0.176395 4e-13 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 4.76e-05 0.116368 9e-13 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 9.57e-05 0.19549 9e-13 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 6.04e-08 -0.176395 9e-13 breast cancer 19_17279482 rs4808075 ENSG00000127220.5 ABHD8 -30754 5.14e-06 0.116788 2e-09 breast cancer 19_17279482 rs4808075 ENSG00000127220.5 ABHD8 -30754 5.14e-06 0.116788 4e-07 breast cancer 19_17282085 rs8100241 ENSG00000130312.6 MRPL34 -10747 1.24e-05 0.110048 4e-08 breast cancer 19_17283116 rs56069439 ENSG00000127220.5 ABHD8 -27120 4.63e-06 0.117192 1e-32 breast cancer 19_17283116 rs56069439 ENSG00000127220.5 ABHD8 -27120 4.63e-06 0.117192 9e-09 breast cancer 19_17283116 rs56069439 ENSG00000127220.5 ABHD8 -27120 4.63e-06 0.117192 8e-19 breast cancer 19_17283315 rs2363956 ENSG00000130312.6 MRPL34 -9517 1.84e-06 0.119849 2e-06 breast cancer 19_17283315 rs2363956 ENSG00000130312.6 MRPL34 -9517 1.84e-06 0.119849 2e-08 breast cancer 19_17290595 rs67397200 ENSG00000127220.5 ABHD8 -19641 2.13e-06 0.11956 3e-37 breast cancer 19_17290595 rs67397200 ENSG00000127220.5 ABHD8 -19641 2.13e-06 0.11956 2e-08 breast cancer 19_17290595 rs67397200 ENSG00000127220.5 ABHD8 -19641 2.13e-06 0.11956 3e-17 breast cancer 19_18422832 rs7258465 ENSG00000105655.18 ISYNA1 -15469 5.13e-10 0.188625 3e-28 breast cancer 19_18422832 rs7258465 ENSG00000130511.15 SSBP4 3968 3.17e-13 -0.192334 3e-28 breast cancer 19_18460331 rs4808801 ENSG00000105655.18 ISYNA1 22030 1.68e-10 0.193777 6e-06 breast cancer 19_18460331 rs4808801 ENSG00000130511.15 SSBP4 41467 7.28e-13 -0.189684 6e-06 breast cancer 19_18460331 rs4808801 ENSG00000105655.18 ISYNA1 22030 1.68e-10 0.193777 2e-31 breast cancer 19_18460331 rs4808801 ENSG00000130511.15 SSBP4 41467 7.28e-13 -0.189684 2e-31 breast cancer 19_18460331 rs4808801 ENSG00000105655.18 ISYNA1 22030 1.68e-10 0.193777 5e-15 breast cancer 19_18460331 rs4808801 ENSG00000130511.15 SSBP4 41467 7.28e-13 -0.189684 5e-15 breast cancer 19_18460331 rs4808801 ENSG00000105655.18 ISYNA1 22030 1.68e-10 0.193777 6e-14 breast cancer 19_18460331 rs4808801 ENSG00000130511.15 SSBP4 41467 7.28e-13 -0.189684 6e-14 breast cancer 19_18460331 rs4808801 ENSG00000105655.18 ISYNA1 22030 1.68e-10 0.193777 5e-28 breast cancer 19_18460331 rs4808801 ENSG00000130511.15 SSBP4 41467 7.28e-13 -0.189684 5e-28 breast cancer 19_18460331 rs4808801 ENSG00000105655.18 ISYNA1 22030 1.68e-10 0.193777 4e-15 breast cancer 19_18460331 rs4808801 ENSG00000130511.15 SSBP4 41467 7.28e-13 -0.189684 4e-15 breast cancer 19_18522945 rs172032 ENSG00000006015.17 REX1BD -65780 7.62e-05 -0.109289 1e-16 breast cancer 19_18522945 rs172032 ENSG00000130511.15 SSBP4 104081 2.87e-09 -0.147436 1e-16 breast cancer 19_18522945 rs172032 ENSG00000105655.18 ISYNA1 84644 2.56e-09 0.168576 1e-16 breast cancer 19_19417997 rs1469713 ENSG00000250067.11 YJEFN3 -111367 2.25e-05 -0.0983591 1e-10 breast cancer 19_19417997 rs1469713 ENSG00000213996.12 TM6SF2 144606 1e-24 0.355217 1e-10 breast cancer 19_19417997 rs1469713 ENSG00000187664.8 HAPLN4 155201 1.03e-11 0.328885 1e-10 breast cancer 19_19417997 rs1469713 ENSG00000064547.13 LPAR2 -210933 7.85e-07 -0.12666 1e-10 breast cancer 19_19417997 rs1469713 ENSG00000129933.20 MAU2 97152 5.94e-06 -0.0963282 1e-10 breast cancer 19_19417997 rs1469713 ENSG00000167491.17 GATAD2A 32171 5.04e-10 0.0710074 1e-10 breast cancer 19_19434887 rs2965183 ENSG00000187664.8 HAPLN4 172091 9.45e-12 0.331504 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000167491.17 GATAD2A 49061 3.54e-10 0.0720553 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000064547.13 LPAR2 -194043 4.43e-07 -0.13021 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000250067.11 YJEFN3 -94477 2.29e-05 -0.0988744 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000213996.12 TM6SF2 161496 1.08e-24 0.357214 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000129933.20 MAU2 114042 4.09e-06 -0.0985617 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000187664.8 HAPLN4 172091 9.45e-12 0.331504 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000167491.17 GATAD2A 49061 3.54e-10 0.0720553 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000064547.13 LPAR2 -194043 4.43e-07 -0.13021 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000250067.11 YJEFN3 -94477 2.29e-05 -0.0988744 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000213996.12 TM6SF2 161496 1.08e-24 0.357214 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000129933.20 MAU2 114042 4.09e-06 -0.0985617 1e-11 breast cancer 19_19535463 rs2304098 ENSG00000213996.12 TM6SF2 262072 5.32e-25 0.35845 2e-11 breast cancer 19_19535463 rs2304098 ENSG00000129933.20 MAU2 214618 2.48e-06 -0.100467 2e-11 breast cancer 19_19535463 rs2304098 ENSG00000250067.11 YJEFN3 6099 3.19e-05 -0.0969347 2e-11 breast cancer 19_19535463 rs2304098 ENSG00000187664.8 HAPLN4 272667 2e-11 0.325731 2e-11 breast cancer 19_19535463 rs2304098 ENSG00000064547.13 LPAR2 -93467 1.03e-06 -0.12581 2e-11 breast cancer 19_19535463 rs2304098 ENSG00000167491.17 GATAD2A 149637 5.43e-10 0.0711517 2e-11 breast cancer 19_2226677 rs3815308 ENSG00000104899.7 AMH -22632 1.51e-06 0.232839 7e-06 breast cancer 19_43779080 rs1685191 ENSG00000176222.8 ZNF404 -104971 2.35e-06 -0.109164 4e-20 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.55e-07 -0.245789 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 2.65e-07 -0.115704 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 6.5e-05 -0.13691 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.55e-07 -0.245789 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 2.65e-07 -0.115704 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 6.5e-05 -0.13691 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.55e-07 -0.245789 8e-09 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 2.65e-07 -0.115704 8e-09 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 6.5e-05 -0.13691 8e-09 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.55e-07 -0.245789 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 2.65e-07 -0.115704 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 6.5e-05 -0.13691 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.55e-07 -0.245789 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 2.65e-07 -0.115704 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 6.5e-05 -0.13691 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.55e-07 -0.245789 1e-16 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 2.65e-07 -0.115704 1e-16 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 6.5e-05 -0.13691 1e-16 breast cancer 19_43919418 rs375066 ENSG00000176222.8 ZNF404 35367 2.21e-14 -0.168862 2e-14 breast cancer 19_43919418 rs375066 ENSG00000204920.10 ZNF155 -48444 1.92e-05 -0.201799 2e-14 breast cancer 19_43919418 rs375066 ENSG00000159871.14 LYPD5 92212 2.88e-05 -0.143575 2e-14 breast cancer 19_51869723 rs10411161 ENSG00000198093.10 ZNF649 -35317 5.76e-10 -0.219783 7e-06 breast cancer 19_51869723 rs10411161 ENSG00000161551.14 ZNF577 -18253 3.21e-05 -0.0983299 7e-06 breast cancer 19_51942133 rs8113308 ENSG00000197608.11 