DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
breast cancer	1_10535965	rs2506889	ENSG00000175279.21	CENPS	105182	2.3e-05	0.214376	2e-20
breast cancer	1_10536284	rs12375	ENSG00000175279.21	CENPS	105501	2.3e-05	0.214376	1e-05
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	1.2e-08	0.225317	1e-06
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	1.2e-08	0.225317	1e-06
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	1.2e-08	0.225317	3e-08
breast cancer	1_121121848	rs369304377	ENSG00000171943.11	SRGAP2C	-62962	7.83e-07	-0.23661	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000223345.3	H2BP1	4591	6.38e-15	0.503962	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000270392.2	PFN1P2	687796	2.31e-06	0.27434	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000273136.6	NBPF26	397925	7.98e-11	0.461214	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000226067.6	LINC00623	169409	1.21e-05	-0.264731	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000270231.3	NBPF8	685495	1.73e-13	0.327165	2e-29
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	0.000225237	-0.218916	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.68e-09	0.41447	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	4.96e-07	-0.234978	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	5.81e-11	0.419307	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	0.000225237	-0.218916	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.68e-09	0.41447	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	4.96e-07	-0.234978	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	5.81e-11	0.419307	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	0.000225237	-0.218916	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.68e-09	0.41447	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	4.96e-07	-0.234978	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	5.81e-11	0.419307	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	0.000225237	-0.218916	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.68e-09	0.41447	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	4.96e-07	-0.234978	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	5.81e-11	0.419307	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	0.000225237	-0.218916	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.68e-09	0.41447	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	4.96e-07	-0.234978	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	5.81e-11	0.419307	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	0.000225237	-0.218916	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.68e-09	0.41447	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	4.96e-07	-0.234978	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	5.81e-11	0.419307	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	0.000225237	-0.218916	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.68e-09	0.41447	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	4.96e-07	-0.234978	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	5.81e-11	0.419307	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	0.000225237	-0.218916	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.68e-09	0.41447	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	4.96e-07	-0.234978	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	5.81e-11	0.419307	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	0.000225237	-0.218916	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.68e-09	0.41447	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	4.96e-07	-0.234978	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	5.81e-11	0.419307	8e-54
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.7e-14	0.373639	2e-07
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.7e-14	0.373639	5e-09
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.7e-14	0.373639	8e-09
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.7e-14	0.373639	6e-10
breast cancer	1_155176305	rs4971059	ENSG00000160766.14	GBAP1	-51117	1.76e-08	-0.224123	5e-11
breast cancer	1_155176305	rs4971059	ENSG00000160766.14	GBAP1	-51117	1.76e-08	-0.224123	2e-10
breast cancer	1_155212052	rs2974935	ENSG00000160766.14	GBAP1	-15370	2.05e-26	-0.357233	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000177628.15	GBA	-32647	2.82e-05	-0.119324	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000169242.11	EFNA1	84592	4.86e-05	-0.11764	2e-07
breast cancer	1_155212373	rs2075570	ENSG00000160766.14	GBAP1	-15049	6.21e-27	-0.35855	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000177628.15	GBA	-32326	1.85e-05	-0.12136	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000169242.11	EFNA1	84913	9.71e-05	-0.112457	5e-06
breast cancer	1_155216951	rs1057941	ENSG00000160766.14	GBAP1	-10471	1.99e-13	-0.266187	2e-07
breast cancer	1_155302483	rs7524950	ENSG00000143622.10	RIT1	-608921	1.36e-06	-0.249995	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000225855.6	RUSC1-AS1	-19204	1.23e-06	0.222605	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000143537.13	ADAM15	251917	3.58e-06	-0.143725	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000160766.14	GBAP1	75061	1.28e-06	-0.209166	3e-09
breast cancer	1_155446537	rs10796944	ENSG00000160766.14	GBAP1	219115	7.94e-05	-0.184992	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000203761.5	MSTO2P	-299292	4.18e-05	-0.197559	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000225855.6	RUSC1-AS1	124850	4.8e-05	0.202343	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000143622.10	RIT1	-464867	2.45e-05	-0.236564	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000143537.13	ADAM15	395971	2.12e-05	-0.142591	7e-10
breast cancer	1_155587180	rs12091730	ENSG00000225855.6	RUSC1-AS1	265493	4.99e-05	0.202594	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000143537.13	ADAM15	536614	3.32e-05	-0.139773	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000203761.5	MSTO2P	-158649	2.49e-05	-0.203794	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000143622.10	RIT1	-324224	8.59e-06	-0.249948	2e-10
breast cancer	1_155697170	rs348196	ENSG00000143537.13	ADAM15	646604	1.94e-05	-0.133199	2e-08
breast cancer	1_155697170	rs348196	ENSG00000203761.5	MSTO2P	-48659	1.86e-05	-0.191701	2e-08
breast cancer	1_155697170	rs348196	ENSG00000143622.10	RIT1	-214234	5.8e-07	-0.259007	2e-08
breast cancer	1_155697170	rs348196	ENSG00000225855.6	RUSC1-AS1	375483	7.24e-06	0.207027	2e-08
breast cancer	1_155697170	rs348196	ENSG00000160766.14	GBAP1	469748	2.45e-05	-0.183564	2e-08
breast cancer	1_156183252	rs11264454	ENSG00000196189.12	SEMA4A	35886	3.71e-05	0.191071	2e-08
