DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
breast cancer	1_10506158	rs616488	ENSG00000142655.12	PEX14	31271	1.12e-12	-0.233017	2e-23
breast cancer	1_10506158	rs616488	ENSG00000142655.12	PEX14	31271	1.12e-12	-0.233017	5e-20
breast cancer	1_10506158	rs616488	ENSG00000142655.12	PEX14	31271	1.12e-12	-0.233017	4e-18
breast cancer	1_10506158	rs616488	ENSG00000142655.12	PEX14	31271	1.12e-12	-0.233017	9e-09
breast cancer	1_10506158	rs616488	ENSG00000142655.12	PEX14	31271	1.12e-12	-0.233017	1e-08
breast cancer	1_10506158	rs616488	ENSG00000142655.12	PEX14	31271	1.12e-12	-0.233017	2e-10
breast cancer	1_10506158	rs616488	ENSG00000142655.12	PEX14	31271	1.12e-12	-0.233017	4e-11
breast cancer	1_10535965	rs2506889	ENSG00000142655.12	PEX14	61078	9.34e-15	-0.254687	2e-20
breast cancer	1_10536284	rs12375	ENSG00000142655.12	PEX14	61397	9.34e-15	-0.254687	1e-05
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	2.84e-16	0.499816	1e-06
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	2.84e-16	0.499816	1e-06
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	2.84e-16	0.499816	3e-08
breast cancer	1_113903258	rs7513707	ENSG00000226167.1	AP4B1-AS1	46623	1.05e-05	-0.181617	2e-11
breast cancer	1_113905767	rs11552449	ENSG00000226167.1	AP4B1-AS1	49132	6.25e-06	-0.188659	6e-07
breast cancer	1_113905767	rs11552449	ENSG00000226167.1	AP4B1-AS1	49132	6.25e-06	-0.188659	2e-08
breast cancer	1_113905767	rs11552449	ENSG00000226167.1	AP4B1-AS1	49132	6.25e-06	-0.188659	5e-11
breast cancer	1_113905767	rs11552449	ENSG00000226167.1	AP4B1-AS1	49132	6.25e-06	-0.188659	3e-09
breast cancer	1_113905767	rs11552449	ENSG00000226167.1	AP4B1-AS1	49132	6.25e-06	-0.188659	1e-09
breast cancer	1_118488075	rs10923574	ENSG00000231365.5	WARS2-AS1	-652384	6.03e-05	0.201626	4e-07
breast cancer	1_121121848	rs369304377	ENSG00000270231.3	NBPF8	685495	1.37e-25	0.526732	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000270392.2	PFN1P2	687796	4.47e-18	0.484713	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000273136.6	NBPF26	397925	9.93e-17	0.486347	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000171943.11	SRGAP2C	-62962	1.11e-07	-0.149177	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000223345.3	H2BP1	4591	3.06e-06	0.249845	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000213244.3	H3P4	3238	0.000317511	0.225536	2e-29
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.84e-07	0.263408	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	5.35e-11	-0.181469	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.61e-17	0.486285	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.84e-07	0.263408	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	5.35e-11	-0.181469	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.61e-17	0.486285	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.84e-07	0.263408	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	5.35e-11	-0.181469	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.61e-17	0.486285	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.84e-07	0.263408	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	5.35e-11	-0.181469	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.61e-17	0.486285	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.84e-07	0.263408	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	5.35e-11	-0.181469	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.61e-17	0.486285	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.84e-07	0.263408	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	5.35e-11	-0.181469	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.61e-17	0.486285	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.84e-07	0.263408	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	5.35e-11	-0.181469	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.61e-17	0.486285	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.84e-07	0.263408	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	5.35e-11	-0.181469	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.61e-17	0.486285	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.84e-07	0.263408	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	5.35e-11	-0.181469	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.61e-17	0.486285	9e-13
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	4.55e-08	0.273098	2e-07
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	4.55e-08	0.273098	8e-09
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	4.55e-08	0.273098	6e-10
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	4.55e-08	0.273098	5e-09
breast cancer	1_155176305	rs4971059	ENSG00000231064.7	THBS3-AS1	-18699	8.75e-08	0.172403	2e-10
breast cancer	1_155176305	rs4971059	ENSG00000169242.11	EFNA1	48845	5.12e-06	-0.148165	2e-10
breast cancer	1_155176305	rs4971059	ENSG00000160766.14	GBAP1	-51117	2.5e-12	-0.233151	2e-10
breast cancer	1_155176305	rs4971059	ENSG00000225855.6	RUSC1-AS1	-145382	9.44e-05	0.151829	2e-10
breast cancer	1_155176305	rs4971059	ENSG00000169231.13	THBS3	-31676	1.12e-09	0.208597	2e-10
breast cancer	1_155176305	rs4971059	ENSG00000231064.7	THBS3-AS1	-18699	8.75e-08	0.172403	5e-11
breast cancer	1_155176305	rs4971059	ENSG00000169242.11	EFNA1	48845	5.12e-06	-0.148165	5e-11
breast cancer	1_155176305	rs4971059	ENSG00000160766.14	GBAP1	-51117	2.5e-12	-0.233151	5e-11
breast cancer	1_155176305	rs4971059	ENSG00000225855.6	RUSC1-AS1	-145382	9.44e-05	0.151829	5e-11
breast cancer	1_155176305	rs4971059	ENSG00000169231.13	THBS3	-31676	1.12e-09	0.208597	5e-11
breast cancer	1_155212052	rs2974935	ENSG00000231064.7	THBS3-AS1	17048	0.000185611	0.107381	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000160766.14	GBAP1	-15370	1.19e-41	-0.370417	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000225855.6	RUSC1-AS1	-109635	0.000100946	0.133724	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000169231.13	THBS3	4071	4.6e-21	0.277275	2e-07
breast cancer	1_155212373	rs2075570	ENSG00000231064.7	THBS3-AS1	17369	0.000135592	0.109221	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000225855.6	RUSC1-AS1	-109314	0.000132391	0.131034	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000169231.13	THBS3	4392	4.36e-21	0.276487	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000160766.14	GBAP1	-15049	5.04e-41	-0.366802	5e-06
breast cancer	1_155216951	rs1057941	ENSG00000169231.13	THBS3	8970	3.9e-10	0.196255	2e-07
breast cancer	1_155216951	rs1057941	ENSG00000231064.7	THBS3-AS1	21947	0.00011897	0.114548	2e-07
breast cancer	1_155216951	rs1057941	ENSG00000160766.14	GBAP1	-10471	1.6e-21	-0.284223	2e-07
breast cancer	1_155302483	rs7524950	ENSG00000169231.13	THBS3	94502	9.8e-11	0.221227	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000203761.5	MSTO2P	-443346	2.04e-06	-0.179177	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000160766.14	GBAP1	75061	8.87e-14	-0.247606	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000225855.6	RUSC1-AS1	-19204	2.82e-07	0.198637	3e-09
breast cancer	1_155446537	rs10796944	ENSG00000225855.6	RUSC1-AS1	124850	5.23e-08	0.22768	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000169231.13	THBS3	238556	7.13e-05	0.149267	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000203761.5	MSTO2P	-299292	1.23e-08	-0.231481	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000160766.14	GBAP1	219115	7.16e-11	-0.236123	7e-10
breast cancer	1_155587180	rs12091730	ENSG00000132676.15	DAP3	-100780	0.000169166	-0.0803897	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000225855.6	RUSC1-AS1	265493	8.15e-08	0.227126	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000160766.14	GBAP1	359758	4.19e-11	-0.241716	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000203761.5	MSTO2P	-158649	4.13e-09	-0.241462	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000169231.13	THBS3	379199	5.37e-05	0.153539	2e-10
breast cancer	1_155697170	rs348196	ENSG00000160766.14	GBAP1	469748	1.08e-10	-0.226424	2e-08
breast cancer	1_155697170	rs348196	ENSG00000225855.6	RUSC1-AS1	375483	2.06e-06	0.192944	2e-08
breast cancer	1_155697170	rs348196	ENSG00000203761.5	MSTO2P	-48659	2.9e-10	-0.246932	2e-08
breast cancer	1_156183252	rs11264454	ENSG00000196189.12	SEMA4A	35886	1.96e-10	0.191323	7e-07
breast cancer	1_156183252	rs11264454	ENSG00000160785.13	SLC25A44	-10680	5.35e-05	-0.0846516	7e-07
breast cancer	1_156183252	rs11264454	ENSG00000196189.12	SEMA4A	35886	1.96e-10	0.191323	2e-08
breast cancer	1_156183252	rs11264454	ENSG00000160785.13	SLC25A44	-10680	5.35e-05	-0.0846516	2e-08
breast cancer	1_168127440	rs60504827	ENSG00000143158.10	MPC2	190400	8.34e-06	-0.199093	2e-07
breast cancer	1_18480845	rs2992756	ENSG00000179023.8	KLHDC7A	-137	9.42e-22	0.230969	2e-15
breast cancer	1_18480845	rs2992756	ENSG00000179023.8	KLHDC7A	-137	9.42e-22	0.230969	5e-17
breast cancer	1_204546897	rs2290854	ENSG00000198625.12	MDM4	30518	2.56e-05	-0.119219	1e-07
breast cancer	1_207903511	rs2724379	ENSG00000284237.1	LINC02767	-55781	4.19e-15	-0.347184	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000171357.5	LURAP1	-284865	3.64e-08	0.262603	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000086015.20	MAST2	131482	1.29e-06	-0.126077	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000234329.1	RPL7AP16	266643	3.92e-08	0.226057	2e-07
breast cancer	1_46135245	rs1707302	ENSG00000280670.2	CCDC163	635193	3.15e-05	-0.267588	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000086015.20	MAST2	348258	3.29e-10	0.158622	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000234329.1	RPL7AP16	483419	2.04e-05	-0.17254	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000171357.5	LURAP1	-68089	2.78e-17	-0.385357	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000280670.2	CCDC163	635193	3.15e-05	-0.267588	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000086015.20	MAST2	348258	3.29e-10	0.158622	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000234329.1	RPL7AP16	483419	2.04e-05	-0.17254	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000171357.5	LURAP1	-68089	2.78e-17	-0.385357	3e-08
