DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
breast cancer	1_100414772	rs612683	ENSG00000079335.18	CDC14A	63038	5.67e-07	-0.175372	3e-07
breast cancer	1_10506158	rs616488	ENSG00000175279.21	CENPS	75375	4.18e-07	0.129222	2e-10
breast cancer	1_10506158	rs616488	ENSG00000175279.21	CENPS	75375	4.18e-07	0.129222	9e-09
breast cancer	1_10506158	rs616488	ENSG00000175279.21	CENPS	75375	4.18e-07	0.129222	1e-08
breast cancer	1_10506158	rs616488	ENSG00000175279.21	CENPS	75375	4.18e-07	0.129222	4e-18
breast cancer	1_10506158	rs616488	ENSG00000175279.21	CENPS	75375	4.18e-07	0.129222	5e-20
breast cancer	1_10506158	rs616488	ENSG00000175279.21	CENPS	75375	4.18e-07	0.129222	2e-23
breast cancer	1_10506158	rs616488	ENSG00000175279.21	CENPS	75375	4.18e-07	0.129222	4e-11
breast cancer	1_10535965	rs2506889	ENSG00000175279.21	CENPS	105182	1.67e-09	0.158606	2e-20
breast cancer	1_10535965	rs2506889	ENSG00000142655.12	PEX14	61078	0.000109191	-0.132246	2e-20
breast cancer	1_10536284	rs12375	ENSG00000142655.12	PEX14	61397	0.000136061	-0.130036	1e-05
breast cancer	1_10536284	rs12375	ENSG00000175279.21	CENPS	105501	3.76e-09	0.154765	1e-05
breast cancer	1_109637134	rs17024629	ENSG00000235045.2	RPL7P8	-14236	1.5e-06	-0.337488	3e-08
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	2.28e-09	0.216932	3e-08
breast cancer	1_109637134	rs17024629	ENSG00000235045.2	RPL7P8	-14236	1.5e-06	-0.337488	1e-06
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	2.28e-09	0.216932	1e-06
breast cancer	1_109637134	rs17024629	ENSG00000235045.2	RPL7P8	-14236	1.5e-06	-0.337488	1e-06
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	2.28e-09	0.216932	1e-06
breast cancer	1_113630788	rs1230666	ENSG00000116793.15	PHTF1	-128701	0.000218327	0.206136	4e-10
breast cancer	1_113903258	rs7513707	ENSG00000116793.15	PHTF1	143769	0.000135479	-0.175791	2e-11
breast cancer	1_113905767	rs11552449	ENSG00000116793.15	PHTF1	146278	8.1e-05	-0.183143	2e-08
breast cancer	1_113905767	rs11552449	ENSG00000116793.15	PHTF1	146278	8.1e-05	-0.183143	1e-09
breast cancer	1_113905767	rs11552449	ENSG00000116793.15	PHTF1	146278	8.1e-05	-0.183143	3e-09
breast cancer	1_113905767	rs11552449	ENSG00000116793.15	PHTF1	146278	8.1e-05	-0.183143	6e-07
breast cancer	1_113905767	rs11552449	ENSG00000116793.15	PHTF1	146278	8.1e-05	-0.183143	5e-11
breast cancer	1_119942712	rs6697258	ENSG00000270231.3	NBPF8	-493641	3.11e-05	0.469394	2e-15
breast cancer	1_119942712	rs6697258	ENSG00000270392.2	PFN1P2	-491340	1.5e-08	0.637709	2e-15
breast cancer	1_121121848	rs369304377	ENSG00000226067.6	LINC00623	169409	1.06e-08	0.267378	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000171943.11	SRGAP2C	-62962	1.67e-12	-0.245667	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000223345.3	H2BP1	4591	1.07e-23	0.44057	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000270392.2	PFN1P2	687796	1.97e-35	0.657369	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000273136.6	NBPF26	397925	3.03e-20	0.561676	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000270231.3	NBPF8	685495	3.06e-42	0.705455	2e-29
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	6.13e-09	0.265312	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.57e-19	0.536059	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.8e-12	-0.239688	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	9.24e-18	0.373005	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	6.13e-09	0.265312	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.57e-19	0.536059	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.8e-12	-0.239688	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	9.24e-18	0.373005	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	6.13e-09	0.265312	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.57e-19	0.536059	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.8e-12	-0.239688	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	9.24e-18	0.373005	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	6.13e-09	0.265312	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.57e-19	0.536059	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.8e-12	-0.239688	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	9.24e-18	0.373005	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	6.13e-09	0.265312	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.57e-19	0.536059	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.8e-12	-0.239688	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	9.24e-18	0.373005	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	6.13e-09	0.265312	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.57e-19	0.536059	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.8e-12	-0.239688	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	9.24e-18	0.373005	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	6.13e-09	0.265312	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.57e-19	0.536059	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.8e-12	-0.239688	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	9.24e-18	0.373005	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	6.13e-09	0.265312	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.57e-19	0.536059	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.8e-12	-0.239688	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	9.24e-18	0.373005	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	6.13e-09	0.265312	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	2.57e-19	0.536059	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.8e-12	-0.239688	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	9.24e-18	0.373005	3e-27
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	1.09e-37	0.546633	2e-07
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	1.09e-37	0.546633	6e-10
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	1.09e-37	0.546633	5e-09
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	1.09e-37	0.546633	8e-09
breast cancer	1_155016057	rs77548871	ENSG00000163354.14	DCST2	-17724	0.000250171	0.285835	5e-09
breast cancer	1_155176305	rs4971059	ENSG00000160752.14	FDPS	-132443	6.58e-06	0.131606	2e-10
breast cancer	1_155176305	rs4971059	ENSG00000160766.14	GBAP1	-51117	1.56e-10	-0.201428	2e-10
breast cancer	1_155176305	rs4971059	ENSG00000169231.13	THBS3	-31676	2.61e-07	0.134806	2e-10
breast cancer	1_155176305	rs4971059	ENSG00000160752.14	FDPS	-132443	6.58e-06	0.131606	5e-11
breast cancer	1_155176305	rs4971059	ENSG00000160766.14	GBAP1	-51117	1.56e-10	-0.201428	5e-11