ZNF841 -153632 8.68e-06 0.168965 6e-07 breast cancer 19_51942133 rs8113308 ENSG00000269235.1 ZNF350-AS1 -7001 4.58e-14 0.64442 6e-07 breast cancer 2_171568284 rs11675683 ENSG00000071967.11 CYBRD1 46037 2.02e-09 0.109133 4e-08 breast cancer 2_201003582 rs112257290 ENSG00000064012.21 CASP8 -229861 4.96e-06 -0.455673 2e-07 breast cancer 2_201258707 rs3769821 ENSG00000155749.12 FLACC1 -98691 6.71e-10 -0.183382 4e-18 breast cancer 2_201258707 rs3769821 ENSG00000064012.21 CASP8 25264 2.74e-64 0.594918 4e-18 breast cancer 2_201279205 rs10931936 ENSG00000155749.12 FLACC1 -78193 5.38e-10 -0.2009 6e-06 breast cancer 2_201279205 rs10931936 ENSG00000240344.8 PPIL3 389902 0.000260624 -0.211234 6e-06 breast cancer 2_201279205 rs10931936 ENSG00000064012.21 CASP8 45762 6.94e-62 0.63943 6e-06 breast cancer 2_201288355 rs1035142 ENSG00000064012.21 CASP8 54912 2.25e-73 0.61483 3e-09 breast cancer 2_201288355 rs1035142 ENSG00000155749.12 FLACC1 -69043 1.01e-10 -0.189224 3e-09 breast cancer 2_201288502 rs700635 ENSG00000155749.12 FLACC1 -68896 4.58e-10 -0.201666 5e-16 breast cancer 2_201288502 rs700635 ENSG00000240344.8 PPIL3 399199 0.000196087 -0.215336 5e-16 breast cancer 2_201288502 rs700635 ENSG00000064012.21 CASP8 55059 9.39e-62 0.638885 5e-16 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 4.93e-10 -0.200862 6e-24 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 1.99e-60 0.632455 6e-24 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 0.00014871 -0.218783 6e-24 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 4.93e-10 -0.200862 7e-07 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 1.99e-60 0.632455 7e-07 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 0.00014871 -0.218783 7e-07 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 4.93e-10 -0.200862 9e-14 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 1.99e-60 0.632455 9e-14 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 0.00014871 -0.218783 9e-14 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 4.93e-10 -0.200862 2e-16 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 1.99e-60 0.632455 2e-16 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 0.00014871 -0.218783 2e-16 breast cancer 2_201384985 rs2714486 ENSG00000064012.21 CASP8 151542 9.68e-21 -0.481454 7e-10 breast cancer 2_201384985 rs2714486 ENSG00000155749.12 FLACC1 27587 5.3e-10 0.241951 7e-10 breast cancer 2_201502866 rs77688320 ENSG00000064012.21 CASP8 269423 7.62e-18 -0.481249 3e-09 breast cancer 2_201502866 rs77688320 ENSG00000155749.12 FLACC1 145468 9.38e-08 0.225261 3e-09 breast cancer 2_201666541 rs62193398 ENSG00000234842.1 MTCO2P16 116910 1.92e-07 -0.353896 1e-07 breast cancer 2_217029040 rs12998806 ENSG00000115457.9 IGFBP2 396212 0.000111375 0.174802 2e-08 breast cancer 2_28896719 rs67073037 ENSG00000189350.12 TOGARAM2 -59892 0.000203614 -0.240076 3e-06 breast cancer 2_28896719 rs67073037 ENSG00000171103.10 TRMT61B 26418 3.12e-28 0.509721 3e-06 breast cancer 2_28896719 rs67073037 ENSG00000189350.12 TOGARAM2 -59892 0.000203614 -0.240076 5e-09 breast cancer 2_28896719 rs67073037 ENSG00000171103.10 TRMT61B 26418 3.12e-28 0.509721 5e-09 breast cancer 2_28897867 rs4577244 ENSG00000189350.12 TOGARAM2 -58744 0.000151096 -0.242318 2e-09 breast cancer 2_28897867 rs4577244 ENSG00000171103.10 TRMT61B 27566 8.34e-27 0.492619 2e-09 breast cancer 2_41931164 rs17029056 ENSG00000234362.5 LINC01914 -2559 6.09e-05 -0.122793 4e-06 breast cancer 2_69164996 rs4602255 ENSG00000169599.12 NFU1 -272632 0.000102945 0.0651098 2e-09 breast cancer 2_69207095 rs12474538 ENSG00000169599.12 NFU1 -230533 3.74e-08 -0.126615 9e-08 breast cancer 2_69900097 rs6716937 ENSG00000196975.15 ANXA4 255672 8.75e-06 -0.0816432 4e-07 breast cancer 2_69900097 rs6716937 ENSG00000087338.4 GMCL1 70455 4.8e-14 0.230094 4e-07 breast cancer 2_69900097 rs6716937 ENSG00000035141.7 FAM136A -401993 0.000188147 -0.0729532 4e-07 breast cancer 2_69945455 rs6756513 ENSG00000196975.15 ANXA4 301030 0.000233953 -0.0760926 4e-07 breast cancer 2_69945455 rs6756513 ENSG00000124380.10 SNRNP27 51895 0.000265189 -0.0904769 4e-07 breast cancer 20_39051206 rs742276 ENSG00000101452.14 DHX35 88907 0.000254903 -0.16144 9e-06 breast cancer 21_46360308 rs9808759 ENSG00000160284.14 SPATC1L 175832 7.45e-05 -0.404399 4e-07 breast cancer 21_46360308 rs9808759 ENSG00000182362.13 YBEY 73971 3.44e-16 -0.550994 4e-07 breast cancer 21_46360308 rs9808759 ENSG00000160284.14 SPATC1L 175832 7.45e-05 -0.404399 6e-09 breast cancer 21_46360308 rs9808759 ENSG00000182362.13 YBEY 73971 3.44e-16 -0.550994 6e-09 breast cancer 22_29273659 rs4820803 ENSG00000100263.13 RHBDD3 5681 6.4e-14 0.24116 2e-06 breast cancer 22_38172826 rs738321 ENSG00000198792.12 TMEM184B -100208 4e-10 -0.156275 7e-14 breast cancer 22_38172826 rs738321 ENSG00000184381.18 PLA2G6 -32864 1.39e-10 0.0906466 7e-14 breast cancer 22_38172826 rs738321 ENSG00000185022.11 MAFF -29056 4.19e-15 -0.139054 7e-14 breast cancer 22_38172826 rs738321 ENSG00000198792.12 TMEM184B -100208 4e-10 -0.156275 1e-13 breast cancer 22_38172826 rs738321 ENSG00000184381.18 PLA2G6 -32864 1.39e-10 0.0906466 1e-13 breast cancer 22_38172826 rs738321 ENSG00000185022.11 MAFF -29056 4.19e-15 -0.139054 1e-13 breast cancer 22_38174306 rs4820318 ENSG00000184381.18 PLA2G6 -31384 2.64e-09 0.0846423 1e-13 breast cancer 22_38174306 rs4820318 ENSG00000198792.12 TMEM184B -98728 1.3e-10 -0.1609 1e-13 breast cancer 22_38174306 rs4820318 ENSG00000185022.11 MAFF -27576 4.44e-15 -0.139375 1e-13 breast cancer 22_38798063 rs9619765 ENSG00000100211.10 CBY1 141423 7.92e-05 -0.343749 1e-06 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 1.8e-39 -0.581277 3e-17 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 1.8e-39 -0.581277 4e-06 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 1.8e-39 -0.581277 9e-14 breast cancer 22_40480230 rs6001930 ENSG00000100354.20 TNRC6B 435413 0.000160452 0.202288 2e-06 breast cancer 22_40480230 rs6001930 ENSG00000100354.20 TNRC6B 435413 0.000160452 0.202288 9e-19 breast cancer 22_40480230 rs6001930 ENSG00000100354.20 TNRC6B 435413 0.000160452 0.202288 2e-20 breast cancer 22_40480230 rs6001930 ENSG00000100354.20 TNRC6B 435413 0.000160452 0.202288 2e-06 breast cancer 22_40480230 rs6001930 ENSG00000100354.20 TNRC6B 435413 0.000160452 0.202288 4e-34 breast cancer 22_40480230 rs6001930 ENSG00000100354.20 TNRC6B 435413 0.000160452 0.202288 2e-11 breast cancer 22_40480230 rs6001930 ENSG00000100354.20 TNRC6B 435413 0.000160452 0.202288 5e-34 breast cancer 22_40480230 rs6001930 ENSG00000100354.20 TNRC6B 435413 0.000160452 0.202288 4e-14 breast cancer 22_40481631 rs6001932 ENSG00000100354.20 TNRC6B 436814 0.000118026 0.199781 7e-09 breast cancer 22_41323244 rs73176670 ENSG00000100197.20 CYP2D6 -807662 8.91e-05 0.419442 1e-08 breast cancer 22_41323244 rs73176670 ENSG00000183172.8 SMDT1 -756447 8.49e-05 0.316092 1e-08 breast cancer 22_41642782 rs73161324 ENSG00000198911.11 SREBF2 -224049 4.67e-05 0.155652 2e-09 breast cancer 22_42745087 rs4820477 ENSG00000128274.15 A4GALT 23789 9.08e-10 -0.163068 9e-07 breast cancer 3_100004736 rs9833888 ENSG00000206535.7 LNP1 -396663 9.57e-05 0.166023 