breast cancer	1_8035440	rs225132	ENSG00000116288.12	PARK7	81149	4.26e-09	0.127057	3e-06
breast cancer	1_8326670	rs9628987; rs7535752	ENSG00000162426.14	SLC45A1	8844	1.57e-05	0.196987	5e-06
breast cancer	1_8326670	rs9628987; rs7535752	ENSG00000074800.13	ENO1	-552579	7.71e-05	0.0643962	5e-06
breast cancer	1_91555907	rs12134245	ENSG00000097046.12	CDC7	55014	1.07e-29	-0.316233	4e-06
breast cancer	10_121865675	rs10510102	ENSG00000226864.2	ATE1-AS1	-62637	1.36e-06	0.338405	2e-06
breast cancer	10_121904429	rs7899628	ENSG00000226864.2	ATE1-AS1	-23883	8.29e-19	-0.477156	9e-10
breast cancer	10_27080233	rs7918232	ENSG00000120539.14	MASTL	-75034	3.03e-19	0.459342	8e-06
breast cancer	10_5752689	rs55910451	ENSG00000057608.16	GDI2	-89443	3.7e-17	-0.193363	4e-07
breast cancer	10_92172529	rs72807246	ENSG00000228701.1	TNKS2-DT	374238	2.51e-09	0.533837	3e-06
breast cancer	11_111636465	rs505372	ENSG00000204381.11	LAYN	96185	0.000107262	0.131647	3e-06
breast cancer	11_111765903	rs643506	ENSG00000137713.15	PPP2R1B	-524	1.98e-11	-0.260761	2e-07
breast cancer	11_117214494	rs77683187	ENSG00000160613.12	PCSK7	-18031	2.49e-06	0.188936	2e-06
breast cancer	11_11964514	rs3206824	ENSG00000050165.17	DKK3	-45255	5.84e-09	0.198925	4e-06
breast cancer	11_120362917	rs7924772	ENSG00000181264.8	TLCD5	37788	7.73e-16	0.190202	4e-08
breast cancer	11_18642694	rs10832963	ENSG00000179119.14	SPTY2D1	7903	3.46e-16	-0.229961	9e-06
breast cancer	11_1874478	rs4980386	ENSG00000226416.1	MRPL23-AS1	-115442	2.31e-05	0.230259	9e-17
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.47e-07	-0.310445	1e-10
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.47e-07	-0.310445	2e-11
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.47e-07	-0.310445	1e-18
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.47e-07	-0.310445	3e-09
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.47e-07	-0.310445	6e-21
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.47e-07	-0.310445	2e-13
breast cancer	11_1892909	rs576603	ENSG00000226416.1	MRPL23-AS1	-97011	5.67e-06	0.251885	2e-08
breast cancer	11_47325389	rs11039183	ENSG00000134575.9	ACP2	76483	0.000358307	0.094538	6e-06
breast cancer	11_62126500	rs7937840	ENSG00000149503.12	INCENP	2527	1.49e-06	-0.15334	1e-06
breast cancer	11_62126500	rs7937840	ENSG00000149503.12	INCENP	2527	1.49e-06	-0.15334	2e-09
breast cancer	11_65815595	rs3903072	ENSG00000172757.12	CFL1	-46351	9.57e-06	0.0574705	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	1.01e-11	-0.367752	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	2.63e-11	0.249879	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	3.17e-07	0.103789	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172757.12	CFL1	-46351	9.57e-06	0.0574705	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	1.01e-11	-0.367752	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	2.63e-11	0.249879	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	3.17e-07	0.103789	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172757.12	CFL1	-46351	9.57e-06	0.0574705	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	1.01e-11	-0.367752	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	2.63e-11	0.249879	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	3.17e-07	0.103789	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172757.12	CFL1	-46351	9.57e-06	0.0574705	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	1.01e-11	-0.367752	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	2.63e-11	0.249879	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	3.17e-07	0.103789	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172757.12	CFL1	-46351	9.57e-06	0.0574705	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	1.01e-11	-0.367752	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	2.63e-11	0.249879	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	3.17e-07	0.103789	3e-07
breast cancer	11_65935052	rs617791	ENSG00000175334.7	BANF1	-67125	3.23e-11	0.137519	7e-06
breast cancer	11_65935052	rs617791	ENSG00000172803.17	SNX32	101411	5.43e-06	-0.257037	7e-06
breast cancer	11_65935052	rs617791	ENSG00000175376.8	EIF1AD	-67026	2.81e-06	-0.128189	7e-06
breast cancer	11_65935052	rs617791	ENSG00000172543.7	CTSW	55243	0.000156611	0.148594	7e-06
breast cancer	11_66301747	rs1783730	ENSG00000174684.6	B4GAT1	-45945	3.77e-07	0.116606	3e-07
breast cancer	11_66843174	rs7570	ENSG00000173898.11	SPTBN2	113948	4.89e-10	-0.204565	8e-06
breast cancer	11_66843174	rs7570	ENSG00000174080.10	CTSF	274333	1.44e-09	0.140722	8e-06
breast cancer	11_66843174	rs7570	ENSG00000173621.8	LRFN4	-13473	2.15e-07	-0.129322	8e-06
breast cancer	11_66843174	rs7570	ENSG00000174684.6	B4GAT1	495482	1.98e-06	-0.118717	8e-06
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	1e-42	0.356176	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177697.17	CD151	-29867	2.81e-05	0.134515	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177600.8	RPLP2	-6737	3.69e-10	0.109737	3e-12
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	1.68e-69	0.621028	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177830.17	CHID1	-112041	6.19e-05	-0.0995767	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	1e-42	0.356176	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177697.17	CD151	-29867	2.81e-05	0.134515	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177600.8	RPLP2	-6737	3.69e-10	0.109737	1e-12
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	1.68e-69	0.621028	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177830.17	CHID1	-112041	6.19e-05	-0.0995767	1e-12
breast cancer	12_120997672	rs2464195	ENSG00000157895.11	C12orf43	-18830	8.84e-07	-0.143249	3e-08
breast cancer	14_38968140	rs147032157	ENSG00000150527.16	MIA2	-297144	5.46e-05	-0.131736	4e-06
breast cancer	14_67599772	rs7149859	ENSG00000100564.8	PIGH	-515	2.8e-05	-0.113938	7e-07
breast cancer	14_68283210	rs3784099	ENSG00000198133.8	TMEM229B	749471	0.000226667	0.0956727	3e-07
breast cancer	14_68283210	rs3784099	ENSG00000198133.8	TMEM229B	749471	0.000226667	0.0956727	1e-07
breast cancer	14_92637727	rs11627032	ENSG00000100599.15	RIN3	123953	1.64e-08	-0.192015	4e-11
breast cancer	14_92637727	rs11627032	ENSG00000100599.15	RIN3	123953	1.64e-08	-0.192015	1e-06
breast cancer	14_92637727	rs11627032	ENSG00000100599.15	RIN3	123953	1.64e-08	-0.192015	4e-09
breast cancer	14_92637727	rs11627032	ENSG00000100599.15	RIN3	123953	1.64e-08	-0.192015	2e-06
breast cancer	14_92637727	rs11627032	ENSG00000100599.15	RIN3	123953	1.64e-08	-0.192015	2e-10
breast cancer	15_48608389	rs1876206	ENSG00000156958.14	GALK2	-547273	1.4e-05	0.146537	6e-06
breast cancer	15_49580388	rs8027730	ENSG00000166262.15	FAM227B	-40543	2.54e-07	0.152954	3e-08
breast cancer	15_50402109	rs4774565	ENSG00000244879.6	GABPB1-AS1	46700	1.79e-18	-0.461949	2e-06
breast cancer	15_51321455	rs1004983	ENSG00000186417.13	GLDN	-20174	6.69e-09	-0.210219	3e-06
breast cancer	15_74300521	rs12904134	ENSG00000178718.6	RPP25	-656697	3.37e-05	-0.107089	8e-06
breast cancer	15_74843920	rs6938	ENSG00000178802.17	MPI	-46085	2.82e-09	0.129633	9e-08
breast cancer	15_74843920	rs6938	ENSG00000103653.16	CSK	61863	5.15e-10	-0.149359	9e-08
breast cancer	15_74843920	rs6938	ENSG00000140474.12	ULK3	723	1.94e-07	-0.123377	9e-08
breast cancer	15_74843920	rs6938	ENSG00000178718.6	RPP25	-113298	4.99e-16	-0.208615	9e-08
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	1.44e-13	-0.172358	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	4.63e-12	0.149657	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000178718.6	RPP25	-102227	2.45e-15	-0.203666	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000103653.16	CSK	72934	4.53e-10	-0.149621	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	1.44e-13	-0.172358	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	4.63e-12	0.149657	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000178718.6	RPP25	-102227	2.45e-15	-0.203666	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000103653.16	CSK	72934	4.53e-10	-0.149621	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	1.44e-13	-0.172358	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	4.63e-12	0.149657	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000178718.6	RPP25	-102227	2.45e-15	-0.203666	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000103653.16	CSK	72934	4.53e-10	-0.149621	4e-07
breast cancer	15_75516399	rs8027365	ENSG00000140400.16	MAN2C1	148245	4.63e-79	0.710517	1e-07
breast cancer	15_75516399	rs8027365	ENSG00000169371.13	SNUPN	-110070	1.92e-12	0.170397	1e-07
breast cancer	15_77977130	rs12906542	ENSG00000261143.1	ADAMTS7P3	1088	2.63e-14	0.265534	7e-07
breast cancer	15_79777420	rs166870	ENSG00000136371.10	MTHFS	-119959	1.14e-06	-0.168901	3e-07
breast cancer	15_90965985	rs77554484	ENSG00000166965.12	RCCD1	10189	9.94e-17	0.296259	1e-15
breast cancer	15_90965985	rs77554484	ENSG00000258725.1	PRC1-AS1	-6875	3.31e-14	-0.58628	1e-15
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	2.22e-11	-0.419207	2e-19
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	2.22e-11	-0.419207	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	2.22e-11	-0.419207	4e-08
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	1.38e-31	-0.368477	4e-08
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	1.38e-31	-0.368477	3e-10
breast cancer	16_56497273	rs2303282	ENSG00000125124.11	BBS2	-23010	2.42e-35	-0.400411	3e-07
breast cancer	16_71475893	rs8050871	ENSG00000167377.17	ZNF23	12798	1.61e-22	-0.304133	3e-06
