DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE breast cancer 1_121121848 rs369304377 ENSG00000226067.6 LINC00623 169409 7.04e-06 -0.527691 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000223345.3 H2BP1 4591 4.77e-08 0.440486 2e-29 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.18e-05 -0.431008 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 8.58e-06 -0.505837 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 9.85e-07 0.386139 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.18e-05 -0.431008 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 8.58e-06 -0.505837 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 9.85e-07 0.386139 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.18e-05 -0.431008 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 8.58e-06 -0.505837 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 9.85e-07 0.386139 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.18e-05 -0.431008 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 8.58e-06 -0.505837 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 9.85e-07 0.386139 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.18e-05 -0.431008 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 8.58e-06 -0.505837 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 9.85e-07 0.386139 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.18e-05 -0.431008 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 8.58e-06 -0.505837 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 9.85e-07 0.386139 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.18e-05 -0.431008 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 8.58e-06 -0.505837 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 9.85e-07 0.386139 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.18e-05 -0.431008 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 8.58e-06 -0.505837 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 9.85e-07 0.386139 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000188610.12 FAM72B 353276 1.18e-05 -0.431008 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 8.58e-06 -0.505837 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000223345.3 H2BP1 421558 9.85e-07 0.386139 7e-10 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.32e-05 0.339041 2e-07 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.32e-05 0.339041 6e-10 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.32e-05 0.339041 8e-09 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.32e-05 0.339041 5e-09 breast cancer 1_155212052 rs2974935 ENSG00000169231.13 THBS3 4071 1.19e-07 0.368237 2e-07 breast cancer 1_155212373 rs2075570 ENSG00000169231.13 THBS3 4392 1.19e-07 0.368237 5e-06 breast cancer 1_16013277 rs1763604 ENSG00000186510.11 CLCNKA -5598 9.15e-09 -0.433892 7e-09 breast cancer 1_91555907 rs12134245 ENSG00000097046.12 CDC7 55014 2.4e-05 -0.231248 4e-06 breast cancer 10_121904429 rs7899628 ENSG00000226864.2 ATE1-AS1 -23883 1.84e-08 -0.53386 9e-10 breast cancer 10_27080233 rs7918232 ENSG00000230445.4 LRRC37A6P -179222 1.33e-05 0.526782 8e-06 breast cancer 10_5752689 rs55910451 ENSG00000057608.16 GDI2 -89443 1.19e-08 -0.401872 4e-07 breast cancer 10_92172529 rs72807246 ENSG00000228701.1 TNKS2-DT 374238 6.85e-07 0.893296 3e-06 breast cancer 11_111765903 rs643506 ENSG00000137713.15 PPP2R1B -524 1.23e-08 -0.363323 2e-07 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 5.01e-05 -0.291578 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 5.01e-05 -0.291578 