breast cancer	1_155176305	rs4971059	ENSG00000169231.13	THBS3	-31676	2.61e-07	0.134806	5e-11
breast cancer	1_155212052	rs2974935	ENSG00000160752.14	FDPS	-96696	6.94e-08	0.147752	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000177628.15	GBA	-32647	2.51e-08	-0.135971	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000225855.6	RUSC1-AS1	-109635	5.64e-08	0.164111	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000169231.13	THBS3	4071	1.36e-24	0.243096	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000160766.14	GBAP1	-15370	1.34e-37	-0.358279	2e-07
breast cancer	1_155212373	rs2075570	ENSG00000160766.14	GBAP1	-15049	2.29e-38	-0.359726	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000160752.14	FDPS	-96375	8.5e-08	0.146064	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000169231.13	THBS3	4392	5.24e-25	0.243858	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000225855.6	RUSC1-AS1	-109314	3.97e-08	0.165131	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000177628.15	GBA	-32326	1.81e-08	-0.136637	5e-06
breast cancer	1_155216951	rs1057941	ENSG00000225855.6	RUSC1-AS1	-104736	0.000109536	0.117911	2e-07
breast cancer	1_155216951	rs1057941	ENSG00000169231.13	THBS3	8970	3.26e-09	0.145565	2e-07
breast cancer	1_155216951	rs1057941	ENSG00000160752.14	FDPS	-91797	2.11e-05	0.117314	2e-07
breast cancer	1_155216951	rs1057941	ENSG00000160766.14	GBAP1	-10471	8.17e-16	-0.236354	2e-07
breast cancer	1_155302483	rs7524950	ENSG00000177628.15	GBA	57784	1.11e-05	-0.117524	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000225855.6	RUSC1-AS1	-19204	2.35e-12	0.228663	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000143622.10	RIT1	-608921	1.45e-09	-0.237311	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000203761.5	MSTO2P	-443346	2.93e-12	-0.247329	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000160752.14	FDPS	-6265	9.31e-15	0.227806	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000143630.9	HCN3	24900	3.61e-06	-0.147317	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000132676.15	DAP3	-385477	7.41e-06	-0.104415	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000160766.14	GBAP1	75061	2.42e-14	-0.244366	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000169231.13	THBS3	94502	1.03e-09	0.163214	3e-09
breast cancer	1_155446537	rs10796944	ENSG00000143622.10	RIT1	-464867	1.46e-12	-0.295307	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000132676.15	DAP3	-241423	4.18e-05	-0.102371	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000160752.14	FDPS	137789	2.27e-12	0.222033	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000203761.5	MSTO2P	-299292	4.9e-18	-0.324165	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000160766.14	GBAP1	219115	5.11e-08	-0.189506	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000225855.6	RUSC1-AS1	124850	4.24e-10	0.219131	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000169231.13	THBS3	238556	0.000219983	0.106991	7e-10
breast cancer	1_155587180	rs12091730	ENSG00000160766.14	GBAP1	359758	1.33e-07	-0.184411	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000160752.14	FDPS	278432	6.21e-11	0.208386	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000225855.6	RUSC1-AS1	265493	1.01e-09	0.215327	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000143622.10	RIT1	-324224	2.13e-12	-0.294371	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000132676.15	DAP3	-100780	5.26e-05	-0.101454	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000169231.13	THBS3	379199	0.000158409	0.109782	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000203761.5	MSTO2P	-158649	3.74e-18	-0.32652	2e-10
breast cancer	1_155697170	rs348196	ENSG00000203761.5	MSTO2P	-48659	3.19e-18	-0.318808	2e-08
breast cancer	1_155697170	rs348196	ENSG00000160766.14	GBAP1	469748	7.99e-12	-0.230813	2e-08
breast cancer	1_155697170	rs348196	ENSG00000143622.10	RIT1	-214234	1.23e-13	-0.301865	2e-08
breast cancer	1_155697170	rs348196	ENSG00000169231.13	THBS3	489189	0.000252409	0.103695	2e-08
breast cancer	1_155697170	rs348196	ENSG00000225855.6	RUSC1-AS1	375483	2.57e-08	0.191922	2e-08
breast cancer	1_155697170	rs348196	ENSG00000160752.14	FDPS	388422	2.23e-10	0.19729	2e-08
breast cancer	1_156183252	rs11264454	ENSG00000196189.12	SEMA4A	35886	2.23e-60	0.463454	2e-08
breast cancer	1_156183252	rs11264454	ENSG00000163468.14	CCT3	-184621	6.36e-06	0.0827422	2e-08
breast cancer	1_156183252	rs11264454	ENSG00000196189.12	SEMA4A	35886	2.23e-60	0.463454	7e-07
breast cancer	1_156183252	rs11264454	ENSG00000163468.14	CCT3	-184621	6.36e-06	0.0827422	7e-07
breast cancer	1_16013277	rs1763604	ENSG00000186510.11	CLCNKA	-5598	1.28e-43	-0.415351	7e-09
breast cancer	1_16013277	rs1763604	ENSG00000173641.17	HSPB7	-6317	5.86e-70	-0.572119	7e-09
breast cancer	1_16013277	rs1763604	ENSG00000184908.17	CLCNKB	-30459	6.99e-16	0.315487	7e-09
breast cancer	1_16013277	rs1763604	ENSG00000185519.8	FAM131C	-60355	2.41e-06	0.185135	7e-09
breast cancer	1_168127440	rs60504827	ENSG00000143158.10	MPC2	190400	2.37e-10	-0.246357	2e-07
breast cancer	1_18480845	rs2992756	ENSG00000179023.8	KLHDC7A	-137	5.55e-36	0.260081	2e-15
breast cancer	1_18480845	rs2992756	ENSG00000179023.8	KLHDC7A	-137	5.55e-36	0.260081	5e-17
breast cancer	1_202209914	rs17489300	ENSG00000133067.17	LGR6	16013	1.02e-51	0.653155	2e-08
breast cancer	1_202209914	rs17489300	ENSG00000133067.17	LGR6	16013	1.02e-51	0.653155	9e-10
breast cancer	1_202218048	rs6678914	ENSG00000133067.17	LGR6	24147	2.44e-64	0.689609	1e-08
breast cancer	1_202218048	rs6678914	ENSG00000133067.17	LGR6	24147	2.44e-64	0.689609	3e-12
breast cancer	1_203832121	rs59867004	ENSG00000182004.12	SNRPE	-29482	8.04e-05	0.0825255	1e-10
breast cancer	1_204546897	rs2290854	ENSG00000170382.11	LRRN2	-138836	8.02e-07	0.182146	1e-07
breast cancer	1_204549714	rs4245739	ENSG00000170382.11	LRRN2	-136019	3.14e-06	0.180848	3e-23
breast cancer	1_204549714	rs4245739	ENSG00000170382.11	LRRN2	-136019	3.14e-06	0.180848	8e-18
breast cancer	1_204549714	rs4245739	ENSG00000170382.11	LRRN2	-136019	3.14e-06	0.180848	2e-12
breast cancer	1_204549714	rs4245739	ENSG00000170382.11	LRRN2	-136019	3.14e-06	0.180848	6e-15
breast cancer	1_204549714	rs4245739	ENSG00000170382.11	LRRN2	-136019	3.14e-06	0.180848	4e-06
breast cancer	1_207903511	rs2724379	ENSG00000284237.1	LINC02767	-55781	1.25e-11	-0.269196	2e-07
breast cancer	1_207903511	rs2724379	ENSG00000174059.16	CD34	-7891	0.000129991	0.13067	2e-07
