DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
breast cancer	1_10535965	rs2506889	ENSG00000175279.21	CENPS	105182	9.29e-05	0.0952042	2e-20
breast cancer	1_10536284	rs12375	ENSG00000175279.21	CENPS	105501	7.05e-05	0.0967024	1e-05
breast cancer	1_114128347	rs2774307	ENSG00000134207.14	SYT6	-25572	7.41e-06	-0.309817	8e-06
breast cancer	1_119716347	rs666930	ENSG00000092621.11	PHGDH	56549	2.7e-08	0.27293	5e-08
breast cancer	1_121121848	rs369304377	ENSG00000231752.5	EMBP1	-397264	0.000438156	-0.237064	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000223345.3	H2BP1	4591	2.25e-07	0.290735	2e-29
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	0.000196648	-0.205149	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	0.000215033	0.260715	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.15e-05	0.257319	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	0.000196648	-0.205149	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	0.000215033	0.260715	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.15e-05	0.257319	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	0.000196648	-0.205149	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	0.000215033	0.260715	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.15e-05	0.257319	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	0.000196648	-0.205149	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	0.000215033	0.260715	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.15e-05	0.257319	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	0.000196648	-0.205149	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	0.000215033	0.260715	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.15e-05	0.257319	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	0.000196648	-0.205149	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	0.000215033	0.260715	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.15e-05	0.257319	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	0.000196648	-0.205149	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	0.000215033	0.260715	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.15e-05	0.257319	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	0.000196648	-0.205149	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	0.000215033	0.260715	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.15e-05	0.257319	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	0.000196648	-0.205149	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	0.000215033	0.260715	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	1.15e-05	0.257319	3e-27
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	4.86e-10	0.374388	2e-07
breast cancer	1_145790097	rs12405132	ENSG00000117281.15	CD160	70626	4.11e-10	0.479758	2e-07
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	4.86e-10	0.374388	6e-10
breast cancer	1_145790097	rs12405132	ENSG00000117281.15	CD160	70626	4.11e-10	0.479758	6e-10
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	4.86e-10	0.374388	8e-09
breast cancer	1_145790097	rs12405132	ENSG00000117281.15	CD160	70626	4.11e-10	0.479758	8e-09
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	4.86e-10	0.374388	5e-09
breast cancer	1_145790097	rs12405132	ENSG00000117281.15	CD160	70626	4.11e-10	0.479758	5e-09
breast cancer	1_155176305	rs4971059	ENSG00000185499.16	MUC1	-16611	1.44e-07	0.242857	5e-11
breast cancer	1_155176305	rs4971059	ENSG00000185499.16	MUC1	-16611	1.44e-07	0.242857	2e-10
breast cancer	1_155212052	rs2974935	ENSG00000185499.16	MUC1	19136	2.12e-09	0.245289	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000177628.15	GBA	-32647	7.81e-06	-0.106604	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000169231.13	THBS3	4071	6.72e-10	0.224247	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000225855.6	RUSC1-AS1	-109635	2.54e-07	0.215392	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000236675.1	MTX1P1	-18923	2.35e-05	0.27728	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000163374.19	YY1AP1	-476722	1.06e-05	-0.193001	2e-07
breast cancer	1_155212373	rs2075570	ENSG00000185499.16	MUC1	19457	6.77e-09	0.236995	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000236675.1	MTX1P1	-18602	6.71e-05	0.26088	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000169231.13	THBS3	4392	5.96e-10	0.224012	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000177628.15	GBA	-32326	6.24e-06	-0.107286	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000225855.6	RUSC1-AS1	-109314	2.84e-07	0.213732	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000163374.19	YY1AP1	-476401	1.85e-05	-0.187145	5e-06
breast cancer	1_155216951	rs1057941	ENSG00000185499.16	MUC1	24035	3.83e-09	0.252612	2e-07
breast cancer	1_155302483	rs7524950	ENSG00000236675.1	MTX1P1	71508	8.84e-16	0.566356	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000177628.15	GBA	57784	1.46e-08	-0.149766	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000116521.10	SCAMP3	40053	1.76e-09	0.229007	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000225855.6	RUSC1-AS1	-19204	1.18e-07	0.247694	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000163374.19	YY1AP1	-386291	1.43e-15	-0.376591	3e-09
breast cancer	1_155446537	rs10796944	ENSG00000163374.19	YY1AP1	-242237	7.22e-26	-0.504485	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000177628.15	GBA	201838	2.13e-05	-0.120672	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000116521.10	SCAMP3	184107	3.87e-05	0.16896	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000225855.6	RUSC1-AS1	124850	7.55e-05	0.198508	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000236675.1	MTX1P1	215562	2.01e-09	0.459521	7e-10
breast cancer	1_155587180	rs12091730	ENSG00000163374.19	YY1AP1	-101594	3.72e-26	-0.509607	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000116521.10	SCAMP3	324750	3.42e-05	0.171002	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000225855.6	RUSC1-AS1	265493	3.98e-05	0.206915	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000236675.1	MTX1P1	356205	8.82e-10	0.471513	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000177628.15	GBA	342481	1.78e-05	-0.122423	2e-10
breast cancer	1_155697170	rs348196	ENSG00000177628.15	GBA	452471	1.55e-05	-0.124787	2e-08
breast cancer	1_155697170	rs348196	ENSG00000163374.19	YY1AP1	8396	8.04e-39	-0.604897	2e-08
breast cancer	1_155697170	rs348196	ENSG00000225855.6	RUSC1-AS1	375483	1.67e-06	0.24286	2e-08
breast cancer	1_155697170	rs348196	ENSG00000116521.10	SCAMP3	434740	6.38e-05	0.167271	2e-08
breast cancer	1_155697170	rs348196	ENSG00000236675.1	MTX1P1	466195	4.75e-09	0.457471	2e-08
breast cancer	1_156183252	rs11264454	ENSG00000196189.12	SEMA4A	35886	2.88e-12	0.323159	2e-08
breast cancer	1_156183252	rs11264454	ENSG00000196189.12	SEMA4A	35886	2.88e-12	0.323159	7e-07
breast cancer	1_16013277	rs1763604	ENSG00000233954.6	UQCRHL	203929	2.85e-06	-0.280209	7e-09
breast cancer	1_16013277	rs1763604	ENSG00000186510.11	CLCNKA	-5598	2.69e-05	-0.158635	7e-09
breast cancer	1_200372918	rs6677545	ENSG00000203721.6	LINC00862	-27787	9.15e-05	0.259012	4e-08
breast cancer	1_204546897	rs2290854	ENSG00000170382.11	LRRN2	-138836	9.18e-06	-0.255346	1e-07
breast cancer	1_204546897	rs2290854	ENSG00000133056.13	PIK3C2B	52173	1.21e-07	-0.194043	1e-07
breast cancer	1_204549714	rs4245739	ENSG00000133056.13	PIK3C2B	54990	2.2e-07	-0.189505	6e-15
breast cancer	1_204549714	rs4245739	ENSG00000133056.13	PIK3C2B	54990	2.2e-07	-0.189505	4e-06
breast cancer	1_204549714	rs4245739	ENSG00000133056.13	PIK3C2B	54990	2.2e-07	-0.189505	8e-18
breast cancer	1_204549714	rs4245739	ENSG00000133056.13	PIK3C2B	54990	2.2e-07	-0.189505	2e-12
breast cancer	1_204549714	rs4245739	ENSG00000133056.13	PIK3C2B	54990	2.2e-07	-0.189505	3e-23
breast cancer	1_207903511	rs2724379	ENSG00000284237.1	LINC02767	-55781	3.76e-08	-0.360811	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000234329.1	RPL7AP16	266643	2.14e-06	0.282384	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000117461.14	PIK3R3	-214567	2.5e-12	-0.263033	2e-07
breast cancer	1_46135245	rs1707302	ENSG00000232022.7	FAAHP1	-296884	2.36e-05	-0.241666	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000117461.14	PIK3R3	2209	1.49e-07	0.195429	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000232022.7	FAAHP1	-296884	2.36e-05	-0.241666	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000117461.14	PIK3R3	2209	1.49e-07	0.195429	3e-08
breast cancer	1_91555907	rs12134245	ENSG00000241318.3	WDR82P2	20314	2.88e-08	-0.289587	4e-06
breast cancer	10_121904429	rs7899628	ENSG00000226864.2	ATE1-AS1	-23883	1.71e-18	-0.404015	9e-10
breast cancer	10_122041907	rs2253762	ENSG00000226864.2	ATE1-AS1	113595	1.14e-05	0.216004	2e-09
breast cancer	10_21522558	rs11012730	ENSG00000204682.5	MIR1915HG	25296	6.71e-07	0.267628	3e-10
breast cancer	10_21533927	rs10828247	ENSG00000204682.5	MIR1915HG	36665	7.69e-06	0.243176	3e-13
breast cancer	10_21535798	rs10828249	ENSG00000204682.5	MIR1915HG	38536	8.68e-06	0.243593	5e-08
breast cancer	10_21545607	rs7098100	ENSG00000204682.5	MIR1915HG	48345	2.7e-05	0.228485	1e-18
breast cancer	10_21668300	rs2183271	ENSG00000204682.5	MIR1915HG	171038	9.32e-05	0.209201	3e-07
breast cancer	10_21744013	rs7072776	ENSG00000204682.5	MIR1915HG	246751	3.61e-05	-0.241939	8e-10
breast cancer	10_21744013	rs7072776	ENSG00000204682.5	MIR1915HG	246751	3.61e-05	-0.241939	2e-19
breast cancer	10_21744013	rs7072776	ENSG00000204682.5	MIR1915HG	246751	3.61e-05	-0.241939	4e-14
