DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
breast cancer	1_100414772	rs612683	ENSG00000079335.18	CDC14A	63038	2.61e-08	-0.311236	3e-07
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	8e-05	0.404995	1e-06
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	8e-05	0.404995	3e-08
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	8e-05	0.404995	1e-06
breast cancer	1_113903258	rs7513707	ENSG00000226167.1	AP4B1-AS1	46623	3.91e-05	-0.279927	2e-11
breast cancer	1_113905767	rs11552449	ENSG00000226167.1	AP4B1-AS1	49132	8.58e-05	-0.273447	1e-09
breast cancer	1_113905767	rs11552449	ENSG00000226167.1	AP4B1-AS1	49132	8.58e-05	-0.273447	6e-07
breast cancer	1_113905767	rs11552449	ENSG00000226167.1	AP4B1-AS1	49132	8.58e-05	-0.273447	3e-09
breast cancer	1_113905767	rs11552449	ENSG00000226167.1	AP4B1-AS1	49132	8.58e-05	-0.273447	2e-08
breast cancer	1_113905767	rs11552449	ENSG00000226167.1	AP4B1-AS1	49132	8.58e-05	-0.273447	5e-11
breast cancer	1_121121848	rs369304377	ENSG00000171943.11	SRGAP2C	-62962	9.98e-08	-0.313141	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000270231.3	NBPF8	685495	3.33e-09	0.482893	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000273136.6	NBPF26	397925	4.26e-07	0.480275	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000270392.2	PFN1P2	687796	5.8e-07	0.360976	2e-29
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.15e-07	0.480086	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	2.81e-10	-0.367692	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.15e-07	0.480086	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	2.81e-10	-0.367692	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.15e-07	0.480086	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	2.81e-10	-0.367692	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.15e-07	0.480086	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	2.81e-10	-0.367692	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.15e-07	0.480086	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	2.81e-10	-0.367692	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.15e-07	0.480086	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	2.81e-10	-0.367692	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.15e-07	0.480086	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	2.81e-10	-0.367692	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.15e-07	0.480086	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	2.81e-10	-0.367692	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	5.15e-07	0.480086	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	2.81e-10	-0.367692	4e-20
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.9e-16	0.58683	5e-09
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.9e-16	0.58683	8e-09
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.9e-16	0.58683	2e-07
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.9e-16	0.58683	6e-10
breast cancer	1_155176305	rs4971059	ENSG00000169231.13	THBS3	-31676	1.81e-06	0.287147	2e-10
breast cancer	1_155176305	rs4971059	ENSG00000160766.14	GBAP1	-51117	4.44e-13	-0.498152	2e-10
breast cancer	1_155176305	rs4971059	ENSG00000169231.13	THBS3	-31676	1.81e-06	0.287147	5e-11
breast cancer	1_155176305	rs4971059	ENSG00000160766.14	GBAP1	-51117	4.44e-13	-0.498152	5e-11
breast cancer	1_155212052	rs2974935	ENSG00000169231.13	THBS3	4071	2.3e-14	0.360309	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000225855.6	RUSC1-AS1	-109635	6.44e-07	0.254499	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000160752.14	FDPS	-96696	8.24e-05	0.15239	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000160766.14	GBAP1	-15370	2.44e-26	-0.556817	2e-07
breast cancer	1_155212373	rs2075570	ENSG00000225855.6	RUSC1-AS1	-109314	1.14e-06	0.250017	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000169231.13	THBS3	4392	1.81e-14	0.362806	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000160766.14	GBAP1	-15049	4.88e-26	-0.556253	5e-06
breast cancer	1_155216951	rs1057941	ENSG00000185499.16	MUC1	24035	4.7e-05	0.245818	2e-07
breast cancer	1_155216951	rs1057941	ENSG00000169231.13	THBS3	8970	1.51e-07	0.271784	2e-07
breast cancer	1_155216951	rs1057941	ENSG00000160766.14	GBAP1	-10471	1.45e-15	-0.468566	2e-07
breast cancer	1_155302483	rs7524950	ENSG00000169231.13	THBS3	94502	1.47e-07	0.30325	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000160766.14	GBAP1	75061	4.72e-11	-0.442047	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000160767.20	FAM189B	47000	3.47e-05	-0.18349	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000160752.14	FDPS	-6265	3.81e-06	0.208545	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000225855.6	RUSC1-AS1	-19204	1.9e-12	0.409613	3e-09
breast cancer	1_155446537	rs10796944	ENSG00000225855.6	RUSC1-AS1	124850	5.27e-10	0.397424	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000160766.14	GBAP1	219115	0.00010799	-0.292747	7e-10
breast cancer	1_155587180	rs12091730	ENSG00000225855.6	RUSC1-AS1	265493	3.13e-09	0.375301	2e-10
breast cancer	1_155697170	rs348196	ENSG00000225855.6	RUSC1-AS1	375483	1.97e-10	0.370851	2e-08
breast cancer	1_155697170	rs348196	ENSG00000203761.5	MSTO2P	-48659	1.56e-07	-0.295995	2e-08
breast cancer	1_156183252	rs11264454	ENSG00000196189.12	SEMA4A	35886	2.82e-13	0.222524	2e-08
breast cancer	1_156183252	rs11264454	ENSG00000196189.12	SEMA4A	35886	2.82e-13	0.222524	7e-07