breast cancer	1_40914768	rs4233486	ENSG00000049089.13	COL9A2	597474	2.98e-05	-0.134534	9e-09
breast cancer	1_40914768	rs4233486	ENSG00000049089.13	COL9A2	597474	2.98e-05	-0.134534	2e-08
breast cancer	1_45918469	rs12077974	ENSG00000234329.1	RPL7AP16	266643	1.39e-08	0.255822	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000159588.14	CCDC17	294412	5.22e-11	-0.186232	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000117450.13	PRDX1	395422	3.33e-09	-0.138476	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000197429.10	IPP	167819	7.1e-09	-0.198763	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000086015.20	MAST2	131482	1.96e-23	-0.290443	2e-07
breast cancer	1_46135245	rs1707302	ENSG00000159588.14	CCDC17	511188	7.17e-07	0.140781	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000171357.5	LURAP1	-68089	8.58e-05	-0.13706	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000197429.10	IPP	384595	0.000191133	0.12831	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000086015.20	MAST2	348258	1.01e-14	0.227833	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000234329.1	RPL7AP16	483419	3.19e-06	-0.209422	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000280670.2	CCDC163	635193	4.4e-06	-0.270885	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000232022.7	FAAHP1	-296884	7.32e-06	-0.140263	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000159588.14	CCDC17	511188	7.17e-07	0.140781	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000171357.5	LURAP1	-68089	8.58e-05	-0.13706	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000197429.10	IPP	384595	0.000191133	0.12831	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000086015.20	MAST2	348258	1.01e-14	0.227833	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000234329.1	RPL7AP16	483419	3.19e-06	-0.209422	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000280670.2	CCDC163	635193	4.4e-06	-0.270885	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000232022.7	FAAHP1	-296884	7.32e-06	-0.140263	3e-08
breast cancer	1_7857016	rs707475	ENSG00000049245.12	VAMP3	85747	4.23e-05	-0.0980519	1e-07
breast cancer	1_8035440	rs225132	ENSG00000116288.12	PARK7	81149	2.72e-05	0.0756745	3e-06
breast cancer	1_8326670	rs9628987; rs7535752	ENSG00000162426.14	SLC45A1	8844	1.87e-06	0.214684	5e-06
breast cancer	1_91555907	rs12134245	ENSG00000097046.12	CDC7	55014	1.98e-16	-0.251062	4e-06
breast cancer	10_102125800	rs10883710	ENSG00000269609.5	C10orf95-AS1	-324017	2.14e-06	0.0997563	3e-06
breast cancer	10_102125800	rs10883710	ENSG00000166275.15	BORCS7	-728423	4.87e-05	0.104208	3e-06
breast cancer	10_11806793	rs12358475	ENSG00000134463.14	ECHDC3	64427	2.15e-08	0.226686	2e-06
breast cancer	10_121865675	rs10510102	ENSG00000226864.2	ATE1-AS1	-62637	9.23e-07	0.285092	2e-06
breast cancer	10_121904429	rs7899628	ENSG00000226864.2	ATE1-AS1	-23883	1.43e-20	-0.430058	9e-10
breast cancer	10_122041907	rs2253762	ENSG00000226864.2	ATE1-AS1	113595	2.99e-05	0.219137	2e-09
breast cancer	10_27080233	rs7918232	ENSG00000107890.16	ANKRD26	-20265	9.55e-11	0.252489	8e-06
breast cancer	10_27080233	rs7918232	ENSG00000238021.6	ODAD2P1	-178529	7.81e-07	-0.334024	8e-06
breast cancer	10_27080233	rs7918232	ENSG00000120539.14	MASTL	-75034	1.47e-31	0.647519	8e-06
breast cancer	10_27080233	rs7918232	ENSG00000107897.18	ACBD5	-161897	5.57e-08	-0.164702	8e-06
breast cancer	10_5630056	rs4414128; rs2386661; rs17141741	ENSG00000196372.12	ASB13	-36539	4.9e-05	0.118255	5e-06
breast cancer	10_5752689	rs55910451	ENSG00000057608.16	GDI2	-89443	5.91e-18	-0.227584	4e-07
breast cancer	10_92172529	rs72807246	ENSG00000228701.1	TNKS2-DT	374238	3.62e-15	0.604974	3e-06
breast cancer	10_92172529	rs72807246	ENSG00000198060.9	MARCHF5	-118634	6.88e-07	-0.206501	3e-06
breast cancer	10_92172529	rs72807246	ENSG00000119938.8	PPP1R3C	539475	0.000213828	0.212028	3e-06
breast cancer	11_108486410	rs74911261	ENSG00000075239.13	ACAT1	364659	0.000286732	-0.310055	5e-11
breast cancer	11_108486410	rs74911261	ENSG00000075239.13	ACAT1	364659	0.000286732	-0.310055	2e-06
breast cancer	11_108486410	rs74911261	ENSG00000075239.13	ACAT1	364659	0.000286732	-0.310055	2e-06
breast cancer	11_111636465	rs505372	ENSG00000137720.7	C11orf1	-242470	4.83e-05	0.0906926	3e-06
breast cancer	11_111765903	rs643506	ENSG00000137713.15	PPP2R1B	-524	5.3e-39	-0.606766	2e-07
breast cancer	11_111765903	rs643506	ENSG00000230911.1	PPIHP1	-264464	3.34e-05	-0.252671	2e-07
breast cancer	11_117214494	rs77683187	ENSG00000160613.12	PCSK7	-18031	9.87e-14	0.30449	2e-06
breast cancer	11_120362917	rs7924772	ENSG00000181264.8	TLCD5	37788	3.85e-07	0.136352	4e-08
breast cancer	11_120362917	rs7924772	ENSG00000196914.8	ARHGEF12	26003	1.3e-10	0.114554	4e-08
breast cancer	11_129604878	rs7936804	ENSG00000043039.6	BARX2	228938	0.000123506	-0.210454	2e-06
breast cancer	11_18642694	rs10832963	ENSG00000179119.14	SPTY2D1	7903	6.21e-14	-0.182534	9e-06
breast cancer	11_1871355	rs4980389	ENSG00000226416.1	MRPL23-AS1	-118565	3.44e-09	0.257144	4e-07
breast cancer	11_1874478	rs4980386	ENSG00000226416.1	MRPL23-AS1	-115442	2.34e-09	0.258989	9e-17
breast cancer	11_1877434	rs1973765	ENSG00000226416.1	MRPL23-AS1	-112486	3.38e-09	0.25035	1e-37
breast cancer	11_1880867	rs4980383	ENSG00000226416.1	MRPL23-AS1	-109053	6.62e-09	-0.264406	3e-06
breast cancer	11_1880867	rs4980383	ENSG00000226416.1	MRPL23-AS1	-109053	6.62e-09	-0.264406	9e-09
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.1e-09	-0.288285	3e-09
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.1e-09	-0.288285	1e-10
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.1e-09	-0.288285	6e-21
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.1e-09	-0.288285	2e-11
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.1e-09	-0.288285	1e-18
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.1e-09	-0.288285	2e-13
breast cancer	11_1892909	rs576603	ENSG00000226416.1	MRPL23-AS1	-97011	4.83e-10	0.265831	2e-08
breast cancer	11_1920716	rs909116	ENSG00000226416.1	MRPL23-AS1	-69204	3.34e-08	0.247951	7e-07
breast cancer	11_1920716	rs909116	ENSG00000130595.17	TNNT3	1154	1.3e-05	-0.166598	7e-07
breast cancer	11_47325389	rs11039183	ENSG00000165915.13	SLC39A13	-81743	9.3e-05	-0.0820215	6e-06
breast cancer	11_47325389	rs11039183	ENSG00000025434.18	NR1H3	77089	2.67e-05	-0.162058	6e-06
breast cancer	11_62126500	rs7937840	ENSG00000149503.12	INCENP	2527	3.15e-36	-0.733014	2e-09
breast cancer	11_62126500	rs7937840	ENSG00000124939.5	SCGB2A1	-82168	2.69e-13	-0.392897	2e-09
