DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
breast cancer	1_121121848	rs369304377	ENSG00000223345.3	H2BP1	4591	4.12e-09	0.495235	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000270392.2	PFN1P2	687796	1.1e-05	0.312331	2e-29
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.14e-06	0.406527	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.14e-06	0.406527	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.14e-06	0.406527	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.14e-06	0.406527	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.14e-06	0.406527	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.14e-06	0.406527	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.14e-06	0.406527	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.14e-06	0.406527	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	4.14e-06	0.406527	9e-13
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.02e-07	0.386741	8e-09
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.02e-07	0.386741	6e-10
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.02e-07	0.386741	5e-09
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.02e-07	0.386741	2e-07
breast cancer	1_155176305	rs4971059	ENSG00000160766.14	GBAP1	-51117	5.8e-12	-0.40468	2e-10
breast cancer	1_155176305	rs4971059	ENSG00000160766.14	GBAP1	-51117	5.8e-12	-0.40468	5e-11
breast cancer	1_155212052	rs2974935	ENSG00000169231.13	THBS3	4071	2.46e-07	0.225842	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000160766.14	GBAP1	-15370	1.41e-29	-0.545437	2e-07
breast cancer	1_155212373	rs2075570	ENSG00000169231.13	THBS3	4392	3.08e-07	0.22381	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000160766.14	GBAP1	-15049	4.72e-30	-0.547871	5e-06
breast cancer	1_155216951	rs1057941	ENSG00000160766.14	GBAP1	-10471	2.07e-15	-0.434375	2e-07
breast cancer	1_155302483	rs7524950	ENSG00000225855.6	RUSC1-AS1	-19204	8.68e-06	0.207207	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000160766.14	GBAP1	75061	5.68e-14	-0.445521	3e-09
breast cancer	1_155446537	rs10796944	ENSG00000160766.14	GBAP1	219115	1.75e-10	-0.412743	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000225855.6	RUSC1-AS1	124850	7.38e-06	0.223032	7e-10
breast cancer	1_155587180	rs12091730	ENSG00000225855.6	RUSC1-AS1	265493	1.62e-05	0.215757	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000160766.14	GBAP1	359758	2.93e-10	-0.409669	2e-10
breast cancer	1_155697170	rs348196	ENSG00000160766.14	GBAP1	469748	9.11e-10	-0.401993	2e-08
breast cancer	1_156183252	rs11264454	ENSG00000196189.12	SEMA4A	35886	1.58e-12	0.233997	2e-08
breast cancer	1_156183252	rs11264454	ENSG00000196189.12	SEMA4A	35886	1.58e-12	0.233997	7e-07
breast cancer	1_16013277	rs1763604	ENSG00000186510.11	CLCNKA	-5598	6.46e-06	0.364506	7e-09
breast cancer	1_18480845	rs2992756	ENSG00000179023.8	KLHDC7A	-137	5.32e-18	0.576897	5e-17
breast cancer	1_18480845	rs2992756	ENSG00000179023.8	KLHDC7A	-137	5.32e-18	0.576897	2e-15
breast cancer	1_204546897	rs2290854	ENSG00000198625.12	MDM4	30518	4.49e-06	-0.197282	1e-07
breast cancer	1_204549714	rs4245739	ENSG00000198625.12	MDM4	33335	8.79e-06	-0.196229	4e-06
breast cancer	1_204549714	rs4245739	ENSG00000198625.12	MDM4	33335	8.79e-06	-0.196229	3e-23
breast cancer	1_204549714	rs4245739	ENSG00000198625.12	MDM4	33335	8.79e-06	-0.196229	6e-15
breast cancer	1_204549714	rs4245739	ENSG00000198625.12	MDM4	33335	8.79e-06	-0.196229	8e-18
breast cancer	1_204549714	rs4245739	ENSG00000198625.12	MDM4	33335	8.79e-06	-0.196229	2e-12
breast cancer	1_207903511	rs2724379	ENSG00000284237.1	LINC02767	-55781	2.21e-09	-0.419808	2e-07
breast cancer	1_91555907	rs12134245	ENSG00000097046.12	CDC7	55014	3.02e-09	-0.314595	4e-06
breast cancer	10_121904429	rs7899628	ENSG00000226864.2	ATE1-AS1	-23883	4.64e-08	-0.476458	9e-10