breast cancer	16_71475893	rs8050871	ENSG00000040199.18	PHLPP2	-248808	2.29e-10	-0.175454	3e-06
breast cancer	17_2195889	rs16952006	ENSG00000167720.12	SRR	-107494	1.19e-11	-0.422791	3e-06
breast cancer	17_30689342	rs8081187	ENSG00000176390.11	CRLF3	-135434	0.00011972	0.195711	2e-07
breast cancer	17_30884649	rs7223535	ENSG00000176390.11	CRLF3	59873	2.43e-05	0.130514	4e-10
breast cancer	17_30884649	rs7223535	ENSG00000264538.6	SUZ12P1	175350	1.25e-05	0.145035	4e-10
breast cancer	17_30887862	rs113934718	ENSG00000264538.6	SUZ12P1	178563	1.22e-05	0.146872	1e-08
breast cancer	17_30887862	rs113934718	ENSG00000176390.11	CRLF3	63086	1.52e-05	0.135208	1e-08
breast cancer	17_30894259	rs62070652	ENSG00000176390.11	CRLF3	69483	1.52e-05	0.135208	1e-06
breast cancer	17_30894259	rs62070652	ENSG00000264538.6	SUZ12P1	184960	1.22e-05	0.146872	1e-06
breast cancer	17_30894259	rs62070652	ENSG00000176390.11	CRLF3	69483	1.52e-05	0.135208	6e-09
breast cancer	17_30894259	rs62070652	ENSG00000264538.6	SUZ12P1	184960	1.22e-05	0.146872	6e-09
breast cancer	17_45394123	rs4763	ENSG00000264070.1	DND1P1	-191748	2.96e-54	1.17823	2e-08
breast cancer	17_45394123	rs4763	ENSG00000225190.10	PLEKHM1	-96626	1.7e-12	0.254911	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214401.4	KANSL1-AS1	-799453	2.24e-57	1.12162	2e-08
breast cancer	17_45394123	rs4763	ENSG00000263503.1	MAPK8IP1P2	-208217	4.48e-55	1.08376	2e-08
breast cancer	17_45394123	rs4763	ENSG00000204650.14	LINC02210	-226205	6.83e-81	1.10582	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214425.7	LRRC37A4P	-156212	1.19e-68	-1.0608	2e-08
breast cancer	17_45394123	rs4763	ENSG00000186868.15	MAPT	-500259	1.19e-19	0.516871	2e-08
breast cancer	17_45394123	rs4763	ENSG00000176681.14	LRRC37A	-898610	3.81e-13	0.510848	2e-08
breast cancer	17_45394123	rs4763	ENSG00000262500.1	MAPK8IP1P1	-849483	2.07e-53	1.02034	2e-08
breast cancer	17_45941122	rs62061734	ENSG00000214425.7	LRRC37A4P	390787	1.15e-123	-1.15978	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000263503.1	MAPK8IP1P2	338782	4.52e-79	1.12695	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000108379.9	WNT3	-891936	9.02e-15	0.325207	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000186868.15	MAPT	46740	1.68e-29	0.572183	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000238083.7	LRRC37A2	-570389	8.99e-74	0.920043	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000262500.1	MAPK8IP1P1	-302484	5.79e-82	1.08666	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000204650.14	LINC02210	320794	1.98e-140	1.17817	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000225190.10	PLEKHM1	450373	2.28e-06	0.158149	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000176681.14	LRRC37A	-351611	3.32e-17	0.53579	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000232300.1	FAM215B	-621673	4.02e-10	0.459823	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000120071.13	KANSL1	-284267	0.000101442	0.238156	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000264070.1	DND1P1	355251	8.81e-71	1.18633	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214401.4	KANSL1-AS1	-252454	8.5e-93	1.2087	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000185829.17	ARL17A	-638560	5.45e-12	0.487731	8e-12
breast cancer	17_46751565	rs199533	ENSG00000176681.14	LRRC37A	458832	9.61e-15	0.497315	5e-08
breast cancer	17_46751565	rs199533	ENSG00000108379.9	WNT3	-81493	2.09e-16	0.344929	5e-08
breast cancer	17_46751565	rs199533	ENSG00000120071.13	KANSL1	526176	1.34e-08	0.346367	5e-08
breast cancer	17_46751565	rs199533	ENSG00000214401.4	KANSL1-AS1	557989	4.84e-114	1.28901	5e-08
breast cancer	17_46751565	rs199533	ENSG00000232300.1	FAM215B	188770	2.46e-11	0.49173	5e-08
breast cancer	17_46751565	rs199533	ENSG00000238083.7	LRRC37A2	240054	1.87e-71	0.91421	5e-08
breast cancer	17_46751565	rs199533	ENSG00000262500.1	MAPK8IP1P1	507959	3.53e-102	1.16907	5e-08
breast cancer	17_46751565	rs199533	ENSG00000186868.15	MAPT	857183	3.08e-26	0.544518	5e-08
breast cancer	17_46751565	rs199533	ENSG00000185829.17	ARL17A	171883	3.21e-14	0.536562	5e-08
breast cancer	17_46788237	rs199498	ENSG00000176681.14	LRRC37A	495504	1.86e-13	0.455669	2e-08
breast cancer	17_46788237	rs199498	ENSG00000238083.7	LRRC37A2	276726	7.03e-43	0.721412	2e-08
breast cancer	17_46788237	rs199498	ENSG00000186868.15	MAPT	893855	9.92e-20	0.456234	2e-08
breast cancer	17_46788237	rs199498	ENSG00000185829.17	ARL17A	208555	1.5e-10	0.43929	2e-08
breast cancer	17_46788237	rs199498	ENSG00000214401.4	KANSL1-AS1	594661	1.36e-61	1.01491	2e-08
breast cancer	17_46788237	rs199498	ENSG00000262500.1	MAPK8IP1P1	544631	2.92e-59	0.93559	2e-08
breast cancer	17_46788237	rs199498	ENSG00000232300.1	FAM215B	225442	4.63e-06	0.328614	2e-08
breast cancer	17_46788237	rs199498	ENSG00000108379.9	WNT3	-44821	2.88e-18	0.350064	2e-08
breast cancer	17_50196930	rs2075555	ENSG00000108823.15	SGCA	30945	4.67e-11	-0.323776	8e-08
breast cancer	17_50196930	rs2075555	ENSG00000188662.6	H1-9P	15752	2.92e-05	-0.251923	8e-08
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	6.75e-06	-0.102712	8e-09
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	2.33e-37	-0.385376	8e-09
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	6.75e-06	-0.102712	1e-08
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	2.33e-37	-0.385376	1e-08
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	6.75e-06	-0.102712	5e-12
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	2.33e-37	-0.385376	5e-12
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	6.75e-06	-0.102712	2e-13
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	2.33e-37	-0.385376	2e-13
breast cancer	17_55132413	rs2787486	ENSG00000166263.13	STXBP4	163627	8.72e-26	-0.319753	2e-34
breast cancer	17_55132413	rs2787486	ENSG00000166263.13	STXBP4	163627	8.72e-26	-0.319753	6e-29
breast cancer	17_55135212	rs2628317	ENSG00000166263.13	STXBP4	166426	1.6e-25	-0.3457	4e-16
breast cancer	17_55135212	rs2628317	ENSG00000141198.14	TOM1L1	235825	1.99e-05	-0.103898	4e-16
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	3.38e-37	-0.560298	5e-07
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	3.38e-37	-0.560298	4e-10
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	3.38e-37	-0.560298	6e-06
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	3.38e-37	-0.560298	1e-09
breast cancer	17_81211408	rs9913021	ENSG00000141577.13	CEP131	-11591	2.77e-07	-0.121365	2e-06
breast cancer	17_82597601	rs62079673	ENSG00000141580.15	WDR45B	-50952	8.69e-13	0.223594	1e-06
breast cancer	17_82946434	rs898097	ENSG00000141560.14	FN3KRP	229751	6.88e-17	-0.338552	2e-06
breast cancer	19_12846836	rs117758012	ENSG00000132004.12	FBXW9	150193	0.000106329	0.17487	5e-07
breast cancer	19_17278895	rs8170	ENSG00000130300.8	PLVAP	-98455	3.85e-05	-0.189884	1e-12
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	4.04e-08	0.193055	1e-12
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	1.44e-07	0.158883	1e-12
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.8e-15	-0.179066	1e-12
breast cancer	19_17278895	rs8170	ENSG00000105393.15	BABAM1	11545	2.69e-12	-0.192682	1e-12
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.24e-05	0.205838	1e-12
breast cancer	19_17278895	rs8170	ENSG00000130300.8	PLVAP	-98455	3.85e-05	-0.189884	9e-13
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	4.04e-08	0.193055	9e-13
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	1.44e-07	0.158883	9e-13
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.8e-15	-0.179066	9e-13
breast cancer	19_17278895	rs8170	ENSG00000105393.15	BABAM1	11545	2.69e-12	-0.192682	9e-13
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.24e-05	0.205838	9e-13
breast cancer	19_17278895	rs8170	ENSG00000130300.8	PLVAP	-98455	3.85e-05	-0.189884	7e-21
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	4.04e-08	0.193055	7e-21
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	1.44e-07	0.158883	7e-21
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.8e-15	-0.179066	7e-21
breast cancer	19_17278895	rs8170	ENSG00000105393.15	BABAM1	11545	2.69e-12	-0.192682	7e-21
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.24e-05	0.205838	7e-21
breast cancer	19_17278895	rs8170	ENSG00000130300.8	PLVAP	-98455	3.85e-05	-0.189884	4e-13
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	4.04e-08	0.193055	4e-13
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	1.44e-07	0.158883	4e-13
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.8e-15	-0.179066	4e-13
breast cancer	19_17278895	rs8170	ENSG00000105393.15	BABAM1	11545	2.69e-12	-0.192682	4e-13
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.24e-05	0.205838	4e-13
breast cancer	19_17278895	rs8170	ENSG00000130300.8	PLVAP	-98455	3.85e-05	-0.189884	2e-09
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	4.04e-08	0.193055	2e-09
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	1.44e-07	0.158883	2e-09
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.8e-15	-0.179066	2e-09
breast cancer	19_17278895	rs8170	ENSG00000105393.15	BABAM1	11545	2.69e-12	-0.192682	2e-09
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.24e-05	0.205838	2e-09
breast cancer	19_17278895	rs8170	ENSG00000130300.8	PLVAP	-98455	3.85e-05	-0.189884	2e-06
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	4.04e-08	0.193055	2e-06
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	1.44e-07	0.158883	2e-06
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.8e-15	-0.179066	2e-06
breast cancer	19_17278895	rs8170	ENSG00000105393.15	BABAM1	11545	2.69e-12	-0.192682	2e-06
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.24e-05	0.205838	2e-06
breast cancer	19_17279482	rs4808075	ENSG00000127220.5	ABHD8	-30754	1.98e-05	0.115166	4e-07