breast cancer	1_156183252	rs11264454	ENSG00000196189.12	SEMA4A	35886	3.71e-05	0.191071	7e-07
breast cancer	1_16013277	rs1763604	ENSG00000186510.11	CLCNKA	-5598	1.85e-10	-0.356346	7e-09
breast cancer	1_16013277	rs1763604	ENSG00000173641.17	HSPB7	-6317	1.59e-06	0.134021	7e-09
breast cancer	1_168127440	rs60504827	ENSG00000143158.10	MPC2	190400	5.67e-08	-0.16031	2e-07
breast cancer	1_207903511	rs2724379	ENSG00000284237.1	LINC02767	-55781	7.3e-23	-0.483981	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000086015.20	MAST2	131482	6.53e-05	-0.185555	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000159588.14	CCDC17	294412	2.36e-05	-0.206513	2e-07
breast cancer	1_46135245	rs1707302	ENSG00000159588.14	CCDC17	511188	0.000190133	0.178162	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000086015.20	MAST2	348258	1.7e-05	0.194312	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000159588.14	CCDC17	511188	0.000190133	0.178162	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000086015.20	MAST2	348258	1.7e-05	0.194312	3e-08
breast cancer	1_8035440	rs225132	ENSG00000116288.12	PARK7	81149	1.55e-10	0.162644	3e-06
breast cancer	1_8326670	rs9628987; rs7535752	ENSG00000162426.14	SLC45A1	8844	1.61e-11	0.462301	5e-06
breast cancer	1_91555907	rs12134245	ENSG00000097046.12	CDC7	55014	5.22e-06	-0.173749	4e-06
breast cancer	10_121865675	rs10510102	ENSG00000226864.2	ATE1-AS1	-62637	4.05e-05	0.366958	2e-06
breast cancer	10_121904429	rs7899628	ENSG00000226864.2	ATE1-AS1	-23883	1e-12	-0.458643	9e-10
breast cancer	10_27080233	rs7918232	ENSG00000120539.14	MASTL	-75034	2.45e-15	0.51248	8e-06
breast cancer	10_5752689	rs55910451	ENSG00000057608.16	GDI2	-89443	5.91e-10	-0.199721	4e-07
breast cancer	10_92172529	rs72807246	ENSG00000228701.1	TNKS2-DT	374238	3.83e-10	0.644945	3e-06
breast cancer	11_111636465	rs505372	ENSG00000137720.7	C11orf1	-242470	4.41e-06	0.15147	3e-06
breast cancer	11_111765903	rs643506	ENSG00000137713.15	PPP2R1B	-524	7.89e-07	-0.224583	2e-07
breast cancer	11_117214494	rs77683187	ENSG00000149577.15	SIDT2	35761	2.13e-05	0.292642	2e-06
breast cancer	11_120362917	rs7924772	ENSG00000181264.8	TLCD5	37788	1.42e-14	0.320697	4e-08
breast cancer	11_18642694	rs10832963	ENSG00000179119.14	SPTY2D1	7903	4.3e-09	-0.194041	9e-06
breast cancer	11_1871355	rs4980389	ENSG00000226416.1	MRPL23-AS1	-118565	5.7e-06	0.306099	4e-07
breast cancer	11_1871355	rs4980389	ENSG00000130595.17	TNNT3	-48207	3.32e-06	-0.21006	4e-07
breast cancer	11_1874478	rs4980386	ENSG00000226416.1	MRPL23-AS1	-115442	1.61e-06	0.321218	9e-17
breast cancer	11_1874478	rs4980386	ENSG00000130595.17	TNNT3	-45084	3.91e-06	-0.207459	9e-17
breast cancer	11_1877434	rs1973765	ENSG00000226416.1	MRPL23-AS1	-112486	9.11e-07	0.326451	1e-37
breast cancer	11_1877434	rs1973765	ENSG00000130595.17	TNNT3	-42128	2.25e-06	-0.211039	1e-37
breast cancer	11_1880867	rs4980383	ENSG00000130595.17	TNNT3	-38695	1.38e-05	0.195416	3e-06
breast cancer	11_1880867	rs4980383	ENSG00000130595.17	TNNT3	-38695	1.38e-05	0.195416	9e-09
breast cancer	11_1892909	rs576603	ENSG00000226416.1	MRPL23-AS1	-97011	6.16e-08	0.349937	2e-08
breast cancer	11_1892909	rs576603	ENSG00000130595.17	TNNT3	-26653	7.65e-09	-0.249396	2e-08
breast cancer	11_1920716	rs909116	ENSG00000130595.17	TNNT3	1154	1.5e-06	-0.209682	7e-07
breast cancer	11_65815595	rs3903072	ENSG00000254855.1	KLC2-AS1	-450059	2.02e-06	0.261068	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	2.32e-12	-0.498675	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1.53e-07	0.253875	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	0.000197493	0.0961	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172500.12	FIBP	-72944	3.93e-05	-0.111088	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000254855.1	KLC2-AS1	-450059	2.02e-06	0.261068	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	2.32e-12	-0.498675	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1.53e-07	0.253875	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	0.000197493	0.0961	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172500.12	FIBP	-72944	3.93e-05	-0.111088	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000254855.1	KLC2-AS1	-450059	2.02e-06	0.261068	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	2.32e-12	-0.498675	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1.53e-07	0.253875	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	0.000197493	0.0961	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172500.12	FIBP	-72944	3.93e-05	-0.111088	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000254855.1	KLC2-AS1	-450059	2.02e-06	0.261068	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	2.32e-12	-0.498675	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1.53e-07	0.253875	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	0.000197493	0.0961	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172500.12	FIBP	-72944	3.93e-05	-0.111088	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000254855.1	KLC2-AS1	-450059	2.02e-06	0.261068	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	2.32e-12	-0.498675	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1.53e-07	0.253875	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	0.000197493	0.0961	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172500.12	FIBP	-72944	3.93e-05	-0.111088	2e-12
breast cancer	11_65935052	rs617791	ENSG00000172803.17	SNX32	101411	9.87e-11	-0.468198	7e-06
breast cancer	11_65935052	rs617791	ENSG00000172543.7	CTSW	55243	1.15e-05	0.216142	7e-06
breast cancer	11_65935052	rs617791	ENSG00000175334.7	BANF1	-67125	4.37e-05	0.106527	7e-06
breast cancer	11_65935052	rs617791	ENSG00000175376.8	EIF1AD	-67026	2.75e-06	-0.134602	7e-06
breast cancer	11_65935052	rs617791	ENSG00000254855.1	KLC2-AS1	-330602	1.33e-06	0.26863	7e-06
breast cancer	11_66843174	rs7570	ENSG00000174080.10	CTSF	274333	3.65e-08	0.194118	8e-06
breast cancer	11_803017	rs6597981	ENSG00000177685.16	CRACR2B	-23127	2.48e-08	0.26854	1e-12
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	2.66e-38	0.604342	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177600.8	RPLP2	-6737	1.2e-08	0.158748	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	1.03e-23	0.307689	1e-12
breast cancer	11_803017	rs6597981	ENSG00000184524.5	CEND1	12894	2.35e-09	0.400561	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177685.16	CRACR2B	-23127	2.48e-08	0.26854	3e-12
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	2.66e-38	0.604342	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177600.8	RPLP2	-6737	1.2e-08	0.158748	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	1.03e-23	0.307689	3e-12