breast cancer	10_21744013	rs7072776	ENSG00000204682.5	MIR1915HG	246751	3.61e-05	-0.241939	2e-19
breast cancer	10_21744013	rs7072776	ENSG00000204682.5	MIR1915HG	246751	3.61e-05	-0.241939	1e-14
breast cancer	10_21863269	rs72806318	ENSG00000136770.10	DNAJC1	-140456	2.18e-07	0.862351	5e-19
breast cancer	10_22026914	rs11814448	ENSG00000136770.10	DNAJC1	23189	8.42e-05	0.36689	6e-18
breast cancer	10_22026914	rs11814448	ENSG00000136770.10	DNAJC1	23189	8.42e-05	0.36689	9e-16
breast cancer	10_22026914	rs11814448	ENSG00000136770.10	DNAJC1	23189	8.42e-05	0.36689	3e-13
breast cancer	10_22026914	rs11814448	ENSG00000136770.10	DNAJC1	23189	8.42e-05	0.36689	4e-18
breast cancer	10_22026914	rs11814448	ENSG00000136770.10	DNAJC1	23189	8.42e-05	0.36689	6e-17
breast cancer	10_22108073	rs72810771	ENSG00000136770.10	DNAJC1	104348	8.37e-06	0.549332	2e-19
breast cancer	10_22212015	rs16922097	ENSG00000136770.10	DNAJC1	208290	9.48e-05	0.515471	1e-18
breast cancer	10_27080233	rs7918232	ENSG00000283709.1	FAM238C	135815	2.85e-06	0.138971	8e-06
breast cancer	10_5752689	rs55910451	ENSG00000057608.16	GDI2	-89443	3.43e-11	-0.149677	4e-07
breast cancer	10_62303692	rs35419901	ENSG00000182010.10	RTKN2	34985	8.39e-06	0.191174	8e-11
breast cancer	10_92172529	rs72807246	ENSG00000228701.1	TNKS2-DT	374238	7.76e-05	0.311933	3e-06
breast cancer	11_111636465	rs505372	ENSG00000204370.9	SDHD	-450334	7.57e-05	-0.0814437	3e-06
breast cancer	11_111636465	rs505372	ENSG00000137713.15	PPP2R1B	-129962	3.86e-13	0.243685	3e-06
breast cancer	11_111765903	rs643506	ENSG00000137713.15	PPP2R1B	-524	1.92e-17	-0.283859	2e-07
breast cancer	11_117214494	rs77683187	ENSG00000149577.15	SIDT2	35761	4.68e-06	0.355553	2e-06
breast cancer	11_120362917	rs7924772	ENSG00000181264.8	TLCD5	37788	1.77e-05	0.113878	4e-08
breast cancer	11_1892909	rs576603	ENSG00000130595.17	TNNT3	-26653	1.9e-05	-0.261123	2e-08
breast cancer	11_1920716	rs909116	ENSG00000130595.17	TNNT3	1154	5.72e-05	-0.244443	7e-07
breast cancer	11_47325389	rs11039183	ENSG00000109919.9	MTCH2	-317234	1.08e-05	-0.0874485	6e-06
breast cancer	11_65815595	rs3903072	ENSG00000172500.12	FIBP	-72944	9.32e-05	-0.12758	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000255120.5	OVOL1-AS1	24727	2.71e-06	0.226057	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172757.12	CFL1	-46351	6.01e-07	0.133995	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172500.12	FIBP	-72944	9.32e-05	-0.12758	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000255120.5	OVOL1-AS1	24727	2.71e-06	0.226057	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172757.12	CFL1	-46351	6.01e-07	0.133995	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172500.12	FIBP	-72944	9.32e-05	-0.12758	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000255120.5	OVOL1-AS1	24727	2.71e-06	0.226057	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172757.12	CFL1	-46351	6.01e-07	0.133995	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172500.12	FIBP	-72944	9.32e-05	-0.12758	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000255120.5	OVOL1-AS1	24727	2.71e-06	0.226057	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172757.12	CFL1	-46351	6.01e-07	0.133995	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172500.12	FIBP	-72944	9.32e-05	-0.12758	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000255120.5	OVOL1-AS1	24727	2.71e-06	0.226057	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172757.12	CFL1	-46351	6.01e-07	0.133995	6e-12
breast cancer	11_65935052	rs617791	ENSG00000175334.7	BANF1	-67125	6.94e-08	0.149905	7e-06
breast cancer	11_65935052	rs617791	ENSG00000175376.8	EIF1AD	-67026	3.52e-08	0.293003	7e-06
breast cancer	11_66324772	rs118151305	ENSG00000174996.11	KLC2	67478	5.67e-13	0.466399	6e-09
breast cancer	11_66843174	rs7570	ENSG00000174851.15	YIF1A	554004	0.000232052	-0.145883	8e-06
breast cancer	11_66843174	rs7570	ENSG00000255468.6	B4GAT1-DT	495224	1.27e-07	0.304057	8e-06
breast cancer	11_66843174	rs7570	ENSG00000248746.5	ACTN3	296779	2.21e-10	0.345966	8e-06
breast cancer	11_66843174	rs7570	ENSG00000173653.7	RCE1	-238	0.000176612	0.132804	8e-06
breast cancer	11_68164294	rs4930561	ENSG00000110721.11	CHKA	42850	4.58e-06	-0.112107	3e-07
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	1.33e-28	0.502971	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177697.17	CD151	-29867	6.41e-07	0.176969	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177600.8	RPLP2	-6737	4.05e-10	0.202258	3e-12
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	1.33e-28	0.502971	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177697.17	CD151	-29867	6.41e-07	0.176969	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177600.8	RPLP2	-6737	4.05e-10	0.202258	1e-12
breast cancer	12_130560585	rs7975553	ENSG00000060709.14	RIMBP2	42668	3.25e-05	-0.213578	6e-06
breast cancer	12_24884534	rs10842422	ENSG00000060982.14	BCAT1	-64925	2.76e-13	0.242214	3e-06
breast cancer	12_49251457	rs11168936	ENSG00000186897.4	C1QL4	-85731	5.11e-05	-0.197762	9e-07
breast cancer	14_38968140	rs147032157	ENSG00000259083.1	PNN-AS1	-207740	3.54e-05	0.313266	4e-06
breast cancer	15_50402109	rs4774565	ENSG00000244879.6	GABPB1-AS1	46700	3.65e-14	-0.517077	2e-06
breast cancer	15_74300521	rs12904134	ENSG00000167195.7	GOLGA6C	-958078	0.000113765	0.204896	8e-06
breast cancer	15_74300521	rs12904134	ENSG00000140474.12	ULK3	-542676	8.54e-05	-0.123008	8e-06
breast cancer	15_74300521	rs12904134	ENSG00000138623.9	SEMA7A	-133946	8.6e-05	-0.182634	8e-06
breast cancer	15_74843920	rs6938	ENSG00000140474.12	ULK3	723	1.42e-10	-0.200074	9e-08
breast cancer	15_74843920	rs6938	ENSG00000178802.17	MPI	-46085	6.28e-07	0.18574	9e-08
breast cancer	15_74843920	rs6938	ENSG00000169371.13	SNUPN	-782549	3.08e-05	-0.184152	9e-08
breast cancer	15_74843920	rs6938	ENSG00000140497.16	SCAMP2	-29445	1.87e-10	0.374787	9e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	2.16e-09	0.219819	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000140497.16	SCAMP2	-18374	6.89e-11	0.381148	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000169371.13	SNUPN	-771478	1.39e-05	-0.190822	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	2.09e-14	-0.233637	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	2.16e-09	0.219819	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000140497.16	SCAMP2	-18374	6.89e-11	0.381148	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000169371.13	SNUPN	-771478	1.39e-05	-0.190822	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	2.09e-14	-0.233637	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	2.16e-09	0.219819	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000140497.16	SCAMP2	-18374	6.89e-11	0.381148	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000169371.13	SNUPN	-771478	1.39e-05	-0.190822	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	2.09e-14	-0.233637	5e-08
breast cancer	15_75516399	rs8027365	ENSG00000169371.13	SNUPN	-110070	4.84e-05	0.195605	1e-07
breast cancer	15_75516399	rs8027365	ENSG00000140400.16	MAN2C1	148245	1.04e-29	0.470357	1e-07
breast cancer	15_77977130	rs12906542	ENSG00000260776.5	GOLGA6FP	50284	1.42e-06	-0.219423	7e-07
breast cancer	15_77977130	rs12906542	ENSG00000214646.8	COMMD4P1	32548	2.17e-09	-0.325235	7e-07
breast cancer	15_77977130	rs12906542	ENSG00000261143.1	ADAMTS7P3	1088	1.93e-12	0.392428	7e-07
breast cancer	15_79777420	rs166870	ENSG00000136371.10	MTHFS	-119959	9.77e-09	-0.168763	3e-07
breast cancer	15_90965985	rs77554484	ENSG00000258384.1	RCCD1-AS1	10760	1.21e-10	-0.275949	1e-15
breast cancer	15_90965985	rs77554484	ENSG00000258725.1	PRC1-AS1	-6875	1.46e-10	-0.230009	1e-15
breast cancer	15_90965985	rs77554484	ENSG00000166965.12	RCCD1	10189	8.79e-62	1.00588	1e-15
breast cancer	15_90965985	rs77554484	ENSG00000184056.14	VPS33B	-56618	1.78e-06	-0.264289	1e-15
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	4.09e-28	0.629984	4e-08
breast cancer	15_90968837	rs2290203	ENSG00000184056.14	VPS33B	-53766	1.42e-06	-0.221946	4e-08
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	2.89e-07	-0.155308	4e-08
breast cancer	15_90968837	rs2290203	ENSG00000258384.1	RCCD1-AS1	13612	1.87e-06	-0.172978	4e-08
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	4.09e-28	0.629984	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000184056.14	VPS33B	-53766	1.42e-06	-0.221946	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	2.89e-07	-0.155308	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000258384.1	RCCD1-AS1	13612	1.87e-06	-0.172978	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	4.09e-28	0.629984	2e-19
breast cancer	15_90968837	rs2290203	ENSG00000184056.14	VPS33B	-53766	1.42e-06	-0.221946	2e-19
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	2.89e-07	-0.155308	2e-19
breast cancer	15_90968837	rs2290203	ENSG00000258384.1	RCCD1-AS1	13612	1.87e-06	-0.172978	2e-19
breast cancer	16_52532542	rs2193094	ENSG00000249231.7	CASC16	-119563	2.98e-06	-0.0986782	2e-07
breast cancer	16_52601252	rs3112612	ENSG00000249231.7	CASC16	-50853	2.3e-09	-0.118976	4e-10
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	5.62e-10	-0.301353	4e-08
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	5.62e-10	-0.301353	3e-10
breast cancer	16_56497273	rs2303282	ENSG00000125124.11	BBS2	-23010	1.26e-12	-0.334266	3e-07
breast cancer	16_71475893	rs8050871	ENSG00000167377.17	ZNF23	12798	2.7e-23	-0.420907	3e-06
breast cancer	16_71475893	rs8050871	ENSG00000157429.15	ZNF19	-89196	9.18e-11	0.239121	3e-06