5e-10 breast cancer 3_100004736 rs9833888 ENSG00000184220.11 CMSS1 186902 1.79e-10 0.134308 5e-10 breast cancer 3_100004736 rs9833888 ENSG00000168386.18 FILIP1L -109777 8.73e-21 -0.49488 5e-10 breast cancer 3_100004736 rs9833888 ENSG00000206535.7 LNP1 -396663 9.57e-05 0.166023 3e-10 breast cancer 3_100004736 rs9833888 ENSG00000184220.11 CMSS1 186902 1.79e-10 0.134308 3e-10 breast cancer 3_100004736 rs9833888 ENSG00000168386.18 FILIP1L -109777 8.73e-21 -0.49488 3e-10 breast cancer 3_100105841 rs9837602 ENSG00000168386.18 FILIP1L -8672 3.06e-20 -0.490791 1e-09 breast cancer 3_100105841 rs9837602 ENSG00000206535.7 LNP1 -295558 9.56e-05 0.166805 1e-09 breast cancer 3_100105841 rs9837602 ENSG00000184220.11 CMSS1 288007 2.51e-10 0.133894 1e-09 breast cancer 3_100149260 rs9289981 ENSG00000206535.7 LNP1 -252139 0.000140989 0.137945 4e-10 breast cancer 3_100149260 rs9289981 ENSG00000184220.11 CMSS1 331426 1.02e-15 0.141818 4e-10 breast cancer 3_100149260 rs9289981 ENSG00000168386.18 FILIP1L 34747 3.51e-26 -0.470066 4e-10 breast cancer 3_156645453 rs2136690 ENSG00000240875.5 LINC00886 -171609 1.23e-05 0.151456 4e-06 breast cancer 3_27123683 rs1522151 ENSG00000163491.16 NEK10 -245777 7.46e-05 0.160956 1e-09 breast cancer 3_27145111 rs1357245 ENSG00000163491.16 NEK10 -224349 1.81e-05 0.173246 2e-07 breast cancer 3_27145111 rs1357245 ENSG00000033867.16 SLC4A7 -339309 0.000216723 0.12437 2e-07 breast cancer 3_27285723 rs481519 ENSG00000163491.16 NEK10 -83737 3.35e-05 -0.172328 2e-09 breast cancer 3_27302153 rs653465 ENSG00000163491.16 NEK10 -67307 4.12e-05 -0.169211 5e-12 breast cancer 3_27312225 rs552647 ENSG00000033867.16 SLC4A7 -172195 0.000246669 -0.125853 3e-20 breast cancer 3_27312225 rs552647 ENSG00000163491.16 NEK10 -57235 1.8e-05 -0.176905 3e-20 breast cancer 3_27327393 rs3920005 ENSG00000163491.16 NEK10 -42067 1.08e-05 0.181893 8e-14 breast cancer 3_27347329 rs112238765 ENSG00000033867.16 SLC4A7 -137091 4.37e-05 0.142165 1e-18 breast cancer 3_27347329 rs112238765 ENSG00000163491.16 NEK10 -22131 2.16e-06 0.197906 1e-18 breast cancer 3_27359756 rs11715126 ENSG00000033867.16 SLC4A7 -124664 3.61e-05 0.143343 2e-12 breast cancer 3_27359756 rs11715126 ENSG00000163491.16 NEK10 -9704 1.99e-06 0.198117 2e-12 breast cancer 3_27374522 rs4973768 ENSG00000163491.16 NEK10 5062 2.12e-05 -0.168272 2e-08 breast cancer 3_27374522 rs4973768 ENSG00000163491.16 NEK10 5062 2.12e-05 -0.168272 2e-30 breast cancer 3_27374522 rs4973768 ENSG00000163491.16 NEK10 5062 2.12e-05 -0.168272 4e-23 breast cancer 3_27374522 rs4973768 ENSG00000163491.16 NEK10 5062 2.12e-05 -0.168272 5e-57 breast cancer 3_27374522 rs4973768 ENSG00000163491.16 NEK10 5062 2.12e-05 -0.168272 6e-07 breast cancer 3_27374522 rs4973768 ENSG00000163491.16 NEK10 5062 2.12e-05 -0.168272 5e-22 breast cancer 3_27374522 rs4973768 ENSG00000163491.16 NEK10 5062 2.12e-05 -0.168272 3e-30 breast cancer 3_27374522 rs4973768 ENSG00000163491.16 NEK10 5062 2.12e-05 -0.168272 5e-62 breast cancer 3_27468223 rs7619833 ENSG00000163491.16 NEK10 98763 0.000183938 -0.147726 3e-45 breast cancer 3_46825376 rs6796502 ENSG00000160801.13 PTH1R -52370 0.000389441 -0.129877 2e-08 breast cancer 3_46825376 rs6796502 ENSG00000160801.13 PTH1R -52370 0.000389441 -0.129877 6e-15 breast cancer 3_46825376 rs6796502 ENSG00000160801.13 PTH1R -52370 0.000389441 -0.129877 8e-07 breast cancer 3_46825376 rs6796502 ENSG00000160801.13 PTH1R -52370 0.000389441 -0.129877 7e-16 breast cancer 4_17386536 rs77485526 ENSG00000151552.11 QDPR -125698 4.01e-06 -0.299323 2e-06 breast cancer 4_38814717 rs6815814 ENSG00000174130.12 TLR6 -29074 5.12e-23 -0.398482 1e-11 breast cancer 4_38814717 rs6815814 ENSG00000197712.11 FAM114A1 -52960 7.25e-05 0.0836902 1e-11 breast cancer 4_38814717 rs6815814 ENSG00000174130.12 TLR6 -29074 5.12e-23 -0.398482 6e-13 breast cancer 4_38814717 rs6815814 ENSG00000197712.11 FAM114A1 -52960 7.25e-05 0.0836902 6e-13 breast cancer 4_57013626 rs4865169 ENSG00000084092.6 NOA1 34987 3.56e-05 0.0876506 7e-06 breast cancer 4_57013626 rs4865169 ENSG00000047315.15 POLR2B 34802 7.23e-07 -0.065863 7e-06 breast cancer 5_128098106 rs1112956 ENSG00000245937.7 SLC12A2-DT 14934 4.05e-55 0.668996 9e-06 breast cancer 5_128227188 rs36715 ENSG00000245937.7 SLC12A2-DT 144016 5.04e-21 0.393803 4e-06 breast cancer 5_132304843 rs6860806 ENSG00000072682.18 P4HA2 9528 3.84e-09 0.096659 8e-08 breast cancer 5_132304843 rs6860806 ENSG00000197375.12 SLC22A5 -64909 4.82e-65 -0.514017 8e-08 breast cancer 5_132304843 rs6860806 ENSG00000131435.12 PDLIM4 47172 1.86e-07 -0.0878655 8e-08 breast cancer 5_132304843 rs6860806 ENSG00000072682.18 P4HA2 9528 3.84e-09 0.096659 3e-08 breast cancer 5_132304843 rs6860806 ENSG00000197375.12 SLC22A5 -64909 4.82e-65 -0.514017 3e-08 breast cancer 5_132304843 rs6860806 ENSG00000131435.12 PDLIM4 47172 1.86e-07 -0.0878655 3e-08 breast cancer 5_132466255 rs2522057 ENSG00000197375.12 SLC22A5 96503 3.59e-33 0.394751 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000072682.18 P4HA2 170940 1.09e-08 -0.0944046 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000131435.12 PDLIM4 208584 2.09e-06 0.0806313 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000197208.5 SLC22A4 171812 1.49e-05 -0.133963 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000197375.12 SLC22A5 96503 3.59e-33 0.394751 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000072682.18 P4HA2 170940 1.09e-08 -0.0944046 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000131435.12 PDLIM4 208584 2.09e-06 0.0806313 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000197208.5 SLC22A4 171812 1.49e-05 -0.133963 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000197375.12 SLC22A5 96503 3.59e-33 0.394751 9e-08 breast cancer 5_132466255 rs2522057 ENSG00000072682.18 P4HA2 170940 1.09e-08 -0.0944046 9e-08 breast cancer 5_132466255 rs2522057 ENSG00000131435.12 PDLIM4 208584 2.09e-06 0.0806313 9e-08 breast cancer 5_132466255 rs2522057 ENSG00000197208.5 SLC22A4 171812 1.49e-05 -0.133963 9e-08 breast cancer 5_132497907 rs736801 ENSG00000197375.12 SLC22A5 128155 4.3e-25 -0.359199 8e-08 breast cancer 5_132497907 rs736801 ENSG00000072682.18 P4HA2 202592 2.36e-05 0.0727699 8e-08 breast cancer 5_132497907 rs736801 ENSG00000131435.12 PDLIM4 240236 0.000265744 -0.064378 8e-08 breast cancer 5_142290274 rs10051199 ENSG00000081791.8 DELE1 366466 0.000162722 -0.109517 2e-06 breast cancer 5_149053986 rs250677 ENSG00000169252.5 ADRB2 228741 3.96e-05 0.152291 8e-06 breast cancer 5_149053986 rs250677 ENSG00000169247.11 SH3TC2 -9177 2.12e-15 0.25934 8e-06 breast cancer 5_154976135 rs6890610 ENSG00000155506.16 LARP1 263233 3.19e-05 0.0573416 6e-06 breast cancer 5_43410515 rs73098691 ENSG00000112992.16 NNT -192177 0.000258572 -0.244906 3e-06 breast cancer 5_44145829 rs11749176 ENSG00000112992.16 NNT 543137 0.000310102 0.178972 9e-10 breast cancer 5_50345811 rs72749841 ENSG00000151883.17 PARP8 -320088 2.06e-06 -0.283931 7e-10 breast cancer 5_50793817 rs26067 ENSG00000170571.11 EMB 350569 8.8e-09 0.332157 2e-08 breast cancer 5_50793817 rs26067 ENSG00000151883.17 PARP8 127918 1.71e-19 0.400858 2e-08 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 