DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE breast cancer 1_100414772 rs612683 ENSG00000079335.18 CDC14A 63038 2e-12 -0.237842 3e-07 breast cancer 1_10506158 rs616488 ENSG00000160049.11 DFFA 33632 0.000167932 -0.0980357 1e-08 breast cancer 1_10506158 rs616488 ENSG00000175279.21 CENPS 75375 7.54e-07 0.198881 1e-08 breast cancer 1_10506158 rs616488 ENSG00000160049.11 DFFA 33632 0.000167932 -0.0980357 5e-20 breast cancer 1_10506158 rs616488 ENSG00000175279.21 CENPS 75375 7.54e-07 0.198881 5e-20 breast cancer 1_10506158 rs616488 ENSG00000160049.11 DFFA 33632 0.000167932 -0.0980357 9e-09 breast cancer 1_10506158 rs616488 ENSG00000175279.21 CENPS 75375 7.54e-07 0.198881 9e-09 breast cancer 1_10506158 rs616488 ENSG00000160049.11 DFFA 33632 0.000167932 -0.0980357 4e-11 breast cancer 1_10506158 rs616488 ENSG00000175279.21 CENPS 75375 7.54e-07 0.198881 4e-11 breast cancer 1_10506158 rs616488 ENSG00000160049.11 DFFA 33632 0.000167932 -0.0980357 2e-10 breast cancer 1_10506158 rs616488 ENSG00000175279.21 CENPS 75375 7.54e-07 0.198881 2e-10 breast cancer 1_10506158 rs616488 ENSG00000160049.11 DFFA 33632 0.000167932 -0.0980357 4e-18 breast cancer 1_10506158 rs616488 ENSG00000175279.21 CENPS 75375 7.54e-07 0.198881 4e-18 breast cancer 1_10506158 rs616488 ENSG00000160049.11 DFFA 33632 0.000167932 -0.0980357 2e-23 breast cancer 1_10506158 rs616488 ENSG00000175279.21 CENPS 75375 7.54e-07 0.198881 2e-23 breast cancer 1_10535965 rs2506889 ENSG00000175279.21 CENPS 105182 2.18e-10 0.258691 2e-20 breast cancer 1_10535965 rs2506889 ENSG00000160049.11 DFFA 63439 4.31e-05 -0.108785 2e-20 breast cancer 1_10536284 rs12375 ENSG00000160049.11 DFFA 63758 4.31e-05 -0.108785 1e-05 breast cancer 1_10536284 rs12375 ENSG00000175279.21 CENPS 105501 2.18e-10 0.258691 1e-05 breast cancer 1_109637134 rs17024629 ENSG00000235045.2 RPL7P8 -14236 1.34e-05 -0.352288 3e-08 breast cancer 1_109637134 rs17024629 ENSG00000168765.16 GSTM4 -18947 2.63e-12 0.383815 3e-08 breast cancer 1_109637134 rs17024629 ENSG00000235045.2 RPL7P8 -14236 1.34e-05 -0.352288 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000168765.16 GSTM4 -18947 2.63e-12 0.383815 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000235045.2 RPL7P8 -14236 1.34e-05 -0.352288 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000168765.16 GSTM4 -18947 2.63e-12 0.383815 1e-06 breast cancer 1_113903258 rs7513707 ENSG00000226167.1 AP4B1-AS1 46623 0.000172766 -0.181665 2e-11 breast cancer 1_113905767 rs11552449 ENSG00000226167.1 AP4B1-AS1 49132 9.77e-05 -0.188664 3e-09 breast cancer 1_113905767 rs11552449 ENSG00000226167.1 AP4B1-AS1 49132 9.77e-05 -0.188664 1e-09 breast cancer 1_113905767 rs11552449 ENSG00000226167.1 AP4B1-AS1 49132 9.77e-05 -0.188664 5e-11 breast cancer 1_113905767 rs11552449 ENSG00000226167.1 AP4B1-AS1 49132 9.77e-05 -0.188664 2e-08 breast cancer 1_113905767 rs11552449 ENSG00000226167.1 AP4B1-AS1 49132 9.77e-05 -0.188664 6e-07 breast cancer 1_118488075 rs10923574 ENSG00000231365.5 WARS2-AS1 -652384 6.98e-05 0.206381 4e-07 breast cancer 1_119942712 rs6697258 ENSG00000270392.2 PFN1P2 -491340 1.52e-05 0.437348 2e-15 breast cancer 1_119942712 rs6697258 ENSG00000270231.3 NBPF8 -493641 0.000210552 0.363306 2e-15 breast cancer 1_121121848 rs369304377 ENSG00000270231.3 NBPF8 685495 2.41e-30 0.548841 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000273136.6 NBPF26 397925 2.8e-09 0.370923 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000270392.2 PFN1P2 687796 8.51e-18 0.43893 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000223345.3 H2BP1 4591 5.29e-22 0.533494 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000227082.1 LINC02798 -274906 8.3e-10 -0.26671 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000171943.11 SRGAP2C -62962 4.01e-07 -0.153371 2e-29 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 4.2e-06 -0.136651 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 2.57e-09 0.364001 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.05e-06 -0.230269 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 2.89e-16 0.449129 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 9.47e-09 -0.244782 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 4.2e-06 -0.136651 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 2.57e-09 0.364001 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.05e-06 -0.230269 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 2.89e-16 0.449129 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 9.47e-09 -0.244782 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 4.2e-06 -0.136651 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 2.57e-09 0.364001 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.05e-06 -0.230269 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 2.89e-16 0.449129 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 9.47e-09 -0.244782 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 4.2e-06 -0.136651 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 2.57e-09 0.364001 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.05e-06 -0.230269 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 2.89e-16 0.449129 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 9.47e-09 -0.244782 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 4.2e-06 -0.136651 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 2.57e-09 0.364001 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.05e-06 -0.230269 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 2.89e-16 0.449129 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 9.47e-09 -0.244782 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 4.2e-06 -0.136651 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 2.57e-09 0.364001 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.05e-06 -0.230269 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 2.89e-16 0.449129 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 9.47e-09 -0.244782 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 4.2e-06 -0.136651 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 2.57e-09 0.364001 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.05e-06 -0.230269 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 2.89e-16 0.449129 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 9.47e-09 -0.244782 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 4.2e-06 -0.136651 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 2.57e-09 0.364001 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.05e-06 -0.230269 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 2.89e-16 0.449129 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 9.47e-09 -0.244782 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 4.2e-06 -0.136651 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 2.57e-09 0.364001 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.05e-06 -0.230269 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 2.89e-16 0.449129 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000227082.1 LINC02798 142061 9.47e-09 -0.244782 3e-27 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.64e-16 0.360139 2e-07 breast cancer 1_145790097 rs12405132 ENSG00000198483.12 ANKRD35 -95769 0.000117396 0.159186 2e-07 breast cancer 1_145790097 rs12405132 ENSG00000265491.4 RNF115 -33980 9.69e-05 0.103213 2e-07 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.64e-16 0.360139 6e-10 breast cancer 1_145790097 rs12405132 ENSG00000198483.12 ANKRD35 -95769 0.000117396 0.159186 6e-10 breast cancer 1_145790097 rs12405132 ENSG00000265491.4 RNF115 -33980 9.69e-05 0.103213 6e-10 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.64e-16 0.360139 5e-09 breast cancer 1_145790097 rs12405132 ENSG00000198483.12 ANKRD35 -95769 0.000117396 0.159186 5e-09 breast cancer 1_145790097 rs12405132 ENSG00000265491.4 RNF115 -33980 9.69e-05 0.103213 5e-09 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.64e-16 0.360139 8e-09 breast cancer 1_145790097 rs12405132 ENSG00000198483.12 ANKRD35 -95769 0.000117396 0.159186 8e-09 breast cancer 1_145790097 rs12405132 ENSG00000265491.4 RNF115 -33980 9.69e-05 0.103213 8e-09 breast cancer 1_155016057 rs77548871 ENSG00000143630.9 HCN3 -261526 0.000156321 0.319799 5e-09 breast cancer 1_155176305 rs4971059 ENSG00000160766.14 GBAP1 -51117 9.4e-08 -0.173073 2e-10 breast cancer 1_155176305 rs4971059 ENSG00000143630.9 HCN3 -101278 4.51e-07 -0.169795 2e-10 breast cancer 1_155176305 rs4971059 ENSG00000160766.14 GBAP1 -51117 9.4e-08 -0.173073 5e-11 breast cancer 1_155176305 rs4971059 ENSG00000143630.9 HCN3 -101278 4.51e-07 -0.169795 5e-11 breast cancer 1_155212052 rs2974935 ENSG00000160753.15 RUSC1 -109644 6.93e-05 -0.0753242 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000143630.9 HCN3 -65531 8.86e-18 -0.252507 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000169231.13 THBS3 4071 2e-11 0.182696 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000143627.17 PKLR -89382 1.11e-05 -0.229237 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000160766.14 GBAP1 -15370 7.63e-25 -0.287182 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000177628.15 GBA -32647 2.13e-05 -0.0935704 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000185499.16 MUC1 19136 0.000230212 -0.0884779 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000160767.20 FAM189B -43431 3.97e-05 0.0978583 2e-07 breast cancer 1_155212373 rs2075570 ENSG00000160753.15 RUSC1 -109323 3.46e-05 -0.0780901 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000143627.17 PKLR -89061 1.6e-05 -0.224404 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000160766.14 GBAP1 -15049 3.76e-25 -0.287936 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000169231.13 THBS3 4392 4.1e-11 0.179366 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000160767.20 FAM189B -43110 3.15e-05 0.0987864 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000177628.15 GBA -32326 1.73e-05 -0.0942744 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000143630.9 HCN3 -65210 8.74e-18 -0.251739 5e-06 breast cancer 1_155216951 rs1057941 ENSG00000143630.9 HCN3 -60632 5.18e-11 -0.200776 2e-07 breast cancer 1_155216951 rs1057941 ENSG00000160766.14 GBAP1 -10471 1.41e-09 -0.179302 2e-07 breast cancer 1_155302483 rs7524950 ENSG00000160767.20 FAM189B 47000 8.52e-05 0.104726 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000143627.17 PKLR 1049 8.99e-31 -0.633591 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000160766.14 GBAP1 75061 2.91e-10 -0.203666 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000169231.13 THBS3 94502 1.69e-05 0.132951 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000143630.9 HCN3 24900 1.99e-56 -0.475533 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000143622.10 RIT1 -608921 5.46e-09 -0.194011 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000160753.15 RUSC1 -19213 1.42e-06 -0.10167 3e-09 breast cancer 1_155446537 rs10796944 ENSG00000143622.10 RIT1 -464867 1.12e-11 -0.241143 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000160766.14 GBAP1 219115 2.05e-07 -0.181597 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000143630.9 HCN3 168954 7.78e-35 -0.417738 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000143627.17 PKLR 145103 3.42e-25 -0.620258 7e-10 breast cancer 1_155587180 rs12091730 ENSG00000143622.10 RIT1 -324224 7.24e-12 -0.24488 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000160766.14 GBAP1 359758 1.13e-07 -0.186567 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000143627.17 PKLR 285746 3.21e-24 -0.612791 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000125459.14 MSTO1 -23025 8.97e-05 0.108489 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000143630.9 HCN3 309597 2.07e-32 -0.407164 2e-10 breast cancer 1_155697170 rs348196 ENSG00000143630.9 HCN3 419587 5.94e-27 -0.365998 2e-08 breast cancer 1_155697170 rs348196 ENSG00000160766.14 GBAP1 469748 1.09e-08 -0.196198 2e-08 breast cancer 1_155697170 rs348196 ENSG00000125459.14 MSTO1 86965 9.34e-05 0.105894 2e-08 breast cancer 1_155697170 rs348196 ENSG00000143622.10 RIT1 -214234 9.97e-11 -0.226758 2e-08 breast cancer 1_155697170 rs348196 ENSG00000143627.17 PKLR 395736 9.29e-19 -0.529115 2e-08 breast cancer 1_156183252 rs11264454 ENSG00000196189.12 SEMA4A 35886 2.19e-27 0.316459 2e-08 breast cancer 1_156183252 rs11264454 ENSG00000196189.12 SEMA4A 35886 2.19e-27 0.316459 7e-07 breast cancer 1_16013277 rs1763604 ENSG00000186510.11 CLCNKA -5598 1.57e-33 -0.579577 7e-09 breast cancer 1_16013277 rs1763604 ENSG00000142627.12 EPHA2 -142810 1.76e-05 0.163432 7e-09 breast cancer 1_204546897 rs2290854 ENSG00000198625.12 MDM4 30518 1.55e-11 -0.142918 1e-07 breast cancer 1_204549714 rs4245739 ENSG00000198625.12 MDM4 33335 3.61e-07 -0.116631 3e-23 breast cancer 1_204549714 rs4245739 ENSG00000198625.12 MDM4 33335 3.61e-07 -0.116631 4e-06 breast cancer 1_204549714 rs4245739 ENSG00000198625.12 MDM4 33335 3.61e-07 -0.116631 2e-12 breast cancer 1_204549714 rs4245739 ENSG00000198625.12 MDM4 33335 3.61e-07 -0.116631 6e-15 breast cancer 1_204549714 rs4245739 ENSG00000198625.12 MDM4 33335 3.61e-07 -0.116631 8e-18 breast cancer 1_207903511 rs2724379 ENSG00000284237.1 LINC02767 -55781 3.24e-21 -0.422212 2e-07 breast cancer 1_45918469 rs12077974 ENSG00000234329.1 RPL7AP16 266643 5.19e-06 0.206011 2e-07 breast cancer 