breast cancer	17_30560116	rs111780165	ENSG00000266733.5	TBC1D29P	3004	2.07e-07	-0.293712	8e-08
breast cancer	17_30560116	rs111780165	ENSG00000108576.9	SLC6A4	324114	0.000101917	-0.393775	8e-08
breast cancer	17_30884649	rs7223535	ENSG00000176390.11	CRLF3	59873	1.55e-05	0.26431	4e-10
breast cancer	17_30887862	rs113934718	ENSG00000176390.11	CRLF3	63086	5.59e-05	0.245238	1e-08
breast cancer	17_30894259	rs62070652	ENSG00000176390.11	CRLF3	69483	5.59e-05	0.245238	1e-06
breast cancer	17_30894259	rs62070652	ENSG00000176390.11	CRLF3	69483	5.59e-05	0.245238	6e-09
breast cancer	17_35565049	rs2840044	ENSG00000006125.17	AP2B1	-21850	2.66e-05	0.109422	8e-06
breast cancer	17_41094871	rs150537328	ENSG00000108759.3	KRT32	-372558	7.65e-07	0.808002	2e-06
breast cancer	17_45394123	rs4763	ENSG00000214425.7	LRRC37A4P	-156212	4.57e-46	-1.08751	2e-08
breast cancer	17_45394123	rs4763	ENSG00000204652.6	RPS26P8	-214448	7.5e-07	0.20703	2e-08
breast cancer	17_45394123	rs4763	ENSG00000228696.8	ARL17B	-967674	7.54e-20	0.907615	2e-08
breast cancer	17_45394123	rs4763	ENSG00000262500.1	MAPK8IP1P1	-849483	5.94e-40	1.17172	2e-08
breast cancer	17_45394123	rs4763	ENSG00000159314.11	ARHGAP27	-40298	2.2e-07	-0.310794	2e-08
breast cancer	17_45394123	rs4763	ENSG00000263503.1	MAPK8IP1P2	-208217	1.43e-43	0.862228	2e-08
breast cancer	17_45394123	rs4763	ENSG00000204650.14	LINC02210	-226205	2.68e-39	0.636902	2e-08
breast cancer	17_45394123	rs4763	ENSG00000279685.2	MAPT-IT1	-501660	1.5e-12	0.503566	2e-08
breast cancer	17_45394123	rs4763	ENSG00000264070.1	DND1P1	-191748	1.25e-19	-0.547485	2e-08
breast cancer	17_45394123	rs4763	ENSG00000225190.10	PLEKHM1	-96626	2.12e-05	-0.265165	2e-08
breast cancer	17_45394123	rs4763	ENSG00000186868.15	MAPT	-500259	6.83e-57	1.11507	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214401.4	KANSL1-AS1	-799453	1.14e-35	1.12257	2e-08
breast cancer	17_45941122	rs62061734	ENSG00000228696.8	ARL17B	-420675	2.28e-31	1.03277	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214425.7	LRRC37A4P	390787	1.52e-63	-1.12361	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000073969.18	NSF	-649547	9.17e-11	0.244602	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000204650.14	LINC02210	320794	2.23e-62	0.693008	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000159314.11	ARHGAP27	506701	7.44e-09	-0.321397	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214401.4	KANSL1-AS1	-252454	3.52e-56	1.22777	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000279685.2	MAPT-IT1	45339	1.36e-12	0.47047	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000185829.17	ARL17A	-638560	3.18e-11	0.586958	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000264070.1	DND1P1	355251	5.42e-20	-0.514933	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000108379.9	WNT3	-891936	7.07e-08	0.316357	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000225190.10	PLEKHM1	450373	8.49e-10	-0.350448	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000204652.6	RPS26P8	332551	8.06e-11	0.249507	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000186868.15	MAPT	46740	5.53e-92	1.17971	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000262500.1	MAPK8IP1P1	-302484	1.09e-62	1.26898	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000263503.1	MAPK8IP1P2	338782	4.47e-69	0.930001	8e-12
breast cancer	17_46751565	rs199533	ENSG00000262500.1	MAPK8IP1P1	507959	2.4e-54	1.20056	5e-08
breast cancer	17_46751565	rs199533	ENSG00000185294.6	SPPL2C	906730	8.38e-05	0.111193	5e-08
breast cancer	17_46751565	rs199533	ENSG00000279685.2	MAPT-IT1	855782	2.1e-11	0.441508	5e-08
breast cancer	17_46751565	rs199533	ENSG00000214401.4	KANSL1-AS1	557989	1.15e-59	1.23585	5e-08
breast cancer	17_46751565	rs199533	ENSG00000073969.18	NSF	160896	1.87e-07	0.197064	5e-08
breast cancer	17_46751565	rs199533	ENSG00000108379.9	WNT3	-81493	1.19e-09	0.350233	5e-08
breast cancer	17_46751565	rs199533	ENSG00000263142.5	LRRC37A17P	-265628	6.68e-09	-0.380049	5e-08
breast cancer	17_46751565	rs199533	ENSG00000228696.8	ARL17B	389768	1.43e-33	1.04869	5e-08
breast cancer	17_46751565	rs199533	ENSG00000185829.17	ARL17A	171883	1.69e-12	0.613518	5e-08
breast cancer	17_46751565	rs199533	ENSG00000186868.15	MAPT	857183	8.13e-84	1.14187	5e-08
breast cancer	17_46788237	rs199498	ENSG00000262500.1	MAPK8IP1P1	544631	5.14e-38	1.04483	2e-08
breast cancer	17_46788237	rs199498	ENSG00000279685.2	MAPT-IT1	892454	4.69e-09	0.384278	2e-08
breast cancer	17_46788237	rs199498	ENSG00000263142.5	LRRC37A17P	-228956	1.3e-06	-0.31559	2e-08
breast cancer	17_46788237	rs199498	ENSG00000073969.18	NSF	197568	1.47e-06	0.180166	2e-08
breast cancer	17_46788237	rs199498	ENSG00000214401.4	KANSL1-AS1	594661	3.6e-39	1.05669	2e-08
breast cancer	17_46788237	rs199498	ENSG00000228696.8	ARL17B	426440	4.64e-27	0.946162	2e-08
breast cancer	17_46788237	rs199498	ENSG00000108379.9	WNT3	-44821	8.85e-09	0.327637	2e-08
breast cancer	17_46788237	rs199498	ENSG00000186868.15	MAPT	893855	1.17e-59	1.02775	2e-08
breast cancer	17_46788237	rs199498	ENSG00000185829.17	ARL17A	208555	3.86e-10	0.541557	2e-08
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	2.3e-10	-0.272556	2e-13
breast cancer	17_54979110	rs6504950	ENSG00000166260.10	COX11	10346	1.07e-13	0.412639	2e-13
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	2.3e-10	-0.272556	8e-09
breast cancer	17_54979110	rs6504950	ENSG00000166260.10	COX11	10346	1.07e-13	0.412639	8e-09
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	2.3e-10	-0.272556	1e-08
breast cancer	17_54979110	rs6504950	ENSG00000166260.10	COX11	10346	1.07e-13	0.412639	1e-08
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	2.3e-10	-0.272556	5e-12
breast cancer	17_54979110	rs6504950	ENSG00000166260.10	COX11	10346	1.07e-13	0.412639	5e-12
breast cancer	17_55132413	rs2787486	ENSG00000166260.10	COX11	163649	1.34e-09	0.331525	2e-34
breast cancer	17_55132413	rs2787486	ENSG00000141198.14	TOM1L1	233026	8.84e-07	-0.207718	2e-34
breast cancer	17_55132413	rs2787486	ENSG00000166260.10	COX11	163649	1.34e-09	0.331525	6e-29
breast cancer	17_55132413	rs2787486	ENSG00000141198.14	TOM1L1	233026	8.84e-07	-0.207718	6e-29
breast cancer	17_55135212	rs2628317	ENSG00000166260.10	COX11	166448	8.08e-12	0.3971	4e-16
breast cancer	17_55135212	rs2628317	ENSG00000141198.14	TOM1L1	235825	2.76e-09	-0.266494	4e-16
breast cancer	17_68557338	rs11655740	ENSG00000267659.5	LINC01482	-34458	5.43e-05	1.09142	7e-06
breast cancer	17_68904663	rs36059695	ENSG00000141338.13	ABCA8	-50729	6.71e-11	0.760729	6e-08
breast cancer	17_74776908	rs62084913	ENSG00000172794.19	RAB37	106330	1.44e-08	0.2525	9e-06
breast cancer	17_74776908	rs62084913	ENSG00000266036.1	SLC9A3R1-AS1	28296	5.97e-09	0.274202	9e-06
breast cancer	17_81211408	rs9913021	ENSG00000224877.3	NDUFAF8	-27831	3.1e-05	-0.180409	2e-06
breast cancer	17_82597601	rs62079673	ENSG00000141580.15	WDR45B	-50952	2.26e-05	0.14979	1e-06
breast cancer	17_82946434	rs898097	ENSG00000141560.14	FN3KRP	229751	7.78e-18	-0.335993	2e-06
breast cancer	18_22897971	rs12962334	ENSG00000101773.18	RBBP8	99710	0.000132495	-0.136323	4e-09
breast cancer	18_22897971	rs12962334	ENSG00000101773.18	RBBP8	99710	0.000132495	-0.136323	4e-08
breast cancer	18_22897971	rs12962334	ENSG00000101773.18	RBBP8	99710	0.000132495	-0.136323	1e-06
breast cancer	18_23047728	rs9675999	ENSG00000265939.1	UBE2CP2	146733	0.000112194	0.269001	7e-07
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	4.17e-17	0.533882	7e-21
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	4.17e-17	0.533882	1e-12
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	4.17e-17	0.533882	2e-06
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	4.17e-17	0.533882	4e-13
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	4.17e-17	0.533882	9e-13
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	4.17e-17	0.533882	2e-09
breast cancer	19_17279482	rs4808075	ENSG00000160117.14	ANKLE1	-2163	6.88e-09	0.332997	4e-07
breast cancer	19_17279482	rs4808075	ENSG00000160117.14	ANKLE1	-2163	6.88e-09	0.332997	2e-09
breast cancer	19_17282085	rs8100241	ENSG00000127220.5	ABHD8	-28151	5.13e-11	-0.239322	4e-08
breast cancer	19_17282085	rs8100241	ENSG00000099330.8	OCEL1	55881	4.26e-05	-0.168117	4e-08
breast cancer	19_17282085	rs8100241	ENSG00000130312.6	MRPL34	-10747	1.67e-06	0.2059	4e-08
breast cancer	19_17283116	rs56069439	ENSG00000160117.14	ANKLE1	1471	9.47e-09	0.332042	1e-32
breast cancer	19_17283116	rs56069439	ENSG00000160117.14	ANKLE1	1471	9.47e-09	0.332042	8e-19
breast cancer	19_17283116	rs56069439	ENSG00000160117.14	ANKLE1	1471	9.47e-09	0.332042	9e-09
breast cancer	19_17283315	rs2363956	ENSG00000130312.6	MRPL34	-9517	4e-07	0.216756	2e-08
breast cancer	19_17283315	rs2363956	ENSG00000127220.5	ABHD8	-26921	3.32e-11	-0.240815	2e-08
breast cancer	19_17283315	rs2363956	ENSG00000130312.6	MRPL34	-9517	4e-07	0.216756	2e-06
breast cancer	19_17283315	rs2363956	ENSG00000127220.5	ABHD8	-26921	3.32e-11	-0.240815	2e-06
breast cancer	19_17290595	rs67397200	ENSG00000160117.14	ANKLE1	8950	2.43e-08	0.317112	3e-37
breast cancer	19_17290595	rs67397200	ENSG00000160117.14	ANKLE1	8950	2.43e-08	0.317112	2e-08
breast cancer	19_17290595	rs67397200	ENSG00000160117.14	ANKLE1	8950	2.43e-08	0.317112	3e-17
breast cancer	19_19417997	rs1469713	ENSG00000186010.18	NDUFA13	-97739	2.81e-21	-0.424017	1e-10
breast cancer	19_19417997	rs1469713	ENSG00000213996.12	TM6SF2	144606	5.4e-05	-0.255223	1e-10