8.01e-09 0.274171 7e-20 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 8.01e-09 0.274171 3e-27 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 8.01e-09 0.274171 1e-39 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 8.01e-09 0.274171 5e-09 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 8.01e-09 0.274171 3e-36 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 8.01e-09 0.274171 1e-08 breast cancer 5_56737113 rs1862626 ENSG00000155542.11 SETD9 -172147 7.77e-09 0.274595 4e-12 breast cancer 5_56977866 rs10036895 ENSG00000155542.11 SETD9 68606 5.91e-24 0.44436 2e-12 breast cancer 5_81972251 rs111549985 ENSG00000152348.15 ATG10 226 1.75e-71 0.754141 6e-12 breast cancer 5_81972251 rs111549985 ENSG00000186468.12 RPS23 -306326 5.13e-53 -0.368272 6e-12 breast cancer 5_81972251 rs111549985 ENSG00000205464.11 ATP6AP1L -307211 1.88e-68 0.522625 6e-12 breast cancer 5_82161539 rs2407064 ENSG00000205464.11 ATP6AP1L -117923 2.98e-68 -0.513639 3e-08 breast cancer 5_82161539 rs2407064 ENSG00000152348.15 ATG10 189514 1.93e-66 -0.7234 3e-08 breast cancer 5_82161539 rs2407064 ENSG00000186468.12 RPS23 -117038 2.56e-55 0.368223 3e-08 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 4.85e-70 -0.521637 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 9.08e-65 -0.721607 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 3.83e-58 0.377619 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 4.85e-70 -0.521637 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 9.08e-65 -0.721607 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 3.83e-58 0.377619 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 4.85e-70 -0.521637 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 9.08e-65 -0.721607 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 3.83e-58 0.377619 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 4.85e-70 -0.521637 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 9.08e-65 -0.721607 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 3.83e-58 0.377619 2e-12 breast cancer 5_82340549 rs2407156 ENSG00000205464.11 ATP6AP1L 61087 2.61e-57 0.474421 2e-06 breast cancer 5_82340549 rs2407156 ENSG00000186468.12 RPS23 61972 3.4e-49 -0.346176 2e-06 breast cancer 5_82340549 rs2407156 ENSG00000152348.15 ATG10 368524 6.96e-44 0.607583 2e-06 breast cancer 5_91367022 rs12110303 ENSG00000248323.5 LUCAT1 52691 0.000106542 0.140756 1e-11 breast cancer 5_91436408 rs10474352 ENSG00000248323.5 LUCAT1 122077 0.000363538 0.128782 1e-16 breast cancer 5_91436408 rs10474352 ENSG00000248323.5 LUCAT1 122077 0.000363538 0.128782 2e-09 breast cancer 5_91436408 rs10474352 ENSG00000248323.5 LUCAT1 122077 0.000363538 0.128782 5e-11 breast cancer 5_91493653 rs332529 ENSG00000248323.5 LUCAT1 179322 0.000205616 0.131324 9e-12 breast cancer 6_122394099 rs74392007 ENSG00000025156.12 HSF2 -5447 1.88e-09 -0.312771 3e-07 breast cancer 6_122554525 rs76092474 ENSG00000025156.12 HSF2 154979 7.46e-09 -0.294679 3e-06 breast cancer 6_127279485 rs2180341 ENSG00000093144.18 ECHDC1 -64124 1.58e-12 0.23285 3e-08 breast cancer 6_25710343 rs68006638 ENSG00000272462.2 LINC02980 -282319 3.42e-05 0.584311 2e-07 breast cancer 6_25710343 rs68006638 ENSG00000186470.13 BTN3A2 -654816 9.24e-33 -1.26443 2e-07 breast cancer 6_25710343 rs68006638 ENSG00000187837.3 H1-2 -346085 0.000165747 -0.252917 2e-07 breast cancer 6_25874195 rs13198474 ENSG00000187837.3 H1-2 -182233 0.000331684 -0.238143 2e-07 breast cancer 6_25874195 rs13198474 ENSG00000272462.2 LINC02980 -118467 3.32e-05 0.577761 2e-07 breast cancer 6_25874195 rs13198474 ENSG00000186470.13 BTN3A2 -490964 2.2e-33 -1.2587 2e-07 breast cancer 6_26175638 rs17598658 ENSG00000186470.13 BTN3A2 -189521 2.64e-40 -1.22894 2e-09 breast cancer 6_26175638 rs17598658 ENSG00000272462.2 LINC02980 182976 0.000322143 0.452042 2e-09 breast cancer 6_26463346 rs13195401 ENSG00000124613.8 ZNF391 -911269 7.94e-08 0.477543 2e-09 breast cancer 6_26463346 rs13195401 ENSG00000241549.8 GUSBP2 -493208 0.000176781 0.387799 2e-09 breast cancer 6_26463346 rs13195401 ENSG00000186470.13 BTN3A2 98187 3.5e-49 -1.26616 2e-09 breast cancer 6_26993501 rs34546498 ENSG00000186470.13 BTN3A2 628342 1.61e-43 -1.2457 9e-10 breast cancer 6_26993501 rs34546498 ENSG00000241549.8 GUSBP2 36947 0.000378618 0.380191 9e-10 breast cancer 6_26993501 rs34546498 ENSG00000124613.8 ZNF391 -381114 4.24e-07 0.465856 9e-10 breast cancer 6_27307055 rs56114371 ENSG00000124613.8 ZNF391 -67560 5.12e-08 0.494404 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000226314.7 ZKSCAN8P1 -854726 0.000159524 -0.344484 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000186470.13 BTN3A2 941896 2.82e-42 -1.21604 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000219891.2 ZSCAN12P1 -784099 0.000276905 -0.34513 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000269293.2 ZSCAN16-AS1 -829793 0.000160648 0.16274 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000197062.11 ZSCAN26 -959955 5.59e-09 -0.340089 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000219392.1 ZNF602P -808573 2.14e-08 -0.581422 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000197279.3 ZNF165 -774076 8.08e-05 -0.404134 2e-09 breast cancer 6_27457865 rs34196306 ENSG00000226314.7 ZKSCAN8P1 -703916 3.31e-05 -0.387984 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000269293.2 ZSCAN16-AS1 -678983 0.000734771 0.149672 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000241549.8 GUSBP2 501311 0.000242315 0.397802 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000219392.1 ZNF602P -657763 3.91e-09 -0.626095 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000187987.9 -985637 0.000443188 0.211775 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000124613.8 83250 1.63e-07 0.488529 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000197062.11 ZSCAN26 -809145 1.46e-09 -0.361657 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000197279.3 ZNF165 -623266 0.000152574 -0.398708 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000219891.2 ZSCAN12P1 -633289 0.000487001 -0.339983 1e-09 breast cancer 6_27873148 rs45509595 ENSG00000197279.3 ZNF165 -207983 3.05e-05 -0.433461 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000124613.8 ZNF391 498533 5.96e-07 0.461322 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000233822.4 H2BC15 35388 0.000334121 -0.290446 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000187987.9 ZSCAN23 -570354 0.00043655 0.209717 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000219392.1 ZNF602P -242480 1.73e-09 -0.632773 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000241549.8 GUSBP2 916594 0.000320431 0.38589 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000219891.2 ZSCAN12P1 -218006 0.000165767 -0.362698 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000269293.2 ZSCAN16-AS1 -263700 0.000425366 0.154426 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000197062.11 ZSCAN26 -393862 9.58e-09 -0.340091 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000226314.7 ZKSCAN8P1 -288633 9.24e-06 -0.409359 5e-09 breast cancer 6_28106103 rs34662244 