breast cancer	1_16013277	rs1763604	ENSG00000186510.11	CLCNKA	-5598	7.01e-09	-0.470523	7e-09
breast cancer	1_204549714	rs4245739	ENSG00000198625.12	MDM4	33335	5.22e-06	-0.258964	3e-23
breast cancer	1_204549714	rs4245739	ENSG00000198625.12	MDM4	33335	5.22e-06	-0.258964	8e-18
breast cancer	1_204549714	rs4245739	ENSG00000198625.12	MDM4	33335	5.22e-06	-0.258964	2e-12
breast cancer	1_204549714	rs4245739	ENSG00000198625.12	MDM4	33335	5.22e-06	-0.258964	4e-06
breast cancer	1_204549714	rs4245739	ENSG00000198625.12	MDM4	33335	5.22e-06	-0.258964	6e-15
breast cancer	1_207903511	rs2724379	ENSG00000284237.1	LINC02767	-55781	2.4e-10	-0.528792	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000171357.5	LURAP1	-284865	6.37e-05	0.309709	2e-07
breast cancer	1_46135245	rs1707302	ENSG00000269956.1	MKNK1-AS1	-403451	0.000119419	-0.229559	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000117480.15	FAAH	-259020	9.16e-05	0.315648	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000171357.5	LURAP1	-68089	3.51e-05	-0.304845	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000269956.1	MKNK1-AS1	-403451	0.000119419	-0.229559	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000117480.15	FAAH	-259020	9.16e-05	0.315648	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000171357.5	LURAP1	-68089	3.51e-05	-0.304845	3e-10
breast cancer	1_91555907	rs12134245	ENSG00000097046.12	CDC7	55014	1.07e-05	-0.229267	4e-06
breast cancer	10_121904429	rs7899628	ENSG00000226864.2	ATE1-AS1	-23883	1.95e-05	-0.346993	9e-10
breast cancer	10_27080233	rs7918232	ENSG00000120539.14	MASTL	-75034	8.82e-12	0.632628	8e-06
breast cancer	10_92172529	rs72807246	ENSG00000228701.1	TNKS2-DT	374238	1.37e-06	0.652817	3e-06
breast cancer	11_111765903	rs643506	ENSG00000204381.11	LAYN	225623	9.35e-07	-0.309132	2e-07
breast cancer	11_111765903	rs643506	ENSG00000183644.13	HOATZ	250392	3.09e-06	-0.463478	2e-07
breast cancer	11_1871355	rs4980389	ENSG00000130595.17	TNNT3	-48207	8.81e-09	-0.446268	4e-07
breast cancer	11_1874478	rs4980386	ENSG00000130595.17	TNNT3	-45084	7.23e-09	-0.444821	9e-17
breast cancer	11_1877434	rs1973765	ENSG00000130595.17	TNNT3	-42128	1.54e-08	-0.425282	1e-37
breast cancer	11_1880867	rs4980383	ENSG00000130595.17	TNNT3	-38695	3.8e-06	0.380205	3e-06
breast cancer	11_1880867	rs4980383	ENSG00000130595.17	TNNT3	-38695	3.8e-06	0.380205	9e-09
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.62e-05	-0.436551	6e-21
breast cancer	11_1887776	rs3817198	ENSG00000130595.17	TNNT3	-31786	3.72e-05	0.368678	6e-21
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.62e-05	-0.436551	3e-09
breast cancer	11_1887776	rs3817198	ENSG00000130595.17	TNNT3	-31786	3.72e-05	0.368678	3e-09
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.62e-05	-0.436551	2e-13
breast cancer	11_1887776	rs3817198	ENSG00000130595.17	TNNT3	-31786	3.72e-05	0.368678	2e-13
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.62e-05	-0.436551	1e-18
breast cancer	11_1887776	rs3817198	ENSG00000130595.17	TNNT3	-31786	3.72e-05	0.368678	1e-18
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.62e-05	-0.436551	1e-10
breast cancer	11_1887776	rs3817198	ENSG00000130595.17	TNNT3	-31786	3.72e-05	0.368678	1e-10
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.62e-05	-0.436551	2e-11
breast cancer	11_1887776	rs3817198	ENSG00000130595.17	TNNT3	-31786	3.72e-05	0.368678	2e-11
breast cancer	11_1892909	rs576603	ENSG00000130595.17	TNNT3	-26653	1.08e-10	-0.479817	2e-08
breast cancer	11_1920716	rs909116	ENSG00000130595.17	TNNT3	1154	3.21e-08	-0.426691	7e-07
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	8.65e-08	-0.453106	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1.83e-08	0.396865	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172638.12	EFEMP2	-57997	4.09e-05	-0.121124	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	8.65e-08	-0.453106	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1.83e-08	0.396865	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172638.12	EFEMP2	-57997	4.09e-05	-0.121124	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	8.65e-08	-0.453106	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1.83e-08	0.396865	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172638.12	EFEMP2	-57997	4.09e-05	-0.121124	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	8.65e-08	-0.453106	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1.83e-08	0.396865	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172638.12	EFEMP2	-57997	4.09e-05	-0.121124	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	8.65e-08	-0.453106	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1.83e-08	0.396865	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172638.12	EFEMP2	-57997	4.09e-05	-0.121124	6e-12
breast cancer	11_65935052	rs617791	ENSG00000175334.7	BANF1	-67125	7.75e-05	0.127136	7e-06
breast cancer	11_66843174	rs7570	ENSG00000173621.8	LRFN4	-13473	1.11e-07	-0.354117	8e-06
breast cancer	11_66843174	rs7570	ENSG00000173992.8	CCS	250090	2.87e-05	-0.186708	8e-06
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	2.34e-24	0.451281	3e-12
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	5.72e-37	0.687383	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	2.34e-24	0.451281	1e-12
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	5.72e-37	0.687383	1e-12