breast cancer	19_19434887	rs2965183	ENSG00000186010.18	NDUFA13	-80849	1.13e-21	-0.429649	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000213996.12	TM6SF2	161496	3.95e-05	-0.260956	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000186010.18	NDUFA13	-80849	1.13e-21	-0.429649	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000213996.12	TM6SF2	161496	3.95e-05	-0.260956	6e-12
breast cancer	19_19535463	rs2304098	ENSG00000186010.18	NDUFA13	19727	2.4e-22	-0.434028	2e-11
breast cancer	19_19535463	rs2304098	ENSG00000213996.12	TM6SF2	262072	6.14e-05	-0.253681	2e-11
breast cancer	19_43484866	rs66849333	ENSG00000176531.10	PHLDB3	-20069	7.44e-19	0.479713	1e-06
breast cancer	19_43779080	rs1685191	ENSG00000159871.14	LYPD5	-48126	6.21e-13	0.475644	4e-20
breast cancer	19_43779080	rs1685191	ENSG00000104783.11	KCNN4	-2177	1.17e-13	0.489034	4e-20
breast cancer	19_43779080	rs1685191	ENSG00000176222.8	ZNF404	-104971	4.17e-05	-0.137369	4e-20
breast cancer	19_43782361	rs3760982	ENSG00000104783.11	KCNN4	1104	1.8e-16	0.531668	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	9.58e-17	0.535891	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.01e-05	-0.146297	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000104783.11	KCNN4	1104	1.8e-16	0.531668	2e-14
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	9.58e-17	0.535891	2e-14
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.01e-05	-0.146297	2e-14
breast cancer	19_43782361	rs3760982	ENSG00000104783.11	KCNN4	1104	1.8e-16	0.531668	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	9.58e-17	0.535891	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.01e-05	-0.146297	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000104783.11	KCNN4	1104	1.8e-16	0.531668	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	9.58e-17	0.535891	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.01e-05	-0.146297	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000104783.11	KCNN4	1104	1.8e-16	0.531668	1e-16
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	9.58e-17	0.535891	1e-16
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.01e-05	-0.146297	1e-16
breast cancer	19_43782361	rs3760982	ENSG00000104783.11	KCNN4	1104	1.8e-16	0.531668	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000159871.14	LYPD5	-44845	9.58e-17	0.535891	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	1.01e-05	-0.146297	5e-08
breast cancer	19_43919418	rs375066	ENSG00000267191.1	ZNF45-AS1	17417	8.84e-05	0.311748	2e-14
breast cancer	19_43919418	rs375066	ENSG00000176222.8	ZNF404	35367	1.94e-07	-0.180628	2e-14
breast cancer	19_43919418	rs375066	ENSG00000159871.14	LYPD5	92212	1.8e-14	0.526123	2e-14
breast cancer	19_43919418	rs375066	ENSG00000104783.11	KCNN4	138161	4.05e-17	0.571277	2e-14
breast cancer	19_50659499	rs62112521	ENSG00000235034.6	C19orf81	10054	2.52e-05	0.407307	9e-06
breast cancer	19_51869723	rs10411161	ENSG00000269235.1	ZNF350-AS1	-79411	1.88e-05	0.336961	7e-06
breast cancer	19_51942133	rs8113308	ENSG00000256683.6	ZNF350	-44723	3.47e-05	-0.383096	6e-07
breast cancer	19_51942133	rs8113308	ENSG00000269235.1	ZNF350-AS1	-7001	2.48e-25	0.661515	6e-07
breast cancer	19_51942133	rs8113308	ENSG00000176024.17	ZNF613	14986	1.04e-05	-0.402959	6e-07
breast cancer	2_171568284	rs11675683	ENSG00000071967.11	CYBRD1	46037	3.83e-05	-0.0841492	4e-08
breast cancer	2_201258707	rs3769821	ENSG00000155749.12	FLACC1	-98691	3.26e-23	-0.310362	4e-18
breast cancer	2_201258707	rs3769821	ENSG00000064012.21	CASP8	25264	2.23e-07	0.316499	4e-18
breast cancer	2_201279205	rs10931936	ENSG00000064012.21	CASP8	45762	5.1e-06	0.295734	6e-06
breast cancer	2_201279205	rs10931936	ENSG00000155749.12	FLACC1	-78193	1.05e-23	-0.330546	6e-06
breast cancer	2_201288355	rs1035142	ENSG00000155749.12	FLACC1	-69043	3.89e-38	-0.369604	3e-09
breast cancer	2_201288355	rs1035142	ENSG00000064012.21	CASP8	54912	4.43e-16	0.465172	3e-09
breast cancer	2_201288502	rs700635	ENSG00000155749.12	FLACC1	-68896	4.04e-23	-0.328116	5e-16
breast cancer	2_201288502	rs700635	ENSG00000064012.21	CASP8	55059	7.19e-06	0.292282	5e-16
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	7.19e-06	0.292282	6e-24
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	4.04e-23	-0.328116	6e-24
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	7.19e-06	0.292282	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	4.04e-23	-0.328116	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	7.19e-06	0.292282	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	4.04e-23	-0.328116	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	7.19e-06	0.292282	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	4.04e-23	-0.328116	7e-07
breast cancer	2_201384985	rs2714486	ENSG00000155749.12	FLACC1	27587	3.46e-12	0.280233	7e-10
breast cancer	2_201384985	rs2714486	ENSG00000115993.12	TRAK2	-66594	2.45e-05	0.133426	7e-10
breast cancer	2_201502866	rs77688320	ENSG00000155749.12	FLACC1	145468	5.02e-09	0.253293	3e-09
breast cancer	2_217427435	rs11693806	ENSG00000231672.6	DIRC3	-329158	8.81e-09	-0.38774	3e-26
breast cancer	2_217431785	rs16857609	ENSG00000231672.6	DIRC3	-324808	2.39e-06	0.331232	2e-25
breast cancer	2_217431785	rs16857609	ENSG00000231672.6	DIRC3	-324808	2.39e-06	0.331232	2e-31
breast cancer	2_217431785	rs16857609	ENSG00000231672.6	DIRC3	-324808	2.39e-06	0.331232	7e-06
breast cancer	2_217431785	rs16857609	ENSG00000231672.6	DIRC3	-324808	2.39e-06	0.331232	1e-15
breast cancer	2_217431785	rs16857609	ENSG00000231672.6	DIRC3	-324808	2.39e-06	0.331232	2e-08
breast cancer	2_217431785	rs16857609	ENSG00000231672.6	DIRC3	-324808	2.39e-06	0.331232	1e-17
breast cancer	2_217432009	rs16857611	ENSG00000231672.6	DIRC3	-324584	2.28e-06	0.331674	8e-07
breast cancer	2_24748307	rs6710503	ENSG00000084676.15	NCOA1	256393	6.41e-07	0.148961	5e-06
breast cancer	2_24748307	rs6710503	ENSG00000138092.10	CENPO	-45076	1.34e-05	0.19275	5e-06
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	6.24e-07	0.303266	5e-09
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	6.24e-07	0.303266	3e-06
breast cancer	2_28897867	rs4577244	ENSG00000171103.10	TRMT61B	27566	1.12e-06	0.295976	2e-09
breast cancer	2_38150263	rs184577	ENSG00000138061.11	CYP1B1	40361	7.35e-05	-0.223884	4e-06
breast cancer	2_38150263	rs184577	ENSG00000232973.11	CYP1B1-AS1	76816	4.43e-05	-0.280548	4e-06
breast cancer	2_41931164	rs17029056	ENSG00000205086.6	LINC02898	-23102	1.62e-20	-0.754412	4e-06
breast cancer	2_69900097	rs6716937	ENSG00000124380.10	SNRNP27	6537	2.09e-13	-0.32448	4e-07
breast cancer	20_34000289	rs2284378	ENSG00000101464.10	PIGU	-676796	6.24e-05	0.245043	1e-08
breast cancer	20_34000289	rs2284378	ENSG00000101460.12	MAP1LC3A	-546565	3.91e-09	0.310089	1e-08
breast cancer	20_34002002	rs2300206	ENSG00000101464.10	PIGU	-675083	6.24e-05	0.245043	6e-06
breast cancer	20_34002002	rs2300206	ENSG00000101460.12	MAP1LC3A	-544852	3.91e-09	0.310089	6e-06
breast cancer	20_34002002	rs2300206	ENSG00000101464.10	PIGU	-675083	6.24e-05	0.245043	2e-08
breast cancer	20_34002002	rs2300206	ENSG00000101460.12	MAP1LC3A	-544852	3.91e-09	0.310089	2e-08
breast cancer	20_34131991	rs11907546	ENSG00000101460.12	MAP1LC3A	-414863	4.14e-07	0.255669	3e-09
breast cancer	20_34131991	rs11907546	ENSG00000181741.7	FDX1P1	-344213	0.000182966	0.307774	3e-09
breast cancer	20_34131991	rs11907546	ENSG00000101464.10	PIGU	-545094	6.71e-05	0.232062	3e-09
breast cancer	20_34131991	rs11907546	ENSG00000101460.12	MAP1LC3A	-414863	4.14e-07	0.255669	3e-06
breast cancer	20_34131991	rs11907546	ENSG00000181741.7	FDX1P1	-344213	0.000182966	0.307774	3e-06
breast cancer	20_34131991	rs11907546	ENSG00000101464.10	PIGU	-545094	6.71e-05	0.232062	3e-06
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	2.8e-07	-0.239303	6e-09
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	2.8e-07	-0.239303	4e-07
breast cancer	22_29273659	rs4820803	ENSG00000100263.13	RHBDD3	5681	0.00014875	0.149499	2e-06
breast cancer	22_30027471	rs12537	ENSG00000100325.14	ASCC2	189167	1.38e-12	-0.299483	9e-07
breast cancer	22_30027471	rs12537	ENSG00000184117.11	NIPSNAP1	446134	1.01e-05	-0.123209	9e-07
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	1.81e-17	-0.981923	9e-14
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	1.81e-17	-0.981923	3e-17
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	1.81e-17	-0.981923	4e-06
breast cancer	22_40143521	rs12483853	ENSG00000229999.6	SGSM3-AS1	-244769	2.83e-07	-0.429898	1e-18
breast cancer	22_40480230	rs6001930	ENSG00000229999.6	SGSM3-AS1	91940	1.67e-09	-0.528003	2e-20
breast cancer	22_40480230	rs6001930	ENSG00000229999.6	SGSM3-AS1	91940	1.67e-09	-0.528003	9e-19
breast cancer	22_40480230	rs6001930	ENSG00000229999.6	SGSM3-AS1	91940	1.67e-09	-0.528003	2e-06
breast cancer	22_40480230	rs6001930	ENSG00000229999.6	SGSM3-AS1	91940	1.67e-09	-0.528003	5e-34
breast cancer	22_40480230	rs6001930	ENSG00000229999.6	SGSM3-AS1	91940	1.67e-09	-0.528003	2e-06
breast cancer	22_40480230	rs6001930	ENSG00000229999.6	SGSM3-AS1	91940	1.67e-09	-0.528003	4e-14
breast cancer	22_40480230	rs6001930	ENSG00000229999.6	SGSM3-AS1	91940	1.67e-09	-0.528003	4e-34
breast cancer	22_40480230	rs6001930	ENSG00000229999.6	SGSM3-AS1	91940	1.67e-09	-0.528003	2e-11
breast cancer	22_40481631	rs6001932	ENSG00000229999.6	SGSM3-AS1	93341	3.88e-09	-0.50079	7e-09
breast cancer	22_40600363	rs17002034	ENSG00000232564.3	MRTFA-AS1	78563	3.69e-05	-0.252422	6e-11
breast cancer	22_40600363	rs17002034	ENSG00000229999.6	SGSM3-AS1	212073	8.78e-07	-0.435856	6e-11
breast cancer	22_40619879	rs5995881	ENSG00000229999.6	SGSM3-AS1	231589	4.44e-05	-0.35257	4e-16