breast cancer	11_803017	rs6597981	ENSG00000184524.5	CEND1	12894	2.35e-09	0.400561	3e-12
breast cancer	12_111162330	rs11065822	ENSG00000226469.1	ADAM1B	-764688	2.01e-06	-0.294505	6e-09
breast cancer	12_111446804	rs3184504	ENSG00000226469.1	ADAM1B	-480214	1.62e-05	0.26639	2e-06
breast cancer	12_111446804	rs3184504	ENSG00000226469.1	ADAM1B	-480214	1.62e-05	0.26639	1e-06
breast cancer	12_111621753	rs11065979	ENSG00000226469.1	ADAM1B	-305265	4.31e-06	-0.28489	5e-06
breast cancer	12_120997672	rs2464195	ENSG00000157895.11	C12orf43	-18830	9.57e-12	-0.287333	3e-08
breast cancer	14_67599772	rs7149859	ENSG00000100564.8	PIGH	-515	1.45e-13	-0.3469	7e-07
breast cancer	15_49580388	rs8027730	ENSG00000166262.15	FAM227B	-40543	1.5e-06	0.179062	3e-08
breast cancer	15_50402109	rs4774565	ENSG00000244879.6	GABPB1-AS1	46700	4.11e-13	-0.453987	2e-06
breast cancer	15_74300521	rs12904134	ENSG00000138621.11	PPCDC	-723034	0.000158009	-0.154762	8e-06
breast cancer	15_74843920	rs6938	ENSG00000178718.6	RPP25	-113298	2.11e-05	-0.163441	9e-08
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	9.94e-05	-0.137814	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	9.94e-05	-0.137814	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	9.94e-05	-0.137814	6e-08
breast cancer	15_75516399	rs8027365	ENSG00000140400.16	MAN2C1	148245	3.2e-58	0.736485	1e-07
breast cancer	15_79777420	rs166870	ENSG00000136371.10	MTHFS	-119959	1.06e-08	-0.373897	3e-07
breast cancer	15_90965985	rs77554484	ENSG00000166965.12	RCCD1	10189	3.07e-17	0.498852	1e-15
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	1.55e-05	0.215948	4e-08
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	1.55e-05	0.215948	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	1.55e-05	0.215948	2e-19
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	1.61e-11	-0.256777	4e-08
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	1.61e-11	-0.256777	3e-10
breast cancer	16_56497273	rs2303282	ENSG00000125124.11	BBS2	-23010	4.36e-10	-0.244324	3e-07
breast cancer	16_71475893	rs8050871	ENSG00000172137.18	CALB2	117180	8.19e-05	-0.212635	3e-06
breast cancer	16_71475893	rs8050871	ENSG00000167377.17	ZNF23	12798	1.82e-08	-0.26833	3e-06
breast cancer	16_71475893	rs8050871	ENSG00000040199.18	PHLPP2	-248808	1.28e-06	-0.215074	3e-06
breast cancer	16_81924693	rs7192724	ENSG00000140945.16	CDH13	-702110	1.92e-06	-0.231499	3e-06
breast cancer	17_2195889	rs16952006	ENSG00000167720.12	SRR	-107494	2.68e-06	-0.431073	3e-06
breast cancer	17_45394123	rs4763	ENSG00000263503.1	MAPK8IP1P2	-208217	1.37e-40	1.0349	2e-08
breast cancer	17_45394123	rs4763	ENSG00000264070.1	DND1P1	-191748	5.61e-34	1.07027	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214401.4	KANSL1-AS1	-799453	5.73e-40	1.04516	2e-08
breast cancer	17_45394123	rs4763	ENSG00000176681.14	LRRC37A	-898610	5.04e-05	0.348956	2e-08
breast cancer	17_45394123	rs4763	ENSG00000204650.14	LINC02210	-226205	4.72e-54	0.967634	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214425.7	LRRC37A4P	-156212	5.95e-50	-1.12292	2e-08
breast cancer	17_45941122	rs62061734	ENSG00000176681.14	LRRC37A	-351611	2.79e-05	0.345072	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000185829.17	ARL17A	-638560	3.72e-13	0.637107	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214425.7	LRRC37A4P	390787	4.3e-69	-1.19437	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000263503.1	MAPK8IP1P2	338782	9.5e-58	1.12352	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000238083.7	LRRC37A2	-570389	9.38e-46	0.928924	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000204650.14	LINC02210	320794	1.27e-83	1.05581	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000108379.9	WNT3	-891936	9.57e-08	0.399613	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000073969.18	NSF	-649547	4.2e-07	-0.204358	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000264070.1	DND1P1	355251	2.51e-45	1.146	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214401.4	KANSL1-AS1	-252454	5.14e-64	1.17945	8e-12
breast cancer	17_46751565	rs199533	ENSG00000214401.4	KANSL1-AS1	557989	3.13e-77	1.24287	5e-08
breast cancer	17_46751565	rs199533	ENSG00000108379.9	WNT3	-81493	8.23e-08	0.400634	5e-08
breast cancer	17_46751565	rs199533	ENSG00000176681.14	LRRC37A	458832	5.94e-06	0.37116	5e-08
breast cancer	17_46751565	rs199533	ENSG00000185829.17	ARL17A	171883	1.13e-13	0.648377	5e-08
breast cancer	17_46751565	rs199533	ENSG00000238083.7	LRRC37A2	240054	7.09e-49	0.949062	5e-08
breast cancer	17_46751565	rs199533	ENSG00000073969.18	NSF	160896	1.04e-06	-0.197117	5e-08
breast cancer	17_46788237	rs199498	ENSG00000176681.14	LRRC37A	495504	8.05e-05	0.316409	2e-08
breast cancer	17_46788237	rs199498	ENSG00000108379.9	WNT3	-44821	1.51e-09	0.437542	2e-08
breast cancer	17_46788237	rs199498	ENSG00000185829.17	ARL17A	208555	1.59e-10	0.55095	2e-08
breast cancer	17_46788237	rs199498	ENSG00000214401.4	KANSL1-AS1	594661	1.31e-44	1.01483	2e-08
breast cancer	17_46788237	rs199498	ENSG00000238083.7	LRRC37A2	276726	1.15e-30	0.771856	2e-08
breast cancer	17_46788237	rs199498	ENSG00000073969.18	NSF	197568	3.91e-06	-0.182038	2e-08
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	1.37e-11	-0.345923	1e-08
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	1.37e-11	-0.345923	8e-09
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	1.37e-11	-0.345923	5e-12
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	1.37e-11	-0.345923	2e-13
breast cancer	17_55132413	rs2787486	ENSG00000166263.13	STXBP4	163627	7.81e-08	-0.267286	6e-29
breast cancer	17_55132413	rs2787486	ENSG00000166263.13	STXBP4	163627	7.81e-08	-0.267286	2e-34
breast cancer	17_55135212	rs2628317	ENSG00000166263.13	STXBP4	166426	1.47e-06	-0.262714	4e-16
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	1.64e-14	-0.337826	4e-10
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	1.64e-14	-0.337826	5e-07
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	1.64e-14	-0.337826	6e-06
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	1.64e-14	-0.337826	1e-09
breast cancer	17_81211408	rs9913021	ENSG00000141577.13	CEP131	-11591	3.3e-07	-0.164895	2e-06
breast cancer	17_81211408	rs9913021	ENSG00000224877.3	NDUFAF8	-27831	1.96e-10	-0.197635	2e-06
breast cancer	17_82597601	rs62079673	ENSG00000141580.15	WDR45B	-50952	5.04e-07	0.184936	1e-06
breast cancer	17_82946434	rs898097	ENSG00000141560.14	FN3KRP	229751	1.46e-09	-0.325639	2e-06
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	1.11e-06	0.319387	1e-12
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	1.47e-10	0.319205	1e-12