breast cancer	19_17279482	rs4808075	ENSG00000127220.5	ABHD8	-30754	1.98e-05	0.115166	2e-09
breast cancer	19_17282085	rs8100241	ENSG00000130312.6	MRPL34	-10747	7.15e-05	0.0751128	4e-08
breast cancer	19_17283116	rs56069439	ENSG00000127220.5	ABHD8	-27120	1e-05	0.119222	8e-19
breast cancer	19_17283116	rs56069439	ENSG00000127220.5	ABHD8	-27120	1e-05	0.119222	9e-09
breast cancer	19_17283116	rs56069439	ENSG00000127220.5	ABHD8	-27120	1e-05	0.119222	1e-32
breast cancer	19_17283315	rs2363956	ENSG00000130312.6	MRPL34	-9517	2.91e-05	0.0793865	2e-06
breast cancer	19_17283315	rs2363956	ENSG00000130312.6	MRPL34	-9517	2.91e-05	0.0793865	2e-08
breast cancer	19_17290595	rs67397200	ENSG00000127220.5	ABHD8	-19641	3.93e-06	0.123902	3e-37
breast cancer	19_17290595	rs67397200	ENSG00000127220.5	ABHD8	-19641	3.93e-06	0.123902	3e-17
breast cancer	19_17290595	rs67397200	ENSG00000127220.5	ABHD8	-19641	3.93e-06	0.123902	2e-08
breast cancer	19_18422832	rs7258465	ENSG00000130511.15	SSBP4	3968	3.96e-05	-0.0761305	3e-28
breast cancer	19_18422832	rs7258465	ENSG00000105656.12	ELL	-99295	1.27e-05	0.0874343	3e-28
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	6.86e-06	0.0899144	5e-28
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	1.84e-05	-0.0791668	5e-28
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	6.86e-06	0.0899144	6e-14
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	1.84e-05	-0.0791668	6e-14
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	6.86e-06	0.0899144	5e-15
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	1.84e-05	-0.0791668	5e-15
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	6.86e-06	0.0899144	4e-15
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	1.84e-05	-0.0791668	4e-15
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	6.86e-06	0.0899144	6e-06
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	1.84e-05	-0.0791668	6e-06
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	6.86e-06	0.0899144	2e-31
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	1.84e-05	-0.0791668	2e-31
breast cancer	19_18522945	rs172032	ENSG00000105656.12	ELL	818	2.71e-10	0.118088	1e-16
breast cancer	19_19417997	rs1469713	ENSG00000064547.13	LPAR2	-210933	4.73e-06	-0.133289	1e-10
breast cancer	19_19417997	rs1469713	ENSG00000250067.11	YJEFN3	-111367	4.23e-05	-0.1195	1e-10
breast cancer	19_19417997	rs1469713	ENSG00000213996.12	TM6SF2	144606	1.82e-12	-0.305575	1e-10
breast cancer	19_19434887	rs2965183	ENSG00000064547.13	LPAR2	-194043	4.73e-06	-0.133289	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000250067.11	YJEFN3	-94477	4.23e-05	-0.1195	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000213996.12	TM6SF2	161496	1.82e-12	-0.305575	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000064547.13	LPAR2	-194043	4.73e-06	-0.133289	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000250067.11	YJEFN3	-94477	4.23e-05	-0.1195	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000213996.12	TM6SF2	161496	1.82e-12	-0.305575	1e-11
breast cancer	19_19535463	rs2304098	ENSG00000250067.11	YJEFN3	6099	0.000109576	-0.113206	2e-11
breast cancer	19_19535463	rs2304098	ENSG00000213996.12	TM6SF2	262072	1.45e-12	-0.307402	2e-11
breast cancer	19_19535463	rs2304098	ENSG00000064547.13	LPAR2	-93467	9.46e-06	-0.129326	2e-11
breast cancer	19_2226677	rs3815308	ENSG00000065000.15	AP3D1	62212	3.57e-05	0.0738085	7e-06
breast cancer	19_43779080	rs1685191	ENSG00000176222.8	ZNF404	-104971	1.81e-12	-0.203378	4e-20
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.01e-18	-0.246967	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	4.54e-06	0.189668	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.01e-18	-0.246967	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	4.54e-06	0.189668	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.01e-18	-0.246967	2e-14
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	4.54e-06	0.189668	2e-14
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.01e-18	-0.246967	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	4.54e-06	0.189668	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.01e-18	-0.246967	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	4.54e-06	0.189668	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.01e-18	-0.246967	1e-16
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	4.54e-06	0.189668	1e-16
breast cancer	19_43919418	rs375066	ENSG00000176222.8	ZNF404	35367	6.27e-27	-0.301103	2e-14
breast cancer	19_51869723	rs10411161	ENSG00000161551.14	ZNF577	-18253	7.33e-06	-0.150762	7e-06
breast cancer	19_51869723	rs10411161	ENSG00000198093.10	ZNF649	-35317	2.82e-05	-0.217145	7e-06
breast cancer	19_51942133	rs8113308	ENSG00000269235.1	ZNF350-AS1	-7001	1.11e-17	0.584621	6e-07
breast cancer	2_201003582	rs112257290	ENSG00000064012.21	CASP8	-229861	1.5e-05	-0.324274	2e-07
breast cancer	2_201258707	rs3769821	ENSG00000155749.12	FLACC1	-98691	1.12e-14	-0.25054	4e-18
breast cancer	2_201258707	rs3769821	ENSG00000064012.21	CASP8	25264	8.93e-41	0.434676	4e-18
breast cancer	2_201279205	rs10931936	ENSG00000155749.12	FLACC1	-78193	3.84e-18	-0.301005	6e-06
breast cancer	2_201279205	rs10931936	ENSG00000064012.21	CASP8	45762	3.85e-34	0.433866	6e-06
breast cancer	2_201288355	rs1035142	ENSG00000155749.12	FLACC1	-69043	1.16e-20	-0.296427	3e-09
breast cancer	2_201288355	rs1035142	ENSG00000064012.21	CASP8	54912	1.54e-72	0.541139	3e-09
breast cancer	2_201288502	rs700635	ENSG00000064012.21	CASP8	55059	3.85e-34	0.433866	5e-16
breast cancer	2_201288502	rs700635	ENSG00000155749.12	FLACC1	-68896	3.84e-18	-0.301005	5e-16
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	5.59e-33	0.42764	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	2.46e-18	-0.302901	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	5.59e-33	0.42764	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	2.46e-18	-0.302901	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	5.59e-33	0.42764	6e-24
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	2.46e-18	-0.302901	6e-24
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	5.59e-33	0.42764	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	2.46e-18	-0.302901	9e-14
breast cancer	2_201384985	rs2714486	ENSG00000064012.21	CASP8	151542	9.9e-18	-0.374114	7e-10
breast cancer	2_201384985	rs2714486	ENSG00000155749.12	FLACC1	27587	2.52e-11	0.27678	7e-10
breast cancer	2_201502866	rs77688320	ENSG00000064012.21	CASP8	269423	3.58e-14	-0.354213	3e-09
breast cancer	2_201502866	rs77688320	ENSG00000155749.12	FLACC1	145468	1.23e-09	0.268895	3e-09
breast cancer	2_226474745	rs13008686	ENSG00000169047.5	IRS1	-325014	5.31e-06	0.154625	7e-06
breast cancer	2_24748307	rs6710503	ENSG00000084676.15	NCOA1	256393	2.14e-05	0.124734	5e-06
breast cancer	2_24906604	rs6725517	ENSG00000138031.14	ADCY3	-13235	5.28e-07	0.182783	3e-12
breast cancer	2_24906604	rs6725517	ENSG00000138092.10	CENPO	113221	2.06e-10	0.236117	3e-12
breast cancer	2_24906604	rs6725517	ENSG00000138031.14	ADCY3	-13235	5.28e-07	0.182783	5e-11
breast cancer	2_24906604	rs6725517	ENSG00000138092.10	CENPO	113221	2.06e-10	0.236117	5e-11
breast cancer	2_25068670	rs1971136	ENSG00000138092.10	CENPO	275287	1.89e-08	-0.212158	5e-09
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	1.86e-09	0.21773	5e-09
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	1.86e-09	0.21773	3e-06
breast cancer	2_28897867	rs4577244	ENSG00000171103.10	TRMT61B	27566	5.03e-09	0.210781	2e-09
breast cancer	2_41931164	rs17029056	ENSG00000205086.6	LINC02898	-23102	4.44e-24	-0.518567	4e-06
breast cancer	2_41931164	rs17029056	ENSG00000234362.5	LINC01914	-2559	2.17e-08	-0.345821	4e-06
breast cancer	20_19772894	rs4814894	ENSG00000236992.2	RPL12P12	-51049	7.36e-06	0.238687	7e-07
breast cancer	20_39051206	rs742276	ENSG00000101452.14	DHX35	88907	4.57e-09	-0.20502	9e-06
breast cancer	20_39051206	rs742276	ENSG00000101447.14	FAM83D	124894	7.38e-11	-0.332583	9e-06
breast cancer	20_50346469	rs6020465	ENSG00000233077.1	LINC01271	25127	7.95e-05	-0.232561	5e-07
breast cancer	21_46360308	rs9808759	ENSG00000160285.14	LSS	131484	7.26e-05	0.191823	6e-09
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	2.84e-25	-0.8569	6e-09
breast cancer	21_46360308	rs9808759	ENSG00000160284.14	SPATC1L	175832	1.43e-06	-0.42534	6e-09
breast cancer	21_46360308	rs9808759	ENSG00000160285.14	LSS	131484	7.26e-05	0.191823	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	2.84e-25	-0.8569	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000160284.14	SPATC1L	175832	1.43e-06	-0.42534	4e-07
breast cancer	22_29273659	rs4820803	ENSG00000100263.13	RHBDD3	5681	5.71e-08	0.146654	2e-06
breast cancer	22_30027471	rs12537	ENSG00000184117.11	NIPSNAP1	446134	2.3e-06	-0.0895053	9e-07
breast cancer	22_38172826	rs738321	ENSG00000184381.18	PLA2G6	-32864	4.55e-08	0.12716	7e-14
breast cancer	22_38172826	rs738321	ENSG00000184381.18	PLA2G6	-32864	4.55e-08	0.12716	1e-13
breast cancer	22_38174306	rs4820318	ENSG00000184381.18	PLA2G6	-31384	3.95e-08	0.127398	1e-13
breast cancer	22_38962032	rs12628403	ENSG00000128383.12	APOBEC3A	9291	1.89e-24	-0.606316	9e-14
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	3.03e-28	-0.808639	9e-14
breast cancer	22_38962032	rs12628403	ENSG00000128383.12	APOBEC3A	9291	1.89e-24	-0.606316	3e-17
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	3.03e-28	-0.808639	3e-17
breast cancer	22_38962032	rs12628403	ENSG00000128383.12	APOBEC3A	9291	1.89e-24	-0.606316	4e-06
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	3.03e-28	-0.808639	4e-06
breast cancer	22_41221553	rs140614180	ENSG00000232564.3	MRTFA-AS1	699753	8.53e-05	-0.723814	6e-08
breast cancer	22_41501983	rs117078955	ENSG00000232564.3	MRTFA-AS1	980183	0.000161913	-0.726363	1e-06
breast cancer	22_42745087	rs4820477	ENSG00000128274.15	A4GALT	23789	8.78e-18	-0.225347	9e-07