breast cancer	22_40623944	rs6001982	ENSG00000232564.3	MRTFA-AS1	102144	0.000132076	-0.22844	1e-34
breast cancer	22_40623944	rs6001982	ENSG00000229999.6	SGSM3-AS1	235654	2.16e-05	-0.369103	1e-34
breast cancer	22_40868537	rs62237039	ENSG00000229999.6	SGSM3-AS1	480247	2.15e-05	-0.692697	5e-09
breast cancer	22_41221553	rs140614180	ENSG00000229999.6	SGSM3-AS1	833263	4.25e-05	-0.902782	6e-08
breast cancer	22_42745087	rs4820477	ENSG00000128274.15	A4GALT	23789	8.99e-17	-0.391847	9e-07
breast cancer	3_100004736	rs9833888	ENSG00000235156.5	TMEM30CP	-180951	2.05e-06	-0.211996	5e-10
breast cancer	3_100004736	rs9833888	ENSG00000184220.11	CMSS1	186902	6.75e-06	0.2188	5e-10
breast cancer	3_100004736	rs9833888	ENSG00000235156.5	TMEM30CP	-180951	2.05e-06	-0.211996	3e-10
breast cancer	3_100004736	rs9833888	ENSG00000184220.11	CMSS1	186902	6.75e-06	0.2188	3e-10
breast cancer	3_100105841	rs9837602	ENSG00000184220.11	CMSS1	288007	7e-06	0.219235	1e-09
breast cancer	3_100105841	rs9837602	ENSG00000235156.5	TMEM30CP	-79846	1.54e-06	-0.215216	1e-09
breast cancer	3_100149260	rs9289981	ENSG00000235156.5	TMEM30CP	-36427	5.1e-11	-0.253787	4e-10
breast cancer	3_141547651	rs6776003	ENSG00000177311.11	ZBTB38	223438	5.73e-06	0.133301	3e-10
breast cancer	3_156645453	rs2136690	ENSG00000240875.5	LINC00886	-171609	1.63e-08	-0.346214	4e-06
breast cancer	3_156927968	rs7637701	ENSG00000240875.5	LINC00886	110906	6.19e-17	-0.459725	1e-06
breast cancer	3_34938860	rs6789440	ENSG00000235534.1	FECHP1	66219	8.28e-06	0.369848	3e-06
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	6.42e-08	0.585341	7e-16
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	6.42e-08	0.585341	2e-08
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	6.42e-08	0.585341	6e-15
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	6.42e-08	0.585341	8e-07
breast cancer	3_63956021	rs3821902	ENSG00000163635.17	ATXN7	91464	3.14e-05	-0.238255	3e-12
breast cancer	3_63982224	rs1053338	ENSG00000163635.17	ATXN7	117667	4.86e-05	-0.233119	2e-07
breast cancer	3_63982224	rs1053338	ENSG00000163635.17	ATXN7	117667	4.86e-05	-0.233119	7e-10
breast cancer	3_63982224	rs1053338	ENSG00000163635.17	ATXN7	117667	4.86e-05	-0.233119	9e-09
breast cancer	3_63982224	rs1053338	ENSG00000163635.17	ATXN7	117667	4.86e-05	-0.233119	5e-11
breast cancer	4_38814717	rs6815814	ENSG00000174125.7	TLR1	9139	8.43e-07	0.289104	6e-13
breast cancer	4_38814717	rs6815814	ENSG00000197712.11	FAM114A1	-52960	1.68e-10	0.239275	6e-13
breast cancer	4_38814717	rs6815814	ENSG00000174125.7	TLR1	9139	8.43e-07	0.289104	1e-11
breast cancer	4_38814717	rs6815814	ENSG00000197712.11	FAM114A1	-52960	1.68e-10	0.239275	1e-11
breast cancer	4_57013626	rs4865169	ENSG00000084093.16	REST	105750	2.89e-05	0.0984125	7e-06
breast cancer	5_128098106	rs1112956	ENSG00000245937.7	SLC12A2-DT	14934	1.25e-12	0.444685	9e-06
breast cancer	5_132304843	rs6860806	ENSG00000158987.20	RAPGEF6	669607	7.89e-05	-0.200972	3e-08
breast cancer	5_132304843	rs6860806	ENSG00000233006.6	MIR3936HG	-64805	1.34e-05	0.269763	3e-08
breast cancer	5_132304843	rs6860806	ENSG00000072682.18	P4HA2	9528	1.05e-12	0.279529	3e-08
breast cancer	5_132304843	rs6860806	ENSG00000158987.20	RAPGEF6	669607	7.89e-05	-0.200972	8e-08
breast cancer	5_132304843	rs6860806	ENSG00000233006.6	MIR3936HG	-64805	1.34e-05	0.269763	8e-08
breast cancer	5_132304843	rs6860806	ENSG00000072682.18	P4HA2	9528	1.05e-12	0.279529	8e-08
breast cancer	5_132466255	rs2522057	ENSG00000131435.12	PDLIM4	208584	4.01e-06	-0.196813	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000072682.18	P4HA2	170940	1.01e-17	-0.332356	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	2.26e-07	-0.32118	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000131435.12	PDLIM4	208584	4.01e-06	-0.196813	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000072682.18	P4HA2	170940	1.01e-17	-0.332356	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	2.26e-07	-0.32118	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000131435.12	PDLIM4	208584	4.01e-06	-0.196813	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000072682.18	P4HA2	170940	1.01e-17	-0.332356	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	2.26e-07	-0.32118	1e-08
breast cancer	5_132497907	rs736801	ENSG00000131435.12	PDLIM4	240236	0.000240186	0.161446	8e-08
breast cancer	5_132497907	rs736801	ENSG00000233006.6	MIR3936HG	128259	7.61e-07	0.314373	8e-08
breast cancer	5_132497907	rs736801	ENSG00000072682.18	P4HA2	202592	4.1e-15	0.314588	8e-08
breast cancer	5_133071366	rs6596100	ENSG00000170606.14	HSPA4	19404	5.35e-15	0.264496	2e-08
breast cancer	5_133071366	rs6596100	ENSG00000170606.14	HSPA4	19404	5.35e-15	0.264496	8e-09
breast cancer	5_149053986	rs250677	ENSG00000250072.5	SH3TC2-DT	-9331	3.81e-07	-0.279257	8e-06
breast cancer	5_149053986	rs250677	ENSG00000169247.11	SH3TC2	-9177	4.03e-08	0.211582	8e-06
breast cancer	5_154976135	rs6890610	ENSG00000155508.13	CNOT8	118582	4.9e-14	-0.380495	6e-06
breast cancer	5_164462274	rs6556756	ENSG00000253236.1	LINC02143	-2588	0.00010071	0.291438	5e-07
breast cancer	5_45653810	rs2589161	ENSG00000164588.6	HCN1	-42688	5.7e-05	0.273947	3e-08
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	4.89e-07	0.108529	3e-27
breast cancer	5_56736057	rs889312	ENSG00000095015.5	MAP3K1	-79517	2.04e-05	0.0820636	3e-27
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	4.89e-07	0.108529	5e-09
breast cancer	5_56736057	rs889312	ENSG00000095015.5	MAP3K1	-79517	2.04e-05	0.0820636	5e-09
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	4.89e-07	0.108529	1e-39
breast cancer	5_56736057	rs889312	ENSG00000095015.5	MAP3K1	-79517	2.04e-05	0.0820636	1e-39
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	4.89e-07	0.108529	3e-36
breast cancer	5_56736057	rs889312	ENSG00000095015.5	MAP3K1	-79517	2.04e-05	0.0820636	3e-36
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	4.89e-07	0.108529	7e-20
breast cancer	5_56736057	rs889312	ENSG00000095015.5	MAP3K1	-79517	2.04e-05	0.0820636	7e-20
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	4.89e-07	0.108529	1e-08
breast cancer	5_56736057	rs889312	ENSG00000095015.5	MAP3K1	-79517	2.04e-05	0.0820636	1e-08
breast cancer	5_56737113	rs1862626	ENSG00000095015.5	MAP3K1	-78461	1.52e-05	0.0826547	4e-12
breast cancer	5_56737113	rs1862626	ENSG00000155542.11	SETD9	-172147	7.15e-07	0.106238	4e-12
breast cancer	5_56977866	rs10036895	ENSG00000155542.11	SETD9	68606	1.18e-08	0.116367	2e-12
breast cancer	5_81972251	rs111549985	ENSG00000152348.15	ATG10	226	3.11e-63	0.903486	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000186468.12	RPS23	-306326	6.52e-33	-0.563446	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000205464.11	ATP6AP1L	-307211	5.67e-08	0.318229	6e-12
breast cancer	5_82161539	rs2407064	ENSG00000152348.15	ATG10	189514	1.16e-50	-0.822798	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000205464.11	ATP6AP1L	-117923	1.94e-07	-0.298339	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000186468.12	RPS23	-117038	8.44e-33	0.548941	3e-08
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	2.3e-48	-0.812851	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	2.57e-07	-0.296441	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.82e-33	0.555205	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	2.3e-48	-0.812851	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	2.57e-07	-0.296441	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.82e-33	0.555205	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	2.3e-48	-0.812851	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	2.57e-07	-0.296441	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.82e-33	0.555205	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	2.3e-48	-0.812851	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	2.57e-07	-0.296441	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.82e-33	0.555205	1e-12
breast cancer	5_82340549	rs2407156	ENSG00000186468.12	RPS23	61972	3.7e-22	-0.448773	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000152348.15	ATG10	368524	3.26e-26	0.6177	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000205464.11	ATP6AP1L	61087	6.27e-07	0.276385	2e-06
breast cancer	6_127279485	rs2180341	ENSG00000093144.18	ECHDC1	-64124	2.09e-21	-0.460698	3e-08
breast cancer	6_127279485	rs2180341	ENSG00000118518.15	RNF146	12875	9.05e-09	-0.258383	3e-08
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.99e-16	-0.455396	3e-12
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.99e-16	-0.455396	8e-10
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.99e-16	-0.455396	4e-08
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.99e-16	-0.455396	2e-12
breast cancer	6_149255943	rs7758080	ENSG00000225924.2	TAB2-AS1	-1608	8.25e-06	0.167324	1e-10
breast cancer	6_149287738	rs9485372	ENSG00000225924.2	TAB2-AS1	30187	5.72e-06	0.198425	4e-06
breast cancer	6_149287738	rs9485372	ENSG00000225924.2	TAB2-AS1	30187	5.72e-06	0.198425	8e-12
breast cancer	6_149287738	rs9485372	ENSG00000225924.2	TAB2-AS1	30187	5.72e-06	0.198425	4e-12
breast cancer	6_152034021	rs9479169	ENSG00000091831.22	ESR1	377330	5.08e-09	0.22829	1e-07
breast cancer	6_21903302	rs7760611	ENSG00000272168.6	CASC15	238530	1.36e-10	0.244178	2e-09
breast cancer	6_21903302	rs7760611	ENSG00000272168.6	CASC15	238530	1.36e-10	0.244178	2e-09
breast cancer	6_21905495	rs9350395	ENSG00000272168.6	CASC15	240723	2.24e-08	0.221265	3e-07
breast cancer	6_25710343	rs68006638	ENSG00000186470.13	BTN3A2	-654816	5.86e-23	-1.21351	2e-07