1_45918469 rs12077974 ENSG00000132780.16 NASP 334623 0.000102701 -0.10128 2e-07 breast cancer 1_45918469 rs12077974 ENSG00000126088.13 UROD 906322 3.82e-05 -0.111421 2e-07 breast cancer 1_46135245 rs1707302 ENSG00000234329.1 RPL7AP16 483419 2.22e-05 -0.187113 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000171357.5 LURAP1 -68089 6.18e-05 -0.113912 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000232022.7 FAAHP1 -296884 9.83e-06 -0.158354 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000086015.20 MAST2 348258 0.000296229 0.0930811 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000132780.16 NASP 551399 0.000127666 0.0973563 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000234329.1 RPL7AP16 483419 2.22e-05 -0.187113 3e-08 breast cancer 1_46135245 rs1707302 ENSG00000171357.5 LURAP1 -68089 6.18e-05 -0.113912 3e-08 breast cancer 1_46135245 rs1707302 ENSG00000232022.7 FAAHP1 -296884 9.83e-06 -0.158354 3e-08 breast cancer 1_46135245 rs1707302 ENSG00000086015.20 MAST2 348258 0.000296229 0.0930811 3e-08 breast cancer 1_46135245 rs1707302 ENSG00000132780.16 NASP 551399 0.000127666 0.0973563 3e-08 breast cancer 1_91555907 rs12134245 ENSG00000097046.12 CDC7 55014 7.04e-25 -0.368753 4e-06 breast cancer 10_11806793 rs12358475 ENSG00000134463.14 ECHDC3 64427 1.58e-05 0.156244 2e-06 breast cancer 10_119567672 rs9421352 ENSG00000151923.17 TIAL1 -29357 8.81e-05 0.101509 1e-07 breast cancer 10_121568362 rs10510097 ENSG00000107679.14 PLEKHA1 -806334 6.12e-05 0.145706 2e-58 breast cancer 10_121795069 rs111605422 ENSG00000226864.2 ATE1-AS1 -133243 8.22e-05 0.478364 9e-13 breast cancer 10_121865675 rs10510102 ENSG00000226864.2 ATE1-AS1 -62637 1.16e-06 0.321878 2e-06 breast cancer 10_121904429 rs7899628 ENSG00000226864.2 ATE1-AS1 -23883 7.53e-28 -0.550293 9e-10 breast cancer 10_127011685 rs9418690 ENSG00000150760.12 DOCK1 106276 2.09e-07 -0.153697 1e-06 breast cancer 10_27080233 rs7918232 ENSG00000120539.14 MASTL -75034 1.5e-29 0.605556 8e-06 breast cancer 10_27080233 rs7918232 ENSG00000230445.4 LRRC37A6P -179222 1.12e-12 0.468611 8e-06 breast cancer 10_37101682 rs1200921 ENSG00000175395.15 ZNF25 -874951 0.000658017 -0.109492 6e-06 breast cancer 10_5630056 rs4414128; rs2386661; rs17141741 ENSG00000196372.12 ASB13 -36539 6.11e-11 0.218312 5e-06 breast cancer 10_5752689 rs55910451 ENSG00000057608.16 GDI2 -89443 1.04e-23 -0.224039 4e-07 breast cancer 10_92172529 rs72807246 ENSG00000107864.14 CPEB3 -118558 6.55e-10 -0.313287 3e-06 breast cancer 10_92172529 rs72807246 ENSG00000198060.9 MARCHF5 -118634 0.000154168 -0.15359 3e-06 breast cancer 10_92172529 rs72807246 ENSG00000228701.1 TNKS2-DT 374238 2.03e-15 0.673007 3e-06 breast cancer 11_111765903 rs643506 ENSG00000137713.15 PPP2R1B -524 2.23e-13 -0.315962 2e-07 breast cancer 11_111765903 rs643506 ENSG00000255561.6 FDXACB1 -114872 6.47e-08 -0.260484 2e-07 breast cancer 11_111765903 rs643506 ENSG00000230911.1 PPIHP1 -264464 0.000167925 -0.250506 2e-07 breast cancer 11_117214494 rs77683187 ENSG00000168092.13 PAFAH1B2 70227 3.53e-06 -0.195347 2e-06 breast cancer 11_11964514 rs3206824 ENSG00000170242.17 USP47 123091 9.98e-06 0.140071 4e-06 breast cancer 11_120362917 rs7924772 ENSG00000181264.8 TLCD5 37788 2.71e-33 0.46463 4e-08 breast cancer 11_18642694 rs10832963 ENSG00000179119.14 SPTY2D1 7903 9.05e-09 -0.189341 9e-06 breast cancer 11_1871355 rs4980389 ENSG00000283787.1 PRR33 -20417 5.65e-05 0.118425 4e-07 breast cancer 11_1874478 rs4980386 ENSG00000226416.1 MRPL23-AS1 -115442 9.51e-05 0.222204 9e-17 breast cancer 11_1874478 rs4980386 ENSG00000283787.1 PRR33 -17294 4.3e-05 0.1194 9e-17 breast cancer 11_1877434 rs1973765 ENSG00000226416.1 MRPL23-AS1 -112486 7.89e-05 0.218864 1e-37 breast cancer 11_1877434 rs1973765 ENSG00000283787.1 PRR33 -14338 3.8e-05 0.117089 1e-37 breast cancer 11_1880867 rs4980383 ENSG00000226416.1 MRPL23-AS1 -109053 0.000111164 -0.218237 3e-06 breast cancer 11_1880867 rs4980383 ENSG00000226416.1 MRPL23-AS1 -109053 0.000111164 -0.218237 9e-09 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 2.47e-08 -0.340493 6e-21 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 2.47e-08 -0.340493 2e-11 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 2.47e-08 -0.340493 2e-13 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 2.47e-08 -0.340493 1e-10 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 2.47e-08 -0.340493 3e-09 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 2.47e-08 -0.340493 1e-18 breast cancer 11_1892909 rs576603 ENSG00000283787.1 PRR33 1137 3.97e-05 0.119642 2e-08 breast cancer 11_1892909 rs576603 ENSG00000226416.1 MRPL23-AS1 -97011 6.02e-07 0.281961 2e-08 breast cancer 11_47325389 rs11039183 ENSG00000165917.9 RAPSN -123789 3.16e-05 -0.112618 6e-06 breast cancer 11_47325389 rs11039183 ENSG00000149187.17 CELF1 -239946 3.47e-06 -0.106276 6e-06 breast cancer 11_62126500 rs7937840 ENSG00000149503.12 INCENP 2527 5.87e-06 -0.190338 2e-09 breast cancer 11_62126500 rs7937840 ENSG00000149503.12 INCENP 2527 5.87e-06 -0.190338 1e-06 breast cancer 11_65815595 rs3903072 ENSG00000172500.12 FIBP -72944 0.000291988 -0.0759937 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000175334.7 BANF1 -186582 0.000299241 0.0590813 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 7.72e-22 -0.466142 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172757.12 CFL1 -46351 2.68e-06 0.0530049 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 1.49e-16 0.37202 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172500.12 FIBP -72944 0.000291988 -0.0759937 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000175334.7 BANF1 -186582 0.000299241 0.0590813 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 7.72e-22 -0.466142 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172757.12 CFL1 -46351 2.68e-06 0.0530049 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 1.49e-16 0.37202 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172500.12 FIBP -72944 0.000291988 -0.0759937 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000175334.7 BANF1 -186582 0.000299241 0.0590813 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 7.72e-22 -0.466142 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172757.12 CFL1 -46351 2.68e-06 0.0530049 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 1.49e-16 0.37202 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172500.12 FIBP -72944 0.000291988 -0.0759937 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000175334.7 BANF1 -186582 0.000299241 0.0590813 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 7.72e-22 -0.466142 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172757.12 CFL1 -46351 2.68e-06 0.0530049 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 1.49e-16 0.37202 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172500.12 FIBP -72944 0.000291988 -0.0759937 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000175334.7 BANF1 -186582 0.000299241 0.0590813 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 7.72e-22 -0.466142 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172757.12 CFL1 -46351 2.68e-06 0.0530049 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 1.49e-16 0.37202 1e-10 breast cancer 11_65935052 rs617791 ENSG00000172543.7 CTSW 55243 1.33e-09 0.289188 7e-06 breast cancer 11_65935052 rs617791 ENSG00000175376.8 EIF1AD -67026 0.000303988 -0.0969651 7e-06 breast cancer 11_65935052 rs617791 ENSG00000172803.17 SNX32 101411 1.67e-10 -0.33173 7e-06 breast cancer 11_65935052 rs617791 ENSG00000175334.7 BANF1 -67125 3.93e-12 0.115841 7e-06 breast cancer 11_66301747 rs1783730 ENSG00000174684.6 B4GAT1 -45945 0.00010692 0.0732068 3e-07 breast cancer 11_66301747 rs1783730 ENSG00000254986.7 DPP3 -178266 0.000264744 -0.0777772 3e-07 breast cancer 11_66324772 rs118151305 ENSG00000175334.7 BANF1 322595 0.000372269 0.104266 6e-09 breast cancer 11_66843174 rs7570 ENSG00000173621.8 LRFN4 -13473 2.47e-07 -0.149916 8e-06 breast cancer 11_66843174 rs7570 ENSG00000254986.7 DPP3 363161 7.96e-06 0.106505 8e-06 breast cancer 11_66843174 rs7570 ENSG00000174684.6 B4GAT1 495482 1.9e-07 -0.10976 8e-06 breast cancer 11_66843174 rs7570 ENSG00000248746.5 ACTN3 296779 7.18e-08 0.313742 8e-06 breast cancer 11_66843174 rs7570 ENSG00000254855.1 KLC2-AS1 577520 7.91e-06 0.171002 8e-06 breast cancer 11_66843174 rs7570 ENSG00000174080.10 CTSF 274333 5.35e-13 0.193969 8e-06 breast cancer 11_68164294 rs4930561 ENSG00000110721.11 CHKA 42850 9.57e-07 -0.11088 3e-07 breast cancer 11_68164294 rs4930561 ENSG00000171067.10 C11orf24 -107707 0.000124833 0.170954 3e-07 breast cancer 11_69138652 rs72932523 ENSG00000162341.16 TPCN2 89755 9.24e-09 0.365373 1e-09 breast cancer 11_803017 rs6597981 ENSG00000177697.17 CD151 -29867 3.39e-07 0.149264 1e-12 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 1.57e-70 0.734527 1e-12 breast cancer 11_803017 rs6597981 ENSG00000177600.8 RPLP2 -6737 5.11e-14 0.122137 1e-12 breast cancer 11_803017 rs6597981 ENSG00000177595.17 PIDD1 -6629 1.14e-25 0.233601 1e-12 breast cancer 11_803017 rs6597981 ENSG00000177666.16 PNPLA2 -15885 6.85e-05 -0.0686657 1e-12 breast cancer 11_803017 rs6597981 ENSG00000177697.17 CD151 -29867 3.39e-07 0.149264 3e-12 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 1.57e-70 0.734527 3e-12 breast cancer 11_803017 rs6597981 ENSG00000177600.8 RPLP2 -6737 5.11e-14 0.122137 3e-12 breast cancer 11_803017 rs6597981 ENSG00000177595.17 PIDD1 -6629 1.14e-25 0.233601 3e-12 breast cancer 11_803017 rs6597981 ENSG00000177666.16 PNPLA2 -15885 6.85e-05 -0.0686657 3e-12 breast cancer 12_120394343 rs206966 ENSG00000089154.10 GCN1 199633 5.03e-06 -0.160684 4e-08 breast cancer 12_120394343 rs206966 ENSG00000089154.10 GCN1 199633 5.03e-06 -0.160684 5e-08 breast cancer 12_120997672 rs2464195 ENSG00000157895.11 C12orf43 -18830 1.38e-09 -0.224582 3e-08 breast cancer 12_120997672 rs2464195 ENSG00000157837.15 SPPL3 93301 0.000211223 -0.102877 3e-08 breast cancer 12_24884534 rs10842422 ENSG00000060982.14 BCAT1 -64925 8.45e-06 0.173388 3e-06 breast cancer 14_67599772 rs7149859 ENSG00000100564.8 PIGH -515 2.33e-07 -0.171791 7e-07 breast cancer 14_68497029 rs765899; rs757369; rs10132579; rs2842347; rs737387; rs2842346 ENSG00000029364.11 SLC39A9 -900986 9.48e-05 0.0956558 2e-06 breast cancer 15_49580388 rs8027730 ENSG00000166262.15 FAM227B -40543 2.48e-18 0.259012 3e-08 breast cancer 15_50402109 rs4774565 ENSG00000244879.6 GABPB1-AS1 46700 4.32e-26 -0.521259 2e-06 breast cancer 15_50402109 rs4774565 ENSG00000104064.16 GABPB1 47151 3.23e-10 -0.14482 2e-06 breast cancer 15_51321455 rs1004983 ENSG00000138600.9 SPPL2A 555647 5.88e-06 0.119632 3e-06 breast cancer 15_74300521 rs12904134 ENSG00000129009.12 ISLR 126850 0.000107753 -0.0786138 8e-06 breast cancer 15_74300521 rs12904134 ENSG00000178802.17 MPI -589484 0.00026266 0.107156 8e-06 breast cancer 15_74300521 rs12904134 ENSG00000178718.6 RPP25 -656697 3.34e-08 -0.194781 8e-06 breast cancer 15_74300521 rs12904134 ENSG00000138623.9 SEMA7A -133946 2.42e-05 0.118905 8e-06 breast cancer 15_74300521 rs12904134 ENSG00000198794.11 SCAMP5 -656944 8.53e-05 -0.164345 8e-06 breast cancer 15_74843920 rs6938 ENSG00000140474.12 ULK3 723 0.000181859 -0.097066 9e-08 breast cancer 15_74843920 rs6938 ENSG00000198794.11 SCAMP5 -113545 4.38e-06 -0.195015 9e-08 breast cancer 15_74843920 rs6938 ENSG00000178802.17 MPI -46085 3.63e-14 0.221168 9e-08 breast cancer 15_74843920 rs6938 ENSG00000140465.13 CYP1A1 118310 3.54e-05 -0.244573 9e-08 breast cancer 15_74843920 rs6938 ENSG00000178718.6 RPP25 -113298 2.82e-21 -0.329589 9e-08 breast cancer 15_74843920 rs6938 ENSG00000138623.9 SEMA7A 409453 1.07e-06 0.139444 9e-08 breast cancer 15_74854991 rs1869959 ENSG00000138623.9 SEMA7A 420524 7.58e-05 0.111404 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000140465.13 CYP1A1 129381 3.43e-05 -0.240175 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000178718.6 RPP25 -102227 2.86e-19 -0.307716 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000178802.17 MPI -35014 1.62e-16 0.234811 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000140474.12 ULK3 11794 9.53e-09 -0.14444 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000138623.9 SEMA7A 420524 7.58e-05 0.111404 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000140465.13 CYP1A1 129381 3.43e-05 -0.240175 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000178718.6 RPP25 -102227 2.86e-19 -0.307716 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000178802.17 MPI -35014 1.62e-16 0.234811 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000140474.12 ULK3 11794 9.53e-09 -0.14444 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000138623.9 SEMA7A 420524 7.58e-05 0.111404 4e-07 breast cancer 15_74854991 rs1869959 ENSG00000140465.13 CYP1A1 129381 3.43e-05 -0.240175 4e-07 breast cancer 15_74854991 rs1869959 ENSG00000178718.6 RPP25 -102227 2.86e-19 -0.307716 4e-07 breast cancer 15_74854991 rs1869959 ENSG00000178802.17 MPI -35014 1.62e-16 0.234811 4e-07 breast cancer 15_74854991 rs1869959 ENSG00000140474.12 ULK3 11794 9.53e-09 -0.14444 4e-07 breast cancer 15_75516399 rs8027365 ENSG00000169410.9 PTPN9 -62890 1.05e-07 -0.146837 1e-07 breast cancer 15_75516399 rs8027365 ENSG00000140400.16 MAN2C1 148245 1.57e-96 0.782775 1e-07 breast cancer 15_75516399 rs8027365 ENSG00000140398.13 NEIL1 169237 7.13e-07 0.131952 1e-07 breast cancer 