breast cancer	3_156927968	rs7637701	ENSG00000240875.5	LINC00886	110906	6.27e-09	-0.209438	1e-06
breast cancer	3_156927968	rs7637701	ENSG00000197980.12	LEKR1	102487	0.000123265	0.1433	1e-06
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	1.93e-06	0.386999	7e-16
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	1.93e-06	0.386999	8e-07
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	1.93e-06	0.386999	2e-08
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	1.93e-06	0.386999	6e-15
breast cancer	3_46846708	rs56387622	ENSG00000188086.13	PRSS45P	101953	1.32e-05	0.341494	5e-19
breast cancer	3_47364189	rs146331761	ENSG00000229759.1	MRPS18AP1	-892397	0.000221437	0.507326	5e-07
breast cancer	4_103450498	rs10016947	ENSG00000164039.14	BDH2	350615	2.87e-05	0.282135	9e-06
breast cancer	4_38814717	rs6815814	ENSG00000197712.11	FAM114A1	-52960	2.49e-07	0.144439	1e-11
breast cancer	4_38814717	rs6815814	ENSG00000197712.11	FAM114A1	-52960	2.49e-07	0.144439	6e-13
breast cancer	4_57013626	rs4865169	ENSG00000047315.15	POLR2B	34802	6.77e-05	-0.0873811	7e-06
breast cancer	5_10467590	rs1092913	ENSG00000164237.8	CMBL	159564	1.46e-05	0.182069	2e-06
breast cancer	5_128098106	rs1112956	ENSG00000245937.7	SLC12A2-DT	14934	1.97e-32	0.387207	9e-06
breast cancer	5_128227188	rs36715	ENSG00000245937.7	SLC12A2-DT	144016	1.37e-13	0.226767	4e-06
breast cancer	5_132304843	rs6860806	ENSG00000197375.12	SLC22A5	-64909	4.33e-16	-0.333335	8e-08
breast cancer	5_132304843	rs6860806	ENSG00000197375.12	SLC22A5	-64909	4.33e-16	-0.333335	3e-08
breast cancer	5_132466255	rs2522057	ENSG00000197375.12	SLC22A5	96503	2.34e-16	0.345774	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000197375.12	SLC22A5	96503	2.34e-16	0.345774	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000197375.12	SLC22A5	96503	2.34e-16	0.345774	3e-07
breast cancer	5_132497907	rs736801	ENSG00000197375.12	SLC22A5	128155	1.39e-10	-0.278775	8e-08
breast cancer	5_1453229	rs2617583	ENSG00000142319.17	SLC6A3	7799	1.68e-32	-0.657917	9e-07
breast cancer	5_154976135	rs6890610	ENSG00000155508.13	CNOT8	118582	1.16e-12	-0.229809	6e-06
breast cancer	5_43410515	rs73098691	ENSG00000151881.14	TMEM267	-73378	3.2e-05	0.181543	3e-06
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	1.36e-11	0.372593	7e-20
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	1.36e-11	0.372593	1e-39
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	1.36e-11	0.372593	5e-09
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	1.36e-11	0.372593	3e-27
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	1.36e-11	0.372593	1e-08
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	1.36e-11	0.372593	3e-36
breast cancer	5_56737113	rs1862626	ENSG00000155542.11	SETD9	-172147	2.2e-11	0.365414	4e-12
breast cancer	5_56926293	rs11957276	ENSG00000155542.11	SETD9	17033	4.14e-07	0.304463	5e-11
breast cancer	5_56977866	rs10036895	ENSG00000155542.11	SETD9	68606	4.13e-28	0.555609	2e-12
breast cancer	5_81972251	rs111549985	ENSG00000152348.15	ATG10	226	2.3e-43	0.749362	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000205464.11	ATP6AP1L	-307211	3.16e-43	0.767833	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000186468.12	RPS23	-306326	2.53e-45	-0.431264	6e-12
breast cancer	5_82161539	rs2407064	ENSG00000186468.12	RPS23	-117038	1.02e-43	0.420189	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000205464.11	ATP6AP1L	-117923	8.91e-46	-0.777615	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000152348.15	ATG10	189514	1.92e-39	-0.712007	3e-08
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	6.13e-37	-0.695331	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.19e-45	-0.780315	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	3.93e-48	0.439131	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	6.13e-37	-0.695331	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.19e-45	-0.780315	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	3.93e-48	0.439131	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	6.13e-37	-0.695331	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.19e-45	-0.780315	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	3.93e-48	0.439131	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	6.13e-37	-0.695331	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.19e-45	-0.780315	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	3.93e-48	0.439131	4e-09
breast cancer	5_82340549	rs2407156	ENSG00000152348.15	ATG10	368524	2.09e-22	0.532642	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000205464.11	ATP6AP1L	61087	4.06e-38	0.697127	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000186468.12	RPS23	61972	6.28e-35	-0.36957	2e-06
breast cancer	6_122394099	rs74392007	ENSG00000025156.12	HSF2	-5447	3.6e-12	-0.29761	3e-07
breast cancer	6_122554525	rs76092474	ENSG00000025156.12	HSF2	154979	1.52e-11	-0.291532	3e-06
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.45e-56	-0.598904	2e-12
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.45e-56	-0.598904	3e-12
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.45e-56	-0.598904	4e-08
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.45e-56	-0.598904	8e-10
breast cancer	6_25710343	rs68006638	ENSG00000186470.13	BTN3A2	-654816	2.85e-29	-1.04743	2e-07
breast cancer	6_25874195	rs13198474	ENSG00000186470.13	BTN3A2	-490964	2.65e-29	-1.05941	2e-07
breast cancer	6_26175638	rs17598658	ENSG00000186470.13	BTN3A2	-189521	6.71e-45	-1.14595	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000186470.13	BTN3A2	98187	4.82e-62	-1.21378	2e-09
breast cancer	6_26993501	rs34546498	ENSG00000186470.13	BTN3A2	628342	4.8e-60	-1.22173	9e-10
breast cancer	6_27307055	rs56114371	ENSG00000219392.1	ZNF602P	-808573	8.14e-06	-0.498673	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000186470.13	BTN3A2	941896	6.58e-59	-1.20031	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000197062.11	ZSCAN26	-959955	7.08e-07	-0.181705	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000216901.1	ZNF603P	-869133	5.9e-05	0.44252	2e-09
breast cancer	6_27457865	rs34196306	ENSG00000235109.7	ZSCAN31	-898406	0.000323718	0.28254	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000216901.1	ZNF603P	-718323	9.16e-05	0.444912	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000219392.1	ZNF602P	-657763	1.05e-06	-0.561813	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000197062.11	ZSCAN26	-809145	3.57e-07	-0.192331	1e-09
breast cancer	6_27873148	rs45509595	ENSG00000197062.11	ZSCAN26	-393862	1.89e-07	-0.193398	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000219392.1	ZNF602P	-242480	1.02e-07	-0.600822	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000216901.1	ZNF603P	-303040	3.19e-05	0.464616	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000235109.7	ZSCAN31	-483123	0.000150255	0.292636	5e-09
breast cancer	6_28106103	rs34662244	ENSG00000216901.1	ZNF603P	-70085	3.21e-05	0.45637	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000197062.11	ZSCAN26	-160907	4.34e-07	-0.184492	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000219392.1	ZNF602P	-9525	9.44e-08	-0.591881	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000235109.7	ZSCAN31	-250168	5.6e-05	0.305299	3e-09
breast cancer	6_28364364	rs13214023	ENSG00000216901.1	ZNF603P	188176	7.82e-05	0.436891	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000219392.1	ZNF602P	248736	3.91e-07	-0.567284	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000235109.7	ZSCAN31	8093	2.63e-05	0.320412	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000197062.11	ZSCAN26	97354	5.61e-07	-0.183979	1e-09
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	1.57e-06	0.268362	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	7.23e-15	0.209895	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	0.000383007	0.10573	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	1.57e-06	0.268362	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	7.23e-15	0.209895	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	0.000383007	0.10573	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	1.57e-06	0.268362	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	7.23e-15	0.209895	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	0.000383007	0.10573	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	1.57e-06	0.268362	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	7.23e-15	0.209895	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	0.000383007	0.10573	5e-08
breast cancer	6_29280372	rs3130834	ENSG00000066379.14	POLR1H	-781269	0.000178755	-0.250336	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000235109.7	ZSCAN31	924101	5.83e-05	0.302521	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000230795.3	HLA-K	-646806	6.1e-08	-0.597493	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000281831.1	HCP5B	-593411	4.06e-16	0.892222	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000204632.11	HLA-G	-546595	7.06e-08	-0.549072	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000181126.13	HLA-V	-510582	3.4e-06	-0.419916	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000176998.4	HCG4	-512064	1.01e-05	-0.532592	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000239257.1	RPL23AP1	-446510	1.78e-05	0.387076	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000204616.10	TRIM31	-832734	1.57e-07	-0.473494	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000231130.1	HLA-T	-616282	2.4e-05	-0.544021	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000204622.11	HLA-J	-725599	3.3e-06	-0.436611	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000204644.9	ZFP57	-400738	5.44e-15	0.964372	5e-09