breast cancer	12_111162330	rs11065822	ENSG00000257595.2	LINC02356	-206952	0.000120884	-0.233803	6e-09
breast cancer	12_49251457	rs11168936	ENSG00000139636.15	LMBR1L	140559	4.15e-05	-0.141802	9e-07
breast cancer	15_48608389	rs1876206	ENSG00000166147.13	FBN1	-37460	1.24e-05	0.239339	6e-06
breast cancer	15_50402109	rs4774565	ENSG00000244879.6	GABPB1-AS1	46700	3.06e-10	-0.557882	2e-06
breast cancer	15_74300521	rs12904134	ENSG00000103653.16	CSK	-481536	5.05e-05	-0.127981	8e-06
breast cancer	15_74843920	rs6938	ENSG00000140474.12	ULK3	723	1.23e-06	-0.263126	9e-08
breast cancer	15_74843920	rs6938	ENSG00000178802.17	MPI	-46085	3.21e-07	0.309758	9e-08
breast cancer	15_74843920	rs6938	ENSG00000103653.16	CSK	61863	5.37e-05	-0.123275	9e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	3.59e-09	0.32514	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	6.37e-10	-0.302414	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	3.59e-09	0.32514	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	6.37e-10	-0.302414	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	3.59e-09	0.32514	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	6.37e-10	-0.302414	6e-08
breast cancer	15_75516399	rs8027365	ENSG00000140400.16	MAN2C1	148245	3.22e-39	0.908961	1e-07
breast cancer	15_75516399	rs8027365	ENSG00000169371.13	SNUPN	-110070	2.07e-06	0.274589	1e-07
breast cancer	15_77977130	rs12906542	ENSG00000167202.11	TBC1D2B	-100594	4.82e-08	-0.305454	7e-07
breast cancer	15_90965985	rs77554484	ENSG00000258725.1	PRC1-AS1	-6875	3.83e-07	-0.641862	1e-15
breast cancer	15_90965985	rs77554484	ENSG00000166965.12	RCCD1	10189	5.36e-09	0.358	1e-15
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	1.44e-05	-0.432821	2e-19
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	1.44e-05	-0.432821	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	1.44e-05	-0.432821	4e-08
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	2.03e-12	-0.524809	3e-10
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	2.03e-12	-0.524809	4e-08
breast cancer	16_56497273	rs2303282	ENSG00000125124.11	BBS2	-23010	6.71e-17	-0.602435	3e-07
breast cancer	16_71475893	rs8050871	ENSG00000167377.17	ZNF23	12798	1.8e-10	-0.344134	3e-06
breast cancer	16_71475893	rs8050871	ENSG00000040199.18	PHLPP2	-248808	0.000178882	-0.220464	3e-06
breast cancer	17_2195889	rs16952006	ENSG00000167720.12	SRR	-107494	6.25e-07	-0.743545	3e-06
breast cancer	17_41094871	rs150537328	ENSG00000108759.3	KRT32	-372558	7.64e-07	0.687327	2e-06
breast cancer	17_45394123	rs4763	ENSG00000204650.14	LINC02210	-226205	7.49e-27	1.10782	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214425.7	LRRC37A4P	-156212	2.54e-24	-1.02885	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214401.4	KANSL1-AS1	-799453	1.29e-15	0.957594	2e-08
breast cancer	17_45394123	rs4763	ENSG00000262500.1	MAPK8IP1P1	-849483	3.42e-22	1.046	2e-08
breast cancer	17_45394123	rs4763	ENSG00000263503.1	MAPK8IP1P2	-208217	2.4e-20	1.08075	2e-08
breast cancer	17_45394123	rs4763	ENSG00000264070.1	DND1P1	-191748	1.83e-17	1.0962	2e-08
breast cancer	17_45941122	rs62061734	ENSG00000176681.14	LRRC37A	-351611	1.77e-05	0.475071	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000185829.17	ARL17A	-638560	1.16e-06	0.596797	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000262500.1	MAPK8IP1P1	-302484	6.73e-44	1.15672	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000264070.1	DND1P1	355251	5.57e-33	1.22542	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000263503.1	MAPK8IP1P2	338782	1.04e-36	1.17196	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000204650.14	LINC02210	320794	2.92e-57	1.21953	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214401.4	KANSL1-AS1	-252454	4.33e-33	1.12795	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000186868.15	MAPT	46740	1.38e-05	0.44906	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000238083.7	LRRC37A2	-570389	5.65e-26	1.01518	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214425.7	LRRC37A4P	390787	3.27e-49	-1.1324	8e-12
breast cancer	17_46751565	rs199533	ENSG00000186868.15	MAPT	857183	6.25e-07	0.522428	5e-08
breast cancer	17_46751565	rs199533	ENSG00000238083.7	LRRC37A2	240054	3.88e-24	1.00871	5e-08
breast cancer	17_46751565	rs199533	ENSG00000262500.1	MAPK8IP1P1	507959	1.51e-40	1.15496	5e-08
breast cancer	17_46751565	rs199533	ENSG00000108379.9	WNT3	-81493	0.000112581	0.411023	5e-08
breast cancer	17_46751565	rs199533	ENSG00000214401.4	KANSL1-AS1	557989	6.58e-34	1.16365	5e-08
breast cancer	17_46751565	rs199533	ENSG00000185829.17	ARL17A	171883	2.52e-08	0.692779	5e-08
breast cancer	17_46751565	rs199533	ENSG00000176681.14	LRRC37A	458832	0.000172855	0.427691	5e-08
breast cancer	17_46788237	rs199498	ENSG00000108379.9	WNT3	-44821	7.61e-06	0.446459	2e-08
breast cancer	17_46788237	rs199498	ENSG00000214401.4	KANSL1-AS1	594661	9.15e-23	0.94404	2e-08
breast cancer	17_46788237	rs199498	ENSG00000186868.15	MAPT	893855	6.48e-06	0.448749	2e-08
breast cancer	17_46788237	rs199498	ENSG00000238083.7	LRRC37A2	276726	6.05e-19	0.85968	2e-08
breast cancer	17_46788237	rs199498	ENSG00000262500.1	MAPK8IP1P1	544631	1.56e-25	0.925144	2e-08
breast cancer	17_46788237	rs199498	ENSG00000185829.17	ARL17A	208555	2.53e-07	0.608403	2e-08
breast cancer	17_81211408	rs9913021	ENSG00000224877.3	NDUFAF8	-27831	2.8e-11	0.306776	2e-06