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 5.01e-05 -0.291578 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 5.01e-05 -0.291578 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 5.01e-05 -0.291578 2e-12 breast cancer 11_65935052 rs617791 ENSG00000172803.17 SNX32 101411 9.11e-06 -0.331424 7e-06 breast cancer 11_69138652 rs72932523 ENSG00000162341.16 TPCN2 89755 4.31e-06 0.423601 1e-09 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 3.01e-20 0.7256 3e-12 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 3.01e-20 0.7256 1e-12 breast cancer 15_50402109 rs4774565 ENSG00000244879.6 GABPB1-AS1 46700 2.14e-06 -0.471034 2e-06 breast cancer 15_75516399 rs8027365 ENSG00000140400.16 MAN2C1 148245 1.45e-19 0.6054 1e-07 breast cancer 15_90965985 rs77554484 ENSG00000258725.1 PRC1-AS1 -6875 2.82e-11 -0.579977 1e-15 breast cancer 15_90965985 rs77554484 ENSG00000166965.12 RCCD1 10189 5e-06 0.238309 1e-15 breast cancer 15_90968837 rs2290203 ENSG00000258725.1 PRC1-AS1 -4023 2.14e-05 -0.31848 2e-19 breast cancer 15_90968837 rs2290203 ENSG00000258725.1 PRC1-AS1 -4023 2.14e-05 -0.31848 8e-10 breast cancer 15_90968837 rs2290203 ENSG00000258725.1 PRC1-AS1 -4023 2.14e-05 -0.31848 4e-08 breast cancer 17_30884649 rs7223535 ENSG00000176390.11 CRLF3 59873 2.93e-06 0.318428 4e-10 breast cancer 17_30887862 rs113934718 ENSG00000176390.11 CRLF3 63086 2.93e-06 0.318428 1e-08 breast cancer 17_30894259 rs62070652 ENSG00000176390.11 CRLF3 69483 2.93e-06 0.318428 1e-06 breast cancer 17_30894259 rs62070652 ENSG00000176390.11 CRLF3 69483 2.93e-06 0.318428 6e-09 breast cancer 17_45394123 rs4763 ENSG00000264070.1 DND1P1 -191748 1.09e-10 0.932475 2e-08 breast cancer 17_45394123 rs4763 ENSG00000204650.14 LINC02210 -226205 7.74e-24 0.997023 2e-08 breast cancer 17_45394123 rs4763 ENSG00000263503.1 MAPK8IP1P2 -208217 1.86e-10 0.854577 2e-08 breast cancer 17_45394123 rs4763 ENSG00000214401.4 KANSL1-AS1 -799453 2.15e-12 0.901625 2e-08 breast cancer 17_45394123 rs4763 ENSG00000262500.1 MAPK8IP1P1 -849483 6.92e-12 0.849971 2e-08 breast cancer 17_45394123 rs4763 ENSG00000214425.7 LRRC37A4P -156212 3.36e-21 -1.19722 2e-08 breast cancer 17_45394123 rs4763 ENSG00000176681.14 LRRC37A -898610 2.29e-05 0.502476 2e-08 breast cancer 17_45941122 rs62061734 ENSG00000176681.14 LRRC37A -351611 8.98e-09 0.635355 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000232300.1 FAM215B -621673 3.63e-05 0.591313 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214425.7 LRRC37A4P 390787 4.42e-30 -1.29196 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000238083.7 LRRC37A2 -570389 2.89e-18 0.875347 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000204652.6 RPS26P8 332551 3.14e-06 0.689933 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000263503.1 MAPK8IP1P2 338782 2.2e-15 0.978471 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000264070.1 DND1P1 355251 3.04e-18 1.13347 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000262500.1 MAPK8IP1P1 -302484 1.48e-17 0.966811 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000185829.17 ARL17A -638560 1.34e-08 0.679714 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000204650.14 LINC02210 320794 1.59e-42 1.13085 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000073969.18 NSF -649547 1.5e-05 -0.231433 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214401.4 KANSL1-AS1 -252454 2.72e-22 1.10242 8e-12 breast cancer 17_46751565 rs199533 ENSG00000214401.4 KANSL1-AS1 557989 3.97e-27 1.15732 5e-08 breast cancer 17_46751565 rs199533 ENSG00000232300.1 