breast cancer	11_62126500	rs7937840	ENSG00000149503.12	INCENP	2527	3.15e-36	-0.733014	1e-06
breast cancer	11_62126500	rs7937840	ENSG00000124939.5	SCGB2A1	-82168	2.69e-13	-0.392897	1e-06
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	7.69e-09	0.096403	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000173327.7	MAP3K11	201346	1.81e-06	0.150661	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000175376.8	EIF1AD	-186483	7.87e-06	-0.10309	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1.34e-18	0.330395	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	1.39e-13	-0.381825	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	7.69e-09	0.096403	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000173327.7	MAP3K11	201346	1.81e-06	0.150661	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000175376.8	EIF1AD	-186483	7.87e-06	-0.10309	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1.34e-18	0.330395	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	1.39e-13	-0.381825	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	7.69e-09	0.096403	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000173327.7	MAP3K11	201346	1.81e-06	0.150661	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000175376.8	EIF1AD	-186483	7.87e-06	-0.10309	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1.34e-18	0.330395	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	1.39e-13	-0.381825	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	7.69e-09	0.096403	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000173327.7	MAP3K11	201346	1.81e-06	0.150661	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000175376.8	EIF1AD	-186483	7.87e-06	-0.10309	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1.34e-18	0.330395	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	1.39e-13	-0.381825	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	7.69e-09	0.096403	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000173327.7	MAP3K11	201346	1.81e-06	0.150661	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000175376.8	EIF1AD	-186483	7.87e-06	-0.10309	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1.34e-18	0.330395	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	1.39e-13	-0.381825	2e-12
breast cancer	11_65935052	rs617791	ENSG00000254986.7	DPP3	-544961	0.000507056	-0.0733633	7e-06
breast cancer	11_65935052	rs617791	ENSG00000175334.7	BANF1	-67125	1.63e-18	0.146522	7e-06
breast cancer	11_65935052	rs617791	ENSG00000173327.7	MAP3K11	320803	7.78e-08	0.172657	7e-06
breast cancer	11_65935052	rs617791	ENSG00000172803.17	SNX32	101411	4.99e-11	-0.348327	7e-06
breast cancer	11_65935052	rs617791	ENSG00000175376.8	EIF1AD	-67026	2.5e-08	-0.130589	7e-06
breast cancer	11_65935052	rs617791	ENSG00000175513.9	TSGA10IP	-10393	8.37e-05	0.128994	7e-06
breast cancer	11_65935052	rs617791	ENSG00000172543.7	CTSW	55243	1.31e-08	0.222783	7e-06
breast cancer	11_65935052	rs617791	ENSG00000175550.7	DRAP1	15795	3.17e-05	0.0796826	7e-06
breast cancer	11_66301747	rs1783730	ENSG00000174684.6	B4GAT1	-45945	5.02e-05	0.0788882	3e-07
breast cancer	11_66301747	rs1783730	ENSG00000175115.11	PACS1	231293	0.000237017	0.110771	3e-07
breast cancer	11_66324772	rs118151305	ENSG00000172613.7	RAD9A	-993099	0.000178943	-0.222731	6e-09
breast cancer	11_66843174	rs7570	ENSG00000255468.6	B4GAT1-DT	495224	1.18e-11	0.342331	8e-06
breast cancer	11_66843174	rs7570	ENSG00000175115.11	PACS1	772720	0.000366564	-0.118726	8e-06
breast cancer	11_66843174	rs7570	ENSG00000174684.6	B4GAT1	495482	1e-07	-0.113866	8e-06
breast cancer	11_66843174	rs7570	ENSG00000173621.8	LRFN4	-13473	2.31e-11	-0.221919	8e-06
breast cancer	11_66843174	rs7570	ENSG00000174080.10	CTSF	274333	3.18e-13	0.18535	8e-06
breast cancer	11_66843174	rs7570	ENSG00000248746.5	ACTN3	296779	2.07e-09	0.334055	8e-06
breast cancer	11_68164294	rs4930561	ENSG00000255236.2	CHKA-DT	42241	6.48e-08	0.238219	3e-07
breast cancer	11_7379559	rs1023996	ENSG00000170743.16	SYT9	140781	2.03e-08	-0.21824	2e-06
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	1.56e-85	0.61369	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177697.17	CD151	-29867	1.57e-08	0.230678	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	1.43e-46	0.30847	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177225.16	GATD1	25529	2.07e-08	-0.129372	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177600.8	RPLP2	-6737	1.65e-13	0.12802	3e-12
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	1.56e-85	0.61369	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177697.17	CD151	-29867	1.57e-08	0.230678	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	1.43e-46	0.30847	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177225.16	GATD1	25529	2.07e-08	-0.129372	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177600.8	RPLP2	-6737	1.65e-13	0.12802	1e-12
breast cancer	12_111621753	rs11065979	ENSG00000111275.12	ALDH2	-145134	0.000516246	0.0928863	5e-06
breast cancer	12_120394343	rs206966	ENSG00000089154.10	GCN1	199633	2.68e-05	-0.132339	4e-08
breast cancer	12_120394343	rs206966	ENSG00000089154.10	GCN1	199633	2.68e-05	-0.132339	5e-08
breast cancer	12_14257551	rs17221259	ENSG00000139055.6	ERP27	-681531	1.69e-05	-0.264609	7e-06
breast cancer	12_14262448	rs150460514	ENSG00000139055.6	ERP27	-676634	7.28e-06	-0.277147	3e-08
breast cancer	12_49251457	rs11168936	ENSG00000139636.15	LMBR1L	140559	0.000264514	-0.0664179	9e-07
breast cancer	12_49251457	rs11168936	ENSG00000186897.4	C1QL4	-85731	6.98e-11	0.31584	9e-07
breast cancer	13_95222702	rs1926657	ENSG00000125257.13	ABCC4	-78744	8.48e-17	-0.511355	2e-06
breast cancer	13_95222702	rs1926657	ENSG00000223298.1	RNY3P8	-88253	0.000106876	-0.251742	2e-06
breast cancer	14_36658205	rs12885612	ENSG00000198807.12	PAX9	637	1.53e-18	0.603215	8e-09
breast cancer	14_36663564	rs2236007	ENSG00000198807.12	PAX9	5996	1.7e-17	0.582881	4e-21
breast cancer	14_36663564	rs2236007	ENSG00000198807.12	PAX9	5996	1.7e-17	0.582881	9e-13
breast cancer	14_36663564	rs2236007	ENSG00000198807.12	PAX9	5996	1.7e-17	0.582881	2e-09
breast cancer	14_36663564	rs2236007	ENSG00000198807.12	PAX9	5996	1.7e-17	0.582881	1e-25
breast cancer	14_36663564	rs2236007	ENSG00000198807.12	PAX9	5996	1.7e-17	0.582881	5e-10
breast cancer	14_36663564	rs2236007	ENSG00000198807.12	PAX9	5996	1.7e-17	0.582881	2e-13
breast cancer	14_36667340	rs7149262	ENSG00000198807.12	PAX9	9772	7.19e-18	0.593298	2e-21