breast cancer	17_82597601	rs62079673	ENSG00000141580.15	WDR45B	-50952	5.65e-09	0.326537	1e-06
breast cancer	17_82946434	rs898097	ENSG00000141560.14	FN3KRP	229751	2.42e-06	-0.310516	2e-06
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.85e-06	-0.253256	2e-09
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.85e-06	-0.253256	2e-06
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.85e-06	-0.253256	1e-12
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.85e-06	-0.253256	7e-21
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.85e-06	-0.253256	4e-13
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.85e-06	-0.253256	9e-13
breast cancer	19_17282085	rs8100241	ENSG00000130312.6	MRPL34	-10747	4.22e-05	0.182453	4e-08
breast cancer	19_18422832	rs7258465	ENSG00000175489.9	LRRC25	25215	5.48e-06	-0.138186	3e-28
breast cancer	19_18422832	rs7258465	ENSG00000105656.12	ELL	-99295	1.47e-10	0.272253	3e-28
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	5.18e-11	0.278579	5e-28
breast cancer	19_18460331	rs4808801	ENSG00000175489.9	LRRC25	62714	4.28e-06	-0.139864	5e-28
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	5.18e-11	0.278579	6e-14
breast cancer	19_18460331	rs4808801	ENSG00000175489.9	LRRC25	62714	4.28e-06	-0.139864	6e-14
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	5.18e-11	0.278579	6e-06
breast cancer	19_18460331	rs4808801	ENSG00000175489.9	LRRC25	62714	4.28e-06	-0.139864	6e-06
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	5.18e-11	0.278579	2e-31
breast cancer	19_18460331	rs4808801	ENSG00000175489.9	LRRC25	62714	4.28e-06	-0.139864	2e-31
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	5.18e-11	0.278579	5e-15
breast cancer	19_18460331	rs4808801	ENSG00000175489.9	LRRC25	62714	4.28e-06	-0.139864	5e-15
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	5.18e-11	0.278579	4e-15
breast cancer	19_18460331	rs4808801	ENSG00000175489.9	LRRC25	62714	4.28e-06	-0.139864	4e-15
breast cancer	19_18522945	rs172032	ENSG00000105656.12	ELL	818	4.86e-07	0.203133	1e-16
breast cancer	19_19417997	rs1469713	ENSG00000213996.12	TM6SF2	144606	1.58e-05	0.380593	1e-10
breast cancer	19_19434887	rs2965183	ENSG00000213996.12	TM6SF2	161496	1.58e-05	0.380593	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000213996.12	TM6SF2	161496	1.58e-05	0.380593	1e-11
breast cancer	19_19535463	rs2304098	ENSG00000213996.12	TM6SF2	262072	4.5e-05	0.357422	2e-11
breast cancer	19_2226677	rs3815308	ENSG00000104899.7	AMH	-22632	8.95e-06	0.356144	7e-06
breast cancer	19_43919418	rs375066	ENSG00000176222.8	ZNF404	35367	2.83e-08	-0.25796	2e-14
breast cancer	19_51942133	rs8113308	ENSG00000269235.1	ZNF350-AS1	-7001	1e-08	0.609705	6e-07
breast cancer	2_201258707	rs3769821	ENSG00000155749.12	FLACC1	-98691	3.32e-05	-0.331405	4e-18
breast cancer	2_201258707	rs3769821	ENSG00000064012.21	CASP8	25264	1.12e-16	0.462783	4e-18
breast cancer	2_201279205	rs10931936	ENSG00000064012.21	CASP8	45762	2.26e-16	0.476256	6e-06
breast cancer	2_201279205	rs10931936	ENSG00000155749.12	FLACC1	-78193	6.98e-07	-0.407203	6e-06
breast cancer	2_201288355	rs1035142	ENSG00000064012.21	CASP8	54912	2.64e-37	0.63502	3e-09
breast cancer	2_201288355	rs1035142	ENSG00000155749.12	FLACC1	-69043	1.08e-05	-0.349844	3e-09
breast cancer	2_201288502	rs700635	ENSG00000155749.12	FLACC1	-68896	8.53e-07	-0.405411	5e-16
breast cancer	2_201288502	rs700635	ENSG00000064012.21	CASP8	55059	4.66e-17	0.486687	5e-16
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	3.55e-16	0.474769	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	5.2e-07	-0.412553	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	3.55e-16	0.474769	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	5.2e-07	-0.412553	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	3.55e-16	0.474769	6e-24
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	5.2e-07	-0.412553	6e-24
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	3.55e-16	0.474769	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	5.2e-07	-0.412553	2e-16
breast cancer	2_201384985	rs2714486	ENSG00000064012.21	CASP8	151542	7.97e-09	-0.422799	7e-10
breast cancer	2_201502866	rs77688320	ENSG00000064012.21	CASP8	269423	9.66e-08	-0.446234	3e-09
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	4.51e-06	0.335904	3e-06
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	4.51e-06	0.335904	5e-09
breast cancer	2_28897867	rs4577244	ENSG00000171103.10	TRMT61B	27566	5.92e-06	0.334243	2e-09
breast cancer	2_41931164	rs17029056	ENSG00000205086.6	LINC02898	-23102	5.64e-06	-0.439481	4e-06
breast cancer	20_39051206	rs742276	ENSG00000101452.14	DHX35	88907	5.97e-05	-0.27535	9e-06
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	1.36e-09	-1.0428	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000215424.9	MCM3AP-AS1	131091	2.6e-05	0.597026	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	1.36e-09	-1.0428	6e-09
breast cancer	21_46360308	rs9808759	ENSG00000215424.9	MCM3AP-AS1	131091	2.6e-05	0.597026	6e-09
breast cancer	22_29273659	rs4820803	ENSG00000100263.13	RHBDD3	5681	3.65e-05	0.211748	2e-06
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	7.73e-22	-1.00589	3e-17
breast cancer	22_38962032	rs12628403	ENSG00000128383.12	APOBEC3A	9291	4.08e-06	-0.268965	3e-17
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	7.73e-22	-1.00589	9e-14
breast cancer	22_38962032	rs12628403	ENSG00000128383.12	APOBEC3A	9291	4.08e-06	-0.268965	9e-14