FAM215B 188770 2.68e-06 0.653169 5e-08 breast cancer 17_46751565 rs199533 ENSG00000238083.7 LRRC37A2 240054 1.12e-19 0.88444 5e-08 breast cancer 17_46751565 rs199533 ENSG00000262500.1 MAPK8IP1P1 507959 6.35e-24 1.06643 5e-08 breast cancer 17_46751565 rs199533 ENSG00000185829.17 ARL17A 171883 6.67e-10 0.716907 5e-08 breast cancer 17_46751565 rs199533 ENSG00000176681.14 LRRC37A 458832 1.75e-07 0.572738 5e-08 breast cancer 17_46751565 rs199533 ENSG00000073969.18 NSF 160896 4.3e-06 -0.240039 5e-08 breast cancer 17_46751565 rs199533 ENSG00000108379.9 WNT3 -81493 2.2e-05 0.376416 5e-08 breast cancer 17_46788237 rs199498 ENSG00000214401.4 KANSL1-AS1 594661 7.22e-19 1.00671 2e-08 breast cancer 17_46788237 rs199498 ENSG00000262500.1 MAPK8IP1P1 544631 2.9e-14 0.86119 2e-08 breast cancer 17_46788237 rs199498 ENSG00000176681.14 LRRC37A 495504 7.69e-08 0.582246 2e-08 breast cancer 17_46788237 rs199498 ENSG00000185829.17 ARL17A 208555 3.05e-08 0.646474 2e-08 breast cancer 17_46788237 rs199498 ENSG00000238083.7 LRRC37A2 276726 4.64e-12 0.710999 2e-08 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 1.41e-09 -0.511923 5e-12 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 1.41e-09 -0.511923 8e-09 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 1.41e-09 -0.511923 1e-08 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 1.41e-09 -0.511923 2e-13 breast cancer 17_55132413 rs2787486 ENSG00000166263.13 STXBP4 163627 3.8e-08 -0.415137 6e-29 breast cancer 17_55132413 rs2787486 ENSG00000166263.13 STXBP4 163627 3.8e-08 -0.415137 2e-34 breast cancer 17_55135212 rs2628317 ENSG00000166263.13 STXBP4 166426 4.2e-08 -0.442076 4e-16 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 5.76e-12 0.573667 9e-13 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 5.76e-12 0.573667 2e-09 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 5.76e-12 0.573667 4e-13 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 5.76e-12 0.573667 7e-21 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 5.76e-12 0.573667 1e-12 breast cancer 19_17278895 rs8170 ENSG00000160117.14 ANKLE1 -2750 5.76e-12 0.573667 2e-06 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 1.43e-05 -0.242212 1e-16 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 1.43e-05 -0.242212 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 1.43e-05 -0.242212 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 1.43e-05 -0.242212 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 1.43e-05 -0.242212 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 1.43e-05 -0.242212 8e-09 breast cancer 19_43919418 rs375066 ENSG00000176222.8 ZNF404 35367 5.13e-12 -0.388959 2e-14 breast cancer 2_201288355 rs1035142 ENSG00000155749.12 FLACC1 -69043 1.24e-05 -0.426556 3e-09 breast cancer 2_24906604 rs6725517 ENSG00000224165.5 DNAJC27-AS1 -64786 3.57e-05 -0.260247 5e-11 breast cancer 2_24906604 rs6725517 ENSG00000224165.5 DNAJC27-AS1 -64786 3.57e-05 -0.260247 3e-12 breast cancer 2_25068670 rs1971136 ENSG00000224165.5 DNAJC27-AS1 97280 1.95e-05 0.263521 5e-09 breast cancer 2_41931164 rs17029056 ENSG00000205086.6 LINC02898 -23102 3.53e-06 -0.529816 4e-06 breast cancer 2_69900097 rs6716937 ENSG00000244617.2 ASPRV1 -62165 2.75e-05 -0.236291 4e-07 breast cancer 21_46360308 rs9808759 ENSG00000182362.13 YBEY 73971 1.47e-05 -0.657473 6e-09 breast cancer 21_46360308 rs9808759 ENSG00000182362.13 YBEY 73971 1.47e-05 -0.657473 4e-07 breast cancer 22_30168182 rs139059349 ENSG00000214491.8 SEC14L6 -378500 1.38e-05 1.46307 2e-07 