breast cancer	10_27080233	rs7918232	ENSG00000120539.14	MASTL	-75034	8.08e-10	0.599016	8e-06
breast cancer	10_5752689	rs55910451	ENSG00000057608.16	GDI2	-89443	2.21e-10	-0.309193	4e-07
breast cancer	11_111765903	rs643506	ENSG00000137713.15	PPP2R1B	-524	1.56e-07	-0.338863	2e-07
breast cancer	11_125389528	rs2059614	ENSG00000134955.11	SLC37A2	326461	4.01e-05	0.50635	1e-09
breast cancer	11_18642694	rs10832963	ENSG00000179119.14	SPTY2D1	7903	8.83e-06	-0.229857	9e-06
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	3.5e-07	0.338636	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	3.5e-07	0.338636	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	3.5e-07	0.338636	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	3.5e-07	0.338636	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	3.5e-07	0.338636	6e-12
breast cancer	11_66843174	rs7570	ENSG00000173621.8	LRFN4	-13473	1.05e-05	-0.291511	8e-06
breast cancer	11_69138652	rs72932523	ENSG00000162341.16	TPCN2	89755	3.47e-10	0.467276	1e-09
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	8.78e-35	0.544923	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	4.23e-14	0.340856	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177600.8	RPLP2	-6737	1.34e-05	0.193655	1e-12
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	8.78e-35	0.544923	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	4.23e-14	0.340856	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177600.8	RPLP2	-6737	1.34e-05	0.193655	3e-12
breast cancer	12_49251457	rs11168936	ENSG00000186897.4	C1QL4	-85731	7.26e-07	0.425166	9e-07
breast cancer	14_91374725	rs941764	ENSG00000015133.18	CCDC88C	-43119	2.76e-06	0.233389	2e-10
breast cancer	14_91374725	rs941764	ENSG00000015133.18	CCDC88C	-43119	2.76e-06	0.233389	4e-10
breast cancer	14_91374725	rs941764	ENSG00000015133.18	CCDC88C	-43119	2.76e-06	0.233389	6e-11
breast cancer	14_91374725	rs941764	ENSG00000015133.18	CCDC88C	-43119	2.76e-06	0.233389	2e-13
breast cancer	14_91374725	rs941764	ENSG00000015133.18	CCDC88C	-43119	2.76e-06	0.233389	2e-07
breast cancer	14_91374725	rs941764	ENSG00000015133.18	CCDC88C	-43119	2.76e-06	0.233389	8e-13
breast cancer	14_91374725	rs941764	ENSG00000015133.18	CCDC88C	-43119	2.76e-06	0.233389	6e-08
breast cancer	15_50402109	rs4774565	ENSG00000244879.6	GABPB1-AS1	46700	2.96e-10	-0.57992	2e-06
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	7.12e-08	-0.272836	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	7.12e-08	-0.272836	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	7.12e-08	-0.272836	4e-07
breast cancer	15_75516399	rs8027365	ENSG00000140400.16	MAN2C1	148245	7.72e-35	0.858155	1e-07
breast cancer	15_90965985	rs77554484	ENSG00000258725.1	PRC1-AS1	-6875	2.99e-05	-0.46609	1e-15
breast cancer	15_90965985	rs77554484	ENSG00000166965.12	RCCD1	10189	1.93e-10	0.378663	1e-15
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	2.51e-14	-0.472964	3e-10
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	2.51e-14	-0.472964	4e-08
breast cancer	16_56497273	rs2303282	ENSG00000125124.11	BBS2	-23010	2.08e-17	-0.515758	3e-07
breast cancer	16_71475893	rs8050871	ENSG00000167377.17	ZNF23	12798	8.46e-10	-0.391258	3e-06
breast cancer	17_2195889	rs16952006	ENSG00000167720.12	SRR	-107494	2.67e-08	-0.728324	3e-06
breast cancer	17_30884649	rs7223535	ENSG00000176390.11	CRLF3	59873	3.68e-05	0.24164	4e-10
breast cancer	17_30887862	rs113934718	ENSG00000176390.11	CRLF3	63086	4.57e-05	0.243798	1e-08
breast cancer	17_30894259	rs62070652	ENSG00000176390.11	CRLF3	69483	4.57e-05	0.243798	1e-06
breast cancer	17_30894259	rs62070652	ENSG00000176390.11	CRLF3	69483	4.57e-05	0.243798	6e-09
breast cancer	17_45394123	rs4763	ENSG00000264070.1	DND1P1	-191748	2.24e-27	1.1224	2e-08