ENSG00000124613.8 ZNF391 731488 2.2e-07 0.470652 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000269293.2 ZSCAN16-AS1 -30745 0.000542238 0.149208 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000197062.11 ZSCAN26 -160907 5.25e-09 -0.340325 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000233822.4 H2BC15 268343 0.000482858 -0.278185 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000197279.3 ZNF165 24972 1.68e-05 -0.439976 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000219392.1 ZNF602P -9525 6.94e-10 -0.637074 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000219891.2 ZSCAN12P1 14949 6.87e-05 -0.376887 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000187987.9 ZSCAN23 -337399 9.11e-05 0.229212 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000226314.7 ZKSCAN8P1 -55678 1.31e-05 -0.396113 3e-09 breast cancer 6_28364364 rs13214023 ENSG00000219392.1 ZNF602P 248736 7.73e-11 -0.675825 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000197062.11 ZSCAN26 97354 5.57e-10 -0.363514 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000197279.3 ZNF165 283233 3.65e-05 -0.425905 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000226314.7 ZKSCAN8P1 202583 2.54e-05 -0.386169 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000124613.8 ZNF391 989749 4.58e-08 0.499702 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000219891.2 ZSCAN12P1 273210 1.51e-05 -0.412371 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000187987.9 ZSCAN23 -79138 9.12e-05 0.231078 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000233822.4 H2BC15 526604 0.000359609 -0.286643 1e-09 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 1.38e-14 0.354977 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000176933.5 TOB2P1 739809 1.48e-05 -0.146571 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000226314.7 ZKSCAN8P1 796662 1.34e-07 0.243547 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 1.38e-14 0.354977 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000176933.5 TOB2P1 739809 1.48e-05 -0.146571 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000226314.7 ZKSCAN8P1 796662 1.34e-07 0.243547 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 1.38e-14 0.354977 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000176933.5 TOB2P1 739809 1.48e-05 -0.146571 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000226314.7 ZKSCAN8P1 796662 1.34e-07 0.243547 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 1.38e-14 0.354977 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000176933.5 TOB2P1 739809 1.48e-05 -0.146571 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000226314.7 ZKSCAN8P1 796662 1.34e-07 0.243547 5e-07 breast cancer 6_29280372 rs3130834 ENSG00000204622.11 HLA-J -725599 4.39e-06 -0.569 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000204644.9 ZFP57 -400738 4.9e-14 0.866484 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000204632.11 HLA-G -546595 3.16e-09 -0.735668 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000228078.1 HLA-U -653729 3.38e-05 0.565586 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000181126.13 HLA-V -510582 0.000132774 -0.497512 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000187987.9 ZSCAN23 836870 0.000156313 0.228161 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000230795.3 HLA-K -646806 2.9e-10 -0.757322 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000176998.4 HCG4 -512064 0.000315995 -0.419846 5e-09 breast cancer 6_29388554 rs9257809 ENSG00000230795.3 HLA-K -538624 7.3e-13 -0.806262 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000204622.11 HLA-J -617417 3.87e-07 -0.590806 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000228078.1 HLA-U -545547 8.28e-06 0.571915 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000187987.9 ZSCAN23 945052 0.000232403 0.209362 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000204632.11 HLA-G -438413 2.22e-09 -0.699594 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000235821.1 IFITM4P -362594 0.00016664 -0.402621 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000176998.4 HCG4 -403882 9.58e-06 -0.484148 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000204644.9 ZFP57 -292556 1.91e-16 0.885685 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000239257.1 RPL23AP1 -338328 0.000482143 0.332728 3e-08 breast cancer 6_29509637 rs1233480 ENSG00000204644.9 ZFP57 -171473 9.79e-11 0.619141 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000176998.4 HCG4 -282799 3.29e-05 -0.398149 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000230795.3 HLA-K -417541 8.72e-09 -0.572367 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000235821.1 IFITM4P -241511 1.76e-05 -0.400916 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000204632.11 HLA-G -317330 2.23e-05 -0.438847 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000239257.1 RPL23AP1 -217245 0.000429553 0.29381 5e-08 breast cancer 6_29693039 rs3116813 ENSG00000230795.3 HLA-K -234139 1.29e-16 -0.885689 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000146112.11 PPP1R18 -994856 1.23e-08 -0.215125 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000234127.8 TRIM26 -520388 8.6e-05 0.138359 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000231130.1 HLA-T -203615 0.000365818 -0.409079 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000239257.1 RPL23AP1 -33843 0.000143179 0.348215 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000176998.4 HCG4 -99397 7.26e-06 -0.471847 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204622.11 HLA-J -312932 1.26e-08 -0.634792 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000228078.1 HLA-U -241062 2.48e-07 0.634146 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204632.11 HLA-G -133928 3.88e-10 -0.702774 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000235821.1 IFITM4P -58109 2.69e-05 -0.430959 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204644.9 ZFP57 11929 6.03e-20 0.938032 6e-07 breast cancer 6_29785031 rs147680653 ENSG00000228078.1 HLA-U -149070 1.2e-07 0.646733 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000231130.1 HLA-T -111623 0.000217394 -0.422094 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204622.11 HLA-J -220940 8.54e-09 -0.638636 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000239257.1 RPL23AP1 58149 0.000157583 0.344316 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000235821.1 IFITM4P 33883 1.6e-05 -0.440443 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000181126.13 HLA-V -5923 0.000592887 -0.403906 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204632.11 HLA-G -41936 2.48e-10 -0.706642 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204644.9 ZFP57 103921 1.62e-20 0.946214 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000234127.8 TRIM26 -428396 0.000113223 0.135363 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000146112.11 PPP1R18 -902864 9.01e-09 -0.215922 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000176998.4 HCG4 -7405 4.8e-06 -0.478352 