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	7.73e-22	-1.00589	4e-06
breast cancer	22_38962032	rs12628403	ENSG00000128383.12	APOBEC3A	9291	4.08e-06	-0.268965	4e-06
breast cancer	22_40868537	rs62237039	ENSG00000100410.7	PHF5A	-600188	0.000146761	0.467464	5e-09
breast cancer	3_14520620	rs1106333	ENSG00000144596.12	GRIP2	-35455	2.45e-07	0.525711	6e-08
breast cancer	3_156645453	rs2136690	ENSG00000240875.5	LINC00886	-171609	7.36e-05	-0.325489	4e-06
breast cancer	3_156927968	rs7637701	ENSG00000197980.12	LEKR1	102487	3.48e-06	0.392762	1e-06
breast cancer	3_156927968	rs7637701	ENSG00000240875.5	LINC00886	110906	1.4e-07	-0.388818	1e-06
breast cancer	3_156927968	rs7637701	ENSG00000174912.7	METTL15P1	213040	1.22e-05	-0.363121	1e-06
breast cancer	3_46846708	rs56387622	ENSG00000188086.13	PRSS45P	101953	1.96e-05	0.530968	5e-19
breast cancer	4_88058377	rs2725207	ENSG00000118762.7	PKD2	50709	3.73e-10	0.316969	6e-07
breast cancer	5_128098106	rs1112956	ENSG00000245937.7	SLC12A2-DT	14934	1.18e-09	0.435542	9e-06
breast cancer	5_128098106	rs1112956	ENSG00000138829.11	FBN2	-561079	6.51e-05	0.31818	9e-06
breast cancer	5_128227188	rs36715	ENSG00000245937.7	SLC12A2-DT	144016	2.02e-07	0.315065	4e-06
breast cancer	5_132304843	rs6860806	ENSG00000233006.6	MIR3936HG	-64805	3.22e-06	0.3241	8e-08
breast cancer	5_132304843	rs6860806	ENSG00000197375.12	SLC22A5	-64909	6.21e-12	-0.509736	8e-08
breast cancer	5_132304843	rs6860806	ENSG00000233006.6	MIR3936HG	-64805	3.22e-06	0.3241	3e-08
breast cancer	5_132304843	rs6860806	ENSG00000197375.12	SLC22A5	-64909	6.21e-12	-0.509736	3e-08
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	2.32e-05	-0.326298	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000239642.5	MEIKIN	520557	5.71e-05	0.373024	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000197375.12	SLC22A5	96503	8.59e-13	0.581589	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	2.32e-05	-0.326298	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000239642.5	MEIKIN	520557	5.71e-05	0.373024	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000197375.12	SLC22A5	96503	8.59e-13	0.581589	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	2.32e-05	-0.326298	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000239642.5	MEIKIN	520557	5.71e-05	0.373024	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000197375.12	SLC22A5	96503	8.59e-13	0.581589	3e-07
breast cancer	5_132497907	rs736801	ENSG00000072682.18	P4HA2	202592	8.46e-05	0.188542	8e-08
breast cancer	5_132497907	rs736801	ENSG00000197375.12	SLC22A5	128155	6.63e-10	-0.508241	8e-08
breast cancer	5_132497907	rs736801	ENSG00000239642.5	MEIKIN	552209	2.42e-05	-0.388688	8e-08
breast cancer	5_1453229	rs2617583	ENSG00000142319.17	SLC6A3	7799	2.92e-06	-0.381319	9e-07
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	3.48e-06	0.440285	1e-08
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	3.48e-06	0.440285	3e-27
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	3.48e-06	0.440285	7e-20
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	3.48e-06	0.440285	1e-39
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	3.48e-06	0.440285	3e-36
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	3.48e-06	0.440285	5e-09
breast cancer	5_56737113	rs1862626	ENSG00000155542.11	SETD9	-172147	3.48e-06	0.440285	4e-12
breast cancer	5_56977866	rs10036895	ENSG00000155542.11	SETD9	68606	5.65e-10	0.550427	2e-12
breast cancer	5_81972251	rs111549985	ENSG00000186468.12	RPS23	-306326	3.5e-10	-0.277244	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000205464.11	ATP6AP1L	-307211	1e-26	0.922474	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000152348.15	ATG10	226	4e-24	0.890697	6e-12
breast cancer	5_82161539	rs2407064	ENSG00000205464.11	ATP6AP1L	-117923	9.9e-27	-0.883033	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000186468.12	RPS23	-117038	1.32e-10	0.271032	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000152348.15	ATG10	189514	4.08e-22	-0.822784	3e-08
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.13e-10	0.274882	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	3.16e-22	-0.833386	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.28e-27	-0.903816	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.13e-10	0.274882	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	3.16e-22	-0.833386	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.28e-27	-0.903816	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.13e-10	0.274882	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	3.16e-22	-0.833386	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.28e-27	-0.903816	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.13e-10	0.274882	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	3.16e-22	-0.833386	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.28e-27	-0.903816	1e-12
breast cancer	5_82340549	rs2407156	ENSG00000186468.12	RPS23	61972	1.77e-07	-0.228542	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000205464.11	ATP6AP1L	61087	8.94e-25	0.873234	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000152348.15	ATG10	368524	2.07e-15	0.714747	2e-06
breast cancer	6_122394099	rs74392007	ENSG00000025156.12	HSF2	-5447	1.99e-09	-0.585108	3e-07
breast cancer	6_122554525	rs76092474	ENSG00000025156.12	HSF2	154979	1.93e-09	-0.585851	3e-06