breast cancer	6_29388554	rs9257809	ENSG00000239257.1	RPL23AP1	-338328	7.24e-05	0.351091	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000231130.1	HLA-T	-508100	5.89e-06	-0.570592	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204644.9	ZFP57	-292556	8.12e-17	1.00185	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204622.11	HLA-J	-617417	8.08e-08	-0.49125	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000176998.4	HCG4	-403882	2.25e-06	-0.557841	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204632.11	HLA-G	-438413	1.2e-07	-0.528423	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000281831.1	HCP5B	-485229	3.09e-18	0.930203	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000181126.13	HLA-V	-402400	6.15e-07	-0.440642	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000230795.3	HLA-K	-538624	8.23e-10	-0.660344	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204616.10	TRIM31	-724552	1.07e-06	-0.432233	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000066379.14	POLR1H	-673087	7.23e-05	-0.259383	3e-08
breast cancer	6_29509637	rs1233480	ENSG00000281831.1	HCP5B	-364146	1.1e-13	0.677546	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000204616.10	TRIM31	-603469	1.07e-05	-0.330123	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000230795.3	HLA-K	-417541	0.000219862	-0.339987	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000239257.1	RPL23AP1	-217245	7.11e-05	0.296714	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000235821.1	IFITM4P	-241511	5.14e-05	-0.285875	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000204622.11	HLA-J	-496334	2.32e-08	-0.431228	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000204644.9	ZFP57	-171473	1.89e-08	0.582822	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000204632.11	HLA-G	-317330	4.6e-08	-0.460176	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000231130.1	HLA-T	-387017	5.86e-05	-0.428325	5e-08
breast cancer	6_29693039	rs3116813	ENSG00000231130.1	HLA-T	-203615	1.18e-06	-0.610397	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000281831.1	HCP5B	-180744	1.02e-20	0.99005	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000146112.11	PPP1R18	-994856	8.54e-06	-0.179248	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000230795.3	HLA-K	-234139	1.19e-11	-0.725203	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204616.10	TRIM31	-420067	8.28e-08	-0.47329	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000235821.1	IFITM4P	-58109	0.000264284	-0.305325	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000181126.13	HLA-V	-97915	7.97e-07	-0.435895	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204644.9	ZFP57	11929	1.49e-17	1.02285	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204622.11	HLA-J	-312932	2.05e-08	-0.512186	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000066379.14	POLR1H	-368602	4.45e-05	-0.266465	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000239257.1	RPL23AP1	-33843	6.28e-06	0.398205	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000176998.4	HCG4	-99397	1.49e-06	-0.566794	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204632.11	HLA-G	-133928	6.21e-09	-0.577689	6e-07
breast cancer	6_29785031	rs147680653	ENSG00000204616.10	TRIM31	-328075	9.22e-08	-0.468972	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000204632.11	HLA-G	-41936	9.14e-09	-0.56826	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000230795.3	HLA-K	-142147	6.86e-12	-0.729166	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000204644.9	ZFP57	103921	4.65e-18	1.03179	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000137312.14	FLOT1	-957702	1.23e-14	0.288249	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000146112.11	PPP1R18	-902864	2.84e-06	-0.187262	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000181126.13	HLA-V	-5923	3e-07	-0.449399	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000231130.1	HLA-T	-111623	2.68e-07	-0.641582	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000204622.11	HLA-J	-220940	6e-09	-0.527623	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000066379.14	POLR1H	-276610	6.98e-05	-0.258211	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000176998.4	HCG4	-7405	5.19e-07	-0.587208	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000281831.1	HCP5B	-88752	1.14e-21	1.00622	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000235821.1	IFITM4P	33883	0.000316423	-0.29979	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000239257.1	RPL23AP1	58149	3.78e-06	0.405076	1e-06
breast cancer	6_29882943	rs1611579	ENSG00000281831.1	HCP5B	9160	2.65e-22	0.995028	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000181126.13	HLA-V	91989	1.63e-07	-0.447724	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204616.10	TRIM31	-230163	1.34e-09	-0.516704	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000066379.14	POLR1H	-178698	0.000121475	-0.243468	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000230795.3	HLA-K	-44235	1.29e-13	-0.764363	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000239257.1	RPL23AP1	156061	1.63e-06	0.409232	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000176998.4	HCG4	90507	6.11e-08	-0.616376	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204622.11	HLA-J	-123028	1.7e-09	-0.532086	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000231130.1	HLA-T	-13711	2.65e-07	-0.625883	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000137312.14	FLOT1	-859790	3.94e-13	0.265497	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204644.9	ZFP57	201833	4.05e-16	0.949746	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000214894.6	LINC00243	-947716	0.000270129	0.362859	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000146112.11	PPP1R18	-804952	9.3e-06	-0.173099	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204632.11	HLA-G	55976	7.88e-10	-0.591262	8e-07
breast cancer	6_30003183	rs3094146	ENSG00000204632.11	HLA-G	176216	1.33e-09	-0.582804	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000066379.14	POLR1H	-58458	0.00022107	-0.233856	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000230795.3	HLA-K	76005	7.03e-12	-0.709812	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204622.11	HLA-J	-2788	1.18e-08	-0.504163	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000176998.4	HCG4	210747	5.38e-08	-0.618111	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000281831.1	HCP5B	129400	6.11e-21	0.963796	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000181126.13	HLA-V	212229	3.05e-07	-0.437463	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000239257.1	RPL23AP1	276301	1.56e-05	0.369253	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000137312.14	FLOT1	-739550	6.46e-15	0.283527	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000214894.6	LINC00243	-827476	0.000172878	0.373508	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204644.9	ZFP57	322073	7.54e-15	0.909264	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204616.10	TRIM31	-109923	1.47e-09	-0.514795	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000231130.1	HLA-T	106529	1.23e-06	-0.590167	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000146112.11	PPP1R18	-684712	1.95e-05	-0.166686	7e-07
breast cancer	6_30107326	rs2523992	ENSG00000204622.11	HLA-J	101355	2.45e-05	-0.296437	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000204644.9	ZFP57	426216	0.000104407	0.36679	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000214894.6	LINC00243	-723333	3.49e-05	0.323919	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000137312.14	FLOT1	-635407	2.96e-11	0.192367	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000204623.9	ZNRD1ASP	46073	1.02e-05	-0.175147	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000176998.4	HCG4	314890	2.63e-06	-0.422676	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000281831.1	HCP5B	233543	4.11e-07	0.424101	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000230795.3	HLA-K	180148	1.57e-05	-0.357988	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000239257.1	RPL23AP1	380444	0.000208578	0.250496	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000204616.10	TRIM31	-5780	4.93e-09	-0.39302	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000231130.1	HLA-T	210672	0.00020038	-0.358519	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000204632.11	HLA-G	280359	3.25e-07	-0.389332	2e-07
breast cancer	6_30365728	rs3094054	ENSG00000204632.11	HLA-G	538761	7.71e-11	-0.624526	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000176998.4	HCG4	573292	3.56e-07	-0.580842	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000196260.4	SFTA2	-589908	9.49e-05	0.159627	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204536.13	CCHCR1	-792510	2.82e-11	0.414609	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000231130.1	HLA-T	469074	1.72e-05	-0.525267	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000146112.11	PPP1R18	-322167	1.26e-06	-0.188927	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204622.11	HLA-J	359757	1.81e-07	-0.463441	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000235290.1	HLA-W	409132	0.000189846	-0.440941	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000239257.1	RPL23AP1	638846	1.59e-06	0.409944	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000214894.6	LINC00243	-464931	1.58e-06	0.475884	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204644.9	ZFP57	684618	8.56e-13	0.842149	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000137312.14	FLOT1	-377005	2.41e-15	0.288218	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000277402.1	MIR6891	-989588	1.17e-07	-0.492945	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204540.10	PSORS1C1	-749022	2.43e-07	-0.531932	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000230795.3	HLA-K	438550	1.56e-08	-0.591277	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204525.16	HLA-C	-906377	0.000145648	0.310182	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204616.10	TRIM31	252622	8.35e-08	-0.459028	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000181126.13	HLA-V	574774	3.13e-06	-0.399977	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000281831.1	HCP5B	491945	1.31e-16	0.859997	1e-07