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000230795.3 HLA-K -142147 8.51e-17 -0.885982 1e-06 breast cancer 6_29882943 rs1611579 ENSG00000214894.6 LINC00243 -947716 0.000408388 0.378765 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204632.11 HLA-G 55976 8.62e-12 -0.745351 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000176998.4 HCG4 90507 6.94e-06 -0.461708 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000228078.1 HLA-U -51158 1.64e-07 0.628222 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204622.11 HLA-J -123028 3.95e-09 -0.640248 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000234127.8 TRIM26 -330484 4.54e-05 0.140212 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000235821.1 IFITM4P 131795 5.64e-06 -0.454263 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000146112.11 PPP1R18 -804952 9.7e-09 -0.21148 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000230795.3 HLA-K -44235 3.12e-17 -0.880879 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000239257.1 RPL23AP1 156061 3.83e-05 0.367646 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000228022.5 HCG20 -883882 0.000142878 -0.412804 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204644.9 ZFP57 201833 4.05e-20 0.919869 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000231130.1 HLA-T -13711 2.67e-05 -0.469361 8e-07 breast cancer 6_30003183 rs3094146 ENSG00000231130.1 HLA-T 106529 3.38e-05 -0.468522 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000214894.6 LINC00243 -827476 0.000440624 0.380696 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000234127.8 TRIM26 -210244 3.09e-05 0.144719 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000197935.6 ZNF311 997923 0.000603296 -0.243984 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000204622.11 HLA-J -2788 4.16e-09 -0.646225 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000230795.3 HLA-K 76005 2.95e-17 -0.890989 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000204644.9 ZFP57 322073 1.09e-19 0.919967 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000239257.1 RPL23AP1 276301 7.35e-05 0.358068 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000228022.5 HCG20 -763642 4.59e-05 -0.446541 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000235821.1 IFITM4P 252035 1.8e-05 -0.434376 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000228078.1 HLA-U 69082 1.52e-07 0.636618 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000176998.4 HCG4 210747 5.56e-06 -0.471444 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000146112.11 PPP1R18 -684712 1.29e-09 -0.225611 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000204632.11 HLA-G 176216 1.19e-12 -0.782279 7e-07 breast cancer 6_30107326 rs2523992 ENSG00000146112.11 PPP1R18 -580569 8.32e-06 -0.143033 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000228078.1 HLA-U 173225 7.86e-05 0.412051 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000204632.11 HLA-G 280359 5.2e-05 -0.388478 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000231130.1 HLA-T 210672 6.91e-05 -0.384532 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000230795.3 HLA-K 180148 8.92e-13 -0.651745 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000176998.4 HCG4 314890 3.03e-07 -0.452658 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000235821.1 IFITM4P 356178 0.000575608 -0.299119 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000204623.9 ZNRD1ASP 46073 2.54e-06 -0.207326 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000204644.9 ZFP57 426216 1.87e-08 0.501723 2e-07 breast cancer 6_30365728 rs3094054 ENSG00000204592.8 HLA-E -123739 0.000352321 0.109856 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204540.10 PSORS1C1 -749022 1.67e-05 -0.342747 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204622.11 HLA-J 359757 6.3e-06 -0.506918 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000234127.8 TRIM26 152301 0.000295979 0.12757 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000231130.1 HLA-T 469074 5.05e-05 -0.463836 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000214894.6 LINC00243 -464931 8.3e-05 0.430728 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204525.16 HLA-C -906377 1.05e-10 0.669164 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000146112.11 PPP1R18 -322167 1.29e-11 -0.253422 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000228078.1 HLA-U 431627 3.15e-07 0.628295 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000176998.4 HCG4 573292 0.000106683 -0.408477 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204644.9 ZFP57 684618 7.75e-15 0.807537 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204632.11 HLA-G 538761 1.15e-11 -0.758223 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000230795.3 HLA-K 438550 8.62e-15 -0.833729 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000228022.5 HCG20 -401097 1.04e-05 -0.488245 1e-07 breast cancer 6_30374976 rs115707823 ENSG00000204525.16 HLA-C -897129 3.77e-05 0.355157 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000204644.9 ZFP57 693866 3.07e-09 0.512565 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000230795.3 HLA-K 447798 1.15e-08 -0.511057 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000228022.5 HCG20 -391849 4.05e-05 -0.373142 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000214894.6 LINC00243 -455683 0.000164904 0.338264 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000228078.1 HLA-U 440875 8.36e-05 0.398679 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000214922.9 HLA-F-AS1 625983 0.000258841 0.211624 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000146112.11 PPP1R18 -312919 5.72e-09 -0.180011 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000204525.16 HLA-C -897129 3.77e-05 0.355157 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000204644.9 ZFP57 693866 3.07e-09 0.512565 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000230795.3 HLA-K 447798 1.15e-08 -0.511057 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000228022.5 HCG20 -391849 4.05e-05 -0.373142 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000214894.6 LINC00243 -455683 0.000164904 0.338264 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000228078.1 HLA-U 440875 8.36e-05 0.398679 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000214922.9 HLA-F-AS1 625983 0.000258841 0.211624 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000146112.11 PPP1R18 -312919 5.72e-09 -0.180011 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000228022.5 HCG20 -293299 1.54e-05 -0.46453 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000146112.11 PPP1R18 -214369 5.07e-12 -0.250429 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204540.10 PSORS1C1 -641224 2.1e-05 -0.328714 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000228078.1 HLA-U 539425 1.31e-06 0.577592 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000230795.3 HLA-K 546348 1e-13 -0.777913 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000176998.4 HCG4 681090 0.000215446 -0.378696 