breast cancer	17_45394123	rs4763	ENSG00000176681.14	LRRC37A	-898610	2.51e-08	0.677334	2e-08
breast cancer	17_45394123	rs4763	ENSG00000204650.14	LINC02210	-226205	1.23e-35	1.06688	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214401.4	KANSL1-AS1	-799453	4.89e-26	1.09596	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214425.7	LRRC37A4P	-156212	1.6e-31	-1.01254	2e-08
breast cancer	17_45394123	rs4763	ENSG00000262500.1	MAPK8IP1P1	-849483	4.98e-27	1.1572	2e-08
breast cancer	17_45394123	rs4763	ENSG00000186868.15	MAPT	-500259	6.79e-05	-0.276534	2e-08
breast cancer	17_45394123	rs4763	ENSG00000263503.1	MAPK8IP1P2	-208217	1.56e-26	1.18455	2e-08
breast cancer	17_45941122	rs62061734	ENSG00000204650.14	LINC02210	320794	8.12e-61	1.09101	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000262500.1	MAPK8IP1P1	-302484	1.1e-34	1.11519	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000232300.1	FAM215B	-621673	9.07e-08	0.608612	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214425.7	LRRC37A4P	390787	2.26e-44	-0.996162	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214401.4	KANSL1-AS1	-252454	6.23e-42	1.13811	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000186868.15	MAPT	46740	1.99e-05	-0.260167	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000185829.17	ARL17A	-638560	7.52e-09	0.607076	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000263503.1	MAPK8IP1P2	338782	8.48e-37	1.17234	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000264070.1	DND1P1	355251	2.56e-46	1.17694	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000238083.7	LRRC37A2	-570389	6.46e-33	0.994756	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000176681.14	LRRC37A	-351611	5.55e-11	0.69112	8e-12
breast cancer	17_46751565	rs199533	ENSG00000238083.7	LRRC37A2	240054	3.25e-33	1.01719	5e-08
breast cancer	17_46751565	rs199533	ENSG00000262500.1	MAPK8IP1P1	507959	3.17e-39	1.18313	5e-08
breast cancer	17_46751565	rs199533	ENSG00000186868.15	MAPT	857183	1.34e-05	-0.270339	5e-08
breast cancer	17_46751565	rs199533	ENSG00000176681.14	LRRC37A	458832	9.03e-11	0.69754	5e-08
breast cancer	17_46751565	rs199533	ENSG00000232300.1	FAM215B	188770	2.6e-07	0.599498	5e-08
breast cancer	17_46751565	rs199533	ENSG00000185829.17	ARL17A	171883	6.03e-12	0.723073	5e-08
breast cancer	17_46751565	rs199533	ENSG00000108379.9	WNT3	-81493	8.72e-05	0.313272	5e-08
breast cancer	17_46751565	rs199533	ENSG00000214401.4	KANSL1-AS1	557989	1.82e-42	1.16456	5e-08
breast cancer	17_46788237	rs199498	ENSG00000108379.9	WNT3	-44821	3.2e-06	0.347668	2e-08
breast cancer	17_46788237	rs199498	ENSG00000186868.15	MAPT	893855	2.71e-05	-0.246228	2e-08
breast cancer	17_46788237	rs199498	ENSG00000238083.7	LRRC37A2	276726	3.33e-23	0.838566	2e-08
breast cancer	17_46788237	rs199498	ENSG00000176681.14	LRRC37A	495504	1.19e-10	0.654021	2e-08
breast cancer	17_46788237	rs199498	ENSG00000214401.4	KANSL1-AS1	594661	1.15e-27	0.950166	2e-08
breast cancer	17_46788237	rs199498	ENSG00000262500.1	MAPK8IP1P1	544631	1.93e-27	0.986003	2e-08
breast cancer	17_46788237	rs199498	ENSG00000232300.1	FAM215B	225442	7.59e-07	0.544401	2e-08
breast cancer	17_46788237	rs199498	ENSG00000185829.17	ARL17A	208555	3.29e-09	0.596177	2e-08
breast cancer	17_81211408	rs9913021	ENSG00000141577.13	CEP131	-11591	8.89e-06	-0.194901	2e-06
breast cancer	17_82946434	rs898097	ENSG00000141560.14	FN3KRP	229751	8.37e-06	-0.315557	2e-06
breast cancer	18_26920652	rs232320	ENSG00000260372.6	AQP4-AS1	264910	5.78e-07	-0.321452	6e-09
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	9.18e-07	0.376836	9e-13
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	3.08e-06	0.226432	9e-13
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	9.18e-07	0.376836	2e-06
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	3.08e-06	0.226432	2e-06