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.68e-41	-1.11717	8e-10
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.68e-41	-1.11717	3e-12
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.68e-41	-1.11717	2e-12
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.68e-41	-1.11717	4e-08
breast cancer	6_25710343	rs68006638	ENSG00000186470.13	BTN3A2	-654816	4.96e-16	-1.22735	2e-07
breast cancer	6_25710343	rs68006638	ENSG00000124549.14	BTN2A3P	-711048	0.000105335	0.387446	2e-07
breast cancer	6_25874195	rs13198474	ENSG00000186470.13	BTN3A2	-490964	3.7e-15	-1.21556	2e-07
breast cancer	6_25874195	rs13198474	ENSG00000124549.14	BTN2A3P	-547196	0.000148865	0.385538	2e-07
breast cancer	6_26175638	rs17598658	ENSG00000124549.14	BTN2A3P	-245753	8.56e-05	0.38546	2e-09
breast cancer	6_26175638	rs17598658	ENSG00000186470.13	BTN3A2	-189521	5.99e-17	-1.23713	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000112812.15	PRSS16	-784355	4.38e-07	0.711233	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000186470.13	BTN3A2	98187	6.43e-31	-1.42083	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000124613.8	ZNF391	-911269	0.000125915	0.572274	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000204789.4	ZNF204P	-896875	0.000314265	0.299914	2e-09
breast cancer	6_26993501	rs34546498	ENSG00000112812.15	PRSS16	-254200	1.9e-06	0.685762	9e-10
breast cancer	6_26993501	rs34546498	ENSG00000124613.8	ZNF391	-381114	0.000192186	0.567564	9e-10
breast cancer	6_26993501	rs34546498	ENSG00000186470.13	BTN3A2	628342	1.55e-28	-1.40526	9e-10
breast cancer	6_27307055	rs56114371	ENSG00000187626.8	ZKSCAN4	-945169	0.000258856	0.38078	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000216901.1	ZNF603P	-869133	0.000271399	0.579362	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000112812.15	PRSS16	59354	3.7e-06	0.628049	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000186470.13	BTN3A2	941896	3.16e-25	-1.26133	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000124613.8	ZNF391	-67560	4.11e-05	0.585249	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000220721.1	OR1F12P	-766261	9.63e-05	0.640138	2e-09
breast cancer	6_27457865	rs34196306	ENSG00000187626.8	ZKSCAN4	-794359	9.2e-05	0.44563	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000112812.15	PRSS16	210164	4.4e-05	0.611576	1e-09
breast cancer	6_27873148	rs45509595	ENSG00000124613.8	ZNF391	498533	0.000301682	0.548498	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000187626.8	ZKSCAN4	-379076	2.96e-05	0.45821	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000220721.1	OR1F12P	-200168	4.22e-05	0.709983	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000112812.15	PRSS16	625447	2.35e-05	0.610192	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000204789.4	ZNF204P	512927	9.98e-05	0.327699	5e-09
breast cancer	6_28106103	rs34662244	ENSG00000112812.15	PRSS16	858402	2.43e-05	0.598701	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000220721.1	OR1F12P	32787	5.3e-05	0.689071	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000216901.1	ZNF603P	-70085	0.000285741	0.600457	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000204789.4	ZNF204P	745882	4.73e-05	0.336099	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000187626.8	ZKSCAN4	-146121	6.79e-06	0.483411	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000124613.8	ZNF391	731488	8.35e-05	0.584954	3e-09
breast cancer	6_28364364	rs13214023	ENSG00000124613.8	ZNF391	989749	9.8e-05	0.592488	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000187626.8	ZKSCAN4	112140	1.35e-05	0.478844	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000220721.1	OR1F12P	291048	0.000106086	0.676881	1e-09
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	1.27e-05	0.36712	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	1.27e-05	0.273481	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	0.000367632	0.311858	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	8.85e-07	0.252528	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	1.27e-05	0.36712	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	1.27e-05	0.273481	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	0.000367632	0.311858	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	8.85e-07	0.252528	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	1.27e-05	0.36712	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	1.27e-05	0.273481	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	0.000367632	0.311858	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	8.85e-07	0.252528	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	1.27e-05	0.36712	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	1.27e-05	0.273481	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	0.000367632	0.311858	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	8.85e-07	0.252528	5e-07
breast cancer	6_29280372	rs3130834	ENSG00000239257.1	RPL23AP1	-446510	1.41e-06	0.618444	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000204644.9	ZFP57	-400738	9.29e-14	1.35359	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000066379.14	POLR1H	-781269	0.000140048	-0.328482	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000281831.1	HCP5B	-593411	5.51e-10	1.06896	5e-09