breast cancer	15_49580388	rs8027730	ENSG00000138593.8	SECISBP2L	533825	0.000141577	-0.0878243	3e-08
breast cancer	15_49580388	rs8027730	ENSG00000166262.15	FAM227B	-40543	8.98e-11	0.19025	3e-08
breast cancer	15_50402109	rs4774565	ENSG00000104064.16	GABPB1	47151	2.03e-05	-0.119306	2e-06
breast cancer	15_50402109	rs4774565	ENSG00000244879.6	GABPB1-AS1	46700	1.46e-26	-0.537465	2e-06
breast cancer	15_51321455	rs1004983	ENSG00000186417.13	GLDN	-20174	8.43e-14	-0.284382	3e-06
breast cancer	15_74300521	rs12904134	ENSG00000198794.11	SCAMP5	-656944	3.8e-05	-0.17059	8e-06
breast cancer	15_74300521	rs12904134	ENSG00000178718.6	RPP25	-656697	0.000138105	-0.109126	8e-06
breast cancer	15_74300521	rs12904134	ENSG00000140474.12	ULK3	-542676	3.17e-05	-0.132656	8e-06
breast cancer	15_74843920	rs6938	ENSG00000140474.12	ULK3	723	3.26e-11	-0.210196	9e-08
breast cancer	15_74843920	rs6938	ENSG00000178718.6	RPP25	-113298	4.92e-06	-0.131278	9e-08
breast cancer	15_74843920	rs6938	ENSG00000103653.16	CSK	61863	9.26e-08	-0.126636	9e-08
breast cancer	15_74843920	rs6938	ENSG00000178802.17	MPI	-46085	3.48e-07	0.145683	9e-08
breast cancer	15_74854991	rs1869959	ENSG00000103653.16	CSK	72934	1.62e-06	-0.11308	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	1.41e-15	-0.248477	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000178718.6	RPP25	-102227	2.72e-05	-0.119766	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	2.09e-08	0.158471	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000103653.16	CSK	72934	1.62e-06	-0.11308	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	1.41e-15	-0.248477	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000178718.6	RPP25	-102227	2.72e-05	-0.119766	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	2.09e-08	0.158471	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000103653.16	CSK	72934	1.62e-06	-0.11308	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	1.41e-15	-0.248477	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000178718.6	RPP25	-102227	2.72e-05	-0.119766	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	2.09e-08	0.158471	4e-07
breast cancer	15_75516399	rs8027365	ENSG00000173548.8	SNX33	-132308	3.61e-08	0.16317	1e-07
breast cancer	15_75516399	rs8027365	ENSG00000169371.13	SNUPN	-110070	1.12e-15	0.2298	1e-07
breast cancer	15_75516399	rs8027365	ENSG00000140398.13	NEIL1	169237	2.57e-06	0.0990316	1e-07
breast cancer	15_75516399	rs8027365	ENSG00000140400.16	MAN2C1	148245	2.08e-111	0.69167	1e-07
breast cancer	15_75516399	rs8027365	ENSG00000169375.15	SIN3A	60557	1.05e-25	0.261164	1e-07
breast cancer	15_77977130	rs12906542	ENSG00000261143.1	ADAMTS7P3	1088	4.28e-06	0.260541	7e-07
breast cancer	15_77977130	rs12906542	ENSG00000167202.11	TBC1D2B	-100594	2.11e-13	-0.242429	7e-07
breast cancer	15_79777420	rs166870	ENSG00000136371.10	MTHFS	-119959	3.45e-11	-0.22499	3e-07
breast cancer	15_90965985	rs77554484	ENSG00000184508.10	HDDC3	33416	0.000110299	-0.155471	1e-15
breast cancer	15_90965985	rs77554484	ENSG00000166965.12	RCCD1	10189	5.8e-30	0.360914	1e-15
breast cancer	15_90965985	rs77554484	ENSG00000184056.14	VPS33B	-56618	0.000167186	-0.149535	1e-15
breast cancer	15_90965985	rs77554484	ENSG00000196547.14	MAN2A2	63767	9.75e-05	-0.107399	1e-15
breast cancer	15_90965985	rs77554484	ENSG00000258725.1	PRC1-AS1	-6875	1.66e-11	-0.458816	1e-15
breast cancer	15_90965985	rs77554484	ENSG00000198901.13	PRC1	-29644	1.49e-05	-0.205423	1e-15
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	3.6e-08	-0.323084	2e-19
breast cancer	15_90968837	rs2290203	ENSG00000196547.14	MAN2A2	66619	7.41e-06	-0.105253	2e-19
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	3.33e-12	0.196276	2e-19
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	3.6e-08	-0.323084	4e-08
breast cancer	15_90968837	rs2290203	ENSG00000196547.14	MAN2A2	66619	7.41e-06	-0.105253	4e-08
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	3.33e-12	0.196276	4e-08
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	3.6e-08	-0.323084	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000196547.14	MAN2A2	66619	7.41e-06	-0.105253	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	3.33e-12	0.196276	8e-10
breast cancer	16_56387075	rs2432539	ENSG00000167005.13	NUDT21	-65124	8.32e-06	0.100566	3e-10
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	5.96e-34	-0.436094	3e-10
breast cancer	16_56387075	rs2432539	ENSG00000167005.13	NUDT21	-65124	8.32e-06	0.100566	4e-08
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	5.96e-34	-0.436094	4e-08
breast cancer	16_56497273	rs2303282	ENSG00000159461.14	AMFR	71735	2.43e-06	-0.118225	3e-07
breast cancer	16_56497273	rs2303282	ENSG00000125124.11	BBS2	-23010	1.75e-45	-0.502624	3e-07
breast cancer	16_56497273	rs2303282	ENSG00000167005.13	NUDT21	45074	8.56e-05	0.0900644	3e-07
breast cancer	16_71475893	rs8050871	ENSG00000167377.17	ZNF23	12798	3.58e-45	-0.436486	3e-06
breast cancer	16_71475893	rs8050871	ENSG00000040199.18	PHLPP2	-248808	0.000416594	-0.127659	3e-06
breast cancer	17_2195889	rs16952006	ENSG00000167720.12	SRR	-107494	8.66e-14	-0.525475	3e-06
breast cancer	17_2195889	rs16952006	ENSG00000108963.17	DPH1	165779	1.74e-10	0.369728	3e-06
breast cancer	17_30560116	rs111780165	ENSG00000167549.18	CORO6	937209	0.000482702	-0.31212	8e-08
breast cancer	17_30560116	rs111780165	ENSG00000266733.5	TBC1D29P	3004	7.01e-07	-0.430091	8e-08
breast cancer	17_30689342	rs8081187	ENSG00000176390.11	CRLF3	-135434	1.52e-05	0.205944	2e-07
breast cancer	17_30884649	rs7223535	ENSG00000172171.10	TEFM	-22171	1.75e-05	0.181246	4e-10
breast cancer	17_30884649	rs7223535	ENSG00000176390.11	CRLF3	59873	2.44e-09	0.182873	4e-10
breast cancer	17_30884649	rs7223535	ENSG00000264538.6	SUZ12P1	175350	6.31e-05	0.148872	4e-10
breast cancer	17_30887862	rs113934718	ENSG00000176390.11	CRLF3	63086	7.71e-09	0.178668	1e-08
breast cancer	17_30887862	rs113934718	ENSG00000172171.10	TEFM	-18958	2.49e-05	0.179457	1e-08
breast cancer	17_30887862	rs113934718	ENSG00000264538.6	SUZ12P1	178563	3.45e-05	0.155288	1e-08
breast cancer	17_30894259	rs62070652	ENSG00000176390.11	CRLF3	69483	7.71e-09	0.178668	1e-06
breast cancer	17_30894259	rs62070652	ENSG00000264538.6	SUZ12P1	184960	3.45e-05	0.155288	1e-06
breast cancer	17_30894259	rs62070652	ENSG00000172171.10	TEFM	-12561	2.49e-05	0.179457	1e-06
breast cancer	17_30894259	rs62070652	ENSG00000176390.11	CRLF3	69483	7.71e-09	0.178668	6e-09
breast cancer	17_30894259	rs62070652	ENSG00000264538.6	SUZ12P1	184960	3.45e-05	0.155288	6e-09