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	6.93e-10	-0.244898	1e-12
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	1.11e-06	0.319387	7e-21
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	1.47e-10	0.319205	7e-21
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	6.93e-10	-0.244898	7e-21
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	1.11e-06	0.319387	9e-13
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	1.47e-10	0.319205	9e-13
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	6.93e-10	-0.244898	9e-13
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	1.11e-06	0.319387	2e-09
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	1.47e-10	0.319205	2e-09
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	6.93e-10	-0.244898	2e-09
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	1.11e-06	0.319387	4e-13
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	1.47e-10	0.319205	4e-13
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	6.93e-10	-0.244898	4e-13
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	1.11e-06	0.319387	2e-06
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	1.47e-10	0.319205	2e-06
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	6.93e-10	-0.244898	2e-06
breast cancer	19_17279482	rs4808075	ENSG00000099330.8	OCEL1	53278	2.25e-05	0.181965	2e-09
breast cancer	19_17279482	rs4808075	ENSG00000099330.8	OCEL1	53278	2.25e-05	0.181965	4e-07
breast cancer	19_17282085	rs8100241	ENSG00000099330.8	OCEL1	55881	6.33e-09	-0.222152	4e-08
breast cancer	19_17282085	rs8100241	ENSG00000130312.6	MRPL34	-10747	6e-08	0.165426	4e-08
breast cancer	19_17283116	rs56069439	ENSG00000099330.8	OCEL1	56912	5.52e-05	0.174257	9e-09
breast cancer	19_17283116	rs56069439	ENSG00000099330.8	OCEL1	56912	5.52e-05	0.174257	8e-19
breast cancer	19_17283116	rs56069439	ENSG00000099330.8	OCEL1	56912	5.52e-05	0.174257	1e-32
breast cancer	19_17283315	rs2363956	ENSG00000130312.6	MRPL34	-9517	1.45e-07	0.160028	2e-06
breast cancer	19_17283315	rs2363956	ENSG00000099330.8	OCEL1	57111	1.97e-08	-0.214174	2e-06
breast cancer	19_17283315	rs2363956	ENSG00000130312.6	MRPL34	-9517	1.45e-07	0.160028	2e-08
breast cancer	19_17283315	rs2363956	ENSG00000099330.8	OCEL1	57111	1.97e-08	-0.214174	2e-08
breast cancer	19_17290595	rs67397200	ENSG00000099330.8	OCEL1	64391	2.02e-05	0.18073	2e-08
breast cancer	19_17290595	rs67397200	ENSG00000099330.8	OCEL1	64391	2.02e-05	0.18073	3e-17
breast cancer	19_17290595	rs67397200	ENSG00000099330.8	OCEL1	64391	2.02e-05	0.18073	3e-37
breast cancer	19_19417997	rs1469713	ENSG00000160161.9	CILP2	-120251	1.54e-09	0.315505	1e-10
breast cancer	19_19417997	rs1469713	ENSG00000187664.8	HAPLN4	155201	9.03e-15	0.483854	1e-10
breast cancer	19_19417997	rs1469713	ENSG00000213996.12	TM6SF2	144606	1.89e-11	0.337065	1e-10
breast cancer	19_19434887	rs2965183	ENSG00000187664.8	HAPLN4	172091	5.9e-15	0.490171	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000213996.12	TM6SF2	161496	6.09e-12	0.346982	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000160161.9	CILP2	-103361	1.54e-09	0.317629	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000187664.8	HAPLN4	172091	5.9e-15	0.490171	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000213996.12	TM6SF2	161496	6.09e-12	0.346982	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000160161.9	CILP2	-103361	1.54e-09	0.317629	1e-11
breast cancer	19_19535463	rs2304098	ENSG00000213996.12	TM6SF2	262072	6.04e-12	0.344819	2e-11
breast cancer	19_19535463	rs2304098	ENSG00000160161.9	CILP2	-2785	1.17e-09	0.317798	2e-11
breast cancer	19_19535463	rs2304098	ENSG00000187664.8	HAPLN4	272667	6.83e-14	0.469196	2e-11
breast cancer	19_19535463	rs2304098	ENSG00000064547.13	LPAR2	-93467	8.46e-05	-0.145374	2e-11
breast cancer	19_29786822	rs113701136	ENSG00000105173.13	CCNE1	-25076	5.58e-06	-0.18239	2e-07
breast cancer	19_29786822	rs113701136	ENSG00000105173.13	CCNE1	-25076	5.58e-06	-0.18239	7e-09
breast cancer	19_43779080	rs1685191	ENSG00000176222.8	ZNF404	-104971	4.98e-11	-0.247572	4e-20
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	7.75e-20	-0.334081	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000267191.1	ZNF45-AS1	-119640	9.3e-06	-0.303407	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	7.75e-20	-0.334081	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000267191.1	ZNF45-AS1	-119640	9.3e-06	-0.303407	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	7.75e-20	-0.334081	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000267191.1	ZNF45-AS1	-119640	9.3e-06	-0.303407	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	7.75e-20	-0.334081	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000267191.1	ZNF45-AS1	-119640	9.3e-06	-0.303407	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	7.75e-20	-0.334081	2e-14
breast cancer	19_43782361	rs3760982	ENSG00000267191.1	ZNF45-AS1	-119640	9.3e-06	-0.303407	2e-14
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	7.75e-20	-0.334081	1e-16
breast cancer	19_43782361	rs3760982	ENSG00000267191.1	ZNF45-AS1	-119640	9.3e-06	-0.303407	1e-16
breast cancer	19_43919418	rs375066	ENSG00000267191.1	ZNF45-AS1	17417	3.13e-08	-0.386934	2e-14
breast cancer	19_43919418	rs375066	ENSG00000176222.8	ZNF404	35367	5.37e-33	-0.431349	2e-14
breast cancer	19_51869723	rs10411161	ENSG00000198093.10	ZNF649	-35317	9.37e-06	-0.234899	7e-06
breast cancer	19_51869723	rs10411161	ENSG00000161551.14	ZNF577	-18253	1.42e-05	-0.193907	7e-06
breast cancer	19_51942133	rs8113308	ENSG00000161551.14	ZNF577	54157	4.83e-05	-0.164998	6e-07
breast cancer	19_51942133	rs8113308	ENSG00000269235.1	ZNF350-AS1	-7001	6.67e-15	0.657707	6e-07
breast cancer	2_171568284	rs11675683	ENSG00000071967.11	CYBRD1	46037	3.73e-06	0.113887	4e-08
breast cancer	2_201258707	rs3769821	ENSG00000155749.12	FLACC1	-98691	5.78e-10	-0.327107	4e-18
breast cancer	2_201258707	rs3769821	ENSG00000064012.21	CASP8	25264	1.57e-08	0.262537	4e-18
breast cancer	2_201279205	rs10931936	ENSG00000064012.21	CASP8	45762	4.16e-09	0.284444	6e-06
breast cancer	2_201279205	rs10931936	ENSG00000155749.12	FLACC1	-78193	1.02e-11	-0.372709	6e-06
breast cancer	2_201279205	rs10931936	ENSG00000240344.8	PPIL3	389902	6.19e-05	-0.262106	6e-06
breast cancer	2_201288355	rs1035142	ENSG00000064012.21	CASP8	54912	7.21e-13	0.324296	3e-09
breast cancer	2_201288355	rs1035142	ENSG00000155749.12	FLACC1	-69043	7.21e-14	-0.385162	3e-09
breast cancer	2_201288502	rs700635	ENSG00000064012.21	CASP8	55059	4.16e-09	0.284444	5e-16
breast cancer	2_201288502	rs700635	ENSG00000155749.12	FLACC1	-68896	1.02e-11	-0.372709	5e-16
breast cancer	2_201288502	rs700635	ENSG00000240344.8	PPIL3	399199	6.19e-05	-0.262106	5e-16