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	9.18e-07	0.376836	4e-13
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	3.08e-06	0.226432	4e-13
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	9.18e-07	0.376836	7e-21
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	3.08e-06	0.226432	7e-21
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	9.18e-07	0.376836	2e-09
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	3.08e-06	0.226432	2e-09
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	9.18e-07	0.376836	1e-12
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	3.08e-06	0.226432	1e-12
breast cancer	19_19417997	rs1469713	ENSG00000250067.11	YJEFN3	-111367	1.45e-05	-0.145661	1e-10
breast cancer	19_19434887	rs2965183	ENSG00000250067.11	YJEFN3	-94477	1.45e-05	-0.145661	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000250067.11	YJEFN3	-94477	1.45e-05	-0.145661	6e-12
breast cancer	19_19535463	rs2304098	ENSG00000250067.11	YJEFN3	6099	6.15e-06	-0.152814	2e-11
breast cancer	19_43779080	rs1685191	ENSG00000176222.8	ZNF404	-104971	1.35e-07	-0.251731	4e-20
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	9.23e-08	-0.237558	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	9.23e-08	-0.237558	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	9.23e-08	-0.237558	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	9.23e-08	-0.237558	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	9.23e-08	-0.237558	2e-14
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	9.23e-08	-0.237558	1e-16
breast cancer	19_43919418	rs375066	ENSG00000176222.8	ZNF404	35367	2.51e-09	-0.267995	2e-14
breast cancer	2_171568284	rs11675683	ENSG00000071967.11	CYBRD1	46037	1.12e-06	0.16105	4e-08
breast cancer	2_201258707	rs3769821	ENSG00000155749.12	FLACC1	-98691	3.59e-08	-0.437832	4e-18
breast cancer	2_201279205	rs10931936	ENSG00000155749.12	FLACC1	-78193	6.12e-06	-0.380869	6e-06
breast cancer	2_201288355	rs1035142	ENSG00000155749.12	FLACC1	-69043	1.35e-09	-0.48547	3e-09
breast cancer	2_201288502	rs700635	ENSG00000155749.12	FLACC1	-68896	6.12e-06	-0.380869	5e-16
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	6.12e-06	-0.380869	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	6.12e-06	-0.380869	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	6.12e-06	-0.380869	6e-24
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	6.12e-06	-0.380869	7e-07
breast cancer	2_69900097	rs6716937	ENSG00000087338.4	GMCL1	70455	1.14e-07	-0.270081	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	3.24e-09	-0.961558	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	3.24e-09	-0.961558	6e-09
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	1.97e-07	-0.65245	3e-17
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	1.97e-07	-0.65245	9e-14
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	1.97e-07	-0.65245	4e-06
breast cancer	3_156645453	rs2136690	ENSG00000197980.12	LEKR1	-180028	6.86e-05	0.306548	4e-06
breast cancer	3_156645453	rs2136690	ENSG00000240875.5	LINC00886	-171609	1.45e-06	-0.305173	4e-06
breast cancer	3_156927968	rs7637701	ENSG00000240875.5	LINC00886	110906	6.13e-12	-0.413103	1e-06
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	2.1e-05	0.408464	7e-16
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	2.1e-05	0.408464	2e-08
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	2.1e-05	0.408464	6e-15
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	2.1e-05	0.408464	8e-07
breast cancer	3_47364189	rs146331761	ENSG00000172113.8	NME6	-937496	0.000130605	-0.575157	5e-07
breast cancer	5_128098106	rs1112956	ENSG00000245937.7	SLC12A2-DT	14934	9.72e-10	0.439944	9e-06
breast cancer	5_128227188	rs36715	ENSG00000245937.7	SLC12A2-DT	144016	2.27e-06	0.28727	4e-06