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204632.11 HLA-G 646559 1.06e-09 -0.664711 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204644.9 ZFP57 792416 5.74e-13 0.730068 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204622.11 HLA-J 467555 4.22e-06 -0.500668 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000214894.6 LINC00243 -357133 0.000252639 0.389038 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204525.16 HLA-C -798579 2.18e-08 0.565952 2e-06 breast cancer 6_30576624 rs3132610 ENSG00000204540.10 PSORS1C1 -538126 2.53e-06 -0.36522 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204516.9 MICB -918257 6.18e-07 0.372388 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204525.16 HLA-C -695481 2e-09 0.608943 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204632.11 HLA-G 749657 2.6e-12 -0.762431 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000214894.6 LINC00243 -254035 4.4e-05 0.43648 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000228022.5 HCG20 -190201 3.48e-06 -0.501266 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000137411.16 VARS2 -337581 5.65e-05 -0.248096 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204644.9 ZFP57 895514 8.32e-13 0.730294 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000231130.1 HLA-T 679970 0.000551776 -0.387193 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000146112.11 PPP1R18 -111271 2.49e-12 -0.255631 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000176998.4 HCG4 784188 0.000137443 -0.39273 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000228078.1 HLA-U 642523 5.37e-07 0.601894 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000230795.3 HLA-K 649446 7.14e-13 -0.757278 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204622.11 HLA-J 570653 4.09e-06 -0.50485 1e-06 breast cancer 6_30682249 rs9262142 ENSG00000230795.3 HLA-K 755071 2.56e-12 -0.742806 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000228022.5 HCG20 -84576 9.13e-07 -0.531749 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204516.9 MICB -812632 4.3e-07 0.379004 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000228078.1 HLA-U 748148 3.8e-06 0.558561 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000176998.4 HCG4 889813 9.15e-05 -0.404466 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204540.10 PSORS1C1 -432501 2.41e-06 -0.367481 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000146112.11 PPP1R18 -5646 9.48e-14 -0.271928 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000137411.16 VARS2 -231956 6.4e-05 -0.247341 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000231130.1 HLA-T 785595 0.000415191 -0.397226 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204622.11 HLA-J 676278 4.41e-06 -0.50529 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000240053.8 LY6G5B -987918 2.12e-07 0.288422 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000214894.6 LINC00243 -148410 1.46e-05 0.464461 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204632.11 HLA-G 855282 9.45e-12 -0.746713 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204525.16 HLA-C -589856 1.04e-09 0.621838 3e-06 breast cancer 6_30793795 rs3129984 ENSG00000137310.11 TCF19 -364747 0.000180472 0.0989514 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000146112.11 PPP1R18 105900 7.16e-13 -0.251185 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204540.10 PSORS1C1 -320955 3.61e-08 -0.408616 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000231130.1 HLA-T 897141 0.000423986 -0.379328 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000230795.3 HLA-K 866617 3.53e-10 -0.64035 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204525.16 HLA-C -478310 1.71e-11 0.652485 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000214894.6 LINC00243 -36864 9.13e-06 0.454404 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000240053.8 LY6G5B -876372 3.67e-07 0.270565 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204632.11 HLA-G 966828 2.63e-12 -0.732105 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000228022.5 HCG20 26970 4.06e-08 -0.566461 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204622.11 HLA-J 787824 3.37e-05 -0.437539 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204516.9 MICB -701086 2.83e-07 0.368 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000137411.16 VARS2 -120410 2.37e-05 -0.249842 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000228078.1 HLA-U 859694 1.74e-05 0.497371 8e-06 breast cancer 6_31347004 rs115392158 ENSG00000146112.11 PPP1R18 659109 9.89e-05 -0.1016 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000224389.8 C4B -667758 6.14e-09 0.238075 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000204592.8 HLA-E 857537 0.000215593 0.0778066 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000214894.6 LINC00243 516345 0.000285697 0.272137 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000137310.11 TCF19 188462 0.000113521 0.0743617 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000244731.7 C4A -635020 4.8e-12 -0.287295 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000213760.10 ATP6V1G2 -199844 2.08e-06 -0.197308 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000204540.10 PSORS1C1 232254 3.3e-06 -0.253016 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000204520.12 MICA -52780 1.24e-05 0.310735 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000146112.11 PPP1R18 659109 9.89e-05 -0.1016 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000224389.8 C4B -667758 6.14e-09 0.238075 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000204592.8 HLA-E 857537 0.000215593 0.0778066 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000214894.6 LINC00243 516345 0.000285697 0.272137 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000137310.11 TCF19 188462 0.000113521 0.0743617 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000244731.7 C4A -635020 4.8e-12 -0.287295 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000213760.10 ATP6V1G2 -199844 2.08e-06 -0.197308 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000204540.10 PSORS1C1 232254 3.3e-06 -0.253016 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000204520.12 MICA -52780 1.24e-05 0.310735 9e-06 breast cancer 6_32699696 rs147527678 ENSG00000242574.8 HLA-DMB -241374 1.32e-07 0.471787 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000204351.11 SKIV2L 740585 4.77e-05 -0.143304 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000244731.7 C4A 717672 9.14e-15 -0.354795 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000224389.8 C4B 684934 6.94e-10 0.279496 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000204338.8 CYP21A1P 694007 8.25e-05 -0.244341 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000204257.14 HLA-DMA -269398 6.28e-10 0.370788 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000231852.6 CYP21A2 661431 2.41e-05 0.296786 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000242574.8 HLA-DMB -241374 1.32e-07 0.471787 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000204351.11 