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 7.42e-06 -0.709127 3e-17 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 7.42e-06 -0.709127 9e-14 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 7.42e-06 -0.709127 4e-06 breast cancer 3_156927968 rs7637701 ENSG00000240875.5 LINC00886 110906 3.87e-06 -0.354715 1e-06 breast cancer 3_46825376 rs6796502 ENSG00000178038.16 ALS2CL 131672 4.99e-06 -0.472952 2e-08 breast cancer 3_46825376 rs6796502 ENSG00000178038.16 ALS2CL 131672 4.99e-06 -0.472952 7e-16 breast cancer 3_46825376 rs6796502 ENSG00000178038.16 ALS2CL 131672 4.99e-06 -0.472952 6e-15 breast cancer 3_46825376 rs6796502 ENSG00000178038.16 ALS2CL 131672 4.99e-06 -0.472952 8e-07 breast cancer 3_46846708 rs56387622 ENSG00000178038.16 ALS2CL 153004 5.9e-05 -0.38417 5e-19 breast cancer 4_103450498 rs10016947 ENSG00000164039.14 BDH2 350615 2.81e-07 0.670121 9e-06 breast cancer 4_105435604 rs77928427 ENSG00000138777.19 PPA2 -38477 6.4e-05 -0.311652 3e-08 breast cancer 5_128098106 rs1112956 ENSG00000245937.7 SLC12A2-DT 14934 1.73e-10 0.514243 9e-06 breast cancer 5_132304843 rs6860806 ENSG00000072682.18 P4HA2 9528 2.66e-05 0.227319 8e-08 breast cancer 5_132304843 rs6860806 ENSG00000072682.18 P4HA2 9528 2.66e-05 0.227319 3e-08 breast cancer 5_132466255 rs2522057 ENSG00000072682.18 P4HA2 170940 2.32e-06 -0.25645 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000072682.18 P4HA2 170940 2.32e-06 -0.25645 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000072682.18 P4HA2 170940 2.32e-06 -0.25645 9e-08 breast cancer 5_132497907 rs736801 ENSG00000072682.18 P4HA2 202592 1.18e-06 0.26884 8e-08 breast cancer 5_1453229 rs2617583 ENSG00000142319.17 SLC6A3 7799 1.99e-08 -0.488398 9e-07 breast cancer 5_56977866 rs10036895 ENSG00000155542.11 SETD9 68606 7.32e-08 0.481173 2e-12 breast cancer 5_81972251 rs111549985 ENSG00000205464.11 ATP6AP1L -307211 7.82e-19 0.738398 6e-12 breast cancer 5_81972251 rs111549985 ENSG00000152348.15 ATG10 226 3.02e-30 0.923935 6e-12 breast cancer 5_81972251 rs111549985 ENSG00000186468.12 RPS23 -306326 7.35e-12 -0.33935 6e-12 breast cancer 5_82161539 rs2407064 ENSG00000186468.12 RPS23 -117038 3.24e-11 0.321802 3e-08 breast cancer 5_82161539 rs2407064 ENSG00000152348.15 ATG10 189514 3.84e-26 -0.859076 3e-08 breast cancer 5_82161539 rs2407064 ENSG00000205464.11 ATP6AP1L -117923 2.45e-19 -0.72653 3e-08 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 4.94e-28 -0.901864 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 2.08e-11 0.332959 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 8.65e-20 -0.752302 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 4.94e-28 -0.901864 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 2.08e-11 0.332959 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 8.65e-20 -0.752302 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 4.94e-28 -0.901864 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 2.08e-11 0.332959 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 8.65e-20 -0.752302 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 4.94e-28 -0.901864 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 2.08e-11 0.332959 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 8.65e-20 -0.752302 4e-09 breast cancer 5_82340549 rs2407156 ENSG00000152348.15 ATG10 368524 7.82e-14 0.701798 2e-06 breast cancer 5_82340549 rs2407156 ENSG00000186468.12 RPS23 61972 3.89e-10 -0.320866 2e-06 breast cancer 5_82340549 rs2407156 ENSG00000205464.11 ATP6AP1L 61087 1.17e-18 0.750509 2e-06 breast cancer 6_25874195 rs13198474 