breast cancer	6_30374976	rs115707823	ENSG00000146112.11	PPP1R18	-312919	6.03e-08	-0.193653	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000239257.1	RPL23AP1	648094	0.000125598	0.302647	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000176998.4	HCG4	582540	1.31e-08	-0.594451	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000235290.1	HLA-W	418380	7.25e-05	-0.430759	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000181126.13	HLA-V	584022	1.86e-07	-0.410148	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204540.10	PSORS1C1	-739774	0.000242976	-0.350313	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000214894.6	LINC00243	-455683	1.65e-05	0.393726	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204622.11	HLA-J	369005	1.46e-05	-0.35584	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000137312.14	FLOT1	-367757	4.18e-12	0.233929	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204632.11	HLA-G	548009	2.01e-07	-0.462909	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204536.13	CCHCR1	-783262	3.11e-09	0.341257	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000230795.3	HLA-K	447798	1.39e-06	-0.466381	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000196260.4	SFTA2	-580660	1.79e-05	0.161073	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000277402.1		-980340	5.58e-06	-0.390306	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204644.9		693866	5.81e-09	0.636632	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000281831.1	HCP5B	501193	5.65e-14	0.723383	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204616.10	TRIM31	261870	1.87e-06	-0.376778	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000146112.11	PPP1R18	-312919	6.03e-08	-0.193653	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000239257.1	RPL23AP1	648094	0.000125598	0.302647	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000176998.4	HCG4	582540	1.31e-08	-0.594451	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000235290.1	HLA-W	418380	7.25e-05	-0.430759	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000181126.13	HLA-V	584022	1.86e-07	-0.410148	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204540.10	PSORS1C1	-739774	0.000242976	-0.350313	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000214894.6	LINC00243	-455683	1.65e-05	0.393726	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204622.11	HLA-J	369005	1.46e-05	-0.35584	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000137312.14	FLOT1	-367757	4.18e-12	0.233929	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204632.11	HLA-G	548009	2.01e-07	-0.462909	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204536.13	CCHCR1	-783262	3.11e-09	0.341257	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000230795.3	HLA-K	447798	1.39e-06	-0.466381	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000196260.4	SFTA2	-580660	1.79e-05	0.161073	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000277402.1	MIR6891	-980340	5.58e-06	-0.390306	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204644.9	ZFP57	693866	5.81e-09	0.636632	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000281831.1	HCP5B	501193	5.65e-14	0.723383	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204616.10	TRIM31	261870	1.87e-06	-0.376778	5e-07
breast cancer	6_30473526	rs3132615	ENSG00000277402.1	MIR6891	-881790	5.13e-08	-0.479643	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000239257.1	RPL23AP1	746644	5.04e-05	0.329143	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000214894.6	LINC00243	-357133	1.97e-06	0.446728	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204622.11	HLA-J	467555	8.48e-07	-0.414982	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000181126.13	HLA-V	682572	2.16e-05	-0.34592	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204632.11	HLA-G	646559	1.08e-08	-0.522671	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000176998.4	HCG4	681090	1.35e-05	-0.472103	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000146112.11	PPP1R18	-214369	3.14e-07	-0.188607	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204525.16	HLA-C	-798579	0.000198938	0.287882	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000281831.1	HCP5B	599743	1.5e-14	0.760916	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000196260.4	SFTA2	-482110	6.25e-06	0.174506	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204644.9	ZFP57	792416	1.18e-11	0.758666	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000230795.3	HLA-K	546348	9.13e-08	-0.530257	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204536.13	CCHCR1	-684712	9.47e-12	0.401622	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000137312.14	FLOT1	-269207	3.18e-15	0.271908	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204616.10	TRIM31	360420	2.14e-07	-0.421231	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204540.10	PSORS1C1	-641224	1.3e-06	-0.473218	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000231130.1	HLA-T	576872	0.000145003	-0.440852	2e-06
breast cancer	6_30576624	rs3132610	ENSG00000281831.1	HCP5B	702841	1.16e-15	0.804274	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204540.10	PSORS1C1	-538126	2.26e-07	-0.513999	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204536.13	CCHCR1	-581614	1.54e-12	0.42315	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000176998.4	HCG4	784188	3.19e-07	-0.561999	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204644.9	ZFP57	895514	4.15e-12	0.78803	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000225851.1	HLA-S	-805664	0.000248876	-0.41304	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000146112.11	PPP1R18	-111271	1.4e-06	-0.181311	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000277402.1	MIR6891	-778692	2.33e-07	-0.463999	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204525.16	HLA-C	-695481	5.95e-06	0.355157	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000214894.6	LINC00243	-254035	3.06e-07	0.488282	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204632.11	HLA-G	749657	4.95e-09	-0.543524	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204616.10	TRIM31	463518	1.21e-08	-0.469341	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000137312.14	FLOT1	-166109	1.53e-17	0.297412	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000231130.1	HLA-T	679970	8.33e-06	-0.524503	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000137411.16	VARS2	-337581	1.79e-05	-0.304109	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204622.11	HLA-J	570653	1.98e-05	-0.36711	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000196260.4	SFTA2	-379012	1.53e-06	0.188644	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000230795.3	HLA-K	649446	6.77e-10	-0.619802	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000181126.13	HLA-V	785670	1.82e-05	-0.355053	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000239257.1	RPL23AP1	849742	6.56e-06	0.371565	1e-06
breast cancer	6_30682249	rs9262142	ENSG00000240053.8	LY6G5B	-987918	1.26e-09	0.205532	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000239257.1	RPL23AP1	955367	1.41e-05	0.359632	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204622.11	HLA-J	676278	9.81e-06	-0.381524	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000176998.4	HCG4	889813	2.52e-07	-0.568839	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000181126.13	HLA-V	891295	2.03e-05	-0.354383	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000225851.1	HLA-S	-700039	0.000137352	-0.431228	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000196260.4	SFTA2	-273387	1.58e-06	0.189072	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000281831.1	HCP5B	808466	5.13e-17	0.842208	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204525.16	HLA-C	-589856	8.11e-06	0.351417	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204540.10	PSORS1C1	-432501	1.32e-07	-0.525513	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000230795.3	HLA-K	755071	9.87e-10	-0.616336	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204536.13	CCHCR1	-475989	2.4e-13	0.439087	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000214894.6	LINC00243	-148410	1.31e-07	0.504774	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000277402.1	MIR6891	-673067	7.55e-08	-0.483778	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204616.10	TRIM31	569143	1.2e-08	-0.471277	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000231130.1	HLA-T	785595	7.29e-06	-0.529763	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000146112.11	PPP1R18	-5646	4.06e-07	-0.190837	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000137411.16	VARS2	-231956	2.12e-05	-0.302559	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000199332.1	Y_RNA	-720001	0.000198699	0.395031	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204632.11	HLA-G	855282	2.9e-09	-0.553478	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000137312.14	FLOT1	-60484	5.41e-17	0.293766	3e-06