breast cancer	2_201316524	rs1830298	ENSG00000240344.8	PPIL3	427221	6.19e-05	-0.262106	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.02e-11	-0.372709	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	4.16e-09	0.284444	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000240344.8	PPIL3	427221	6.19e-05	-0.262106	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.02e-11	-0.372709	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	4.16e-09	0.284444	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000240344.8	PPIL3	427221	6.19e-05	-0.262106	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.02e-11	-0.372709	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	4.16e-09	0.284444	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000240344.8	PPIL3	427221	6.19e-05	-0.262106	6e-24
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.02e-11	-0.372709	6e-24
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	4.16e-09	0.284444	6e-24
breast cancer	2_201384985	rs2714486	ENSG00000155749.12	FLACC1	27587	2.15e-07	0.339084	7e-10
breast cancer	2_201384985	rs2714486	ENSG00000064012.21	CASP8	151542	3.94e-05	-0.23716	7e-10
breast cancer	2_201502866	rs77688320	ENSG00000155749.12	FLACC1	145468	8.38e-06	0.310595	3e-09
breast cancer	2_25222417	rs113953597	ENSG00000115138.10	POMC	53514	6.6e-06	0.374337	1e-08
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	8.99e-07	0.196638	3e-06
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	8.99e-07	0.196638	5e-09
breast cancer	2_28897867	rs4577244	ENSG00000171103.10	TRMT61B	27566	2.97e-06	0.18706	2e-09
breast cancer	2_41931164	rs17029056	ENSG00000205086.6	LINC02898	-23102	1.85e-05	-0.308805	4e-06
breast cancer	2_69900097	rs6716937	ENSG00000087338.4	GMCL1	70455	1.59e-05	-0.168822	4e-07
breast cancer	2_69900097	rs6716937	ENSG00000124380.10	SNRNP27	6537	1.32e-10	-0.221669	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000160305.17	DIP2A	-98591	1.92e-06	-0.38308	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	2.45e-20	-1.10071	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000160305.17	DIP2A	-98591	1.92e-06	-0.38308	6e-09
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	2.45e-20	-1.10071	6e-09
breast cancer	22_29273659	rs4820803	ENSG00000100263.13	RHBDD3	5681	9.08e-05	0.179175	2e-06
breast cancer	22_30027471	rs12537	ENSG00000184117.11	NIPSNAP1	446134	3.2e-05	-0.120891	9e-07
breast cancer	22_38172826	rs738321	ENSG00000184381.18	PLA2G6	-32864	2.72e-06	0.157626	7e-14
breast cancer	22_38172826	rs738321	ENSG00000198792.12	TMEM184B	-100208	1.46e-07	-0.179492	7e-14
breast cancer	22_38172826	rs738321	ENSG00000184381.18	PLA2G6	-32864	2.72e-06	0.157626	1e-13
breast cancer	22_38172826	rs738321	ENSG00000198792.12	TMEM184B	-100208	1.46e-07	-0.179492	1e-13
breast cancer	22_38174306	rs4820318	ENSG00000184381.18	PLA2G6	-31384	2.23e-06	0.159998	1e-13
breast cancer	22_38174306	rs4820318	ENSG00000198792.12	TMEM184B	-98728	1.26e-07	-0.181561	1e-13
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	1.93e-17	-0.875101	4e-06
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	1.93e-17	-0.875101	9e-14
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	1.93e-17	-0.875101	3e-17
breast cancer	22_40600363	rs17002034	ENSG00000100393.12	EP300	-491423	2.38e-05	-0.167811	6e-11
breast cancer	22_42745087	rs4820477	ENSG00000128274.15	A4GALT	23789	1.93e-06	-0.172827	9e-07
breast cancer	3_156645453	rs2136690	ENSG00000240875.5	LINC00886	-171609	5.86e-06	-0.192028	4e-06
breast cancer	3_156927968	rs7637701	ENSG00000240875.5	LINC00886	110906	4.66e-15	-0.30675	1e-06
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	0.000169458	0.413353	8e-07
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	0.000169458	0.413353	2e-08
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	0.000169458	0.413353	6e-15
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	0.000169458	0.413353	7e-16
breast cancer	3_46846708	rs56387622	ENSG00000188086.13	PRSS45P	101953	7.97e-07	0.543401	5e-19
breast cancer	3_47364189	rs146331761	ENSG00000178038.16	ALS2CL	670485	0.000188802	-0.396732	5e-07
breast cancer	3_47364189	rs146331761	ENSG00000114648.11	KLHL18	76969	0.000248626	-0.32832	5e-07
breast cancer	4_105435604	rs77928427	ENSG00000138777.19	PPA2	-38477	3.52e-06	-0.142603	3e-08
breast cancer	4_85740190	rs71599425	ENSG00000250062.5	MAPK10-AS1	-377722	2.1e-05	0.743634	6e-06
breast cancer	5_124400713	rs6878727	ENSG00000253807.5	LINC01170	-4366	3.04e-16	-0.398287	6e-06
breast cancer	5_128098106	rs1112956	ENSG00000245937.7	SLC12A2-DT	14934	4.19e-21	0.524679	9e-06
breast cancer	5_128227188	rs36715	ENSG00000245937.7	SLC12A2-DT	144016	2.08e-08	0.286088	4e-06
breast cancer	5_132304843	rs6860806	ENSG00000233006.6	MIR3936HG	-64805	1.9e-13	0.359139	3e-08
breast cancer	5_132304843	rs6860806	ENSG00000233006.6	MIR3936HG	-64805	1.9e-13	0.359139	8e-08
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	8.81e-05	-0.162321	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	4.78e-17	-0.410171	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	8.81e-05	-0.162321	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	4.78e-17	-0.410171	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	8.81e-05	-0.162321	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	4.78e-17	-0.410171	1e-08
breast cancer	5_132497907	rs736801	ENSG00000233006.6	MIR3936HG	128259	7.19e-14	0.384198	8e-08
breast cancer	5_132497907	rs736801	ENSG00000197536.11	IRF1-AS1	87271	4.34e-06	0.196526	8e-08
breast cancer	5_149053986	rs250677	ENSG00000169247.11	SH3TC2	-9177	1.96e-30	0.503096	8e-06
breast cancer	5_154976135	rs6890610	ENSG00000155508.13	CNOT8	118582	1.33e-06	-0.1794	6e-06
breast cancer	5_44145829	rs11749176	ENSG00000112992.16	NNT	543137	0.000179165	0.0907539	9e-10
breast cancer	5_44662413	rs4415084	ENSG00000251141.5	MRPS30-DT	-146364	4.61e-20	-0.427671	3e-09
breast cancer	5_44662413	rs4415084	ENSG00000251141.5	MRPS30-DT	-146364	4.61e-20	-0.427671	8e-11
breast cancer	5_44663035	rs7701466	ENSG00000251141.5	MRPS30-DT	-145742	1.7e-21	-0.434498	2e-10
breast cancer	5_44672840	rs55788307	ENSG00000251141.5	MRPS30-DT	-135937	2.33e-17	-0.404958	4e-14
breast cancer	5_44701316	rs714130	ENSG00000251141.5	MRPS30-DT	-107461	2.98e-20	-0.423524	7e-09
breast cancer	5_44706396	rs10941679	ENSG00000251141.5	MRPS30-DT	-102381	5.33e-08	-0.306284	1e-80
breast cancer	5_44706396	rs10941679	ENSG00000251141.5	MRPS30-DT	-102381	5.33e-08	-0.306284	3e-09
breast cancer	5_44706396	rs10941679	ENSG00000251141.5	MRPS30-DT	-102381	5.33e-08	-0.306284	8e-25
breast cancer	5_44706396	rs10941679	ENSG00000251141.5	MRPS30-DT	-102381	5.33e-08	-0.306284	1e-30