ENSG00000186470.13 BTN3A2 -490964 1.95e-05 -0.993772 2e-07 breast cancer 6_26175638 rs17598658 ENSG00000186470.13 BTN3A2 -189521 1.04e-08 -1.13594 2e-09 breast cancer 6_26463346 rs13195401 ENSG00000186470.13 BTN3A2 98187 9.99e-13 -1.05354 2e-09 breast cancer 6_26993501 rs34546498 ENSG00000186470.13 BTN3A2 628342 3.12e-12 -1.07482 9e-10 breast cancer 6_26993501 rs34546498 ENSG00000112812.15 PRSS16 -254200 8.96e-05 0.506318 9e-10 breast cancer 6_27307055 rs56114371 ENSG00000186470.13 BTN3A2 941896 3.12e-12 -1.07482 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000220721.1 OR1F12P -766261 2.9e-05 0.790177 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000197062.11 ZSCAN26 -959955 1.15e-05 -0.375451 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000182477.5 OR2B8P -747110 6.26e-05 0.797738 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000112812.15 PRSS16 59354 8.96e-05 0.506318 2e-09 breast cancer 6_27457865 rs34196306 ENSG00000182477.5 OR2B8P -596300 6.26e-05 0.797738 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000197062.11 ZSCAN26 -809145 1.15e-05 -0.375451 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000112812.15 PRSS16 210164 8.96e-05 0.506318 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000220721.1 OR1F12P -615451 2.9e-05 0.790177 1e-09 breast cancer 6_27873148 rs45509595 ENSG00000182477.5 OR2B8P -181017 4.74e-05 0.786951 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000197062.11 ZSCAN26 -393862 9.89e-06 -0.367298 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000220721.1 OR1F12P -200168 3.6e-05 0.759295 5e-09 breast cancer 6_28106103 rs34662244 ENSG00000182477.5 OR2B8P 51938 4.74e-05 0.786951 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000197062.11 ZSCAN26 -160907 9.89e-06 -0.367298 3e-09 breast cancer 6_28106103 rs34662244 ENSG00000220721.1 OR1F12P 32787 3.6e-05 0.759295 3e-09 breast cancer 6_28364364 rs13214023 ENSG00000220721.1 OR1F12P 291048 3.6e-05 0.759295 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000182477.5 OR2B8P 310199 4.74e-05 0.786951 1e-09 breast cancer 6_28364364 rs13214023 ENSG00000197062.11 ZSCAN26 97354 9.89e-06 -0.367298 1e-09 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 8.72e-06 0.515293 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000197935.6 ZNF311 -46817 0.000100762 0.23529 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 8.72e-06 0.515293 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000197935.6 ZNF311 -46817 0.000100762 0.23529 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 8.72e-06 0.515293 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000197935.6 ZNF311 -46817 0.000100762 0.23529 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000216901.1 ZNF603P 782255 8.72e-06 0.515293 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000197935.6 ZNF311 -46817 0.000100762 0.23529 5e-08 breast cancer 6_29280372 rs3130834 ENSG00000281831.1 HCP5B -593411 2.6e-06 0.96272 5e-09 breast cancer 6_29388554 rs9257809 ENSG00000204644.9 ZFP57 -292556 8.17e-05 0.694858 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000281831.1 HCP5B -485229 5.56e-07 1.03117 3e-08 breast cancer 6_29693039 rs3116813 ENSG00000281831.1 HCP5B -180744 4.38e-08 1.10551 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204644.9 ZFP57 11929 2.88e-05 0.727273 6e-07 breast cancer 6_29785031 rs147680653 ENSG00000281831.1 HCP5B -88752 4.38e-08 1.10551 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204644.9 ZFP57 103921 2.88e-05 0.727273 