15_75516399 rs8027365 ENSG00000169371.13 SNUPN -110070 0.000359415 0.102095 1e-07 breast cancer 15_77977130 rs12906542 ENSG00000261143.1 ADAMTS7P3 1088 4.99e-05 0.244319 7e-07 breast cancer 15_79777420 rs166870 ENSG00000136371.10 MTHFS -119959 2.05e-12 -0.310581 3e-07 breast cancer 15_79777420 rs166870 ENSG00000180953.11 ST20 -137836 3.79e-05 -0.252606 3e-07 breast cancer 15_90965985 rs77554484 ENSG00000258725.1 PRC1-AS1 -6875 1.95e-21 -0.580857 1e-15 breast cancer 15_90965985 rs77554484 ENSG00000258384.1 RCCD1-AS1 10760 7.02e-05 -0.176954 1e-15 breast cancer 15_90965985 rs77554484 ENSG00000166965.12 RCCD1 10189 1.37e-38 0.447207 1e-15 breast cancer 15_90968837 rs2290203 ENSG00000258384.1 RCCD1-AS1 13612 0.000127116 -0.141982 2e-19 breast cancer 15_90968837 rs2290203 ENSG00000166965.12 RCCD1 13041 8.56e-20 0.272616 2e-19 breast cancer 15_90968837 rs2290203 ENSG00000140577.15 CRTC3 438912 2.55e-05 0.0945701 2e-19 breast cancer 15_90968837 rs2290203 ENSG00000258725.1 PRC1-AS1 -4023 1.45e-18 -0.449995 2e-19 breast cancer 15_90968837 rs2290203 ENSG00000258384.1 RCCD1-AS1 13612 0.000127116 -0.141982 4e-08 breast cancer 15_90968837 rs2290203 ENSG00000166965.12 RCCD1 13041 8.56e-20 0.272616 4e-08 breast cancer 15_90968837 rs2290203 ENSG00000140577.15 CRTC3 438912 2.55e-05 0.0945701 4e-08 breast cancer 15_90968837 rs2290203 ENSG00000258725.1 PRC1-AS1 -4023 1.45e-18 -0.449995 4e-08 breast cancer 15_90968837 rs2290203 ENSG00000258384.1 RCCD1-AS1 13612 0.000127116 -0.141982 8e-10 breast cancer 15_90968837 rs2290203 ENSG00000166965.12 RCCD1 13041 8.56e-20 0.272616 8e-10 breast cancer 15_90968837 rs2290203 ENSG00000140577.15 CRTC3 438912 2.55e-05 0.0945701 8e-10 breast cancer 15_90968837 rs2290203 ENSG00000258725.1 PRC1-AS1 -4023 1.45e-18 -0.449995 8e-10 breast cancer 16_56387075 rs2432539 ENSG00000087263.16 OGFOD1 -64415 1.04e-08 -0.140439 3e-10 breast cancer 16_56387075 rs2432539 ENSG00000125124.11 BBS2 -133208 2.02e-33 -0.227207 3e-10 breast cancer 16_56387075 rs2432539 ENSG00000087263.16 OGFOD1 -64415 1.04e-08 -0.140439 4e-08 breast cancer 16_56387075 rs2432539 ENSG00000125124.11 BBS2 -133208 2.02e-33 -0.227207 4e-08 breast cancer 16_56497273 rs2303282 ENSG00000125124.11 BBS2 -23010 1.58e-39 -0.246954 3e-07 breast cancer 16_56497273 rs2303282 ENSG00000087263.16 OGFOD1 45783 2.59e-12 -0.171841 3e-07 breast cancer 16_71475893 rs8050871 ENSG00000167377.17 ZNF23 12798 1.72e-22 -0.360207 3e-06 breast cancer 16_71475893 rs8050871 ENSG00000040199.18 PHLPP2 -248808 0.000221202 -0.119619 3e-06 breast cancer 16_71475893 rs8050871 ENSG00000224470.7 ATXN1L -370098 0.000307827 0.0672239 3e-06 breast cancer 17_2195889 rs16952006 ENSG00000167720.12 SRR -107494 9.73e-14 -0.592117 3e-06 breast cancer 17_2195889 rs16952006 ENSG00000108963.17 DPH1 165779 1.86e-06 0.28766 3e-06 breast cancer 17_30560116 rs111780165 ENSG00000176390.11 CRLF3 -264660 3.16e-05 0.243073 8e-08 breast cancer 17_30560116 rs111780165 ENSG00000108587.15 GOSR1 82754 0.000227165 -0.207862 8e-08 breast cancer 17_30689342 rs8081187 ENSG00000176390.11 CRLF3 -135434 6.61e-09 0.297736 2e-07 breast cancer 17_30884649 rs7223535 ENSG00000172171.10 TEFM -22171 6.06e-05 0.161584 4e-10 breast cancer 17_30884649 rs7223535 ENSG00000176390.11 CRLF3 59873 5.61e-11 0.218236 4e-10 breast cancer 17_30884649 rs7223535 ENSG00000264538.6 SUZ12P1 175350 1.42e-06 0.214293 4e-10 breast cancer 17_30887862 rs113934718 ENSG00000172171.10 TEFM -18958 3.37e-05 0.166531 1e-08 breast cancer 17_30887862 rs113934718 ENSG00000176390.11 CRLF3 63086 5.99e-11 0.217318 1e-08 breast cancer 17_30887862 rs113934718 ENSG00000264538.6 SUZ12P1 178563 1.7e-06 0.212131 1e-08 breast cancer 17_30894259 rs62070652 ENSG00000264538.6 SUZ12P1 184960 1.7e-06 0.212131 6e-09 breast cancer 17_30894259 rs62070652 ENSG00000176390.11 CRLF3 69483 5.99e-11 0.217318 6e-09 breast cancer 17_30894259 rs62070652 ENSG00000172171.10 TEFM -12561 3.37e-05 0.166531 6e-09 breast cancer 17_30894259 rs62070652 ENSG00000264538.6 SUZ12P1 184960 1.7e-06 0.212131 1e-06 breast cancer 17_30894259 rs62070652 ENSG00000176390.11 CRLF3 69483 5.99e-11 0.217318 1e-06 breast cancer 17_30894259 rs62070652 ENSG00000172171.10 TEFM -12561 3.37e-05 0.166531 1e-06 breast cancer 17_41094871 rs150537328 ENSG00000167920.8 KRT10-AS1 275709 7.05e-05 0.232736 2e-06 breast cancer 17_42426015 rs138672638 ENSG00000108786.10 HSD17B1 -123199 4.11e-05 0.527357 1e-08 breast cancer 17_42426015 rs138672638 ENSG00000173757.9 STAT5B 149308 7e-05 0.459502 1e-08 breast cancer 17_42684371 rs72826962 ENSG00000108786.10 HSD17B1 135157 2.26e-05 0.484104 5e-09 breast cancer 17_42807276 rs151329939 ENSG00000108786.10 HSD17B1 258062 0.000176347 0.434504 5e-09 breast cancer 17_45394123 rs4763 ENSG00000264070.1 DND1P1 -191748 2.87e-45 1.01219 2e-08 breast cancer 17_45394123 rs4763 ENSG00000214401.4 KANSL1-AS1 -799453 9.61e-62 1.09001 2e-08 breast cancer 17_45394123 rs4763 ENSG00000263503.1 MAPK8IP1P2 -208217 9.96e-60 1.09912 2e-08 breast cancer 17_45394123 rs4763 ENSG00000262500.1 MAPK8IP1P1 -849483 9.49e-37 0.845437 2e-08 breast cancer 17_45394123 rs4763 ENSG00000120088.14 CRHR1 -390157 1e-09 0.454606 2e-08 breast cancer 17_45394123 rs4763 ENSG00000204652.6 RPS26P8 -214448 1.04e-25 0.821212 2e-08 breast cancer 17_45394123 rs4763 ENSG00000176681.14 LRRC37A -898610 1.17e-25 0.801823 2e-08 breast cancer 17_45394123 rs4763 ENSG00000204650.14 LINC02210 -226205 5.7e-93 1.04928 2e-08 breast cancer 17_45394123 rs4763 ENSG00000214425.7 LRRC37A4P -156212 7.45e-82 -1.17734 2e-08 breast cancer 17_45941122 rs62061734 ENSG00000264070.1 DND1P1 355251 1.4e-75 1.14957 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000181513.14 ACBD4 808522 0.000296502 -0.113021 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000204650.14 LINC02210 320794 4.35e-147 1.10873 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000176681.14 LRRC37A -351611 1.78e-39 0.909312 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000204652.6 RPS26P8 332551 5.96e-41 0.945161 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214401.4 KANSL1-AS1 -252454 1.51e-94 1.17823 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000263503.1 MAPK8IP1P2 338782 2.86e-82 1.15033 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000120088.14 CRHR1 156842 2.09e-11 0.46332 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000232300.1 FAM215B -621673 7.29e-11 0.457069 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000108379.9 WNT3 -891936 1.18e-10 0.37765 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000185829.17 ARL17A -638560 2.33e-12 0.498792 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000238083.7 LRRC37A2 -570389 5.1e-86 1.13814 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000262500.1 MAPK8IP1P1 -302484 4.99e-46 0.868383 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000172992.11 DCAKD 880013 9.66e-05 0.192207 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214425.7 LRRC37A4P 390787 7.41e-122 -1.23809 8e-12 breast cancer 17_46751565 rs199533 ENSG00000232300.1 FAM215B 188770 6.95e-13 0.503714 5e-08 breast cancer 17_46751565 rs199533 ENSG00000120088.14 CRHR1 967285 1.6e-10 0.445349 5e-08 breast cancer 17_46751565 rs199533 ENSG00000176681.14 LRRC37A 458832 1.4e-41 0.934171 5e-08 breast cancer 17_46751565 rs199533 ENSG00000185829.17 ARL17A 171883 6.26e-13 0.513444 5e-08 breast cancer 17_46751565 rs199533 ENSG00000108379.9 WNT3 -81493 7.22e-15 0.453636 5e-08 breast cancer 17_46751565 rs199533 ENSG00000214401.4 KANSL1-AS1 557989 4.86e-119 1.26555 5e-08 breast cancer 17_46751565 rs199533 ENSG00000262500.1 MAPK8IP1P1 507959 6.92e-50 0.901716 5e-08 breast cancer 17_46751565 rs199533 ENSG00000073969.18 NSF 160896 0.000350077 -0.122082 5e-08 breast cancer 17_46751565 rs199533 ENSG00000238083.7 LRRC37A2 240054 1.22e-86 1.14622 5e-08 breast cancer 17_46788237 rs199498 ENSG00000232300.1 FAM215B 225442 1.6e-08 0.380077 2e-08 breast cancer 17_46788237 rs199498 ENSG00000185829.17 ARL17A 208555 4.34e-10 0.425504 2e-08 breast cancer 17_46788237 rs199498 ENSG00000214401.4 KANSL1-AS1 594661 2.38e-73 1.03245 2e-08 breast cancer 17_46788237 rs199498 ENSG00000108379.9 WNT3 -44821 1.56e-18 0.481747 2e-08 breast cancer 17_46788237 rs199498 ENSG00000176681.14 LRRC37A 495504 3.61e-31 0.780662 2e-08 breast cancer 17_46788237 rs199498 ENSG00000238083.7 LRRC37A2 276726 1.25e-53 0.914118 2e-08 breast cancer 17_46788237 rs199498 ENSG00000262500.1 MAPK8IP1P1 544631 4.36e-31 0.697827 2e-08 breast cancer 17_50196930 rs2075555 ENSG00000108823.15 SGCA 30945 6.67e-10 -0.39498 8e-08 breast cancer 17_50196930 rs2075555 ENSG00000108821.13 COL1A1 -4702 4.11e-08 0.176812 8e-08 breast cancer 17_54979110 rs6504950 ENSG00000141198.14 TOM1L1 79723 1.75e-26 -0.438494 5e-12 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 9.66e-59 -0.500249 5e-12 breast cancer 17_54979110 rs6504950 ENSG00000166260.10 COX11 10346 1.99e-19 -0.277608 5e-12 breast cancer 17_54979110 rs6504950 ENSG00000141198.14 TOM1L1 79723 1.75e-26 -0.438494 2e-13 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 9.66e-59 -0.500249 2e-13 breast cancer 17_54979110 rs6504950 ENSG00000166260.10 COX11 10346 1.99e-19 -0.277608 2e-13 breast cancer 17_54979110 rs6504950 ENSG00000141198.14 TOM1L1 79723 1.75e-26 -0.438494 8e-09 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 9.66e-59 -0.500249 8e-09 breast cancer 17_54979110 rs6504950 ENSG00000166260.10 COX11 10346 1.99e-19 -0.277608 8e-09 breast cancer 17_54979110 rs6504950 ENSG00000141198.14 TOM1L1 79723 1.75e-26 -0.438494 1e-08 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 9.66e-59 -0.500249 1e-08 breast cancer 17_54979110 rs6504950 ENSG00000166260.10 COX11 10346 1.99e-19 -0.277608 1e-08 breast cancer 17_55132413 rs2787486 ENSG00000166263.13 STXBP4 163627 1.67e-39 -0.409566 2e-34 breast cancer 17_55132413 rs2787486 ENSG00000166260.10 COX11 163649 5.24e-12 -0.208215 2e-34 breast cancer 17_55132413 rs2787486 ENSG00000141198.14 TOM1L1 233026 1.85e-15 -0.323573 2e-34 breast cancer 17_55132413 rs2787486 ENSG00000166263.13 STXBP4 163627 1.67e-39 -0.409566 6e-29 breast cancer 17_55132413 rs2787486 ENSG00000166260.10 COX11 163649 5.24e-12 -0.208215 6e-29 breast cancer 17_55132413 rs2787486 ENSG00000141198.14 TOM1L1 233026 1.85e-15 -0.323573 6e-29 breast cancer 17_55135212 rs2628317 ENSG00000141198.14 TOM1L1 235825 1.77e-16 -0.363396 4e-16 breast cancer 17_55135212 rs2628317 ENSG00000166263.13 STXBP4 166426 4.88e-41 -0.452447 4e-16 breast cancer 17_55135212 rs2628317 ENSG00000166260.10 COX11 166448 2.07e-14 -0.249355 4e-16 breast cancer 17_68557338 rs11655740 ENSG00000141338.13 ABCA8 -398054 1.44e-06 0.582565 7e-06 breast cancer 17_68904663 rs36059695 ENSG00000141338.13 ABCA8 -50729 7.67e-23 1.0549 6e-08 breast cancer 17_68904663 rs36059695 ENSG00000267659.5 LINC01482 312867 6.84e-05 0.746772 6e-08 breast cancer 17_74776908 rs62084913 ENSG00000109062.11 SLC9A3R1 27995 3.4e-06 -0.139541 9e-06 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 5.56e-29 -0.469483 5e-07 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 5.56e-29 -0.469483 6e-06 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 5.56e-29 -0.469483 4e-10 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 5.56e-29 -0.469483 1e-09 breast cancer 17_81211408 rs9913021 ENSG00000141577.13 CEP131 -11591 5.96e-12 -0.203923 2e-06 breast cancer 17_81211408 rs9913021 ENSG00000224877.3 NDUFAF8 -27831 5.68e-06 0.115707 2e-06 breast cancer 17_82597601 rs62079673 ENSG00000141580.15 WDR45B -50952 2.85e-18 0.238532 1e-06 breast cancer 17_82946434 rs898097 ENSG00000141560.14 FN3KRP 229751 6.27e-15 -0.405654 2e-06 breast cancer 18_26576054 rs7240205 ENSG00000263846.1 CIAPIN1P -23354 9.37e-05 0.235444 2e-08 breast cancer 19_17099805 rs7249698 ENSG00000099331.13 MYO9B 24024 3.44e-06 0.0931241 4e-07 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 5.18e-05 0.146082 1e-12 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 2.39e-14 -0.24783 1e-12 breast cancer 19_17278895 rs8170 ENSG00000127220.5 ABHD8 -31341 1.67e-11 0.233029 1e-12 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 4.78e-39 0.546957 1e-12 breast cancer 19_17278895 rs8170 ENSG00000130300.8 PLVAP -98455 2.46e-05 -0.174245 1e-12 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 5.18e-05 0.146082 7e-21 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 2.39e-14 -0.24783 7e-21 breast cancer 19_17278895 rs8170 ENSG00000127220.5 ABHD8 -31341 1.67e-11 0.233029 7e-21 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 4.78e-39 0.546957 7e-21 breast cancer 19_17278895 rs8170 ENSG00000130300.8 PLVAP -98455 2.46e-05 -0.174245 7e-21 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 5.18e-05 0.146082 4e-13 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 2.39e-14 -0.24783 4e-13 breast cancer 19_17278895 rs8170 ENSG00000127220.5 ABHD8 -31341 1.67e-11 0.233029 4e-13 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 4.78e-39 0.546957 4e-13 breast cancer 19_17278895 rs8170 ENSG00000130300.8 PLVAP -98455 2.46e-05 -0.174245 4e-13 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 5.18e-05 0.146082 2e-09 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 2.39e-14 -0.24783 2e-09 breast cancer 19_17278895 rs8170 ENSG00000127220.5 ABHD8 -31341 1.67e-11 0.233029 2e-09 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 4.78e-39 0.546957 2e-09 breast cancer 