breast cancer	17_30894259	rs62070652	ENSG00000172171.10	TEFM	-12561	2.49e-05	0.179457	6e-09
breast cancer	17_35565049	rs2840044	ENSG00000006125.17	AP2B1	-21850	1.09e-05	0.074261	8e-06
breast cancer	17_45394123	rs4763	ENSG00000214425.7	LRRC37A4P	-156212	1.44e-99	-1.20418	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214401.4	KANSL1-AS1	-799453	1.66e-71	1.03961	2e-08
breast cancer	17_45394123	rs4763	ENSG00000262500.1	MAPK8IP1P1	-849483	1.17e-64	1.03523	2e-08
breast cancer	17_45394123	rs4763	ENSG00000264070.1	DND1P1	-191748	3.52e-55	1.03138	2e-08
breast cancer	17_45394123	rs4763	ENSG00000176681.14	LRRC37A	-898610	5.08e-11	0.475372	2e-08
breast cancer	17_45394123	rs4763	ENSG00000204650.14	LINC02210	-226205	2.33e-91	0.931604	2e-08
breast cancer	17_45394123	rs4763	ENSG00000263503.1	MAPK8IP1P2	-208217	1.23e-65	1.10576	2e-08
breast cancer	17_45394123	rs4763	ENSG00000225190.10	PLEKHM1	-96626	1.86e-05	0.127699	2e-08
breast cancer	17_45394123	rs4763	ENSG00000181513.14	ACBD4	261523	6.92e-05	-0.106424	2e-08
breast cancer	17_45941122	rs62061734	ENSG00000186868.15	MAPT	46740	0.000104012	-0.178875	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000073969.18	NSF	-649547	0.000460491	-0.0978846	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000120088.14	CRHR1	156842	0.000117371	-0.185273	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000176681.14	LRRC37A	-351611	2.32e-14	0.511739	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000262500.1	MAPK8IP1P1	-302484	1.19e-89	1.08628	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000238083.7	LRRC37A2	-570389	3.76e-98	1.0457	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214401.4	KANSL1-AS1	-252454	2.1e-109	1.11891	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000232300.1	FAM215B	-621673	5.52e-27	0.690673	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000264070.1	DND1P1	355251	1.28e-82	1.11999	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000204650.14	LINC02210	320794	1.76e-134	0.975288	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000108379.9	WNT3	-891936	1.01e-36	0.626439	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000172992.11	DCAKD	880013	4.46e-05	0.168902	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000136448.11	NMT1	889460	1.21e-05	-0.131012	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000263503.1	MAPK8IP1P2	338782	1.89e-99	1.19322	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214425.7	LRRC37A4P	390787	6.25e-143	-1.24526	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000228696.8	ARL17B	-420675	7.03e-05	-0.289266	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000185829.17	ARL17A	-638560	2.08e-41	0.833958	8e-12
breast cancer	17_46751565	rs199533	ENSG00000120088.14	CRHR1	967285	0.000447586	-0.167364	5e-08
breast cancer	17_46751565	rs199533	ENSG00000185829.17	ARL17A	171883	4.25e-44	0.848203	5e-08
breast cancer	17_46751565	rs199533	ENSG00000262500.1	MAPK8IP1P1	507959	1.12e-104	1.13009	5e-08
breast cancer	17_46751565	rs199533	ENSG00000186868.15	MAPT	857183	7.53e-07	-0.224667	5e-08
breast cancer	17_46751565	rs199533	ENSG00000232300.1	FAM215B	188770	1.23e-25	0.667217	5e-08
breast cancer	17_46751565	rs199533	ENSG00000108379.9	WNT3	-81493	5.99e-49	0.701869	5e-08
breast cancer	17_46751565	rs199533	ENSG00000176681.14	LRRC37A	458832	1.46e-13	0.49149	5e-08
breast cancer	17_46751565	rs199533	ENSG00000238083.7	LRRC37A2	240054	2.16e-98	1.03597	5e-08
breast cancer	17_46751565	rs199533	ENSG00000214401.4	KANSL1-AS1	557989	1.87e-124	1.14951	5e-08
breast cancer	17_46788237	rs199498	ENSG00000176681.14	LRRC37A	495504	5.61e-13	0.46624	2e-08
breast cancer	17_46788237	rs199498	ENSG00000108379.9	WNT3	-44821	1.28e-52	0.702261	2e-08
breast cancer	17_46788237	rs199498	ENSG00000262500.1	MAPK8IP1P1	544631	3.35e-65	0.932017	2e-08
breast cancer	17_46788237	rs199498	ENSG00000186868.15	MAPT	893855	0.000377732	-0.157728	2e-08
breast cancer	17_46788237	rs199498	ENSG00000185829.17	ARL17A	208555	8.77e-33	0.722652	2e-08
breast cancer	17_46788237	rs199498	ENSG00000214401.4	KANSL1-AS1	594661	3.48e-72	0.936226	2e-08
breast cancer	17_46788237	rs199498	ENSG00000238083.7	LRRC37A2	276726	1.94e-64	0.867211	2e-08
breast cancer	17_46788237	rs199498	ENSG00000232300.1	FAM215B	225442	4.11e-18	0.546111	2e-08
breast cancer	17_50196930	rs2075555	ENSG00000108823.15	SGCA	30945	8.76e-05	-0.235992	8e-08
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	4.55e-12	-0.177393	2e-13
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	1.62e-22	-0.333903	2e-13
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	4.55e-12	-0.177393	1e-08
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	1.62e-22	-0.333903	1e-08
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	4.55e-12	-0.177393	5e-12
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	1.62e-22	-0.333903	5e-12
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	4.55e-12	-0.177393	8e-09
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	1.62e-22	-0.333903	8e-09
breast cancer	17_55132413	rs2787486	ENSG00000141198.14	TOM1L1	233026	1.5e-06	-0.117195	6e-29
breast cancer	17_55132413	rs2787486	ENSG00000166263.13	STXBP4	163627	1.24e-16	-0.269219	6e-29
breast cancer	17_55132413	rs2787486	ENSG00000141198.14	TOM1L1	233026	1.5e-06	-0.117195	2e-34
breast cancer	17_55132413	rs2787486	ENSG00000166263.13	STXBP4	163627	1.24e-16	-0.269219	2e-34
breast cancer	17_55135212	rs2628317	ENSG00000141198.14	TOM1L1	235825	1.37e-10	-0.168565	4e-16
breast cancer	17_55135212	rs2628317	ENSG00000166263.13	STXBP4	166426	6.71e-14	-0.266652	4e-16
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	6.17e-19	-0.314993	5e-07
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	6.17e-19	-0.314993	4e-10
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	6.17e-19	-0.314993	1e-09
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	6.17e-19	-0.314993	6e-06
breast cancer	17_81211408	rs9913021	ENSG00000167302.10	TEPSIN	-27683	3.94e-05	0.0815273	2e-06
breast cancer	17_81211408	rs9913021	ENSG00000141577.13	CEP131	-11591	3.35e-08	-0.12256	2e-06
breast cancer	17_82597601	rs62079673	ENSG00000141568.20	FOXK2	77888	0.000214638	-0.117254	1e-06
breast cancer	17_82597601	rs62079673	ENSG00000141580.15	WDR45B	-50952	2.02e-08	0.168683	1e-06
breast cancer	17_82946434	rs898097	ENSG00000141560.14	FN3KRP	229751	1.9e-12	-0.350807	2e-06
breast cancer	18_26757460	rs527616	ENSG00000134504.12	KCTD1	100059	4.17e-11	0.276461	7e-15
breast cancer	18_26757460	rs527616	ENSG00000260372.6	AQP4-AS1	101718	6.25e-11	0.344198	7e-15