breast cancer	5_132304843	rs6860806	ENSG00000233006.6	MIR3936HG	-64805	2.43e-07	0.215698	3e-08
breast cancer	5_132304843	rs6860806	ENSG00000233006.6	MIR3936HG	-64805	2.43e-07	0.215698	8e-08
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	1.14e-05	-0.206482	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	1.14e-05	-0.206482	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	1.14e-05	-0.206482	1e-08
breast cancer	5_1453229	rs2617583	ENSG00000142319.17	SLC6A3	7799	6.45e-06	-0.399044	9e-07
breast cancer	5_56977866	rs10036895	ENSG00000155542.11	SETD9	68606	4.24e-11	0.57523	2e-12
breast cancer	5_81972251	rs111549985	ENSG00000205464.11	ATP6AP1L	-307211	1.28e-23	0.709823	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000186468.12	RPS23	-306326	2.78e-15	-0.455785	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000152348.15	ATG10	226	2.56e-26	1.04837	6e-12
breast cancer	5_82161539	rs2407064	ENSG00000186468.12	RPS23	-117038	1.21e-14	0.434797	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000152348.15	ATG10	189514	9.28e-21	-0.927279	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000205464.11	ATP6AP1L	-117923	7.29e-23	-0.681774	3e-08
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	3.43e-15	0.454514	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.18e-21	-0.969836	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	4.81e-23	-0.702805	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	3.43e-15	0.454514	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.18e-21	-0.969836	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	4.81e-23	-0.702805	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	3.43e-15	0.454514	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.18e-21	-0.969836	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	4.81e-23	-0.702805	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	3.43e-15	0.454514	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.18e-21	-0.969836	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	4.81e-23	-0.702805	1e-12
breast cancer	5_82340549	rs2407156	ENSG00000152348.15	ATG10	368524	9.09e-13	0.768333	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000186468.12	RPS23	61972	9.11e-12	-0.404276	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000205464.11	ATP6AP1L	61087	1.78e-16	0.612174	2e-06
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	2.54e-21	-0.849036	2e-12
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	2.54e-21	-0.849036	8e-10
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	2.54e-21	-0.849036	4e-08
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	2.54e-21	-0.849036	3e-12
breast cancer	6_25710343	rs68006638	ENSG00000186470.13	BTN3A2	-654816	6.42e-08	-0.763781	2e-07
breast cancer	6_25874195	rs13198474	ENSG00000186470.13	BTN3A2	-490964	2.45e-07	-0.750775	2e-07
breast cancer	6_26175638	rs17598658	ENSG00000186470.13	BTN3A2	-189521	1.94e-12	-0.935317	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000112812.15	PRSS16	-784355	3.19e-06	0.397502	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000186470.13	BTN3A2	98187	6.22e-16	-1.02181	2e-09
breast cancer	6_26993501	rs34546498	ENSG00000186470.13	BTN3A2	628342	2.18e-14	-1.00516	9e-10
breast cancer	6_26993501	rs34546498	ENSG00000112812.15	PRSS16	-254200	2.11e-06	0.417055	9e-10
breast cancer	6_27307055	rs56114371	ENSG00000186470.13	BTN3A2	941896	8.1e-14	-0.944549	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000182477.5	OR2B8P	-747110	2.42e-09	0.91171	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000220721.1	OR1F12P	-766261	5.07e-05	0.657853	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000112812.15	PRSS16	59354	2.02e-06	0.400191	2e-09