19_17278895 rs8170 ENSG00000130300.8 PLVAP -98455 2.46e-05 -0.174245 2e-09 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 5.18e-05 0.146082 2e-06 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 2.39e-14 -0.24783 2e-06 breast cancer 19_17278895 rs8170 ENSG00000127220.5 ABHD8 -31341 1.67e-11 0.233029 2e-06 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 4.78e-39 0.546957 2e-06 breast cancer 19_17278895 rs8170 ENSG00000130300.8 PLVAP -98455 2.46e-05 -0.174245 2e-06 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 5.18e-05 0.146082 9e-13 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 2.39e-14 -0.24783 9e-13 breast cancer 19_17278895 rs8170 ENSG00000127220.5 ABHD8 -31341 1.67e-11 0.233029 9e-13 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 4.78e-39 0.546957 9e-13 breast cancer 19_17278895 rs8170 ENSG00000130300.8 PLVAP -98455 2.46e-05 -0.174245 9e-13 breast cancer 19_17279482 rs4808075 ENSG00000160117.14 ANKLE1 -2163 4.42e-13 0.280875 4e-07 breast cancer 19_17279482 rs4808075 ENSG00000160117.14 ANKLE1 -2163 4.42e-13 0.280875 2e-09 breast cancer 19_17282085 rs8100241 ENSG00000130312.6 MRPL34 -10747 7.57e-06 0.118686 4e-08 breast cancer 19_17283116 rs56069439 ENSG00000160117.14 ANKLE1 1471 5.12e-13 0.281826 9e-09 breast cancer 19_17283116 rs56069439 ENSG00000160117.14 ANKLE1 1471 5.12e-13 0.281826 1e-32 breast cancer 19_17283116 rs56069439 ENSG00000160117.14 ANKLE1 1471 5.12e-13 0.281826 8e-19 breast cancer 19_17283315 rs2363956 ENSG00000130312.6 MRPL34 -9517 6.08e-06 0.119622 2e-06 breast cancer 19_17283315 rs2363956 ENSG00000130312.6 MRPL34 -9517 6.08e-06 0.119622 2e-08 breast cancer 19_17290595 rs67397200 ENSG00000160117.14 ANKLE1 8950 5.09e-11 0.255152 2e-08 breast cancer 19_17290595 rs67397200 ENSG00000160117.14 ANKLE1 8950 5.09e-11 0.255152 3e-37 breast cancer 19_17290595 rs67397200 ENSG00000160117.14 ANKLE1 8950 5.09e-11 0.255152 3e-17 breast cancer 19_18422832 rs7258465 ENSG00000105656.12 ELL -99295 4.53e-09 0.151013 3e-28 breast cancer 19_18422832 rs7258465 ENSG00000175489.9 LRRC25 25215 3.28e-10 -0.175211 3e-28 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 2.71e-11 -0.187005 6e-14 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 8.53e-09 0.149813 6e-14 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 2.71e-11 -0.187005 2e-31 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 8.53e-09 0.149813 2e-31 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 2.71e-11 -0.187005 6e-06 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 8.53e-09 0.149813 6e-06 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 2.71e-11 -0.187005 4e-15 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 8.53e-09 0.149813 4e-15 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 2.71e-11 -0.187005 5e-28 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 8.53e-09 0.149813 5e-28 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 2.71e-11 -0.187005 5e-15 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 8.53e-09 0.149813 5e-15 breast cancer 19_18522945 rs172032 ENSG00000175489.9 LRRC25 125328 0.000114606 -0.101342 1e-16 breast cancer 19_18522945 rs172032 ENSG00000105656.12 ELL 818 1.74e-10 0.152366 1e-16 breast cancer 19_19417997 rs1469713 ENSG00000187664.8 HAPLN4 155201 2.03e-15 0.444332 1e-10 breast cancer 19_19417997 rs1469713 ENSG00000250067.11 YJEFN3 -111367 1.74e-10 -0.144103 1e-10 breast cancer 19_19417997 rs1469713 ENSG00000178093.13 TSSK6 -97688 2.74e-06 0.202947 1e-10 breast cancer 19_19417997 rs1469713 ENSG00000064547.13 LPAR2 -210933 3.63e-08 -0.175665 1e-10 breast cancer 19_19417997 rs1469713 ENSG00000213996.12 TM6SF2 144606 9.64e-20 0.433851 1e-10 breast cancer 19_19434887 rs2965183 ENSG00000064547.13 LPAR2 -194043 3.63e-08 -0.175665 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000187664.8 HAPLN4 172091 2.03e-15 0.444332 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000213996.12 TM6SF2 161496 9.64e-20 0.433851 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000178093.13 TSSK6 -80798 2.74e-06 0.202947 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000250067.11 YJEFN3 -94477 1.74e-10 -0.144103 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000064547.13 LPAR2 -194043 3.63e-08 -0.175665 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000187664.8 HAPLN4 172091 2.03e-15 0.444332 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000213996.12 TM6SF2 161496 9.64e-20 0.433851 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000178093.13 TSSK6 -80798 2.74e-06 0.202947 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000250067.11 YJEFN3 -94477 1.74e-10 -0.144103 6e-12 breast cancer 19_19535463 rs2304098 ENSG00000178093.13 TSSK6 19778 1.73e-06 0.207778 2e-11 breast cancer 19_19535463 rs2304098 ENSG00000213996.12 TM6SF2 262072 1.53e-19 0.433541 2e-11 breast cancer 19_19535463 rs2304098 ENSG00000064547.13 LPAR2 -93467 2.72e-08 -0.177994 2e-11 breast cancer 19_19535463 rs2304098 ENSG00000187664.8 HAPLN4 272667 1.18e-14 0.434643 2e-11 breast cancer 19_19535463 rs2304098 ENSG00000250067.11 YJEFN3 6099 7.26e-11 -0.147603 2e-11 breast cancer 19_2226677 rs3815308 ENSG00000099840.13 IZUMO4 129808 1.8e-09 -0.140162 7e-06 breast cancer 19_43779080 rs1685191 ENSG00000104783.11 KCNN4 -2177 6.21e-12 -0.297998 4e-20 breast cancer 19_43779080 rs1685191 ENSG00000159871.14 LYPD5 -48126 7.25e-05 0.185892 4e-20 breast cancer 19_43779080 rs1685191 ENSG00000176222.8 ZNF404 -104971 3.31e-10 -0.197321 4e-20 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 3.66e-07 0.237368 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 6.02e-15 -0.242665 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.91e-06 -0.238126 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000104783.11 KCNN4 1104 3.22e-08 -0.242205 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000267191.1 ZNF45-AS1 -119640 0.000105715 -0.230706 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 3.66e-07 0.237368 1e-16 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 6.02e-15 -0.242665 1e-16 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.91e-06 -0.238126 1e-16 breast cancer 19_43782361 rs3760982 ENSG00000104783.11 KCNN4 1104 3.22e-08 -0.242205 1e-16 breast cancer 19_43782361 rs3760982 ENSG00000267191.1 ZNF45-AS1 -119640 0.000105715 -0.230706 1e-16 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 3.66e-07 0.237368 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 6.02e-15 -0.242665 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.91e-06 -0.238126 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000104783.11 KCNN4 1104 3.22e-08 -0.242205 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000267191.1 ZNF45-AS1 -119640 0.000105715 -0.230706 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 3.66e-07 0.237368 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 6.02e-15 -0.242665 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.91e-06 -0.238126 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000104783.11 KCNN4 1104 3.22e-08 -0.242205 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000267191.1 ZNF45-AS1 -119640 0.000105715 -0.230706 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 3.66e-07 0.237368 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 6.02e-15 -0.242665 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.91e-06 -0.238126 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000104783.11 KCNN4 1104 3.22e-08 -0.242205 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000267191.1 ZNF45-AS1 -119640 0.000105715 -0.230706 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000159871.14 LYPD5 -44845 3.66e-07 0.237368 8e-09 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 6.02e-15 -0.242665 8e-09 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.91e-06 -0.238126 8e-09 breast cancer 19_43782361 rs3760982 ENSG00000104783.11 KCNN4 1104 3.22e-08 -0.242205 8e-09 breast cancer 19_43782361 rs3760982 ENSG00000267191.1 ZNF45-AS1 -119640 0.000105715 -0.230706 8e-09 breast cancer 19_43919418 rs375066 ENSG00000267191.1 ZNF45-AS1 17417 5.4e-07 -0.297867 2e-14 breast cancer 19_43919418 rs375066 ENSG00000176222.8 ZNF404 35367 2.02e-38 -0.382889 2e-14 breast cancer 19_43919418 rs375066 ENSG00000159871.14 LYPD5 92212 1.69e-07 0.24499 2e-14 breast cancer 19_51869723 rs10411161 ENSG00000198093.10 ZNF649 -35317 6e-08 -0.244362 7e-06 breast cancer 19_51869723 rs10411161 ENSG00000161551.14 ZNF577 -18253 5.09e-09 -0.249253 7e-06 breast cancer 19_52526945 rs162277 ENSG00000198482.11 ZNF808 -707 2.36e-09 -0.165146 7e-06 breast cancer 2_111138666 rs17041869 ENSG00000153094.22 BCL2L11 19288 3e-05 -0.215795 2e-09 breast cancer 2_160772472 rs146071273 ENSG00000054219.10 LY75 867723 9.88e-05 0.338758 7e-06 breast cancer 2_160772472 rs146071273 ENSG00000153246.12 PLA2R1 709862 0.000156135 0.143838 7e-06 breast cancer 2_171568284 rs11675683 ENSG00000071967.11 CYBRD1 46037 2.27e-12 0.175806 4e-08 breast cancer 2_173348166 rs1550623 ENSG00000144354.13 CDCA7 -6654 3.11e-09 0.301028 1e-06 breast cancer 2_173348166 rs1550623 ENSG00000144354.13 CDCA7 -6654 3.11e-09 0.301028 6e-10 breast cancer 2_173348166 rs1550623 ENSG00000144354.13 CDCA7 -6654 3.11e-09 0.301028 5e-10 breast cancer 2_173348166 rs1550623 ENSG00000144354.13 CDCA7 -6654 3.11e-09 0.301028 3e-08 breast cancer 2_201258707 rs3769821 ENSG00000155749.12 FLACC1 -98691 5.53e-18 -0.413599 4e-18 breast cancer 2_201279205 rs10931936 ENSG00000155749.12 FLACC1 -78193 2.93e-17 -0.434584 6e-06 breast cancer 2_201279205 rs10931936 ENSG00000240344.8 PPIL3 389902 0.000239169 -0.20035 6e-06 breast cancer 2_201279205 rs10931936 ENSG00000064012.21 CASP8 45762 0.000164135 -0.135281 6e-06 breast cancer 2_201288355 rs1035142 ENSG00000155749.12 FLACC1 -69043 9.3e-21 -0.434444 3e-09 breast cancer 2_201288502 rs700635 ENSG00000155749.12 FLACC1 -68896 2.1e-17 -0.437113 5e-16 breast cancer 2_201288502 rs700635 ENSG00000064012.21 CASP8 55059 0.000166764 -0.135347 5e-16 breast cancer 2_201288502 rs700635 ENSG00000240344.8 PPIL3 399199 0.000189204 -0.203853 5e-16 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 0.00026918 -0.199391 7e-07 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 7.97e-05 -0.141998 7e-07 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 2.59e-17 -0.436742 7e-07 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 0.00026918 -0.199391 2e-16 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 7.97e-05 -0.141998 2e-16 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 2.59e-17 -0.436742 2e-16 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 0.00026918 -0.199391 9e-14 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 7.97e-05 -0.141998 9e-14 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 2.59e-17 -0.436742 9e-14 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 0.00026918 -0.199391 6e-24 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 7.97e-05 -0.141998 6e-24 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 2.59e-17 -0.436742 6e-24 breast cancer 2_201384985 rs2714486 ENSG00000155749.12 FLACC1 27587 4.59e-09 0.36837 7e-10 breast cancer 2_201502866 rs77688320 ENSG00000155749.12 FLACC1 145468 1.12e-07 0.361178 3e-09 breast cancer 2_212672736 rs9967727 ENSG00000178568.14 ERBB4 133895 1.65e-06 0.142815 4e-08 breast cancer 2_212678034 rs17331821 ENSG00000178568.14 ERBB4 139193 3.43e-05 0.139393 1e-06 breast cancer 2_24748307 rs6710503 ENSG00000115138.10 POMC -420596 0.000263279 0.224928 5e-06 breast cancer 2_24748307 rs6710503 ENSG00000084676.15 NCOA1 256393 2.1e-08 0.209592 5e-06 breast cancer 2_24906604 rs6725517 ENSG00000138092.10 CENPO 113221 2.3e-11 -0.178521 5e-11 breast cancer 2_24906604 rs6725517 ENSG00000224165.5 DNAJC27-AS1 -64786 4.5e-07 -0.145583 5e-11 breast cancer 2_24906604 rs6725517 ENSG00000138031.14 ADCY3 -13235 1.1e-20 -0.232927 5e-11 breast cancer 2_24906604 rs6725517 ENSG00000138092.10 CENPO 113221 2.3e-11 -0.178521 3e-12 breast cancer 2_24906604 rs6725517 ENSG00000224165.5 DNAJC27-AS1 -64786 4.5e-07 -0.145583 3e-12 breast cancer 2_24906604 rs6725517 ENSG00000138031.14 ADCY3 -13235 1.1e-20 -0.232927 3e-12 breast cancer 2_25068670 rs1971136 ENSG00000235072.2 ARNILA -307175 3.07e-05 0.2294 5e-09 breast cancer 2_25068670 rs1971136 ENSG00000138031.14 ADCY3 148831 9.71e-20 0.222525 5e-09 breast cancer 2_25068670 rs1971136 ENSG00000224165.5 DNAJC27-AS1 97280 1.36e-09 0.169894 5e-09 breast cancer 2_25068670 rs1971136 ENSG00000138092.10 CENPO 275287 3.95e-09 0.154506 5e-09 breast cancer 2_25222417 rs113953597 ENSG00000084710.13 EFR3B 180287 6.14e-09 0.134062 1e-08 breast cancer 2_25222417 rs113953597 ENSG00000138031.14 ADCY3 302578 0.000330416 0.103722 1e-08 breast cancer 2_28896719 rs67073037 ENSG00000213639.9 PPP1CB 145079 1.82e-05 -0.104475 5e-09 breast cancer 2_28896719 rs67073037 ENSG00000189350.12 TOGARAM2 -59892 0.00017646 -0.196822 5e-09 breast cancer 2_28896719 rs67073037 ENSG00000171103.10 TRMT61B 26418 8.81e-12 0.346527 5e-09 breast cancer 2_28896719 rs67073037 ENSG00000213639.9 PPP1CB 145079 1.82e-05 -0.104475 3e-06 breast cancer 2_28896719 rs67073037 ENSG00000189350.12 TOGARAM2 -59892 0.00017646 -0.196822 3e-06 breast cancer 2_28896719 rs67073037 ENSG00000171103.10 TRMT61B 26418 8.81e-12 0.346527 3e-06 breast cancer 2_28897867 rs4577244 ENSG00000213639.9 PPP1CB 146227 1.89e-05 -0.103534 