breast cancer	6_25874195	rs13198474	ENSG00000186470.13	BTN3A2	-490964	5.37e-22	-1.20472	2e-07
breast cancer	6_26175638	rs17598658	ENSG00000186470.13	BTN3A2	-189521	9e-25	-1.22542	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000026950.16	BTN3A1	61109	0.000242556	0.322891	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000186470.13	BTN3A2	98187	1.38e-28	-1.26099	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000124508.16	BTN2A2	80250	7.79e-05	0.335166	2e-09
breast cancer	6_26993501	rs34546498	ENSG00000124508.16	BTN2A2	610405	9.84e-05	0.339073	9e-10
breast cancer	6_26993501	rs34546498	ENSG00000197153.4	H3C12	-897309	2.89e-15	1.20738	9e-10
breast cancer	6_26993501	rs34546498	ENSG00000186470.13	BTN3A2	628342	5.82e-28	-1.28164	9e-10
breast cancer	6_27307055	rs56114371	ENSG00000219392.1	ZNF602P	-808573	5.5e-10	-0.814106	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000197153.4	H3C12	-583755	4.09e-15	1.16425	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000217539.2	IQCB2P	-703668	4.6e-07	0.760355	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000182477.5	OR2B8P	-747110	4.03e-08	0.820097	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000186470.13	BTN3A2	941896	9.65e-25	-1.17851	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000124508.16	BTN2A2	923959	0.000131007	0.322822	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000187626.8	ZKSCAN4	-945169	4.45e-06	0.3102	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000237154.2	MCFD2P1	-100642	0.000127519	0.5173	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000187763.3	OR2B7P	-739379	0.000285571	0.551755	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000216901.1	ZNF603P	-869133	3.28e-08	0.774435	2e-09
breast cancer	6_27457865	rs34196306	ENSG00000217539.2	IQCB2P	-552858	4.73e-07	0.780972	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000182477.5	OR2B8P	-596300	7.94e-09	0.883626	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000187626.8	ZKSCAN4	-794359	4.49e-05	0.284754	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000216901.1	ZNF603P	-718323	3.44e-08	0.795092	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000197153.4	H3C12	-432945	1.08e-15	1.21927	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000187763.3	OR2B7P	-588569	2.34e-05	0.658497	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000237154.2	MCFD2P1	50168	0.000243419	0.509919	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000219392.1	ZNF602P	-657763	1.89e-10	-0.857685	1e-09
breast cancer	6_27873148	rs45509595	ENSG00000217539.2	IQCB2P	-137575	6.17e-07	0.765682	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000182477.5	OR2B8P	-181017	2.1e-08	0.85108	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000225595.2	LINC01623	-991482	3.64e-15	1.04152	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000187626.8	ZKSCAN4	-379076	9.37e-06	0.305252	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000197153.4	H3C12	-17662	4.06e-16	1.22293	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000237154.2	MCFD2P1	465451	0.000124334	0.527354	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000216901.1	ZNF603P	-303040	7.29e-08	0.76911	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000187763.3	OR2B7P	-173286	1.7e-05	0.662414	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000219392.1	ZNF602P	-242480	1.43e-10	-0.854399	5e-09
breast cancer	6_28106103	rs34662244	ENSG00000237154.2	MCFD2P1	698406	0.000107234	0.528509	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000182477.5	OR2B8P	51938	7.7e-09	0.869432	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000187626.8	ZKSCAN4	-146121	4.01e-06	0.314945	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000217539.2	IQCB2P	95380	3.95e-07	0.772836	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000219392.1	ZNF602P	-9525	1.86e-10	-0.843542	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000204713.10	TRIM27	-817886	0.000120568	-0.185768	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000216901.1	ZNF603P	-70085	1.57e-08	0.799947	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000225595.2	LINC01623	-758527	2.99e-16	1.0699	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000197153.4	H3C12	215293	1.15e-15	1.1977	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000187763.3	OR2B7P	59669	1.34e-05	0.665722	3e-09
breast cancer	6_28364364	rs13214023	ENSG00000216901.1	ZNF603P	188176	1.97e-07	0.746584	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000237154.2	MCFD2P1	956667	0.00010899	0.533144	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000187626.8	ZKSCAN4	112140	2.35e-05	0.292623	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000218069.2	RSL24D1P1	583253	0.000170652	0.480809	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000182477.5	OR2B8P	310199	4.46e-08	0.834428	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000204713.10	TRIM27	-559625	0.000305625	-0.17643	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000187763.3	OR2B7P	317930	5.32e-05	0.625404	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000219392.1	ZNF602P	248736	1.42e-08	-0.763892	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000230598.1	OR2H4P	-850872	5.69e-08	0.658138	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000225595.2	LINC01623	-500266	7.78e-18	1.12977	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000217539.2	IQCB2P	353641	8.35e-06	0.689391	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000197153.4	H3C12	473554	3.01e-15	1.19347	1e-09
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	1.47e-06	0.208931	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000227214.2	HCG15	-27760	0.000363734	-0.217421	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000230598.1	OR2H4P	-256793	1.24e-05	0.273278	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	0.00021621	0.0922874	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	8.61e-05	0.290985	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000204709.4	LINC01556	14566	3.48e-09	0.290526	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	1.47e-06	0.208931	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000227214.2	HCG15	-27760	0.000363734	-0.217421	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000230598.1	OR2H4P	-256793	1.24e-05	0.273278	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	0.00021621	0.0922874	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	8.61e-05	0.290985	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000204709.4	LINC01556	14566	3.48e-09	0.290526	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	1.47e-06	0.208931	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000227214.2	HCG15	-27760	0.000363734	-0.217421	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000230598.1	OR2H4P	-256793	1.24e-05	0.273278	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	0.00021621	0.0922874	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	8.61e-05	0.290985	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000204709.4	LINC01556	14566	3.48e-09	0.290526	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	1.47e-06	0.208931	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000227214.2	HCG15	-27760	0.000363734	-0.217421	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000230598.1	OR2H4P	-256793	1.24e-05	0.273278	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000204713.10		34454	0.00021621	0.0922874	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000216901.1		782255	8.61e-05	0.290985	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000204709.4	LINC01556	14566	3.48e-09	0.290526	3e-07
breast cancer	6_29280372	rs3130834	ENSG00000225595.2	LINC01623	415742	2.83e-18	1.13882	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000230598.1	OR2H4P	65136	2.28e-08	0.674174	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000228078.1	HLA-U	-653729	9.7e-05	0.626459	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000281831.1	HCP5B	-593411	3.71e-05	0.639439	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000233916.1	ZDHHC20P1	-428175	1.42e-11	0.85257	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000204713.10	TRIM27	356383	0.000154868	-0.183997	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000235821.1	IFITM4P	-470776	0.000150074	-0.515119	5e-09
breast cancer	6_29388554	rs9257809	ENSG00000204632.11	HLA-G	-438413	0.000263623	-0.435885	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000225595.2	LINC01623	523924	9.15e-17	1.058	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000181126.13	HLA-V	-402400	3.34e-05	0.325875	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000233916.1	ZDHHC20P1	-319993	1.31e-11	0.826523	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000230598.1	OR2H4P	173318	3.97e-07	0.595056	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204713.10	TRIM27	464565	0.000171744	-0.176934	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000281831.1	HCP5B	-485229	1.75e-05	0.643671	3e-08
breast cancer	6_29509637	rs1233480	ENSG00000235821.1	IFITM4P	-241511	0.00017317	-0.456698	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000233916.1	ZDHHC20P1	-198910	2.96e-09	0.676402	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000230598.1	OR2H4P	294401	8.72e-07	0.534315	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000225595.2	LINC01623	645007	1.11e-14	0.916424	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000181126.13	HLA-V	-281317	2.64e-05	0.304945	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000204632.11	HLA-G	-317330	0.000261409	-0.403135	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000204713.10	TRIM27	585648	0.000142727	-0.165497	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000281831.1	HCP5B	-364146	3.64e-05	0.572746	5e-08