breast cancer	6_27457865	rs34196306	ENSG00000220721.1	OR1F12P	-615451	5.67e-05	0.696444	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000182477.5	OR2B8P	-596300	4.43e-07	0.833197	1e-09
breast cancer	6_27873148	rs45509595	ENSG00000112812.15	PRSS16	625447	4.32e-06	0.403841	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000182477.5	OR2B8P	-181017	2.59e-08	0.891259	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000220721.1	OR1F12P	-200168	4.01e-06	0.77433	5e-09
breast cancer	6_28106103	rs34662244	ENSG00000112812.15	PRSS16	858402	9.13e-07	0.42569	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000220721.1	OR1F12P	32787	2.91e-06	0.777406	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000182477.5	OR2B8P	51938	2.5e-08	0.883794	3e-09
breast cancer	6_28364364	rs13214023	ENSG00000220721.1	OR1F12P	291048	4.24e-07	0.879076	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000182477.5	OR2B8P	310199	5.25e-07	0.842823	1e-09
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	6.3e-05	0.35035	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	6.3e-05	0.35035	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	6.3e-05	0.35035	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	6.3e-05	0.35035	7e-08
breast cancer	6_29280372	rs3130834	ENSG00000204644.9	ZFP57	-400738	3.66e-08	1.05641	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000281831.1	HCP5B	-593411	6.79e-09	1.06547	5e-09
breast cancer	6_29388554	rs9257809	ENSG00000204644.9	ZFP57	-292556	5.75e-08	1.02024	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000281831.1	HCP5B	-485229	1.11e-08	1.02925	3e-08
breast cancer	6_29509637	rs1233480	ENSG00000281831.1	HCP5B	-364146	2.96e-07	0.875196	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000204644.9	ZFP57	-171473	1.22e-06	0.864063	5e-08
breast cancer	6_29693039	rs3116813	ENSG00000281831.1	HCP5B	-180744	1.04e-09	1.14411	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204644.9	ZFP57	11929	5.39e-09	1.14141	6e-07
breast cancer	6_29785031	rs147680653	ENSG00000281831.1	HCP5B	-88752	1.04e-09	1.14411	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000137312.14	FLOT1	-957702	4.03e-09	0.466734	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000204644.9	ZFP57	103921	5.39e-09	1.14141	1e-06
breast cancer	6_29882943	rs1611579	ENSG00000204644.9	ZFP57	201833	1.38e-08	1.066	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000281831.1	HCP5B	9160	4.94e-11	1.17073	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000137312.14	FLOT1	-859790	1.03e-09	0.462264	8e-07
breast cancer	6_30003183	rs3094146	ENSG00000204644.9	ZFP57	322073	3.62e-08	1.03668	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000137312.14	FLOT1	-739550	1.64e-09	0.456905	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000281831.1	HCP5B	129400	2.7e-10	1.1293	7e-07
breast cancer	6_30107326	rs2523992	ENSG00000204644.9	ZFP57	426216	6.58e-05	0.591082	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000137312.14	FLOT1	-635407	4.24e-06	0.274524	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000281831.1	HCP5B	233543	8.65e-06	0.630746	2e-07
breast cancer	6_30365728	rs3094054	ENSG00000281831.1	HCP5B	491945	3.36e-09	1.10283	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000146112.11	PPP1R18	-322167	3.79e-05	-0.260018	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204644.9	ZFP57	684618	1.65e-06	0.943968	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000137312.14	FLOT1	-377005	7.24e-10	0.482651	1e-07