breast cancer	5_44706396	rs10941679	ENSG00000251141.5	MRPS30-DT	-102381	5.33e-08	-0.306284	6e-73
breast cancer	5_44706396	rs10941679	ENSG00000251141.5	MRPS30-DT	-102381	5.33e-08	-0.306284	5e-32
breast cancer	5_44706396	rs10941679	ENSG00000251141.5	MRPS30-DT	-102381	5.33e-08	-0.306284	2e-37
breast cancer	5_44706396	rs10941679	ENSG00000251141.5	MRPS30-DT	-102381	5.33e-08	-0.306284	3e-26
breast cancer	5_44822356	rs930395	ENSG00000251141.5	MRPS30-DT	13579	6.4e-08	-0.311283	2e-58
breast cancer	5_44874903	rs7716600	ENSG00000251141.5	MRPS30-DT	66126	2.31e-08	0.320335	7e-08
breast cancer	5_44874903	rs7716600	ENSG00000251141.5	MRPS30-DT	66126	2.31e-08	0.320335	7e-07
breast cancer	5_44926416	rs10043344	ENSG00000251141.5	MRPS30-DT	117639	2.55e-19	0.42349	5e-10
breast cancer	5_45074531	rs13183434	ENSG00000251141.5	MRPS30-DT	265754	5.31e-05	-0.304523	4e-17
breast cancer	5_45653810	rs2589161	ENSG00000164588.6	HCN1	-42688	2.56e-08	-0.209417	3e-08
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	3.61e-06	0.250102	5e-09
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	3.61e-06	0.250102	3e-27
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	3.61e-06	0.250102	1e-39
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	3.61e-06	0.250102	1e-08
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	3.61e-06	0.250102	7e-20
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	3.61e-06	0.250102	3e-36
breast cancer	5_56737113	rs1862626	ENSG00000155542.11	SETD9	-172147	3.61e-06	0.250102	4e-12
breast cancer	5_56926293	rs11957276	ENSG00000155542.11	SETD9	17033	5.3e-05	0.240392	5e-11
breast cancer	5_56977866	rs10036895	ENSG00000155542.11	SETD9	68606	2.46e-18	0.423137	2e-12
breast cancer	5_81972251	rs111549985	ENSG00000152348.15	ATG10	226	2.37e-23	0.76414	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000205464.11	ATP6AP1L	-307211	6.51e-35	0.809474	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000186468.12	RPS23	-306326	1.75e-37	-0.475452	6e-12
breast cancer	5_82161539	rs2407064	ENSG00000186468.12	RPS23	-117038	1.28e-37	0.463645	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000205464.11	ATP6AP1L	-117923	2.46e-33	-0.773534	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000152348.15	ATG10	189514	1.2e-21	-0.718736	3e-08
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.41e-20	-0.717287	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.54e-34	-0.801934	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.01e-39	0.483924	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.41e-20	-0.717287	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.54e-34	-0.801934	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.01e-39	0.483924	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.41e-20	-0.717287	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.54e-34	-0.801934	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.01e-39	0.483924	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.41e-20	-0.717287	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.54e-34	-0.801934	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.01e-39	0.483924	1e-12
breast cancer	5_82340549	rs2407156	ENSG00000205464.11	ATP6AP1L	61087	6.39e-27	0.673457	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000186468.12	RPS23	61972	6.76e-24	-0.364672	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000152348.15	ATG10	368524	6.19e-15	0.572796	2e-06
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.24e-08	-0.261199	2e-12
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.24e-08	-0.261199	4e-08
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.24e-08	-0.261199	8e-10
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.24e-08	-0.261199	3e-12
breast cancer	6_25710343	rs68006638	ENSG00000186470.13	BTN3A2	-654816	2.7e-25	-1.12681	2e-07
breast cancer	6_25874195	rs13198474	ENSG00000186470.13	BTN3A2	-490964	3.78e-26	-1.16017	2e-07
breast cancer	6_26175638	rs17598658	ENSG00000186470.13	BTN3A2	-189521	1.88e-34	-1.17835	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000186470.13	BTN3A2	98187	1.28e-41	-1.27223	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000124613.8	ZNF391	-911269	6.04e-05	0.387087	2e-09
breast cancer	6_26993501	rs34546498	ENSG00000124613.8	ZNF391	-381114	0.00012123	0.377297	9e-10
breast cancer	6_26993501	rs34546498	ENSG00000186470.13	BTN3A2	628342	2.59e-39	-1.26476	9e-10
breast cancer	6_27307055	rs56114371	ENSG00000216901.1	ZNF603P	-869133	4.01e-06	0.682567	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000124613.8	ZNF391	-67560	0.00012123	0.377297	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000186470.13	BTN3A2	941896	2.59e-39	-1.26476	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000219392.1	ZNF602P	-808573	6.17e-13	-1.04976	2e-09
breast cancer	6_27457865	rs34196306	ENSG00000189298.13	ZKSCAN3	-892049	3.78e-05	-0.369713	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000124613.8	ZNF391	83250	3.57e-05	0.407859	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000219392.1	ZNF602P	-657763	3.87e-13	-1.06569	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000216901.1	ZNF603P	-718323	7.04e-06	0.670317	1e-09
breast cancer	6_27873148	rs45509595	ENSG00000124613.8	ZNF391	498533	0.000131182	0.370591	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000219392.1	ZNF602P	-242480	7.41e-14	-1.07346	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000216901.1	ZNF603P	-303040	1.1e-06	0.710724	5e-09
breast cancer	6_28106103	rs34662244	ENSG00000216901.1	ZNF603P	-70085	2.56e-07	0.743784	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000219392.1	ZNF602P	-9525	1.12e-13	-1.05795	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000189298.13	ZKSCAN3	-243811	0.000476033	-0.306027	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000124613.8	ZNF391	731488	0.000126204	0.368551	3e-09
breast cancer	6_28364364	rs13214023	ENSG00000216901.1	ZNF603P	188176	2.79e-06	0.684451	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000219392.1	ZNF602P	248736	7.68e-13	-1.03248	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000124613.8	ZNF391	989749	0.000130588	0.37078	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000189298.13	ZKSCAN3	14450	0.0003859	-0.313351	1e-09
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	1.65e-05	0.148223	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	6.63e-09	0.376465	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	1.65e-05	0.148223	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	6.63e-09	0.376465	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	1.65e-05	0.148223	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	6.63e-09	0.376465	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	1.65e-05	0.148223	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	6.63e-09	0.376465	3e-07