breast cancer	6_29693039	rs3116813	ENSG00000233916.1	ZDHHC20P1	-15508	1.85e-12	0.863234	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000225595.2	LINC01623	828409	3.19e-16	1.04827	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000181126.13	HLA-V	-97915	1.82e-05	0.33856	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204713.10	TRIM27	769050	3.06e-05	-0.197026	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000230598.1	OR2H4P	477803	6.95e-08	0.635124	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204632.11	HLA-G	-133928	0.000109642	-0.4645	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000281831.1	HCP5B	-180744	1.66e-05	0.649753	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000228078.1	HLA-U	-241062	4.25e-05	0.640196	6e-07
breast cancer	6_29785031	rs147680653	ENSG00000204713.10	TRIM27	861042	5.94e-05	-0.189598	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000225595.2	LINC01623	920401	4.17e-16	1.04244	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000233916.1	ZDHHC20P1	76484	1.17e-12	0.868508	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000181126.13	HLA-V	-5923	9.41e-06	0.348796	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000281831.1	HCP5B	-88752	2.06e-05	0.64133	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000204632.11	HLA-G	-41936	3.65e-05	-0.493746	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000228078.1	HLA-U	-149070	4.53e-05	0.636618	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000230598.1	OR2H4P	569795	2.81e-07	0.605121	1e-06
breast cancer	6_29882943	rs1611579	ENSG00000230598.1	OR2H4P	667707	1.99e-06	0.553417	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204713.10	TRIM27	958954	7.6e-06	-0.207333	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000237775.1	DDR1-DT	-992975	1.23e-05	0.553394	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000281831.1	HCP5B	9160	3.83e-06	0.683086	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000233916.1	ZDHHC20P1	174396	8.65e-11	0.78651	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000228078.1	HLA-U	-51158	2.05e-05	0.65367	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204632.11	HLA-G	55976	1.52e-05	-0.508614	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000234127.8	TRIM26	-330484	0.00016672	-0.178514	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000181126.13	HLA-V	91989	4.39e-06	0.355453	8e-07
breast cancer	6_30003183	rs3094146	ENSG00000233916.1	ZDHHC20P1	294636	8.65e-11	0.78651	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000230598.1	OR2H4P	787947	1.99e-06	0.553417	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000281831.1	HCP5B	129400	3.83e-06	0.683086	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204632.11	HLA-G	176216	1.52e-05	-0.508614	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000228078.1	HLA-U	69082	2.05e-05	0.65367	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000181126.13	HLA-V	212229	4.39e-06	0.355453	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000234127.8	TRIM26	-210244	0.00016672	-0.178514	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000237775.1	DDR1-DT	-872735	1.23e-05	0.553394	7e-07
breast cancer	6_30107326	rs2523992	ENSG00000237923.1	LINC02570	-740833	0.000120526	0.411354	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000233916.1	ZDHHC20P1	398779	8.03e-12	0.659107	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000261548.1	HLA-P	306911	0.000259924	0.3599	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000204657.3	OR2H2	519871	0.000100811	0.26675	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000181126.13	HLA-V	316372	2.01e-06	0.293386	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000230598.1	OR2H4P	892090	7.23e-05	0.37129	2e-07
breast cancer	6_30365728	rs3094054	ENSG00000234127.8	TRIM26	152301	3.23e-05	-0.201833	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000181126.13	HLA-V	574774	2.22e-06	0.375713	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000228078.1	HLA-U	431627	0.000110774	0.61099	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000233916.1	ZDHHC20P1	657181	4.68e-11	0.818217	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000237775.1	DDR1-DT	-510190	2.84e-07	0.662954	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000237923.1	LINC02570	-482431	0.000105138	0.533411	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204525.16	HLA-C	-906377	4.02e-05	0.402944	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000234745.10	HLA-B	-990714	1.78e-06	0.51575	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204632.11	HLA-G	538761	0.000103618	-0.470253	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000281831.1	HCP5B	491945	0.000121135	0.587116	1e-07
breast cancer	6_30374976	rs115707823	ENSG00000233916.1	ZDHHC20P1	666429	7.23e-09	0.663569	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000237923.1	LINC02570	-473183	8.72e-06	0.556633	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000237775.1	DDR1-DT	-500942	4.3e-07	0.597206	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000228078.1	HLA-U	440875	2.25e-05	0.610657	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000233916.1	ZDHHC20P1	666429	7.23e-09	0.663569	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000237923.1	LINC02570	-473183	8.72e-06	0.556633	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000237775.1	DDR1-DT	-500942	4.3e-07	0.597206	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000228078.1	HLA-U	440875	2.25e-05	0.610657	5e-07
breast cancer	6_30473526	rs3132615	ENSG00000204632.11	HLA-G	646559	0.000227074	-0.429739	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000234127.8	TRIM26	260099	8.41e-06	-0.207326	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000237923.1	LINC02570	-374633	6.53e-05	0.527231	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000181126.13	HLA-V	682572	3.85e-06	0.352742	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000233916.1	ZDHHC20P1	764979	2.84e-11	0.794314	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000234745.10	HLA-B	-882916	7.08e-07	0.513661	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000237775.1	DDR1-DT	-402392	2.09e-07	0.643825	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204525.16	HLA-C	-798579	6.02e-05	0.378561	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000270604.5	HCG17	219062	0.000279984	-0.538393	2e-06
breast cancer	6_30576624	rs3132610	ENSG00000204632.11	HLA-G	749657	2.09e-05	-0.50282	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000230174.1	LINC01149	-865043	0.00019886	0.20601	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000234745.10	HLA-B	-779818	1.67e-06	0.505841	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204536.13	CCHCR1	-581614	3.93e-05	-0.388231	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204516.9	MICB	-918257	0.000166926	0.386072	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204525.16	HLA-C	-695481	3.93e-05	0.39462	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000233916.1	ZDHHC20P1	868077	6.48e-10	0.754918	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000234127.8	TRIM26	363197	3.31e-06	-0.219989	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000237775.1	DDR1-DT	-299294	2.1e-07	0.655199	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000181126.13	HLA-V	785670	1.55e-07	0.405455	1e-06
breast cancer	6_30682249	rs9262142	ENSG00000233916.1	ZDHHC20P1	973702	5.8e-09	0.709982	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204632.11	HLA-G	855282	2.82e-05	-0.492088	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000181126.13	HLA-V	891295	5.73e-07	0.385033	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000234745.10	HLA-B	-674193	3.33e-07	0.53416	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000234127.8	TRIM26	468822	1e-05	-0.208084	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204516.9	MICB	-812632	9.4e-05	0.397758	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000240053.8	LY6G5B	-987918	1.46e-06	0.345945	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000237775.1	DDR1-DT	-193669	9.67e-08	0.668279	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204536.13	CCHCR1	-475989	6.54e-05	-0.375053	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204525.16	HLA-C	-589856	1.06e-05	0.419165	3e-06
breast cancer	6_30793795	rs3129984	ENSG00000234127.8	TRIM26	580368	1.03e-05	-0.20117	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204516.9	MICB	-701086	9.5e-05	0.384882	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000237775.1	DDR1-DT	-82123	1.99e-07	0.631792	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000230174.1	LINC01149	-647872	0.00013688	0.203114	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204632.11	HLA-G	966828	2.93e-05	-0.47551	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000240053.8	LY6G5B	-876372	4.91e-06	0.318363	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000234745.10	HLA-B	-562647	2.82e-06	0.476408	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204536.13	CCHCR1	-364443	6.94e-05	-0.361891	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204525.16	HLA-C	-478310	3.37e-05	0.382951	8e-06