breast cancer	18_26757460	rs527616	ENSG00000265369.3	PCAT18	67489	3.09e-21	0.558992	7e-15
breast cancer	18_26757460	rs527616	ENSG00000134504.12	KCTD1	100059	4.17e-11	0.276461	2e-10
breast cancer	18_26757460	rs527616	ENSG00000260372.6	AQP4-AS1	101718	6.25e-11	0.344198	2e-10
breast cancer	18_26757460	rs527616	ENSG00000265369.3	PCAT18	67489	3.09e-21	0.558992	2e-10
breast cancer	18_26757460	rs527616	ENSG00000134504.12	KCTD1	100059	4.17e-11	0.276461	8e-13
breast cancer	18_26757460	rs527616	ENSG00000260372.6	AQP4-AS1	101718	6.25e-11	0.344198	8e-13
breast cancer	18_26757460	rs527616	ENSG00000265369.3	PCAT18	67489	3.09e-21	0.558992	8e-13
breast cancer	18_26757460	rs527616	ENSG00000134504.12	KCTD1	100059	4.17e-11	0.276461	8e-16
breast cancer	18_26757460	rs527616	ENSG00000260372.6	AQP4-AS1	101718	6.25e-11	0.344198	8e-16
breast cancer	18_26757460	rs527616	ENSG00000265369.3	PCAT18	67489	3.09e-21	0.558992	8e-16
breast cancer	18_26757460	rs527616	ENSG00000134504.12	KCTD1	100059	4.17e-11	0.276461	1e-07
breast cancer	18_26757460	rs527616	ENSG00000260372.6	AQP4-AS1	101718	6.25e-11	0.344198	1e-07
breast cancer	18_26757460	rs527616	ENSG00000265369.3	PCAT18	67489	3.09e-21	0.558992	1e-07
breast cancer	18_26901308	rs17621185	ENSG00000171885.13	AQP4	35537	2.46e-05	-0.209125	3e-08
breast cancer	18_26901308	rs17621185	ENSG00000260372.6	AQP4-AS1	245566	3.46e-06	-0.304333	3e-08
breast cancer	18_26904324	rs3974648	ENSG00000171885.13	AQP4	38553	1.89e-06	-0.227934	5e-07
breast cancer	18_26904324	rs3974648	ENSG00000260372.6	AQP4-AS1	248582	1.65e-08	-0.3562	5e-07
breast cancer	18_26920652	rs232320	ENSG00000260372.6	AQP4-AS1	264910	4.85e-14	-0.399972	6e-09
breast cancer	18_26920652	rs232320	ENSG00000171885.13	AQP4	54881	1.42e-06	-0.196345	6e-09
breast cancer	18_26990703	rs1436904	ENSG00000260372.6	AQP4-AS1	334961	6.56e-05	-0.207027	3e-08
breast cancer	18_26990703	rs1436904	ENSG00000260372.6	AQP4-AS1	334961	6.56e-05	-0.207027	5e-06
breast cancer	18_26990703	rs1436904	ENSG00000260372.6	AQP4-AS1	334961	6.56e-05	-0.207027	3e-08
breast cancer	18_26990703	rs1436904	ENSG00000260372.6	AQP4-AS1	334961	6.56e-05	-0.207027	1e-14
breast cancer	18_26990703	rs1436904	ENSG00000260372.6	AQP4-AS1	334961	6.56e-05	-0.207027	8e-16
breast cancer	18_27025475	rs12458099	ENSG00000260372.6	AQP4-AS1	369733	3.18e-05	-0.211238	1e-12
breast cancer	19_11313027	rs322144	ENSG00000130158.13	DOCK6	50575	1.69e-05	0.0994973	7e-09
breast cancer	19_13047463	rs78269692	ENSG00000104903.4	LYL1	-55698	0.000193399	-0.198752	2e-09
breast cancer	19_17099805	rs7249698	ENSG00000160111.12	CPAMD8	72990	0.000102174	0.128531	4e-07
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	6.68e-06	0.172408	7e-21
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.55e-15	0.322015	7e-21
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	2.91e-05	0.116404	7e-21
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	5.64e-10	-0.18705	7e-21
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	6.68e-06	0.172408	1e-12
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.55e-15	0.322015	1e-12
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	2.91e-05	0.116404	1e-12
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	5.64e-10	-0.18705	1e-12
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	6.68e-06	0.172408	2e-06
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.55e-15	0.322015	2e-06
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	2.91e-05	0.116404	2e-06
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	5.64e-10	-0.18705	2e-06
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	6.68e-06	0.172408	9e-13
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.55e-15	0.322015	9e-13
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	2.91e-05	0.116404	9e-13
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	5.64e-10	-0.18705	9e-13
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	6.68e-06	0.172408	2e-09
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.55e-15	0.322015	2e-09
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	2.91e-05	0.116404	2e-09
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	5.64e-10	-0.18705	2e-09
breast cancer	19_17278895	rs8170	ENSG00000099330.8	OCEL1	52691	6.68e-06	0.172408	4e-13
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.55e-15	0.322015	4e-13
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	2.91e-05	0.116404	4e-13
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	5.64e-10	-0.18705	4e-13
breast cancer	19_17279482	rs4808075	ENSG00000141971.12	MVB12A	-139599	2.42e-05	0.127428	4e-07
breast cancer	19_17279482	rs4808075	ENSG00000141971.12	MVB12A	-139599	2.42e-05	0.127428	2e-09
breast cancer	19_17282085	rs8100241	ENSG00000130312.6	MRPL34	-10747	4.57e-05	0.0962435	4e-08
breast cancer	19_17283116	rs56069439	ENSG00000160117.14	ANKLE1	1471	0.000106131	0.138696	9e-09
breast cancer	19_17283116	rs56069439	ENSG00000141971.12	MVB12A	-135965	2.01e-05	0.129142	9e-09
breast cancer	19_17283116	rs56069439	ENSG00000160117.14	ANKLE1	1471	0.000106131	0.138696	8e-19
breast cancer	19_17283116	rs56069439	ENSG00000141971.12	MVB12A	-135965	2.01e-05	0.129142	8e-19
breast cancer	19_17283116	rs56069439	ENSG00000160117.14	ANKLE1	1471	0.000106131	0.138696	1e-32
breast cancer	19_17283116	rs56069439	ENSG00000141971.12	MVB12A	-135965	2.01e-05	0.129142	1e-32
breast cancer	19_17283315	rs2363956	ENSG00000130312.6	MRPL34	-9517	1.77e-05	0.100642	2e-06
breast cancer	19_17283315	rs2363956	ENSG00000130312.6	MRPL34	-9517	1.77e-05	0.100642	2e-08
breast cancer	19_17290595	rs67397200	ENSG00000160117.14	ANKLE1	8950	6.54e-05	0.141475	2e-08
breast cancer	19_17290595	rs67397200	ENSG00000141971.12	MVB12A	-128486	2.9e-05	0.125514	2e-08
breast cancer	19_17290595	rs67397200	ENSG00000160117.14	ANKLE1	8950	6.54e-05	0.141475	3e-17
breast cancer	19_17290595	rs67397200	ENSG00000141971.12	MVB12A	-128486	2.9e-05	0.125514	3e-17
breast cancer	19_17290595	rs67397200	ENSG00000160117.14	ANKLE1	8950	6.54e-05	0.141475	3e-37
breast cancer	19_17290595	rs67397200	ENSG00000141971.12	MVB12A	-128486	2.9e-05	0.125514	3e-37
breast cancer	19_18422832	rs7258465	ENSG00000130511.15	SSBP4	3968	2.44e-11	-0.15084	3e-28
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	2.83e-11	-0.150989	6e-14
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	2.83e-11	-0.150989	5e-28
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	2.83e-11	-0.150989	6e-06
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	2.83e-11	-0.150989	4e-15