breast cancer	6_30793795	rs3129984	ENSG00000225851.1	HLA-S	-588493	5.34e-06	-0.496571	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000277402.1	MIR6891	-561521	8.44e-10	-0.531848	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000137312.14	FLOT1	51062	4.72e-16	0.276247	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204538.3	PSORS1C2	-345555	0.00011694	-0.414807	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000214894.6	LINC00243	-36864	1.58e-08	0.522197	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204525.16	HLA-C	-478310	7.02e-07	0.377221	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000281831.1	HCP5B	920012	1.1e-15	0.782081	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204536.13	CCHCR1	-364443	6.43e-14	0.434578	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000231130.1	HLA-T	897141	1.55e-05	-0.494456	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000230795.3	HLA-K	866617	3.39e-09	-0.577913	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000146112.11	PPP1R18	105900	1.74e-06	-0.174619	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204622.11	HLA-J	787824	1.83e-05	-0.358161	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204616.10	TRIM31	680689	6.36e-09	-0.464476	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000137411.16	VARS2	-120410	6.14e-06	-0.311111	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204540.10	PSORS1C1	-320955	4.67e-09	-0.562838	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000196260.4	SFTA2	-161841	5e-07	0.191418	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000240053.8	LY6G5B	-876372	1.14e-08	0.187514	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000235290.1	HLA-W	837199	0.000120984	-0.425113	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204632.11	HLA-G	966828	1.01e-10	-0.581422	8e-06
breast cancer	6_31347004	rs115392158	ENSG00000214894.6	LINC00243	516345	4.47e-05	0.269515	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000277402.1	MIR6891	-8312	1.02e-09	-0.375124	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000228789.6	HCG22	293554	1.47e-05	-0.299613	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000244731.7	C4A	-635020	6.17e-16	-0.404757	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204540.10	PSORS1C1	232254	3.82e-08	-0.375286	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000137312.14	FLOT1	604271	1.82e-06	0.117884	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204338.8	CYP21A1P	-658685	1.14e-07	-0.347116	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204536.13	CCHCR1	188766	1.56e-07	0.218912	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000214894.6	LINC00243	516345	4.47e-05	0.269515	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000277402.1	MIR6891	-8312	1.02e-09	-0.375124	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000228789.6	HCG22	293554	1.47e-05	-0.299613	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000244731.7	C4A	-635020	6.17e-16	-0.404757	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204540.10	PSORS1C1	232254	3.82e-08	-0.375286	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000137312.14	FLOT1	604271	1.82e-06	0.117884	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204338.8	CYP21A1P	-658685	1.14e-07	-0.347116	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204536.13	CCHCR1	188766	1.56e-07	0.218912	9e-06
breast cancer	6_32699696	rs147527678	ENSG00000198502.5	HLA-DRB5	169409	6.69e-07	-0.36351	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000204338.8	CYP21A1P	694007	1.58e-06	-0.342642	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000196301.3	HLA-DRB9	226196	2.99e-06	0.343236	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	6.47e-16	-0.476638	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000196735.11	HLA-DQA1	71517	4.88e-08	-0.29501	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000223534.1	HLA-DQB1-AS1	39341	2.25e-09	-0.309577	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000244731.7	C4A	717672	7.15e-10	-0.340487	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000231852.6	CYP21A2	661431	7.28e-05	0.2831	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000232629.8	HLA-DQB2	-63838	7.35e-09	0.417387	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000198502.5	HLA-DRB5	169409	6.69e-07	-0.36351	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000204338.8	CYP21A1P	694007	1.58e-06	-0.342642	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000196301.3	HLA-DRB9	226196	2.99e-06	0.343236	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	6.47e-16	-0.476638	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000196735.11	HLA-DQA1	71517	4.88e-08	-0.29501	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000223534.1	HLA-DQB1-AS1	39341	2.25e-09	-0.309577	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000244731.7	C4A	717672	7.15e-10	-0.340487	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000231852.6	CYP21A2	661431	7.28e-05	0.2831	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000232629.8	HLA-DQB2	-63838	7.35e-09	0.417387	6e-08
breast cancer	6_33272092	rs17215231	ENSG00000235863.3	B3GALT4	-5040	5.76e-10	0.242495	9e-13
breast cancer	6_33272092	rs17215231	ENSG00000231500.6	RPS18	44	7.07e-86	-0.775384	9e-13
breast cancer	6_43259403	rs111342015	ENSG00000112667.12	DNPH1	29919	2.7e-17	-0.295889	9e-08
breast cancer	7_100437651	rs117911427	ENSG00000121716.20	PILRB	85475	9.85e-08	0.738945	7e-06
breast cancer	7_100437651	rs117911427	ENSG00000242294.6	STAG3L5P	101239	9.08e-07	0.673579	7e-06
breast cancer	7_102478605	rs369574511	ENSG00000160991.15	ORAI2	45499	8.01e-06	0.126772	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000161036.12	LRWD1	13676	1.12e-26	-0.271737	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000233297.4	RASA4DP	-211864	4.05e-05	0.229594	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000105808.17	RASA4	-138152	0.000179841	0.166157	2e-07
breast cancer	7_103251337	rs6946892	ENSG00000228049.7	POLR2J2	579708	0.00012915	0.246435	1e-07
breast cancer	7_130969092	rs2048672	ENSG00000091732.15	ZC3HC1	917641	7.08e-06	0.0905655	6e-06
breast cancer	7_144351809	rs62485509	ENSG00000204959.4	ARHGEF34P	64843	2.66e-12	-0.459467	4e-12
breast cancer	7_144351809	rs62485509	ENSG00000170356.8	OR2A20P	98852	3.82e-12	0.540145	4e-12
breast cancer	7_144351809	rs62485509	ENSG00000228960.5	OR2A9P	57329	2e-05	-0.331233	4e-12
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	9.37e-14	-0.424602	2e-11
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	1.23e-10	0.437584	2e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	9.37e-14	-0.424602	4e-10
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	1.23e-10	0.437584	4e-10
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	9.37e-14	-0.424602	1e-11
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	1.23e-10	0.437584	1e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	9.37e-14	-0.424602	7e-11
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	1.23e-10	0.437584	7e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	9.37e-14	-0.424602	7e-12
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	1.23e-10	0.437584	7e-12
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	9.37e-14	-0.424602	1e-08
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	1.23e-10	0.437584	1e-08
breast cancer	7_144477198	rs13230714	ENSG00000244198.5	ARHGEF35-AS1	282340	8.05e-05	-0.238454	1e-06
breast cancer	7_144477198	rs13230714	ENSG00000204959.4	ARHGEF34P	190232	4.8e-07	-0.270889	1e-06
breast cancer	7_38712494	rs7794030	ENSG00000164556.7	FAM183BP	25457	6.32e-09	-0.25326	1e-06
breast cancer	7_38728314	rs1468348	ENSG00000164556.7	FAM183BP	41277	5.55e-10	-0.265089	5e-06
breast cancer	7_67594280	rs10263639	ENSG00000106610.14	STAG3L4	288293	5.79e-05	-0.269987	3e-06
breast cancer	7_74696373	rs74910854	ENSG00000277053.4	GTF2IP1	-541323	3.27e-16	-0.691548	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000196275.13	GTF2IRD2	-155178	9.52e-20	0.51298	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000123965.13	PMS2P5	-197743	7.4e-15	0.771604	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000277072.4	STAG3L2	-194237	4.68e-08	0.392051	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000263001.5	GTF2I	38706	3.62e-21	0.367806	5e-06
breast cancer	7_94484487	rs17268829	ENSG00000127990.15	SGCE	-171722	4.08e-12	0.245269	4e-15
breast cancer	7_94484487	rs17268829	ENSG00000127990.15	SGCE	-171722	4.08e-12	0.245269	5e-13
breast cancer	8_103189173	rs12548629	ENSG00000266289.1	LINC02933	-194681	4.79e-05	0.252813	3e-07
breast cancer	8_120102785	rs1519814	ENSG00000187955.11	COL14A1	43005	2.38e-05	-0.150111	8e-07
breast cancer	8_123726378	rs970821	ENSG00000104537.16	ANXA13	-11029	2.84e-06	-0.223702	2e-12
breast cancer	8_17926905	rs11779988	ENSG00000078674.17	PCM1	4065	4.77e-05	-0.139181	2e-06
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	7.27e-11	0.317469	6e-09
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	7.27e-11	0.317469	3e-08
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	7.27e-11	0.317469	1e-08
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	7.27e-11	0.317469	3e-07
breast cancer	8_22634616	rs6558174	ENSG00000158941.16	CCAR2	29984	8.08e-12	0.168854	3e-06
breast cancer	8_30372068	rs7834448	ENSG00000254152.1	PPIAP84	21721	1.52e-08	0.297655	7e-06
breast cancer	8_30372068	rs7834448	ENSG00000127589.4	TUBBP1	20195	6.69e-07	0.278207	7e-06
breast cancer	9_116551207	rs1895062	ENSG00000148219.16	ASTN2	-863863	8.53e-05	-0.152031	1e-13
breast cancer	9_116551207	rs1895062	ENSG00000148219.16	ASTN2	-863863	8.53e-05	-0.152031	1e-14
breast cancer	9_116562650	rs1321917	ENSG00000148219.16	ASTN2	-852420	3.28e-05	-0.157315	2e-07
breast cancer	9_133463535	rs3124765	ENSG00000148297.15	MED22	115404	8.52e-06	-0.159074	2e-06
breast cancer	9_133463535	rs3124765	ENSG00000148290.9	SURF1	106859	2.46e-10	0.243782	2e-06