breast cancer	6_30374976	rs115707823	ENSG00000137312.14	FLOT1	-367757	8.04e-10	0.431078	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000281831.1	HCP5B	501193	4.33e-08	0.920679	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204644.9	ZFP57	693866	8.91e-06	0.786779	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000137312.14	FLOT1	-367757	8.04e-10	0.431078	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000281831.1	HCP5B	501193	4.33e-08	0.920679	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204644.9	ZFP57	693866	8.91e-06	0.786779	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000281831.1	HCP5B	599743	1.73e-07	0.91314	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000146112.11	PPP1R18	-214369	1.66e-06	-0.278066	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000137312.14	FLOT1	-269207	5.41e-11	0.473222	2e-06
breast cancer	6_30576624	rs3132610	ENSG00000281831.1	HCP5B	702841	4.67e-07	0.921614	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000146112.11	PPP1R18	-111271	2.42e-06	-0.285994	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000137312.14	FLOT1	-166109	6.97e-12	0.513866	1e-06
breast cancer	6_30682249	rs9262142	ENSG00000137312.14	FLOT1	-60484	3.58e-12	0.512353	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000146112.11	PPP1R18	-5646	1.56e-06	-0.286702	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000281831.1	HCP5B	808466	8.07e-07	0.890205	3e-06
breast cancer	6_30793795	rs3129984	ENSG00000146112.11	PPP1R18	105900	1.56e-06	-0.286702	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000281831.1	HCP5B	920012	8.07e-07	0.890205	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000137312.14	FLOT1	51062	3.58e-12	0.512353	8e-06
breast cancer	6_31347004	rs115392158	ENSG00000204540.10	PSORS1C1	232254	5.65e-06	-0.498616	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000256166.1	LINC02571	45362	2.01e-05	0.393793	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000146112.11	PPP1R18	659109	3.29e-05	-0.160669	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204540.10	PSORS1C1	232254	5.65e-06	-0.498616	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000256166.1	LINC02571	45362	2.01e-05	0.393793	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000146112.11	PPP1R18	659109	3.29e-05	-0.160669	9e-06
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	2.04e-06	-0.509903	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000223534.1	HLA-DQB1-AS1	39341	5.27e-05	-0.37097	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	2.04e-06	-0.509903	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000223534.1	HLA-DQB1-AS1	39341	5.27e-05	-0.37097	5e-07
breast cancer	6_33272092	rs17215231	ENSG00000231500.6	RPS18	44	1.44e-25	-0.931796	9e-13
breast cancer	6_43259403	rs111342015	ENSG00000112667.12	DNPH1	29919	1.4e-05	-0.421897	9e-08
breast cancer	7_100437651	rs117911427	ENSG00000121716.20	PILRB	85475	5.87e-06	0.87757	7e-06
breast cancer	7_102478605	rs369574511	ENSG00000233297.4	RASA4DP	-211864	8.79e-06	0.436301	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000105808.17	RASA4	-138152	2.04e-06	0.385013	2e-07
breast cancer	7_74696373	rs74910854	ENSG00000263001.5	GTF2I	38706	5.58e-06	0.393857	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000196275.13	GTF2IRD2	-155178	3.47e-06	0.68875	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000123965.13	PMS2P5	-197743	2.11e-06	0.83877	5e-06
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	3.82e-05	0.374152	3e-07
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	3.82e-05	0.374152	6e-09
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	3.82e-05	0.374152	1e-08
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	3.82e-05	0.374152	3e-08
breast cancer	8_80887958	rs6473252	ENSG00000164684.13	ZNF704	13177	5.61e-05	0.211589	8e-07
breast cancer	9_104094512	rs4742903	ENSG00000136824.18	SMC2	252	1.06e-07	-0.22595	2e-07
breast cancer	9_104094512	rs4742903	ENSG00000136824.18	SMC2	252	1.06e-07	-0.22595	3e-08
breast cancer	9_133463535	rs3124765	ENSG00000148290.9	SURF1	106859	8.23e-07	0.29233	2e-06