2e-09 breast cancer 2_28897867 rs4577244 ENSG00000189350.12 TOGARAM2 -58744 6.26e-05 -0.208311 2e-09 breast cancer 2_28897867 rs4577244 ENSG00000171103.10 TRMT61B 27566 2.07e-10 0.321455 2e-09 breast cancer 2_41931164 rs17029056 ENSG00000205086.6 LINC02898 -23102 1.37e-07 -0.251221 4e-06 breast cancer 2_69945455 rs6756513 ENSG00000087338.4 GMCL1 115813 0.000206181 -0.122345 4e-07 breast cancer 2_69945455 rs6756513 ENSG00000124380.10 SNRNP27 51895 0.00016709 -0.109101 4e-07 breast cancer 20_34000289 rs2284378 ENSG00000078814.15 MYH7B -975114 0.000414755 0.0805376 1e-08 breast cancer 20_34000289 rs2284378 ENSG00000131069.19 ACSS2 -871857 0.000314844 0.130516 1e-08 breast cancer 20_34000289 rs2284378 ENSG00000101440.9 ASIP -194280 6.09e-05 -0.163771 1e-08 breast cancer 20_34000289 rs2284378 ENSG00000101460.12 MAP1LC3A -546565 3.49e-08 0.159248 1e-08 breast cancer 20_34002002 rs2300206 ENSG00000101440.9 ASIP -192567 6.09e-05 -0.163771 2e-08 breast cancer 20_34002002 rs2300206 ENSG00000131069.19 ACSS2 -870144 0.000314844 0.130516 2e-08 breast cancer 20_34002002 rs2300206 ENSG00000078814.15 MYH7B -973401 0.000414755 0.0805376 2e-08 breast cancer 20_34002002 rs2300206 ENSG00000101460.12 MAP1LC3A -544852 3.49e-08 0.159248 2e-08 breast cancer 20_34002002 rs2300206 ENSG00000101440.9 ASIP -192567 6.09e-05 -0.163771 6e-06 breast cancer 20_34002002 rs2300206 ENSG00000131069.19 ACSS2 -870144 0.000314844 0.130516 6e-06 breast cancer 20_34002002 rs2300206 ENSG00000078814.15 MYH7B -973401 0.000414755 0.0805376 6e-06 breast cancer 20_34002002 rs2300206 ENSG00000101460.12 MAP1LC3A -544852 3.49e-08 0.159248 6e-06 breast cancer 20_34131991 rs11907546 ENSG00000101440.9 ASIP -62578 1.66e-07 -0.205343 3e-09 breast cancer 20_34131991 rs11907546 ENSG00000101460.12 MAP1LC3A -414863 1.18e-07 0.147978 3e-09 breast cancer 20_34131991 rs11907546 ENSG00000101440.9 ASIP -62578 1.66e-07 -0.205343 3e-06 breast cancer 20_34131991 rs11907546 ENSG00000101460.12 MAP1LC3A -414863 1.18e-07 0.147978 3e-06 breast cancer 20_39051206 rs742276 ENSG00000101452.14 DHX35 88907 9e-10 -0.207296 9e-06 breast cancer 21_46360308 rs9808759 ENSG00000160299.16 PCNT 36186 1.39e-05 0.255223 4e-07 breast cancer 21_46360308 rs9808759 ENSG00000215424.9 MCM3AP-AS1 131091 0.000110932 0.248675 4e-07 breast cancer 21_46360308 rs9808759 ENSG00000160284.14 SPATC1L 175832 5.57e-07 -0.50314 4e-07 breast cancer 21_46360308 rs9808759 ENSG00000182362.13 YBEY 73971 5.79e-18 -0.83276 4e-07 breast cancer 21_46360308 rs9808759 ENSG00000160299.16 PCNT 36186 1.39e-05 0.255223 6e-09 breast cancer 21_46360308 rs9808759 ENSG00000215424.9 MCM3AP-AS1 131091 0.000110932 0.248675 6e-09 breast cancer 21_46360308 rs9808759 ENSG00000160284.14 SPATC1L 175832 5.57e-07 -0.50314 6e-09 breast cancer 21_46360308 rs9808759 ENSG00000182362.13 YBEY 73971 5.79e-18 -0.83276 6e-09 breast cancer 22_29225488 rs132390 ENSG00000186998.15 EMID1 19637 1.5e-05 0.352508 1e-08 breast cancer 22_29225488 rs132390 ENSG00000186998.15 EMID1 19637 1.5e-05 0.352508 3e-09 breast cancer 22_29225488 rs132390 ENSG00000186998.15 EMID1 19637 1.5e-05 0.352508 4e-07 breast cancer 22_29225488 rs132390 ENSG00000186998.15 EMID1 19637 1.5e-05 0.352508 3e-09 breast cancer 22_30027471 rs12537 ENSG00000184117.11 NIPSNAP1 446134 0.000232161 -0.0925862 9e-07 breast cancer 22_38172826 rs738321 ENSG00000184381.18 PLA2G6 -32864 6.45e-12 0.174132 7e-14 breast cancer 22_38172826 rs738321 ENSG00000185022.11 MAFF -29056 5.41e-08 -0.139627 7e-14 breast cancer 22_38172826 rs738321 ENSG00000198792.12 TMEM184B -100208 1.25e-10 -0.208581 7e-14 breast cancer 22_38172826 rs738321 ENSG00000184381.18 PLA2G6 -32864 6.45e-12 0.174132 1e-13 breast cancer 22_38172826 rs738321 ENSG00000185022.11 MAFF -29056 5.41e-08 -0.139627 1e-13 breast cancer 22_38172826 rs738321 ENSG00000198792.12 TMEM184B -100208 1.25e-10 -0.208581 1e-13 breast cancer 22_38174306 rs4820318 ENSG00000198792.12 TMEM184B -98728 5.87e-11 -0.211407 1e-13 breast cancer 22_38174306 rs4820318 ENSG00000184381.18 PLA2G6 -31384 8.1e-12 0.172761 1e-13 breast cancer 22_38174306 rs4820318 ENSG00000185022.11 MAFF -27576 2.63e-08 -0.142295 1e-13 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 4.35e-14 -0.687113 4e-06 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 4.35e-14 -0.687113 9e-14 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 4.35e-14 -0.687113 3e-17 breast cancer 22_41061455 rs141447235 ENSG00000183066.14 WBP2NL -937270 3.11e-05 -0.395375 2e-09 breast cancer 22_41323244 rs73176670 ENSG00000183066.14 WBP2NL -675481 0.000253525 -0.352861 1e-08 breast cancer 22_41642782 rs73161324 ENSG00000196236.12 XPNPEP3 785685 0.000209619 -0.263947 2e-09 breast cancer 22_41815785 rs8137282 ENSG00000226450.2 CYP2D8P -339216 0.000155266 0.47691 2e-07 breast cancer 22_42745087 rs4820477 ENSG00000100243.20 CYB5R3 95519 0.000182577 0.0904948 9e-07 breast cancer 3_100004736 rs9833888 ENSG00000206535.7 LNP1 -396663 1.82e-06 0.215946 5e-10 breast cancer 3_100004736 rs9833888 ENSG00000206535.7 LNP1 -396663 1.82e-06 0.215946 3e-10 breast cancer 3_100105841 rs9837602 ENSG00000206535.7 LNP1 -295558 1.53e-06 0.219659 1e-09 breast cancer 3_100149260 rs9289981 ENSG00000206535.7 LNP1 -252139 3.43e-05 0.162179 4e-10 breast cancer 3_14520620 rs1106333 ENSG00000144596.12 GRIP2 -35455 2.98e-05 0.267732 6e-08 breast cancer 3_150754603 rs2120596 ENSG00000244265.1 SIAH2-AS1 -7334 4.01e-05 0.645363 8e-14 breast cancer 3_150755819 rs60538652 ENSG00000244265.1 SIAH2-AS1 -6118 3.85e-05 0.596351 6e-07 breast cancer 3_150762029 rs1838337 ENSG00000244265.1 SIAH2-AS1 92 0.000156548 0.524578 1e-08 breast cancer 3_156645453 rs2136690 ENSG00000174912.7 METTL15P1 -69475 5.49e-05 -0.229786 4e-06 breast cancer 3_156645453 rs2136690 ENSG00000240875.5 LINC00886 -171609 8.34e-17 -0.334406 4e-06 breast cancer 3_156927968 rs7637701 ENSG00000174912.7 METTL15P1 213040 4.62e-10 -0.351052 1e-06 breast cancer 3_156927968 rs7637701 ENSG00000240875.5 LINC00886 110906 4.62e-32 -0.45694 1e-06 breast cancer 3_27468223 rs7619833 ENSG00000163491.16 NEK10 98763 6.97e-05 -0.172704 3e-45 breast cancer 3_46825376 rs6796502 ENSG00000188086.13 PRSS45P 80621 0.000112035 0.355902 7e-16 breast cancer 3_46825376 rs6796502 ENSG00000188086.13 PRSS45P 80621 0.000112035 0.355902 8e-07 breast cancer 3_46825376 rs6796502 ENSG00000188086.13 PRSS45P 80621 0.000112035 0.355902 2e-08 breast cancer 3_46825376 rs6796502 ENSG00000188086.13 PRSS45P 80621 0.000112035 0.355902 6e-15 breast cancer 3_46846708 rs56387622 ENSG00000188086.13 PRSS45P 101953 7.81e-06 0.398242 5e-19 breast cancer 3_46846708 rs56387622 ENSG00000261603.1 PRSS46P 110279 6.8e-06 0.38765 5e-19 breast cancer 3_47364189 rs146331761 ENSG00000164048.13 ZNF589 -876911 0.000795399 0.472975 5e-07 breast cancer 3_49129027 rs61729152 ENSG00000172037.13 LAMB2 -4091 1.6e-05 -0.374878 6e-06 breast cancer 3_49129027 rs61729152 ENSG00000164048.13 ZNF589 887927 0.000113599 0.711622 6e-06 breast cancer 3_63956021 rs3821902 ENSG00000163635.17 ATXN7 91464 6.34e-07 -0.163567 3e-12 breast cancer 3_63982224 rs1053338 ENSG00000163635.17 ATXN7 117667 1.85e-07 -0.168947 9e-09 breast cancer 3_63982224 rs1053338 ENSG00000163635.17 ATXN7 117667 1.85e-07 -0.168947 7e-10 breast cancer 3_63982224 rs1053338 ENSG00000163635.17 ATXN7 117667 1.85e-07 -0.168947 5e-11 breast cancer 3_63982224 rs1053338 ENSG00000163635.17 ATXN7 117667 1.85e-07 -0.168947 2e-07 breast cancer 3_86154659 rs9833726 ENSG00000239519.1 CADM2-AS1 126652 2.94e-06 -0.329663 6e-06 breast cancer 4_103450498 rs10016947 ENSG00000164039.14 BDH2 350615 6.7e-05 0.278348 9e-06 breast cancer 4_105140377 rs7679673 ENSG00000138777.19 PPA2 -333704 2.56e-05 -0.143218 1e-10 breast cancer 4_105435604 rs77928427 ENSG00000138777.19 PPA2 -38477 9.52e-09 -0.225814 3e-08 breast cancer 4_121185138 rs17051310; rs13116936 ENSG00000173376.13 NDNF 112117 9.68e-07 -0.415486 2e-06 breast cancer 4_121215608 rs4455437; rs921551 ENSG00000173376.13 142587 9.14e-06 0.179213 2e-06 breast cancer 4_57013626 rs4865169 ENSG00000084092.6 34987 2.18e-09 0.160669 7e-06 breast cancer 4_57013626 rs4865169 ENSG00000047315.15 POLR2B 34802 1.52e-06 -0.107802 7e-06 breast cancer 4_88322666 rs10022462 ENSG00000246375.2 PPM1K-DT 37724 3.63e-05 0.242319 2e-09 breast cancer 4_88322666 rs10022462 ENSG00000246375.2 PPM1K-DT 37724 3.63e-05 0.242319 3e-10 breast cancer 5_101043689 rs575018 ENSG00000113532.12 ST8SIA4 140423 1.71e-08 0.167764 7e-07 breast cancer 5_128098106 rs1112956 ENSG00000245937.7 SLC12A2-DT 14934 2.89e-43 0.654993 9e-06 breast cancer 5_128227188 rs36715 ENSG00000245937.7 SLC12A2-DT 144016 2.17e-18 0.385429 4e-06 breast cancer 5_132304843 rs6860806 ENSG00000072682.18 P4HA2 9528 1.59e-14 0.201075 8e-08 breast cancer 5_132304843 rs6860806 ENSG00000233006.6 MIR3936HG -64805 0.000141401 0.137295 8e-08 breast cancer 5_132304843 rs6860806 ENSG00000197375.12 SLC22A5 -64909 3.48e-10 -0.237532 8e-08 breast cancer 5_132304843 rs6860806 ENSG00000072682.18 P4HA2 9528 1.59e-14 0.201075 3e-08 breast cancer 5_132304843 rs6860806 ENSG00000233006.6 MIR3936HG -64805 0.000141401 0.137295 3e-08 breast cancer 5_132304843 rs6860806 ENSG00000197375.12 SLC22A5 -64909 3.48e-10 -0.237532 3e-08 breast cancer 5_132466255 rs2522057 ENSG00000158987.20 RAPGEF6 831019 0.000444836 0.0975562 9e-08 breast cancer 5_132466255 rs2522057 ENSG00000072682.18 P4HA2 170940 1.16e-20 -0.247358 9e-08 breast cancer 5_132466255 rs2522057 ENSG00000197375.12 SLC22A5 96503 2.82e-08 0.217173 9e-08 breast cancer 5_132466255 rs2522057 ENSG00000233006.6 MIR3936HG 96607 2.11e-06 -0.175247 9e-08 breast cancer 5_132466255 rs2522057 ENSG00000197536.11 IRF1-AS1 55619 2.71e-07 -0.152854 9e-08 breast cancer 5_132466255 rs2522057 ENSG00000158987.20 RAPGEF6 831019 0.000444836 0.0975562 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000072682.18 P4HA2 170940 1.16e-20 -0.247358 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000197375.12 SLC22A5 96503 2.82e-08 0.217173 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000233006.6 MIR3936HG 96607 2.11e-06 -0.175247 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000197536.11 IRF1-AS1 55619 2.71e-07 -0.152854 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000158987.20 RAPGEF6 831019 0.000444836 0.0975562 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000072682.18 P4HA2 170940 1.16e-20 -0.247358 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000197375.12 SLC22A5 96503 2.82e-08 0.217173 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000233006.6 MIR3936HG 96607 2.11e-06 -0.175247 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000197536.11 IRF1-AS1 55619 2.71e-07 -0.152854 3e-07 breast cancer 5_132497907 rs736801 ENSG00000197536.11 IRF1-AS1 87271 1.68e-07 0.158431 8e-08 breast cancer 5_132497907 rs736801 ENSG00000197375.12 SLC22A5 128155 3.01e-07 -0.204772 8e-08 breast cancer 5_132497907 rs736801 ENSG00000158987.20 RAPGEF6 862671 5.49e-05 -0.113974 8e-08 breast cancer 5_132497907 rs736801 ENSG00000072682.18 P4HA2 202592 1.52e-13 0.20324 8e-08 breast cancer 5_132497907 rs736801 ENSG00000233006.6 MIR3936HG 128259 1.04e-06 0.183856 8e-08 breast cancer 5_132497907 rs736801 ENSG00000169194.9 IL13 -158356 3.66e-05 -0.183195 8e-08 breast cancer 5_133071366 rs6596100 ENSG00000164403.14 SHROOM1 240468 0.000146107 0.0833119 2e-08 breast cancer 5_133071366 rs6596100 ENSG00000170606.14 HSPA4 19404 1.29e-12 0.16477 2e-08 breast cancer 5_133071366 rs6596100 ENSG00000164403.14 SHROOM1 240468 0.000146107 0.0833119 8e-09 breast cancer 5_133071366 rs6596100 ENSG00000170606.14 HSPA4 19404 1.29e-12 0.16477 8e-09 breast cancer 5_1453229 rs2617583 ENSG00000153395.9 LPCAT1 -70748 7.02e-05 0.101342 9e-07 breast cancer 5_149053986 rs250677 ENSG00000169247.11 SH3TC2 -9177 8.34e-10 0.138226 8e-06 breast cancer 5_154976135 rs6890610 ENSG00000277039.1 Metazoa_SRP 154192 6.22e-05 -0.204176 6e-06 breast cancer 5_154976135 rs6890610 ENSG00000170271.10 FAXDC2 116883 2.87e-05 -0.136808 6e-06 breast cancer 5_154976135 rs6890610 ENSG00000155508.13 CNOT8 118582 2.52e-20 -0.279261 6e-06 breast cancer 5_154976135 rs6890610 ENSG00000082516.8 GEMIN5 37926 3.26e-13 -0.215333 6e-06 breast cancer 5_159141388 rs139824696 ENSG00000245812.2 LINC02202 40905 0.000158325 0.151972 4e-06 breast cancer 5_50793817 rs26067 ENSG00000151883.17 PARP8 127918 1.89e-05 0.118563 2e-08 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 1.76e-06 0.262225 1e-08 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 1.76e-06 0.262225 1e-39 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 1.76e-06 0.262225 3e-36 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 1.76e-06 0.262225 7e-20 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 1.76e-06 0.262225 5e-09 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 1.76e-06 0.262225 3e-27 breast cancer 5_56737113 rs1862626 ENSG00000155542.11 SETD9 -172147 2.81e-06 0.255088 4e-12 breast cancer 5_56926293 rs11957276 ENSG00000155542.11 SETD9 17033 2.38e-05 0.257834 5e-11 breast cancer 5_56977866 rs10036895 ENSG00000095015.5 MAP3K1 162292 2.51e-05 0.105532 2e-12 breast cancer 5_56977866 rs10036895 ENSG00000155542.11 SETD9 68606 2.41e-28 0.551991 2e-12 breast cancer 5_81820020 rs72774916 ENSG00000152348.15 ATG10 -152005 1.52e-05 0.421887 2e-08 breast cancer 5_81972251 rs111549985 ENSG00000186468.12 RPS23 -306326 3.2e-46 -0.390775 6e-12 breast cancer 5_81972251 