breast cancer	6_31347004	rs115392158	ENSG00000248290.1	TNXA	-665468	8.08e-07	-0.483699	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000250535.1	STK19B	-666266	0.000165715	-0.396309	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000244731.7	C4A	-635020	1.36e-08	-0.453572	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000213719.8	CLIC1	-392759	6.81e-05	-0.195673	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204528.3	PSORS1C3	169105	0.000203951	-0.392177	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204338.8	CYP21A1P	-658685	8.9e-06	-0.391073	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000237775.1	DDR1-DT	471086	1.39e-05	0.37781	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000248290.1	TNXA	-665468	8.08e-07	-0.483699	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000250535.1	STK19B	-666266	0.000165715	-0.396309	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000244731.7	C4A	-635020	1.36e-08	-0.453572	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000213719.8	CLIC1	-392759	6.81e-05	-0.195673	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204528.3	PSORS1C3	169105	0.000203951	-0.392177	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204338.8	CYP21A1P	-658685	8.9e-06	-0.391073	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000237775.1	DDR1-DT	471086	1.39e-05	0.37781	3e-07
breast cancer	6_32699696	rs147527678	ENSG00000204257.14	HLA-DMA	-269398	2.86e-05	0.262156	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	1.8e-05	-0.425649	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000232629.8	HLA-DQB2	-63838	2.58e-08	0.566122	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000248290.1	TNXA	687224	1.11e-06	-0.488206	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000244731.7	C4A	717672	2.52e-08	-0.455294	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000204338.8	CYP21A1P	694007	4.48e-08	-0.487525	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000204257.14	HLA-DMA	-269398	2.86e-05	0.262156	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	1.8e-05	-0.425649	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000232629.8	HLA-DQB2	-63838	2.58e-08	0.566122	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000248290.1	TNXA	687224	1.11e-06	-0.488206	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000244731.7	C4A	717672	2.52e-08	-0.455294	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000204338.8	CYP21A1P	694007	4.48e-08	-0.487525	5e-07
breast cancer	6_33272092	rs17215231	ENSG00000231500.6	RPS18	44	2.82e-51	-1.0074	9e-13
breast cancer	6_43259403	rs111342015	ENSG00000112667.12	DNPH1	29919	4.93e-14	-0.5019	9e-08
breast cancer	6_43259403	rs111342015	ENSG00000124571.17	XPO5	-316672	6.03e-05	0.220492	9e-08
breast cancer	7_100437651	rs117911427	ENSG00000106290.14	TAF6	318084	0.000171608	-0.503033	7e-06
breast cancer	7_100437651	rs117911427	ENSG00000085514.15	PILRA	64206	1.4e-06	1.19777	7e-06
breast cancer	7_102478605	rs369574511	ENSG00000260097.2	SPDYE6	122161	7.75e-05	0.225723	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000005075.15	POLR2J	-302	4.58e-22	-0.41009	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000161036.12	LRWD1	13676	2.29e-31	0.25338	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000105808.17	RASA4	-138152	0.000149223	0.243034	2e-07
breast cancer	7_103022031	rs7458786	ENSG00000105821.14	DNAJC2	-322842	1.98e-07	0.231369	9e-06
breast cancer	7_103022031	rs7458786	ENSG00000161057.11	PSMC2	-322223	3.8e-05	0.185715	9e-06
breast cancer	7_144351809	rs62485509	ENSG00000204959.4	ARHGEF34P	64843	1.93e-07	-0.509804	4e-12
breast cancer	7_144351809	rs62485509	ENSG00000170356.8	OR2A20P	98852	7.59e-07	0.512303	4e-12
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	3.34e-06	0.398501	7e-11
breast cancer	7_144377836	rs720475	ENSG00000213214.4	ARHGEF35	189441	7.5e-05	0.343875	7e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	9.39e-08	-0.430947	7e-11
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	3.34e-06	0.398501	2e-11
breast cancer	7_144377836	rs720475	ENSG00000213214.4	ARHGEF35	189441	7.5e-05	0.343875	2e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	9.39e-08	-0.430947	2e-11
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	3.34e-06	0.398501	1e-08
breast cancer	7_144377836	rs720475	ENSG00000213214.4	ARHGEF35	189441	7.5e-05	0.343875	1e-08
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	9.39e-08	-0.430947	1e-08
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	3.34e-06	0.398501	4e-10
breast cancer	7_144377836	rs720475	ENSG00000213214.4	ARHGEF35	189441	7.5e-05	0.343875	4e-10
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	9.39e-08	-0.430947	4e-10
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	3.34e-06	0.398501	7e-12
breast cancer	7_144377836	rs720475	ENSG00000213214.4	ARHGEF35	189441	7.5e-05	0.343875	7e-12
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	9.39e-08	-0.430947	7e-12
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	3.34e-06	0.398501	1e-11
breast cancer	7_144377836	rs720475	ENSG00000213214.4	ARHGEF35	189441	7.5e-05	0.343875	1e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	9.39e-08	-0.430947	1e-11
breast cancer	7_27950149	rs739704	ENSG00000234336.6	JAZF1-AS1	-230173	5.95e-05	-0.263616	3e-14
breast cancer	7_38712494	rs7794030	ENSG00000006715.15	VPS41	-219900	3.95e-06	-0.134676	1e-06
breast cancer	7_38728314	rs1468348	ENSG00000006715.15	VPS41	-204080	2.01e-07	-0.148855	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000263001.5	GTF2I	38706	5.5e-18	0.405065	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000277053.4	GTF2IP1	-541323	3.43e-09	-0.575037	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000196275.13	GTF2IRD2	-155178	3.2e-19	0.882715	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000123965.13	PMS2P5	-197743	2.39e-13	0.934891	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000277072.4	STAG3L2	-194237	1.62e-05	0.322625	5e-06
breast cancer	7_92001306	rs6964587	ENSG00000240720.7	LRRD1	-163970	8.53e-06	-0.107665	9e-11
breast cancer	7_92001306	rs6964587	ENSG00000188693.7	CYP51A1-AS1	-133298	2.94e-09	-0.211046	9e-11
breast cancer	7_92001306	rs6964587	ENSG00000240720.7	LRRD1	-163970	8.53e-06	-0.107665	1e-06
breast cancer	7_92001306	rs6964587	ENSG00000188693.7	CYP51A1-AS1	-133298	2.94e-09	-0.211046	1e-06
breast cancer	7_92001306	rs6964587	ENSG00000240720.7	LRRD1	-163970	8.53e-06	-0.107665	3e-12
breast cancer	7_92001306	rs6964587	ENSG00000188693.7	CYP51A1-AS1	-133298	2.94e-09	-0.211046	3e-12
breast cancer	7_92001306	rs6964587	ENSG00000240720.7	LRRD1	-163970	8.53e-06	-0.107665	5e-07
breast cancer	7_92001306	rs6964587	ENSG00000188693.7	CYP51A1-AS1	-133298	2.94e-09	-0.211046	5e-07
breast cancer	7_94484487	rs17268829	ENSG00000127990.15	SGCE	-171722	2.51e-05	0.0761417	5e-13
breast cancer	7_94484487	rs17268829	ENSG00000127990.15	SGCE	-171722	2.51e-05	0.0761417	4e-15
breast cancer	7_94758031	rs10269006	ENSG00000127995.16	CASD1	248812	7.9e-05	-0.105392	5e-07
breast cancer	8_117869627	rs10103490	ENSG00000182197.10	EXT1	-242226	0.000114956	-0.136305	4e-06
breast cancer	8_123726378	rs970821	ENSG00000104537.16	ANXA13	-11029	4.48e-16	0.47634	2e-12
breast cancer	8_123745421	rs17350191	ENSG00000104537.16	ANXA13	8014	6.69e-08	0.364066	2e-11
breast cancer	8_123745421	rs17350191	ENSG00000104537.16	ANXA13	8014	6.69e-08	0.364066	2e-08
breast cancer	8_123745421	rs17350191	ENSG00000104537.16	ANXA13	8014	6.69e-08	0.364066	1e-10
breast cancer	8_17926905	rs11779988	ENSG00000104760.16	FGL1	16540	1.04e-05	0.166034	2e-06
breast cancer	8_17926905	rs11779988	ENSG00000078674.17	PCM1	4065	5.62e-05	0.0917934	2e-06
breast cancer	8_220692	rs66823261	ENSG00000172748.13	ZNF596	-11540	1.27e-05	0.15546	3e-07
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	6.68e-12	0.568232	3e-07
breast cancer	8_220692	rs66823261	ENSG00000180190.11	TDRP	-325089	1.02e-05	0.263172	3e-07
breast cancer	8_220692	rs66823261	ENSG00000172748.13	ZNF596	-11540	1.27e-05	0.15546	1e-08
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	6.68e-12	0.568232	1e-08
breast cancer	8_220692	rs66823261	ENSG00000180190.11	TDRP	-325089	1.02e-05	0.263172	1e-08
breast cancer	8_220692	rs66823261	ENSG00000172748.13	ZNF596	-11540	1.27e-05	0.15546	3e-08
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	6.68e-12	0.568232	3e-08
breast cancer	8_220692	rs66823261	ENSG00000180190.11	TDRP	-325089	1.02e-05	0.263172	3e-08
breast cancer	8_220692	rs66823261	ENSG00000172748.13	ZNF596	-11540	1.27e-05	0.15546	6e-09
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	6.68e-12	0.568232	6e-09
breast cancer	8_220692	rs66823261	ENSG00000180190.11	TDRP	-325089	1.02e-05	0.263172	6e-09
breast cancer	8_30372068	rs7834448	ENSG00000127589.4	TUBBP1	20195	5.14e-06	0.341471	7e-06
breast cancer	9_103912867	rs718857	ENSG00000270332.1	SMC2-DT	-180206	9.26e-11	-0.278246	2e-06
breast cancer	9_104094512	rs4742903	ENSG00000270332.1	SMC2-DT	1439	9.76e-16	-0.350944	2e-07
breast cancer	9_104094512	rs4742903	ENSG00000270332.1	SMC2-DT	1439	9.76e-16	-0.350944	3e-08
breast cancer	9_133463535	rs3124765	ENSG00000160325.14	CACFD1	3570	3.9e-05	-0.175625	2e-06
breast cancer	9_34723038	rs10814138	ENSG00000257198.6	FAM205BP	-115548	1.29e-08	0.179745	3e-06
breast cancer	9_83217469	rs13293114	ENSG00000229109.1	FRMD3-AS1	-1862	4.62e-05	0.337136	4e-06