SKIV2L 740585 4.77e-05 -0.143304 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000244731.7 C4A 717672 9.14e-15 -0.354795 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000224389.8 C4B 684934 6.94e-10 0.279496 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000204338.8 CYP21A1P 694007 8.25e-05 -0.244341 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000204257.14 HLA-DMA -269398 6.28e-10 0.370788 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000231852.6 CYP21A2 661431 2.41e-05 0.296786 6e-08 breast cancer 6_33272092 rs17215231 ENSG00000231500.6 RPS18 44 1.09e-24 -0.253763 9e-13 breast cancer 6_43259403 rs111342015 ENSG00000112667.12 DNPH1 29919 3.9e-44 -0.612416 9e-08 breast cancer 7_100437651 rs117911427 ENSG00000085514.15 PILRA 64206 3.05e-09 0.635719 7e-06 breast cancer 7_100437651 rs117911427 ENSG00000121716.20 PILRB 85475 2.62e-10 0.575277 7e-06 breast cancer 7_100437651 rs117911427 ENSG00000078319.9 PMS2P1 95743 0.000162442 -0.261834 7e-06 breast cancer 7_100437651 rs117911427 ENSG00000242294.6 STAG3L5P 101239 1.4e-08 0.568376 7e-06 breast cancer 7_100437651 rs117911427 ENSG00000106290.14 TAF6 318084 6.54e-05 -0.226264 7e-06 breast cancer 7_102160260 rs411624 ENSG00000267368.1 UPK3BL1 -482531 0.000247595 0.533626 2e-06 breast cancer 7_102478605 rs369574511 ENSG00000170667.14 RASA4B -39176 2.14e-05 -0.198124 2e-07 breast cancer 7_102478605 rs369574511 ENSG00000160991.15 ORAI2 45499 2.23e-05 0.122676 2e-07 breast cancer 7_102478605 rs369574511 ENSG00000161036.12 LRWD1 13676 7.97e-14 -0.127609 2e-07 breast cancer 7_103022031 rs7458786 ENSG00000161036.12 LRWD1 557102 0.000215126 0.0822856 9e-06 breast cancer 7_103251337 rs6946892 ENSG00000128606.12 LRRC17 338346 3.76e-06 -0.149925 1e-07 breast cancer 7_103251337 rs6946892 ENSG00000161040.16 FBXL13 176494 0.000122033 -0.237425 1e-07 breast cancer 7_130989722 rs68056147 ENSG00000231721.6 LINC-PINT -120373 2.79e-06 0.155883 5e-13 breast cancer 7_144351809 rs62485509 ENSG00000244198.5 ARHGEF35-AS1 156951 2.98e-06 -0.379298 4e-12 breast cancer 7_144351809 rs62485509 ENSG00000170356.8 OR2A20P 98852 1.38e-08 0.452167 4e-12 breast cancer 7_144351809 rs62485509 ENSG00000204959.4 ARHGEF34P 64843 3.05e-13 -0.518442 4e-12 breast cancer 7_144377836 rs720475 ENSG00000244198.5 ARHGEF35-AS1 182978 6.02e-05 -0.284279 4e-10 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 1.54e-08 0.392027 4e-10 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 1.43e-12 -0.438655 4e-10 breast cancer 7_144377836 rs720475 ENSG00000244198.5 ARHGEF35-AS1 182978 6.02e-05 -0.284279 7e-12 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 1.54e-08 0.392027 7e-12 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 1.43e-12 -0.438655 7e-12 breast cancer 7_144377836 rs720475 ENSG00000244198.5 ARHGEF35-AS1 182978 6.02e-05 -0.284279 7e-11 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 1.54e-08 0.392027 7e-11 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 1.43e-12 -0.438655 7e-11 breast cancer 7_144377836 rs720475 ENSG00000244198.5 ARHGEF35-AS1 182978 6.02e-05 -0.284279 1e-08 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 1.54e-08 0.392027 1e-08 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 1.43e-12 -0.438655 1e-08 breast cancer 7_144377836 rs720475 ENSG00000244198.5 ARHGEF35-AS1 182978 6.02e-05 -0.284279 1e-11 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 1.54e-08 0.392027 1e-11 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 1.43e-12 -0.438655 1e-11 breast cancer 7_144377836 rs720475 ENSG00000244198.5 ARHGEF35-AS1 182978 6.02e-05 -0.284279 2e-11 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 1.54e-08 0.392027 2e-11 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 1.43e-12 -0.438655 2e-11 breast cancer 7_144477198 rs13230714 ENSG00000204959.4 ARHGEF34P 190232 1.08e-07 -0.318783 1e-06 breast cancer 7_28317270 rs17156577 ENSG00000153814.11 JAZF1 136527 0.0001583 0.130864 4e-09 breast cancer 7_28317270 rs17156577 ENSG00000146592.16 CREB5 17949 1.67e-11 0.371975 4e-09 breast cancer 7_28317270 rs17156577 ENSG00000153814.11 JAZF1 136527 0.0001583 0.130864 2e-08 breast cancer 7_28317270 rs17156577 ENSG00000146592.16 CREB5 17949 1.67e-11 0.371975 2e-08 breast cancer 7_28828469 rs77702473 ENSG00000146592.16 CREB5 529148 3.52e-05 0.270618 2e-06 breast cancer 7_67594280 rs10263639 ENSG00000106610.14 STAG3L4 288293 0.000266167 -0.191152 3e-06 breast cancer 7_74696373 rs74910854 ENSG00000184616.8 SPDYE12 -216883 1.54e-06 0.496449 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000196275.13 GTF2IRD2 -155178 1.17e-16 0.413765 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000277053.4 GTF2IP1 -541323 2.19e-25 -0.912772 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000263001.5 GTF2I 38706 3.51e-11 0.293245 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000123965.13 PMS2P5 -197743 7.19e-10 0.695989 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000277072.4 STAG3L2 -194237 1.27e-08 0.409253 5e-06 breast cancer 7_94484487 rs17268829 ENSG00000242265.5 PEG10 -171838 4.99e-05 -0.114837 4e-15 breast cancer 7_94484487 rs17268829 ENSG00000242265.5 PEG10 -171838 4.99e-05 -0.114837 5e-13 breast cancer 8_103189173 rs12548629 ENSG00000164930.11 FZD6 -109658 1.1e-06 -0.146585 3e-07 breast cancer 8_103189173 rs12548629 ENSG00000164933.11 SLC25A32 -218611 8.86e-08 0.134977 3e-07 breast cancer 8_17926905 rs11779988 ENSG00000078674.17 PCM1 4065 8.21e-18 -0.18812 2e-06 breast cancer 8_220692 rs66823261 ENSG00000172748.13 ZNF596 -11540 4.67e-16 -0.390102 6e-09 breast cancer 8_220692 rs66823261 ENSG00000172748.13 ZNF596 -11540 4.67e-16 -0.390102 3e-07 breast cancer 8_220692 rs66823261 ENSG00000172748.13 ZNF596 -11540 4.67e-16 -0.390102 3e-08 breast cancer 8_220692 rs66823261 ENSG00000172748.13 ZNF596 -11540 4.67e-16 -0.390102 1e-08 breast cancer 8_22634616 rs6558174 ENSG00000241852.9 C8orf58 35015 1.28e-12 0.346044 3e-06 breast cancer 8_29652100 rs9693444 ENSG00000120875.8 DUSP4 301432 9.45e-06 -0.226316 9e-14 breast cancer 8_29652100 rs9693444 ENSG00000120875.8 DUSP4 301432 9.45e-06 -0.226316 1e-12 breast cancer 8_29652100 rs9693444 ENSG00000120875.8 DUSP4 301432 9.45e-06 -0.226316 8e-26 breast cancer 8_29652100 rs9693444 ENSG00000120875.8 DUSP4 301432 9.45e-06 -0.226316 1e-10 breast cancer 8_29652100 rs9693444 ENSG00000120875.8 DUSP4 301432 9.45e-06 -0.226316 2e-21 breast cancer 8_61692700 rs2350923 ENSG00000254285.3 KRT8P3 114480 1.97e-08 -0.360357 8e-07 breast cancer 9_104094512 rs4742903 ENSG00000136824.18 SMC2 252 2.65e-08 0.0925345 3e-08 breast cancer 9_104094512 rs4742903 ENSG00000136824.18 SMC2 252 2.65e-08 0.0925345 2e-07 breast cancer 9_133463535 rs3124765 ENSG00000148300.11 REXO4 45439 3.67e-06 0.168102 2e-06 breast cancer 9_133463535 rs3124765 ENSG00000148290.9 SURF1 106859 7.06e-10 0.341336 2e-06 breast cancer 9_34723038 rs10814138 ENSG00000205108.5 FAM205A -6429 7.73e-07 -0.239515 3e-06 breast cancer 9_5956008 rs10975370 ENSG00000099219.13 ERMP1 122891 9.62e-06 -0.165149 3e-06 breast cancer 9_95606163 rs2405064 ENSG00000185920.15 PTCH1 89106 0.000130678 0.191416 4e-06