breast cancer	6_29388554	rs9257809	ENSG00000239257.1	RPL23AP1	-338328	1.66e-05	0.551197	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000066379.14	POLR1H	-673087	6.76e-05	-0.340363	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000281831.1	HCP5B	-485229	4.7e-09	1.00677	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204644.9	ZFP57	-292556	3.17e-13	1.31748	3e-08
breast cancer	6_29509637	rs1233480	ENSG00000239257.1	RPL23AP1	-217245	9.73e-05	0.430898	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000204644.9	ZFP57	-171473	6.58e-08	0.866322	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000281831.1	HCP5B	-364146	4.26e-07	0.756063	5e-08
breast cancer	6_29693039	rs3116813	ENSG00000176998.4	HCG4	-99397	7.72e-05	-0.692676	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000230795.3	HLA-K	-234139	0.000134957	-0.643744	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000066379.14	POLR1H	-368602	5.87e-05	-0.342185	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204644.9	ZFP57	11929	1.25e-14	1.37914	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000281831.1	HCP5B	-180744	1.91e-10	1.08283	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000239257.1	RPL23AP1	-33843	7.02e-06	0.572311	6e-07
breast cancer	6_29785031	rs147680653	ENSG00000066379.14	POLR1H	-276610	5.87e-05	-0.342185	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000176998.4	HCG4	-7405	7.72e-05	-0.692676	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000281831.1	HCP5B	-88752	1.91e-10	1.08283	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000204644.9	ZFP57	103921	1.25e-14	1.37914	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000239257.1	RPL23AP1	58149	7.02e-06	0.572311	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000230795.3	HLA-K	-142147	0.000134957	-0.643744	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000137312.14	FLOT1	-957702	8.3e-06	0.281869	1e-06
breast cancer	6_29882943	rs1611579	ENSG00000239257.1	RPL23AP1	156061	4.06e-05	0.500587	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000176998.4	HCG4	90507	2.79e-05	-0.698102	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000281831.1	HCP5B	9160	3.94e-11	1.06664	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000066379.14	POLR1H	-178698	9.78e-05	-0.316726	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204644.9	ZFP57	201833	1.19e-11	1.17639	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000230795.3	HLA-K	-44235	4.51e-05	-0.654121	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000137312.14	FLOT1	-859790	2.78e-06	0.281766	8e-07
breast cancer	6_30003183	rs3094146	ENSG00000239257.1	RPL23AP1	276301	8.32e-05	0.484624	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000176998.4	HCG4	210747	0.00012996	-0.645122	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000066379.14	POLR1H	-58458	0.00012344	-0.314756	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000230795.3	HLA-K	76005	4.7e-05	-0.657814	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204644.9	ZFP57	322073	8.91e-11	1.13954	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000281831.1	HCP5B	129400	6.12e-11	1.0656	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000137312.14	FLOT1	-739550	3.83e-06	0.280195	7e-07
breast cancer	6_30107326	rs2523992	ENSG00000281831.1	HCP5B	233543	5.13e-05	0.587509	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000204623.9	ZNRD1ASP	46073	8.88e-08	-0.371021	2e-07
breast cancer	6_30365728	rs3094054	ENSG00000239257.1	RPL23AP1	638846	2.85e-06	0.598738	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204540.10	PSORS1C1	-749022	3.15e-05	-0.731817	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204644.9	ZFP57	684618	2.97e-10	1.16323	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000176998.4	HCG4	573292	3.65e-05	-0.726771	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000137312.14	FLOT1	-377005	5.58e-06	0.288767	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000281831.1	HCP5B	491945	6.39e-07	0.869736	1e-07
breast cancer	6_30374976	rs115707823	ENSG00000204644.9	ZFP57	693866	3.98e-06	0.765454	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000281831.1	HCP5B	501193	5.16e-05	0.627443	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204644.9	ZFP57	693866	3.98e-06	0.765454	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000281831.1	HCP5B	501193	5.16e-05	0.627443	5e-07
breast cancer	6_30473526	rs3132615	ENSG00000137312.14	FLOT1	-269207	9.42e-07	0.294181	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204644.9	ZFP57	792416	1.67e-08	0.997678	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000239257.1	RPL23AP1	746644	7.03e-05	0.485836	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000281831.1	HCP5B	599743	2.04e-05	0.711537	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000176998.4	HCG4	681090	1.76e-05	-0.71494	2e-06
breast cancer	6_30576624	rs3132610	ENSG00000204540.10	PSORS1C1	-538126	8.19e-05	-0.678524	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000137312.14	FLOT1	-166109	4.47e-08	0.335896	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000239257.1	RPL23AP1	849742	4.31e-05	0.514844	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000281831.1	HCP5B	702841	5.24e-06	0.781837	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204536.13	CCHCR1	-581614	1.79e-05	0.48065	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204644.9	ZFP57	895514	4.19e-09	1.06766	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000176998.4	HCG4	784188	7.78e-06	-0.766296	1e-06