rs111549985 ENSG00000152348.15 ATG10 226 1.76e-98 1.16264 6e-12 breast cancer 5_81972251 rs111549985 ENSG00000205464.11 ATP6AP1L -307211 7.08e-66 0.8585 6e-12 breast cancer 5_82161539 rs2407064 ENSG00000186468.12 RPS23 -117038 1.59e-47 0.387546 3e-08 breast cancer 5_82161539 rs2407064 ENSG00000152348.15 ATG10 189514 5.66e-83 -1.07939 3e-08 breast cancer 5_82161539 rs2407064 ENSG00000205464.11 ATP6AP1L -117923 1.06e-67 -0.85017 3e-08 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 1.64e-81 -1.09037 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 1.25e-69 -0.872753 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 3.81e-49 0.399247 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 1.64e-81 -1.09037 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 1.25e-69 -0.872753 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 3.81e-49 0.399247 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 1.64e-81 -1.09037 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 1.25e-69 -0.872753 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 3.81e-49 0.399247 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 1.64e-81 -1.09037 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 1.25e-69 -0.872753 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 3.81e-49 0.399247 2e-12 breast cancer 5_82340549 rs2407156 ENSG00000205464.11 ATP6AP1L 61087 7.13e-60 0.790448 2e-06 breast cancer 5_82340549 rs2407156 ENSG00000152348.15 ATG10 368524 1.4e-45 0.838559 2e-06 breast cancer 5_82340549 rs2407156 ENSG00000186468.12 RPS23 61972 5.36e-36 -0.335116 2e-06 breast cancer 6_122394099 rs74392007 ENSG00000025156.12 HSF2 -5447 5.48e-11 -0.328756 3e-07 breast cancer 6_122554525 rs76092474 ENSG00000025156.12 HSF2 154979 1.64e-10 -0.323369 3e-06 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 1.31e-34 -0.627653 2e-12 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 1.31e-34 -0.627653 4e-08 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 1.31e-34 -0.627653 8e-10 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 1.31e-34 -0.627653 3e-12 breast cancer 6_25710343 rs68006638 ENSG00000111913.17 RIPOR2 774291 0.000122347 -0.357809 2e-07 breast cancer 6_25710343 rs68006638 ENSG00000186470.13 BTN3A2 -654816 1.83e-31 -1.00446 2e-07 breast cancer 6_25874195 rs13198474 ENSG00000111913.17 RIPOR2 938143 9.68e-05 -0.365363 2e-07 breast cancer 6_25874195 rs13198474 ENSG00000186470.13 BTN3A2 -490964 9.39e-31 -1.0004 2e-07 breast cancer 6_26175638 rs17598658 ENSG00000186470.13 BTN3A2 -189521 3.02e-40 -1.0113 2e-09 breast cancer 6_26463346 rs13195401 ENSG00000197903.7 H2BC12 -683452 0.000669235 0.27813 2e-09 breast cancer 6_26463346 rs13195401 ENSG00000186470.13 BTN3A2 98187 1.71e-53 -1.11306 2e-09 breast cancer 6_26993501 rs34546498 ENSG00000224843.6 LINC00240 36509 0.000630754 0.340989 9e-10 breast cancer 6_26993501 rs34546498 ENSG00000186470.13 BTN3A2 628342 2.56e-53 -1.13348 9e-10 breast cancer 6_27307055 rs56114371 ENSG00000216901.1 ZNF603P -869133 6.93e-08 0.636575 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000224843.6 LINC00240 350063 0.000422218 0.345334 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000197062.11 ZSCAN26 -959955 3.25e-06 -0.242206 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000137185.11 ZSCAN9 -917831 6.38e-06 0.35065 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000186470.13 BTN3A2 941896 9.42e-51 -1.09158 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000182477.5 OR2B8P -747110 3.36e-05 0.435951 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000197279.3 ZNF165 -774076 6.42e-06 -0.521425 2e-09 breast cancer 6_27457865 rs34196306 ENSG00000197062.11 ZSCAN26 -809145 9.38e-07 -0.2627 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000197279.3 ZNF165 -623266 9.16e-07 -0.58352 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000137185.11 ZSCAN9 -767021 9.69e-06 0.354418 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000182477.5 OR2B8P -596300 3.27e-06 0.502884 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000189298.13 ZKSCAN3 -892049 0.000943305 -0.238068 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000216901.1 ZNF603P -718323 3.34e-07 0.621859 1e-09 breast cancer 6_27873148 rs45509595 ENSG00000137185.11 ZSCAN9 -351738 4.31e-06 0.359952 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000216901.1 ZNF603P -303040 1.49e-08 0.673015 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000197062.11 ZSCAN26 -393862 9.93e-09 -0.299 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000182477.5 OR2B8P -181017 1.37e-06 0.510215 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000189298.13 ZKSCAN3 -476766 0.0004532 -0.246847 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000197279.3 ZNF165 -207983 4.15e-08 -0.635853 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000219392.1 ZNF602P -242480 0.000715508 -0.460881 5e-09 breast cancer 6_28106103 rs34662244 ENSG00000182477.5 OR2B8P 51938 1.65e-06 0.500281 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000189298.13 ZKSCAN3 -243811 0.000635639 -0.237643 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000197062.11 ZSCAN26 -160907 2.18e-09 -0.30793 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000219392.1 ZNF602P -9525 0.000241616 -0.493512 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000216901.1 ZNF603P -70085 6.67e-09 0.680402 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000137185.11 ZSCAN9 -118783 1.95e-06 0.36791 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000197279.3 ZNF165 24972 3.86e-08 -0.629645 3e-09 breast cancer 6_28364364 rs13214023 ENSG00000182477.5 OR2B8P 310199 3.23e-06 0.490534 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000189298.13 ZKSCAN3 14450 0.000297363 -0.253619 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000216901.1 ZNF603P 188176 1.22e-08 0.674543 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000197062.11 ZSCAN26 97354 1.37e-09 -0.314305 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000137185.11 ZSCAN9 139478 2.13e-06 0.369719 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000197279.3 ZNF165 283233 4.53e-08 -0.63185 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000219392.1 ZNF602P 248736 0.000275652 -0.493192 1e-09 breast cancer 6_28958443 rs9257408 ENSG00000176933.5 TOB2P1 739809 2.02e-05 -0.236216 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000226314.7 ZKSCAN8P1 796662 1.61e-05 0.171994 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000235109.7 ZSCAN31 602172 3.92e-06 0.163614 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000197935.6 ZNF311 -46817 0.000179786 0.143482 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000197062.11 ZSCAN26 691433 6.42e-05 -0.0997022 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000197279.3 ZNF165 877312 6.28e-06 -0.249438 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000204713.10 TRIM27 34454 5.26e-05 0.104216 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000187987.9 ZSCAN23 514941 8.29e-07 0.18565 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 9.01e-10 0.344009 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000176933.5 TOB2P1 739809 2.02e-05 -0.236216 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000226314.7 ZKSCAN8P1 796662 1.61e-05 0.171994 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000235109.7 ZSCAN31 602172 3.92e-06 0.163614 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000197935.6 ZNF311 -46817 0.000179786 0.143482 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000197062.11 ZSCAN26 691433 6.42e-05 -0.0997022 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000197279.3 ZNF165 877312 6.28e-06 -0.249438 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000204713.10 TRIM27 34454 5.26e-05 0.104216 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000187987.9 ZSCAN23 514941 8.29e-07 0.18565 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 9.01e-10 0.344009 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000176933.5 TOB2P1 739809 2.02e-05 -0.236216 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000226314.7 ZKSCAN8P1 796662 1.61e-05 0.171994 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000235109.7 ZSCAN31 602172 3.92e-06 0.163614 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000197935.6 ZNF311 -46817 0.000179786 0.143482 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000197062.11 ZSCAN26 691433 6.42e-05 -0.0997022 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000197279.3 ZNF165 877312 6.28e-06 -0.249438 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000204713.10 TRIM27 34454 5.26e-05 0.104216 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000187987.9 ZSCAN23 514941 8.29e-07 0.18565 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 9.01e-10 0.344009 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000176933.5 TOB2P1 739809 2.02e-05 -0.236216 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000226314.7 ZKSCAN8P1 796662 1.61e-05 0.171994 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000235109.7 ZSCAN31 602172 3.92e-06 0.163614 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000197935.6 ZNF311 -46817 0.000179786 0.143482 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000197062.11 ZSCAN26 691433 6.42e-05 -0.0997022 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000197279.3 ZNF165 877312 6.28e-06 -0.249438 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000204713.10 TRIM27 34454 5.26e-05 0.104216 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000187987.9 ZSCAN23 514941 8.29e-07 0.18565 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 9.01e-10 0.344009 5e-08 breast cancer 6_29280372 rs3130834 ENSG00000204644.9 ZFP57 -400738 3.67e-13 0.86303 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000239257.1 RPL23AP1 -446510 0.000140373 0.442531 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000204622.11 HLA-J -725599 0.000300471 -0.402547 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000230795.3 HLA-K -646806 6.79e-05 -0.514604 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000204632.11 HLA-G -546595 7.71e-06 -0.567076 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000281831.1 HCP5B -593411 1.44e-14 0.880975 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000228078.1 HLA-U -653729 2.93e-06 0.635943 5e-09 breast cancer 6_29388554 rs9257809 ENSG00000204622.11 HLA-J -617417 0.000100824 -0.421309 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000204644.9 ZFP57 -292556 4.26e-16 0.933883 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000227262.3 HCG4B -538419 0.0002422 0.459581 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000239257.1 RPL23AP1 -338328 0.00024225 0.415732 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000204623.9 ZNRD1ASP -672699 0.000344733 -0.197442 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000230795.3 HLA-K -538624 2.47e-05 -0.530092 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000281831.1 HCP5B -485229 8.78e-16 0.894494 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000204632.11 HLA-G -438413 2.45e-07 -0.635093 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000228078.1 HLA-U -545547 1.03e-05 0.585225 3e-08 breast cancer 6_29509637 rs1233480 ENSG00000281831.1 HCP5B -364146 3.62e-10 0.587916 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000204632.11 HLA-G -317330 1.4e-05 -0.446378 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000204644.9 ZFP57 -171473 4.32e-08 0.533475 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000204623.9 ZNRD1ASP -551616 2.61e-05 -0.192462 5e-08 breast cancer 6_29693039 rs3116813 ENSG00000204632.11 HLA-G -133928 1.68e-08 -0.692876 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000281831.1 HCP5B -180744 5.78e-19 0.982734 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000146112.11 PPP1R18 -994856 5.36e-05 -0.195645 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000227262.3 HCG4B -233934 1.96e-05 0.533629 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000230795.3 HLA-K -234139 2.12e-06 -0.594995 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204623.9 ZNRD1ASP -368214 1.79e-05 -0.236118 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000239257.1 RPL23AP1 -33843 5e-05 0.459013 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204622.11 HLA-J -312932 1.67e-05 -0.465907 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204644.9 ZFP57 11929 7.86e-17 0.956269 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000228078.1 HLA-U -241062 2.34e-06 0.625891 6e-07 breast cancer 6_29785031 rs147680653 ENSG00000228078.1 HLA-U -149070 2.36e-06 0.628577 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000239257.1 RPL23AP1 58149 4.37e-05 0.464613 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204623.9 ZNRD1ASP -276222 1.31e-05 -0.240905 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000227262.3 HCG4B -141942 1.99e-05 0.535715 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000146112.11 PPP1R18 -902864 0.000134167 -0.18598 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204632.11 HLA-G -41936 1.06e-08 -0.70539 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000281831.1 HCP5B -88752 1.97e-19 0.999258 