breast cancer	6_29280372	rs3130834	ENSG00000204644.9	ZFP57	-400738	9.47e-11	0.999391	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000204622.11	HLA-J	-725599	2.2e-05	-0.504693	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000189298.13	ZKSCAN3	930458	0.000255408	-0.325244	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000204632.11	HLA-G	-546595	0.000182079	-0.563016	5e-09
breast cancer	6_29388554	rs9257809	ENSG00000204632.11	HLA-G	-438413	4.75e-05	-0.610613	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204657.3	OR2H2	-198901	0.000243297	0.46365	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204622.11	HLA-J	-617417	8.81e-06	-0.527828	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204644.9	ZFP57	-292556	5.96e-13	1.10263	3e-08
breast cancer	6_29509637	rs1233480	ENSG00000204644.9	ZFP57	-171473	4.07e-10	0.77015	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000281831.1	HCP5B	-364146	0.000207195	0.440888	5e-08
breast cancer	6_29693039	rs3116813	ENSG00000281831.1	HCP5B	-180744	6.38e-05	0.56438	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204632.11	HLA-G	-133928	7.86e-06	-0.633976	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204657.3	OR2H2	105584	1.36e-05	0.518593	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204644.9	ZFP57	11929	1.34e-17	1.21844	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204622.11	HLA-J	-312932	1.4e-08	-0.631983	6e-07
breast cancer	6_29785031	rs147680653	ENSG00000204622.11	HLA-J	-220940	2.41e-08	-0.627498	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000281831.1	HCP5B	-88752	6.28e-05	0.569769	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000204632.11	HLA-G	-41936	1.26e-05	-0.625364	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000204644.9	ZFP57	103921	2.37e-18	1.25395	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000204657.3	OR2H2	197576	5.74e-06	0.544626	1e-06
breast cancer	6_29882943	rs1611579	ENSG00000204622.11	HLA-J	-123028	6.04e-08	-0.573402	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204657.3	OR2H2	295488	2.4e-07	0.579908	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000281831.1	HCP5B	9160	8.83e-06	0.592754	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204644.9	ZFP57	201833	8.59e-17	1.12875	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204632.11	HLA-G	55976	1.69e-06	-0.642241	8e-07
breast cancer	6_30003183	rs3094146	ENSG00000204632.11	HLA-G	176216	2.73e-06	-0.62301	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000281831.1	HCP5B	129400	1.72e-05	0.567925	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204622.11	HLA-J	-2788	3.96e-06	-0.486366	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204644.9	ZFP57	322073	2.67e-15	1.06669	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204657.3	OR2H2	415728	5.33e-07	0.55774	7e-07
breast cancer	6_30107326	rs2523992	ENSG00000204657.3	OR2H2	519871	1.1e-06	0.41406	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000176998.4	HCG4	314890	7.44e-08	-0.563914	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000204644.9	ZFP57	426216	0.000121014	0.411436	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000230795.3	HLA-K	180148	8.16e-05	-0.41075	2e-07
breast cancer	6_30365728	rs3094054	ENSG00000204536.13	CCHCR1	-792510	1.08e-05	0.346386	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204644.9	ZFP57	684618	1.06e-11	0.94137	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204632.11	HLA-G	538761	6.19e-06	-0.608909	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204540.10	PSORS1C1	-749022	4.64e-11	-0.808093	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204622.11	HLA-J	359757	8.32e-05	-0.422197	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204657.3	OR2H2	778273	2.51e-05	0.477703	1e-07
breast cancer	6_30374976	rs115707823	ENSG00000228789.6	HCG22	-678474	1.52e-05	-0.536125	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204644.9	ZFP57	693866	3.57e-11	0.836792	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204657.3	OR2H2	787521	0.000139769	0.394354	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204540.10	PSORS1C1	-739774	1.26e-07	-0.598459	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000228789.6	HCG22	-678474	1.52e-05	-0.536125	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204644.9	ZFP57	693866	3.57e-11	0.836792	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204657.3	OR2H2	787521	0.000139769	0.394354	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204540.10	PSORS1C1	-739774	1.26e-07	-0.598459	5e-07
breast cancer	6_30473526	rs3132615	ENSG00000137411.16	VARS2	-440679	0.000117008	-0.422939	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204632.11	HLA-G	646559	1.67e-05	-0.562915	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204536.13	CCHCR1	-684712	3.5e-06	0.353274	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204622.11	HLA-J	467555	0.000105039	-0.40347	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204657.3	OR2H2	886071	2.56e-05	0.462476	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204644.9	ZFP57	792416	1.58e-09	0.816489	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204540.10	PSORS1C1	-641224	4.7e-12	-0.819722	2e-06
breast cancer	6_30576624	rs3132610	ENSG00000228789.6	HCG22	-476826	0.000146912	-0.501694	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000137411.16	VARS2	-337581	1.94e-05	-0.467034	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204540.10	PSORS1C1	-538126	2.51e-14	-0.895008	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204536.13	CCHCR1	-581614	8.2e-06	0.339666	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204657.3	OR2H2	989169	6.7e-05	0.438124	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204622.11	HLA-J	570653	8.15e-05	-0.409176	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204632.11	HLA-G	749657	8.51e-07	-0.640019	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204644.9	ZFP57	895514	7.04e-09	0.784092	1e-06
breast cancer	6_30682249	rs9262142	ENSG00000240053.8	LY6G5B	-987918	1.13e-05	0.225966	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204540.10	PSORS1C1	-432501	1.27e-14	-0.913845	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000137411.16	VARS2	-231956	1.42e-05	-0.479441	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204536.13	CCHCR1	-475989	1.03e-06	0.374788	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000228789.6	HCG22	-371201	0.000143317	-0.507793	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204622.11	HLA-J	676278	0.000133776	-0.401156	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204632.11	HLA-G	855282	5.07e-07	-0.659422	3e-06