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000137312.14 FLOT1 -957702 4.06e-06 0.457977 1e-06 breast cancer 6_29882943 rs1611579 ENSG00000137312.14 FLOT1 -859790 1.15e-06 0.468236 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000281831.1 HCP5B 9160 6.06e-09 1.13453 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204644.9 ZFP57 201833 2.15e-05 0.718141 8e-07 breast cancer 6_30003183 rs3094146 ENSG00000204644.9 ZFP57 322073 2.15e-05 0.718141 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000281831.1 HCP5B 129400 6.06e-09 1.13453 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000137312.14 FLOT1 -739550 1.15e-06 0.468236 7e-07 breast cancer 6_30107326 rs2523992 ENSG00000230795.3 HLA-K 180148 4.83e-06 -0.676564 2e-07 breast cancer 6_30365728 rs3094054 ENSG00000281831.1 HCP5B 491945 7.58e-06 0.884912 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000137312.14 FLOT1 -377005 1.49e-06 0.457751 1e-07 breast cancer 6_30374976 rs115707823 ENSG00000281831.1 HCP5B 501193 8.3e-05 0.653529 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000281831.1 HCP5B 501193 8.3e-05 0.653529 5e-07 breast cancer 6_30473526 rs3132615 ENSG00000137312.14 FLOT1 -269207 2e-08 0.48155 2e-06 breast cancer 6_30576624 rs3132610 ENSG00000204644.9 ZFP57 895514 5.31e-05 0.637028 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000137312.14 FLOT1 -166109 6.74e-09 0.508973 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000281831.1 HCP5B 702841 1.94e-05 0.797852 1e-06 breast cancer 6_30682249 rs9262142 ENSG00000137312.14 FLOT1 -60484 9.26e-09 0.501781 3e-06 breast cancer 6_30793795 rs3129984 ENSG00000137312.14 FLOT1 51062 1.6e-08 0.49458 8e-06 breast cancer 6_32699696 rs147527678 ENSG00000204338.8 CYP21A1P 694007 4.11e-05 -0.462744 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000232629.8 HLA-DQB2 -63838 1.4e-05 0.633086 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000204338.8 CYP21A1P 694007 4.11e-05 -0.462744 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000232629.8 HLA-DQB2 -63838 1.4e-05 0.633086 5e-07 breast cancer 6_33272092 rs17215231 ENSG00000231500.6 RPS18 44 3.72e-14 -0.684789 9e-13 breast cancer 6_43259403 rs111342015 ENSG00000112667.12 DNPH1 29919 8.31e-08 -0.427815 9e-08 breast cancer 7_102478605 rs369574511 ENSG00000161036.12 LRWD1 13676 5.04e-27 -0.753537 2e-07 breast cancer 7_102478605 rs369574511 ENSG00000168255.19 POLR2J3 -94051 2.63e-05 -0.4513 2e-07 breast cancer 7_144351809 rs62485509 ENSG00000204959.4 ARHGEF34P 64843 7.53e-06 -0.577934 4e-12 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 2.4e-06 -0.526397 2e-11 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 2.4e-06 -0.526397 7e-11 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 2.4e-06 -0.526397 1e-08 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 2.4e-06 -0.526397 7e-12 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 2.4e-06 -0.526397 4e-10 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 2.4e-06 -0.526397 1e-11 breast cancer 7_74696373 rs74910854 ENSG00000263001.5 GTF2I 38706 1.14e-07 0.352112 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000196275.13 GTF2IRD2 -155178 6.8e-07 0.642957 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000277053.4 GTF2IP1 -541323 3.68e-06 -0.788569 5e-06 breast cancer 8_22634616 rs6558174 ENSG00000158941.16 CCAR2 29984 3.2e-07 0.236139 3e-06 breast cancer 9_104094512 rs4742903 ENSG00000136824.18 SMC2 252 9.18e-06 -0.256324 2e-07 breast cancer 9_104094512 rs4742903 ENSG00000136824.18 SMC2 252 9.18e-06 -0.256324 3e-08