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000230795.3 HLA-K -142147 3.1e-06 -0.588204 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000137312.14 FLOT1 -957702 9.18e-15 0.335492 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204622.11 HLA-J -220940 2.88e-05 -0.45508 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204644.9 ZFP57 103921 3.53e-17 0.970679 1e-06 breast cancer 6_29882943 rs1611579 ENSG00000281831.1 HCP5B 9160 4.06e-22 1.03738 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204644.9 ZFP57 201833 3.2e-16 0.918251 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000228078.1 HLA-U -51158 8.02e-07 0.639449 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000137312.14 FLOT1 -859790 1.09e-12 0.301683 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000239257.1 RPL23AP1 156061 6.91e-06 0.496984 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000146112.11 PPP1R18 -804952 6.25e-06 -0.213644 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204632.11 HLA-G 55976 2.76e-09 -0.713105 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000230795.3 HLA-K -44235 1.43e-06 -0.591773 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204623.9 ZNRD1ASP -178310 2.17e-06 -0.254605 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000227262.3 HCG4B -44030 2.66e-05 0.51403 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204622.11 HLA-J -123028 1.58e-05 -0.457223 8e-07 breast cancer 6_30003183 rs3094146 ENSG00000146112.11 PPP1R18 -684712 1.28e-05 -0.205724 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000227262.3 HCG4B 76210 5.04e-05 0.494475 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000204632.11 HLA-G 176216 2.71e-09 -0.710717 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000281831.1 HCP5B 129400 1.67e-22 1.0422 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000239257.1 RPL23AP1 276301 1.29e-05 0.480525 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000230795.3 HLA-K 76005 1.4e-06 -0.589988 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000228078.1 HLA-U 69082 1.29e-06 0.625279 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000066379.14 POLR1H -58458 0.00026224 -0.237995 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000204622.11 HLA-J -2788 1.49e-05 -0.456868 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000204644.9 ZFP57 322073 4.94e-16 0.909301 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000137312.14 FLOT1 -739550 8.39e-13 0.301964 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000204623.9 ZNRD1ASP -58070 1.57e-06 -0.257024 7e-07 breast cancer 6_30107326 rs2523992 ENSG00000281831.1 HCP5B 233543 1.37e-08 0.462002 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000239257.1 RPL23AP1 380444 1.03e-06 0.395869 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000204644.9 ZFP57 426216 5.23e-06 0.385496 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000137312.14 FLOT1 -635407 1.61e-10 0.200042 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000230795.3 HLA-K 180148 1.11e-05 -0.39689 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000204623.9 ZNRD1ASP 46073 6.25e-12 -0.267728 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000146112.11 PPP1R18 -580569 5.19e-05 -0.140849 2e-07 breast cancer 6_30365728 rs3094054 ENSG00000137312.14 FLOT1 -377005 1.88e-16 0.349785 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000281831.1 HCP5B 491945 4.67e-16 0.894551 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204536.13 CCHCR1 -792510 4.72e-12 0.444739 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000146112.11 PPP1R18 -322167 3.38e-07 -0.243423 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000277402.1 MIR6891 -989588 9.79e-05 -0.474332 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204540.10 PSORS1C1 -749022 1.29e-08 -0.67083 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000239257.1 RPL23AP1 638846 1.84e-05 0.479661 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000066379.14 POLR1H 304087 3.41e-06 -0.306308 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204525.16 HLA-C -906377 6.76e-05 0.330739 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000137411.16 VARS2 -548477 0.000187398 -0.330433 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000230795.3 HLA-K 438550 4.87e-07 -0.624327 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000227262.3 HCG4B 438755 3.37e-05 0.513683 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204632.11 HLA-G 538761 5.88e-08 -0.66033 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000228078.1 HLA-U 431627 1.93e-06 0.624961 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204644.9 ZFP57 684618 5.18e-15 0.892913 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204623.9 ZNRD1ASP 304475 3.42e-05 -0.226061 1e-07 breast cancer 6_30374976 rs115707823 ENSG00000204536.13 CCHCR1 -783262 1.63e-07 0.279235 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000229274.1 LINC02829 877467 0.000282286 0.326446 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000204644.9 ZFP57 693866 2.04e-06 0.453787 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000204623.9 ZNRD1ASP 313723 0.000245065 -0.164375 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000281831.1 HCP5B 501193 5.61e-10 0.56842 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000228078.1 HLA-U 440875 4.01e-05 0.443425 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000227262.3 HCG4B 448003 3.2e-06 0.471881 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000146112.11 PPP1R18 -312919 6.17e-06 -0.177419 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000239257.1 RPL23AP1 648094 0.00050602 0.320388 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000137312.14 FLOT1 -367757 4.17e-07 0.180387 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000204536.13 CCHCR1 -783262 1.63e-07 0.279235 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000229274.1 LINC02829 877467 0.000282286 0.326446 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000204644.9 ZFP57 693866 2.04e-06 0.453787 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000204623.9 ZNRD1ASP 313723 0.000245065 -0.164375 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000281831.1 HCP5B 501193 5.61e-10 0.56842 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000228078.1 HLA-U 440875 4.01e-05 0.443425 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000227262.3 HCG4B 448003 3.2e-06 0.471881 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000146112.11 PPP1R18 -312919 6.17e-06 -0.177419 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000239257.1 RPL23AP1 648094 0.00050602 0.320388 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000137312.14 FLOT1 -367757 4.17e-07 0.180387 5e-07 breast cancer 6_30473526 rs3132615 ENSG00000137312.14 FLOT1 -269207 3.97e-16 0.327342 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204540.10 PSORS1C1 -641224 6.43e-08 -0.60396 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204632.11 HLA-G 646559 4.22e-06 -0.532025 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204644.9 ZFP57 792416 4.26e-12 0.752954 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000228078.1 HLA-U 539425 1.43e-05 0.539556 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000230795.3 HLA-K 546348 2.66e-06 -0.551795 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000227262.3 HCG4B 546553 3.29e-05 0.486305 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204525.16 HLA-C -798579 8.57e-05 0.308323 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000146112.11 PPP1R18 -214369 8.73e-08 -0.241092 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000281831.1 HCP5B 599743 3.52e-13 0.762784 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000137411.16 VARS2 -440679 5.76e-05 -0.335998 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000066379.14 POLR1H 411885 6.12e-06 -0.282141 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204536.13 CCHCR1 -684712 2.75e-13 0.443001 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000239257.1 RPL23AP1 746644 7e-05 0.421558 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000277402.1 MIR6891 -881790 1.81e-05 -0.492656 2e-06 breast cancer 6_30576624 rs3132610 ENSG00000137411.16 VARS2 -337581 2.01e-06 -0.400338 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000137312.14 FLOT1 -166109 6.2e-18 0.349613 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000230795.3 HLA-K 649446 5.07e-07 -0.596363 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204538.3 PSORS1C2 -562726 0.000299096 -0.418804 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000227262.3 HCG4B 649651 1.68e-05 0.509667 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000239257.1 RPL23AP1 849742 6.36e-05 0.428937 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204536.13 CCHCR1 -581614 3.01e-12 0.42916 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000277402.1 MIR6891 -778692 1.92e-05 -0.497018 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204644.9 ZFP57 895514 1.84e-12 0.774169 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204623.9 ZNRD1ASP 515371 0.000306266 -0.188814 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204516.9 MICB -918257 1.91e-06 0.48243 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000281831.1 HCP5B 702841 7.22e-16 0.850553 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204525.16 HLA-C -695481 1.22e-05 0.346728 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000228078.1 HLA-U 642523 6.04e-05 0.505477 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204540.10 PSORS1C1 -538126 7.16e-08 -0.608997 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204632.11 HLA-G 749657 4.04e-07 -0.591511 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000066379.14 POLR1H 514983 3.08e-05 -0.263513 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000146112.11 PPP1R18 -111271 2.02e-08 -0.255358 1e-06 breast cancer 6_30682249 rs9262142 ENSG00000204525.16 HLA-C -589856 1.29e-05 0.344398 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204536.13 CCHCR1 -475989 1.46e-12 0.433411 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000066379.14 POLR1H 620608 4.56e-05 -0.256947 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204538.3 PSORS1C2 -457101 0.000162645 -0.434817 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000230795.3 HLA-K 755071 8.92e-07 -0.581507 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000137411.16 VARS2 -231956 2.73e-06 -0.393687 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000227262.3 HCG4B 755276 3.34e-05 0.489767 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204632.11 HLA-G 855282 2.85e-07 -0.596707 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000228078.1 HLA-U 748148 8.14e-05 0.494828 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000199332.1 Y_RNA -720001 0.000248304 0.412819 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204540.10 PSORS1C1 -432501 1.05e-08 -0.643209 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204516.9 MICB -812632 3.84e-06 0.466531 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000146112.11 PPP1R18 -5646 1.14e-07 -0.240872 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000281831.1 HCP5B 808466 3.43e-16 0.856163 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000277402.1 MIR6891 -673067 1.3e-05 -0.504825 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000137312.14 FLOT1 -60484 1.55e-18 0.35414 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000239257.1 RPL23AP1 955367 9.4e-05 0.417509 3e-06 breast cancer 6_30793795 rs3129984 ENSG00000137411.16 VARS2 -120410 3.05e-07 -0.411825 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000228078.1 HLA-U 859694 0.000137904 0.459975 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204540.10 PSORS1C1 -320955 3.57e-10 -0.674575 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000066379.14 POLR1H 732154 0.000149492 -0.229771 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204632.11 HLA-G 966828 4.7e-08 -0.608661 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204536.13 CCHCR1 -364443 2.07e-12 0.413503 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000281831.1 HCP5B 920012 6.06e-16 0.815765 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000230795.3 HLA-K 866617 6.02e-07 -0.56693 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204538.3 PSORS1C2 -345555 1.06e-05 -0.486341 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000277402.1 MIR6891 -561521 1.4e-05 -0.483117 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000225851.1 HLA-S -588493 0.000369124 -0.38288 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000146112.11 PPP1R18 105900 2.26e-07 -0.226011 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204525.16 HLA-C -478310 9.82e-06 0.335194 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204516.9 MICB -701086 2.78e-06 0.454349 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000137312.14 FLOT1 51062 4.39e-18 0.335894 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000227262.3 HCG4B 866822 9.38e-05 0.443298 8e-06 breast cancer 6_31347004 rs115392158 ENSG00000204338.8 CYP21A1P -658685 9.17e-10 -0.404456 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000244731.7 C4A -635020 5.53e-11 -0.355673 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000204536.13 CCHCR1 188766 7.16e-05 0.155169 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000277402.1 MIR6891 -8312 8.88e-08 -0.386052 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000204538.3 PSORS1C2 207654 2.7e-08 -0.398113 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000204540.10 PSORS1C1 232254 4.31e-17 -0.580025 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000204528.3 PSORS1C3 169105 4.59e-05 -0.287816 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000213760.10 ATP6V1G2 -199844 0.000278291 -0.187777 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000137312.14 FLOT1 604271 1.71e-05 0.112023 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000228789.6 HCG22 293554 1.72e-15 -0.542808 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000204338.8 CYP21A1P -658685 9.17e-10 -0.404456 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000244731.7 C4A -635020 5.53e-11 -0.355673 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000204536.13 CCHCR1 188766 7.16e-05 0.155169 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000277402.1 MIR6891 -8312 8.88e-08 -0.386052 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000204538.3 PSORS1C2 207654 2.7e-08 -0.398113 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000204540.10 PSORS1C1 232254 4.31e-17 -0.580025 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000204528.3 PSORS1C3 169105 4.59e-05 -0.287816 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000213760.10 ATP6V1G2 -199844 0.000278291 -0.187777 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000137312.14 FLOT1 604271 1.71e-05 0.112023 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000228789.6 HCG22 293554 1.72e-15 -0.542808 9e-06 breast cancer 6_32699696 rs147527678 ENSG00000198502.5 HLA-DRB5 169409 3e-06 -0.355368 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000224389.8 C4B 684934 1.78e-06 -0.265958 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000231852.6 CYP21A2 661431 3.27e-07 0.346735 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000232629.8 HLA-DQB2 -63838 4.88e-10 0.487002 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000179344.16 HLA-DQB1 31313 3.49e-16 -0.54723 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000223534.1 HLA-DQB1-AS1 39341 0.000124191 -0.219015 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000244731.7 C4A 717672 6.38e-13 -0.432532 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000196301.3 HLA-DRB9 226196 0.000191083 0.277383 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000196735.11 HLA-DQA1 71517 2.1e-05 -0.227978 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000248290.1 TNXA 687224 4.56e-08 -0.409566 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000204338.8 CYP21A1P 694007 1.88e-10 -0.46791 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000198502.5 HLA-DRB5 169409 3e-06 -0.355368 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000224389.8 C4B 684934 1.78e-06 -0.265958 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000231852.6 CYP21A2 661431 3.27e-07 0.346735 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000232629.8 HLA-DQB2 -63838 4.88e-10 0.487002 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000179344.16 HLA-DQB1 31313 3.49e-16 -0.54723 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000223534.1 HLA-DQB1-AS1 39341 0.000124191 -0.219015 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000244731.7 C4A 717672 6.38e-13 -0.432532 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000196301.3 HLA-DRB9 226196 0.000191083 0.277383 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000196735.11 HLA-DQA1 71517 2.1e-05 -0.227978 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000248290.1 TNXA 687224 4.56e-08 -0.409566 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000204338.8 CYP21A1P 694007 1.88e-10 -0.46791 5e-07 breast cancer 6_33272092 rs17215231 ENSG00000235863.3 B3GALT4 -5040 2.69e-07 0.248249 9e-13 breast cancer 6_33272092 rs17215231 ENSG00000231500.6 RPS18 44 1.28e-113 -0.879431 9e-13 breast cancer 6_43259403 rs111342015 ENSG00000112667.12 DNPH1 29919 3.2e-21 -0.368207 9e-08 breast cancer 7_100437651 rs117911427 ENSG00000221838.9 AP4M1 335710 3.83e-05 -0.422253 7e-06 breast cancer 7_100437651 rs117911427 ENSG00000121716.20 PILRB 85475 8.94e-13 0.880742 7e-06 breast cancer 7_100437651 rs117911427 ENSG00000242294.6 STAG3L5P 101239 2e-11 0.843071 7e-06 breast cancer 7_100437651 rs117911427 ENSG00000085514.15 PILRA 64206 7.61e-09 0.806693 7e-06 breast cancer 7_102478605 rs369574511 ENSG00000161036.12 LRWD1 13676 7.88e-33 -0.325887 2e-07 breast cancer 7_102478605 rs369574511 ENSG00000233297.4 RASA4DP -211864 5.62e-06 0.284768 2e-07 breast cancer 7_102478605 rs369574511 ENSG00000228049.7 POLR2J2 -193024 0.000127798 -0.241781 2e-07 breast cancer 7_102478605 rs369574511 ENSG00000160991.15 ORAI2 45499 9.81e-07 0.136999 2e-07 breast cancer 7_102478605 rs369574511 ENSG00000105808.17 RASA4 -138152 1.18e-06 0.279094 2e-07 breast cancer 7_102478605 rs369574511 ENSG00000170667.14 RASA4B -39176 4.12e-05 -0.218381 2e-07 breast cancer 7_103251337 rs6946892 ENSG00000105808.17 RASA4 634580 8.88e-06 0.247995 1e-07 breast cancer 7_103251337 rs6946892 ENSG00000228049.7 POLR2J2 579708 2.88e-08 0.336696 1e-07 breast cancer 7_103251337 rs6946892 ENSG00000267368.1 UPK3BL1 608546 2.55e-05 0.26783 1e-07 breast cancer 7_103251337 rs6946892 ENSG00000161040.16 FBXL13 176494 2.26e-05 -0.220842 1e-07 breast cancer 7_130989722 rs68056147 ENSG00000231721.6 LINC-PINT -120373 0.000138992 0.0850293 5e-13 breast cancer 7_144351809 rs62485509 ENSG00000213214.4 ARHGEF35 163414 2.16e-05 0.334003 4e-12 breast cancer 7_144351809 rs62485509 ENSG00000170356.8 OR2A20P 98852 2.88e-07 0.39274 4e-12 breast cancer 7_144351809 rs62485509 ENSG00000204959.4 ARHGEF34P 64843 6.93e-06 -0.330805 4e-12 breast cancer 7_144377836 rs720475 ENSG00000213214.4 189441 9.91e-05 0.271159 2e-11 breast cancer 7_144377836 rs720475 ENSG00000204959.4 90870 3.02e-07 -0.332306 2e-11 breast cancer 7_144377836 rs720475 ENSG00000170356.8 124879 3.13e-07 0.346385 2e-11 breast cancer 7_144377836 rs720475 ENSG00000213214.4 189441 9.91e-05 0.271159 7e-11 breast cancer 7_144377836 rs720475 ENSG00000204959.4 90870 3.02e-07 -0.332306 7e-11 breast cancer 7_144377836 rs720475 ENSG00000170356.8 124879 3.13e-07 0.346385 7e-11 breast cancer 7_144377836 rs720475 ENSG00000213214.4 189441 9.91e-05 0.271159 4e-10 breast cancer 7_144377836 rs720475 ENSG00000204959.4 90870 3.02e-07 -0.332306 4e-10 breast cancer 7_144377836 rs720475 ENSG00000170356.8 124879 3.13e-07 0.346385 4e-10 breast cancer 7_144377836 rs720475 ENSG00000213214.4 189441 9.91e-05 0.271159 7e-12 breast cancer 7_144377836 rs720475 ENSG00000204959.4 90870 3.02e-07 -0.332306 7e-12 breast cancer 7_144377836 rs720475 ENSG00000170356.8 124879 3.13e-07 0.346385 7e-12 breast cancer 7_144377836 rs720475 ENSG00000213214.4 189441 9.91e-05 0.271159 1e-11 breast cancer 7_144377836 rs720475 ENSG00000204959.4 90870 3.02e-07 -0.332306 1e-11 breast cancer 7_144377836 rs720475 ENSG00000170356.8 124879 3.13e-07 0.346385 1e-11 breast cancer 7_144377836 rs720475 ENSG00000213214.4 189441 9.91e-05 0.271159 1e-08 breast cancer 7_144377836 rs720475 ENSG00000204959.4 90870 3.02e-07 -0.332306 1e-08 breast cancer 7_144377836 rs720475 ENSG00000170356.8 124879 3.13e-07 0.346385 1e-08 breast cancer 7_38712494 rs7794030 ENSG00000006715.15 -219900 1.94e-06 -0.17515 1e-06 breast cancer 7_38712494 rs7794030 ENSG00000164556.7 25457 5.91e-05 -0.207692 1e-06 breast cancer 7_38728314 rs1468348 ENSG00000006715.15 -204080 7.57e-07 -0.179172 5e-06 breast cancer 7_38728314 rs1468348 ENSG00000164556.7 41277 1.75e-05 -0.218555 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000277053.4 -541323 1.96e-18 -0.771483 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000123965.13 -197743 1.83e-12 0.774336 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000263001.5 38706 3.12e-23 0.500707 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000196275.13 -155178 2.4e-26 0.815405 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000277072.4 -194237 2.24e-09 0.453158 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000184616.8 -216883 4.82e-07 0.545623 5e-06 breast cancer 7_92001306 rs6964587 ENSG00000127914.16 60439 8.26e-08 0.104825 9e-11 breast cancer 7_92001306 rs6964587 ENSG00000188693.7 -133298 1.86e-05 0.213077 9e-11 breast cancer 7_92001306 rs6964587 ENSG00000127914.16 60439 8.26e-08 0.104825 3e-12 breast cancer 7_92001306 rs6964587 ENSG00000188693.7 -133298 1.86e-05 0.213077 3e-12 breast cancer 7_92001306 rs6964587 ENSG00000127914.16 60439 8.26e-08 0.104825 5e-07 breast cancer 7_92001306 rs6964587 ENSG00000188693.7 -133298 1.86e-05 0.213077 5e-07 breast cancer 7_92001306 rs6964587 ENSG00000127914.16 60439 8.26e-08 0.104825 1e-06 breast cancer 7_92001306 rs6964587 ENSG00000188693.7 -133298 1.86e-05 0.213077 1e-06 breast cancer 7_94484487 rs17268829 ENSG00000127990.15 -171722 7.14e-38 0.324059 4e-15 breast cancer 7_94484487 rs17268829 ENSG00000242265.5 -171838 0.00017478 0.102224 4e-15 breast cancer 7_94484487 rs17268829 ENSG00000127990.15 -171722 7.14e-38 0.324059 5e-13 breast cancer 7_94484487 rs17268829 ENSG00000242265.5 -171838 0.00017478 0.102224 5e-13 breast cancer 7_94758031 rs10269006 ENSG00000127990.15 101822 4.07e-08 0.139856 5e-07 breast cancer 8_103189173 rs12548629 ENSG00000164932.12 -182342 7.4e-06 0.149535 3e-07 breast cancer 8_220692 rs66823261 ENSG00000223508.5 -11444 5.68e-05 0.210022 6e-09 breast cancer 8_220692 rs66823261 ENSG00000272812.1 -12427 1.04e-07 0.228592 6e-09 breast cancer 8_220692 rs66823261 ENSG00000272240.1 -14195 1.5e-28 0.556734 6e-09 breast cancer 8_220692 rs66823261 ENSG00000172748.13 -11540 1.37e-05 -0.123718 6e-09 breast cancer 8_220692 rs66823261 ENSG00000273402.1 -16353 3.66e-18 0.435496 6e-09 breast cancer 8_220692 rs66823261 ENSG00000223508.5 -11444 5.68e-05 0.210022 3e-08 breast cancer 8_220692 rs66823261 ENSG00000272812.1 -12427 1.04e-07 0.228592 3e-08 breast cancer 8_220692 rs66823261 ENSG00000272240.1 -14195 1.5e-28 0.556734 3e-08 breast cancer 8_220692 rs66823261 ENSG00000172748.13 -11540 1.37e-05 -0.123718 3e-08 breast cancer 8_220692 rs66823261 ENSG00000273402.1 -16353 3.66e-18 0.435496 3e-08 breast cancer 8_220692 rs66823261 ENSG00000223508.5 -11444 5.68e-05 0.210022 3e-07 breast cancer 8_220692 rs66823261 ENSG00000272812.1 -12427 1.04e-07 0.228592 3e-07 breast cancer 8_220692 rs66823261 ENSG00000272240.1 -14195 1.5e-28 0.556734 3e-07 breast cancer 8_220692 rs66823261 ENSG00000172748.13 -11540 1.37e-05 -0.123718 3e-07 breast cancer 8_220692 rs66823261 ENSG00000273402.1 -16353 3.66e-18 0.435496 3e-07 breast cancer 8_220692 rs66823261 ENSG00000223508.5 -11444 5.68e-05 0.210022 1e-08 breast cancer 8_220692 rs66823261 ENSG00000272812.1 -12427 1.04e-07 0.228592 1e-08 breast cancer 8_220692 rs66823261 ENSG00000272240.1 -14195 1.5e-28 0.556734 1e-08 breast cancer 8_220692 rs66823261 ENSG00000172748.13 -11540 1.37e-05 -0.123718 1e-08 breast cancer 8_220692 rs66823261 ENSG00000273402.1 -16353 3.66e-18 0.435496 1e-08 breast cancer 8_22634616 rs6558174 ENSG00000241852.9 35015 2.69e-07 0.176868 3e-06 breast cancer 8_22634616 rs6558174 ENSG00000158941.16 29984 1.27e-05 0.100392 3e-06 breast cancer 8_30372068 rs7834448 ENSG00000254152.1 21721 3.38e-05 0.248661 7e-06 breast cancer 8_30372068 rs7834448 ENSG00000254109.5 -13333 4.53e-14 -0.306981 7e-06 breast cancer 8_36990191 rs10086016 ENSG00000183779.6 -705560 1.64e-05 -0.177126 1e-08 breast cancer 8_36992428 rs4286946 ENSG00000183779.6 -703323 5.93e-06 -0.200533 9e-22 breast cancer 8_36995695 rs10096213 ENSG00000183779.6 -700056 1.08e-05 -0.18093 3e-09 breast cancer 8_36997193 rs10092900 ENSG00000183779.6 -698558 1.08e-05 -0.181353 2e-17 breast cancer 8_37000965 rs13365225 ENSG00000183779.6 -694786 1.08e-05 -0.181353 7e-06 breast cancer 8_37000965 rs13365225 ENSG00000183779.6 -694786 1.08e-05 -0.181353 1e-08 breast cancer 8_37000965 rs13365225 ENSG00000183779.6 -694786 1.08e-05 -0.181353 1e-20 breast cancer 8_37000965 rs13365225 ENSG00000183779.6 -694786 1.08e-05 -0.181353 1e-10 breast cancer 8_37000965 rs13365225 ENSG00000183779.6 -694786 1.08e-05 -0.181353 1e-23 breast cancer 9_103912867 rs718857 ENSG00000136824.18 -181393 8.82e-10 -0.171931 2e-06 breast cancer 9_104094512 rs4742903 ENSG00000136824.18 252 1.32e-21 -0.268215 3e-08 breast cancer 9_104094512 rs4742903 ENSG00000270332.1 1439 4.16e-05 0.189581 3e-08 breast cancer 9_104094512 rs4742903 ENSG00000136824.18 252 1.32e-21 -0.268215 2e-07 breast cancer 9_104094512 rs4742903 ENSG00000270332.1 1439 4.16e-05 0.189581 2e-07 breast cancer 9_126634155 rs10760444 ENSG00000136944.17 19712 0.000178947 0.148586 9e-09 breast cancer 9_126634155 rs10760444 ENSG00000136944.17 19712 0.000178947 0.148586 8e-14 breast cancer 9_133463535 rs3124765 ENSG00000160325.14 3570 8.18e-08 -0.223976 2e-06 breast cancer 9_133463535 rs3124765 ENSG00000187616.4 -65077 3.37e-05 0.207601 2e-06 breast cancer 9_133463535 rs3124765 ENSG00000148290.9 106859 2.22e-12 0.299567 2e-06 breast cancer 9_133463535 rs3124765 ENSG00000197859.9 -68629 3.47e-05 0.13929 2e-06 breast cancer 9_34723038 rs10814138 ENSG00000205108.5 -6429 1.21e-05 -0.211115 3e-06