breast cancer	6_30682249	rs9262142	ENSG00000281831.1	HCP5B	808466	8.48e-06	0.753851	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000239257.1	RPL23AP1	955367	9.79e-05	0.484098	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204536.13	CCHCR1	-475989	1.42e-05	0.478999	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000176998.4	HCG4	889813	1e-05	-0.746238	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000137312.14	FLOT1	-60484	3.96e-08	0.332112	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204540.10	PSORS1C1	-432501	2.3e-05	-0.716088	3e-06
breast cancer	6_30793795	rs3129984	ENSG00000204536.13	CCHCR1	-364443	2.11e-05	0.476906	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000281831.1	HCP5B	920012	1.37e-05	0.748315	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204540.10	PSORS1C1	-320955	1.41e-05	-0.744817	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000137312.14	FLOT1	51062	6.61e-08	0.332002	8e-06
breast cancer	6_31347004	rs115392158	ENSG00000228789.6	HCG22	293554	0.000133755	-0.435484	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000277402.1	MIR6891	-8312	4.1e-07	-0.563511	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204540.10	PSORS1C1	232254	2.2e-06	-0.516309	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000244731.7	C4A	-635020	1.88e-07	-0.572057	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000228789.6	HCG22	293554	0.000133755	-0.435484	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000277402.1	MIR6891	-8312	4.1e-07	-0.563511	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204540.10	PSORS1C1	232254	2.2e-06	-0.516309	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000244731.7	C4A	-635020	1.88e-07	-0.572057	3e-07
breast cancer	6_32699696	rs147527678	ENSG00000244731.7	C4A	717672	1.64e-07	-0.635271	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	1.76e-09	-0.606242	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000204338.8	CYP21A1P	694007	1.56e-05	-0.510109	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000196126.11	HLA-DRB1	109848	3.58e-05	0.261323	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000223534.1	HLA-DQB1-AS1	39341	2.77e-05	-0.411798	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000244731.7	C4A	717672	1.64e-07	-0.635271	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	1.76e-09	-0.606242	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000204338.8	CYP21A1P	694007	1.56e-05	-0.510109	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000196126.11	HLA-DRB1	109848	3.58e-05	0.261323	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000223534.1	HLA-DQB1-AS1	39341	2.77e-05	-0.411798	5e-07
breast cancer	6_33272092	rs17215231	ENSG00000231500.6	RPS18	44	9.71e-30	-0.903224	9e-13
breast cancer	6_43259403	rs111342015	ENSG00000112667.12	DNPH1	29919	1.36e-18	-0.489203	9e-08
breast cancer	7_100437651	rs117911427	ENSG00000242294.6	STAG3L5P	101239	0.000112182	0.813583	7e-06
breast cancer	7_102478605	rs369574511	ENSG00000105808.17	RASA4	-138152	4.16e-05	0.389073	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000260097.2	SPDYE6	122161	4.33e-05	0.382738	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000161036.12	LRWD1	13676	8.73e-14	-0.513393	2e-07
breast cancer	7_144351809	rs62485509	ENSG00000204959.4	ARHGEF34P	64843	7.63e-05	-0.439735	4e-12
breast cancer	7_144351809	rs62485509	ENSG00000170356.8	OR2A20P	98852	1.11e-06	0.587237	4e-12
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	5.35e-06	0.48492	7e-12
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.21e-05	-0.426386	7e-12
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	5.35e-06	0.48492	4e-10
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.21e-05	-0.426386	4e-10
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	5.35e-06	0.48492	1e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.21e-05	-0.426386	1e-11
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	5.35e-06	0.48492	7e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.21e-05	-0.426386	7e-11
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	5.35e-06	0.48492	1e-08
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.21e-05	-0.426386	1e-08
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	5.35e-06	0.48492	2e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.21e-05	-0.426386	2e-11
breast cancer	7_144477198	rs13230714	ENSG00000271079.1	CTAGE15	905397	3.35e-05	-0.392228	1e-06
breast cancer	7_38712494	rs7794030	ENSG00000164556.7	FAM183BP	25457	6.18e-08	-0.453288	1e-06
breast cancer	7_38728314	rs1468348	ENSG00000164556.7	FAM183BP	41277	1.25e-11	-0.546745	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000277053.4	GTF2IP1	-541323	3.19e-12	-0.97119	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000123965.13	PMS2P5	-197743	1.43e-08	0.846006	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000263001.5	GTF2I	38706	5.73e-11	0.338177	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000196275.13	GTF2IRD2	-155178	5.13e-08	0.578771	5e-06
breast cancer	7_94484487	rs17268829	ENSG00000127995.16	CASD1	-24732	2.23e-05	-0.19761	5e-13
breast cancer	7_94484487	rs17268829	ENSG00000127995.16	CASD1	-24732	2.23e-05	-0.19761	4e-15
breast cancer	8_120102785	rs1519814	ENSG00000187955.11	COL14A1	43005	5.17e-11	-0.40301	8e-07