breast cancer	6_30793795	rs3129984	ENSG00000204632.11	HLA-G	966828	3.97e-07	-0.65803	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000228789.6	HCG22	-259655	4.93e-05	-0.535203	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000240053.8	LY6G5B	-876372	2.19e-05	0.216223	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204540.10	PSORS1C1	-320955	4.43e-16	-0.947721	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000137411.16	VARS2	-120410	7.5e-06	-0.488758	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204536.13	CCHCR1	-364443	3.29e-07	0.386719	8e-06
breast cancer	6_31347004	rs115392158	ENSG00000204536.13	CCHCR1	188766	2.73e-05	0.205896	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204540.10	PSORS1C1	232254	2.18e-18	-0.6511	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000277402.1	MIR6891	-8312	6.33e-05	-0.286479	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000228789.6	HCG22	293554	2.68e-11	-0.552716	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204338.8	CYP21A1P	-658685	6.54e-06	-0.269925	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000244731.7	C4A	-635020	8.69e-11	-0.346381	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204536.13	CCHCR1	188766	2.73e-05	0.205896	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204540.10	PSORS1C1	232254	2.18e-18	-0.6511	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000277402.1	MIR6891	-8312	6.33e-05	-0.286479	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000228789.6	HCG22	293554	2.68e-11	-0.552716	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204338.8	CYP21A1P	-658685	6.54e-06	-0.269925	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000244731.7	C4A	-635020	8.69e-11	-0.346381	9e-06
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	1.3e-06	-0.460141	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000204257.14	HLA-DMA	-269398	4.39e-06	0.295495	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000204338.8	CYP21A1P	694007	0.000114605	-0.258057	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000244731.7	C4A	717672	2.96e-10	-0.374887	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000232629.8	HLA-DQB2	-63838	3.54e-12	0.63645	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	1.3e-06	-0.460141	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000204257.14	HLA-DMA	-269398	4.39e-06	0.295495	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000204338.8	CYP21A1P	694007	0.000114605	-0.258057	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000244731.7	C4A	717672	2.96e-10	-0.374887	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000232629.8	HLA-DQB2	-63838	3.54e-12	0.63645	6e-08
breast cancer	6_33272092	rs17215231	ENSG00000235863.3	B3GALT4	-5040	7.41e-11	0.421048	9e-13
breast cancer	6_33272092	rs17215231	ENSG00000231500.6	RPS18	44	2.16e-67	-0.811138	9e-13
breast cancer	6_43259403	rs111342015	ENSG00000112667.12	DNPH1	29919	2.89e-27	-0.752916	9e-08
breast cancer	7_100437651	rs117911427	ENSG00000121716.20	PILRB	85475	1.69e-07	0.837493	7e-06
breast cancer	7_100437651	rs117911427	ENSG00000085514.15	PILRA	64206	3.23e-05	0.718535	7e-06
breast cancer	7_100437651	rs117911427	ENSG00000242294.6	STAG3L5P	101239	3.36e-09	1.14036	7e-06
breast cancer	7_102478605	rs369574511	ENSG00000170667.14	RASA4B	-39176	3.93e-05	-0.288141	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000005075.15	POLR2J	-302	4.63e-05	0.104698	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000161036.12	LRWD1	13676	1.06e-07	-0.20118	2e-07
breast cancer	7_144351809	rs62485509	ENSG00000204959.4	ARHGEF34P	64843	2.23e-07	-0.478608	4e-12
breast cancer	7_144377836	rs720475	ENSG00000213214.4	ARHGEF35	189441	6.88e-05	0.347261	7e-12
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.73e-07	-0.402582	7e-12
breast cancer	7_144377836	rs720475	ENSG00000213214.4	ARHGEF35	189441	6.88e-05	0.347261	7e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.73e-07	-0.402582	7e-11
breast cancer	7_144377836	rs720475	ENSG00000213214.4	ARHGEF35	189441	6.88e-05	0.347261	2e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.73e-07	-0.402582	2e-11
breast cancer	7_144377836	rs720475	ENSG00000213214.4	ARHGEF35	189441	6.88e-05	0.347261	4e-10
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.73e-07	-0.402582	4e-10
breast cancer	7_144377836	rs720475	ENSG00000213214.4	ARHGEF35	189441	6.88e-05	0.347261	1e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.73e-07	-0.402582	1e-11
breast cancer	7_144377836	rs720475	ENSG00000213214.4	ARHGEF35	189441	6.88e-05	0.347261	1e-08
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.73e-07	-0.402582	1e-08
breast cancer	7_144477198	rs13230714	ENSG00000204959.4	ARHGEF34P	190232	0.00010882	-0.29827	1e-06
breast cancer	7_55125270	rs12718945	ENSG00000146648.17	EGFR	106249	1.1e-05	-0.18852	4e-06
breast cancer	7_74696373	rs74910854	ENSG00000263001.5	GTF2I	38706	4.82e-17	0.334865	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000277053.4	GTF2IP1	-541323	2.92e-12	-0.759509	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000123965.13	PMS2P5	-197743	1.23e-11	0.813247	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000196275.13	GTF2IRD2	-155178	2.69e-12	0.657952	5e-06
breast cancer	7_94484487	rs17268829	ENSG00000127990.15	SGCE	-171722	3.04e-05	0.154487	4e-15
breast cancer	7_94484487	rs17268829	ENSG00000127990.15	SGCE	-171722	3.04e-05	0.154487	5e-13
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	7.78e-19	0.581793	6e-09
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	7.78e-19	0.581793	3e-08
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	7.78e-19	0.581793	3e-07
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	7.78e-19	0.581793	1e-08
breast cancer	8_22634616	rs6558174	ENSG00000158941.16	CCAR2	29984	2.56e-07	0.158592	3e-06
breast cancer	8_30372068	rs7834448	ENSG00000254109.5	RBPMS-AS1	-13333	7.67e-06	-0.272224	7e-06
breast cancer	9_103912867	rs718857	ENSG00000136824.18	SMC2	-181393	1.59e-21	-0.348198	2e-06
breast cancer	9_104094512	rs4742903	ENSG00000136824.18	SMC2	252	2.79e-75	-0.545496	2e-07
breast cancer	9_104094512	rs4742903	ENSG00000136824.18	SMC2	252	2.79e-75	-0.545496	3e-08
breast cancer	9_133463535	rs3124765	ENSG00000160325.14	CACFD1	3570	1.14e-05	-0.205771	2e-06
breast cancer	9_133463535	rs3124765	ENSG00000148290.9	SURF1	106859	1.69e-11	0.373805	2e-06