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	2.83e-11	-0.150989	2e-31
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	2.83e-11	-0.150989	5e-15
breast cancer	19_18522945	rs172032	ENSG00000130511.15	SSBP4	104081	1.36e-05	-0.0945482	1e-16
breast cancer	19_19417997	rs1469713	ENSG00000089639.10	GMIP	-225670	0.000259578	-0.118434	1e-10
breast cancer	19_19417997	rs1469713	ENSG00000250067.11	YJEFN3	-111367	4.09e-09	-0.174264	1e-10
breast cancer	19_19417997	rs1469713	ENSG00000213996.12	TM6SF2	144606	3.85e-24	0.475181	1e-10
breast cancer	19_19417997	rs1469713	ENSG00000178093.13	TSSK6	-97688	5.82e-05	0.150747	1e-10
breast cancer	19_19417997	rs1469713	ENSG00000187664.8	HAPLN4	155201	1.76e-19	0.502034	1e-10
breast cancer	19_19434887	rs2965183	ENSG00000178093.13	TSSK6	-80798	0.000134659	0.14371	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000250067.11	YJEFN3	-94477	2.88e-09	-0.176447	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000089639.10	GMIP	-208780	0.000259597	-0.118792	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000213996.12	TM6SF2	161496	2.58e-24	0.47827	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000187664.8	HAPLN4	172091	1.49e-19	0.504478	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000178093.13	TSSK6	-80798	0.000134659	0.14371	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000250067.11	YJEFN3	-94477	2.88e-09	-0.176447	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000089639.10	GMIP	-208780	0.000259597	-0.118792	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000213996.12	TM6SF2	161496	2.58e-24	0.47827	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000187664.8	HAPLN4	172091	1.49e-19	0.504478	6e-12
breast cancer	19_19535463	rs2304098	ENSG00000089639.10	GMIP	-108204	0.000252897	-0.119293	2e-11
breast cancer	19_19535463	rs2304098	ENSG00000250067.11	YJEFN3	6099	3.51e-09	-0.175938	2e-11
breast cancer	19_19535463	rs2304098	ENSG00000187664.8	HAPLN4	272667	3.09e-20	0.514438	2e-11
breast cancer	19_19535463	rs2304098	ENSG00000213996.12	TM6SF2	262072	2.01e-24	0.480454	2e-11
breast cancer	19_19535463	rs2304098	ENSG00000178093.13	TSSK6	19778	0.000207381	0.140039	2e-11
breast cancer	19_29786822	rs113701136	ENSG00000105173.13	CCNE1	-25076	5.97e-07	-0.228518	2e-07
breast cancer	19_29786822	rs113701136	ENSG00000105173.13	CCNE1	-25076	5.97e-07	-0.228518	7e-09
breast cancer	19_43484866	rs66849333	ENSG00000176472.10	ZNF575	-40631	1.88e-07	-0.320191	1e-06
breast cancer	19_43779080	rs1685191	ENSG00000176222.8	ZNF404	-104971	3.06e-10	-0.203703	4e-20
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	5e-15	-0.252224	1e-16
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	5e-15	-0.252224	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	5e-15	-0.252224	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	5e-15	-0.252224	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	5e-15	-0.252224	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	5e-15	-0.252224	2e-14
breast cancer	19_43919418	rs375066	ENSG00000204920.10	ZNF155	-48444	0.000171483	-0.147828	2e-14
breast cancer	19_43919418	rs375066	ENSG00000176222.8	ZNF404	35367	2.98e-30	-0.353259	2e-14
breast cancer	19_51942133	rs8113308	ENSG00000161551.14	ZNF577	54157	3.16e-07	-0.135596	6e-07
breast cancer	19_51942133	rs8113308	ENSG00000269235.1	ZNF350-AS1	-7001	1.27e-17	0.554884	6e-07
breast cancer	2_171568284	rs11675683	ENSG00000071967.11	CYBRD1	46037	8.14e-12	0.174726	4e-08
breast cancer	2_201003582	rs112257290	ENSG00000155749.12	FLACC1	-353816	1.42e-05	0.442245	2e-07
breast cancer	2_201258707	rs3769821	ENSG00000064012.21	CASP8	25264	6.27e-05	-0.147678	4e-18
breast cancer	2_201258707	rs3769821	ENSG00000155749.12	FLACC1	-98691	2.04e-30	-0.504716	4e-18
breast cancer	2_201279205	rs10931936	ENSG00000155749.12	FLACC1	-78193	1.3e-31	-0.560834	6e-06
breast cancer	2_201279205	rs10931936	ENSG00000064012.21	CASP8	45762	1.71e-13	-0.291303	6e-06
breast cancer	2_201288355	rs1035142	ENSG00000155749.12	FLACC1	-69043	2.11e-45	-0.597328	3e-09
breast cancer	2_201288502	rs700635	ENSG00000155749.12	FLACC1	-68896	1.59e-32	-0.567859	5e-16
breast cancer	2_201288502	rs700635	ENSG00000064012.21	CASP8	55059	1.11e-13	-0.293297	5e-16
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	9.85e-14	-0.293939	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	2.93e-32	-0.565856	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	9.85e-14	-0.293939	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	2.93e-32	-0.565856	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	9.85e-14	-0.293939	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	2.93e-32	-0.565856	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000064012.21	CASP8	83081	9.85e-14	-0.293939	6e-24
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	2.93e-32	-0.565856	6e-24
breast cancer	2_201384985	rs2714486	ENSG00000155749.12	FLACC1	27587	1.18e-17	0.516697	7e-10
breast cancer	2_201384985	rs2714486	ENSG00000064012.21	CASP8	151542	2.31e-05	0.208139	7e-10
breast cancer	2_201502866	rs77688320	ENSG00000155749.12	FLACC1	145468	1.06e-13	0.48782	3e-09
breast cancer	2_201502866	rs77688320	ENSG00000064012.21	CASP8	269423	3.85e-06	0.24424	3e-09
breast cancer	2_201666541	rs62193398	ENSG00000155749.12	FLACC1	309143	2.96e-06	0.225786	1e-07
breast cancer	2_24906604	rs6725517	ENSG00000224165.5	DNAJC27-AS1	-64786	1.48e-05	-0.112058	5e-11
breast cancer	2_24906604	rs6725517	ENSG00000224165.5	DNAJC27-AS1	-64786	1.48e-05	-0.112058	3e-12
breast cancer	2_25068670	rs1971136	ENSG00000224165.5	DNAJC27-AS1	97280	1.14e-06	0.122381	5e-09
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	2.28e-12	0.292381	5e-09
breast cancer	2_28896719	rs67073037	ENSG00000189350.12	TOGARAM2	-59892	3.43e-07	-0.276742	5e-09
breast cancer	2_28896719	rs67073037	ENSG00000213639.9	PPP1CB	145079	6.81e-13	-0.218444	5e-09
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	2.28e-12	0.292381	3e-06
breast cancer	2_28896719	rs67073037	ENSG00000189350.12	TOGARAM2	-59892	3.43e-07	-0.276742	3e-06
breast cancer	2_28896719	rs67073037	ENSG00000213639.9	PPP1CB	145079	6.81e-13	-0.218444	3e-06
breast cancer	2_28897867	rs4577244	ENSG00000189350.12	TOGARAM2	-58744	2.54e-07	-0.280022	2e-09
breast cancer	2_28897867	rs4577244	ENSG00000171103.10	TRMT61B	27566	1.75e-12	0.294124	2e-09
breast cancer	2_28897867	rs4577244	ENSG00000213639.9	PPP1CB	146227	1.07e-12	-0.216855	2e-09
breast cancer	2_69945455	rs6756513	ENSG00000087338.4	GMCL1	115813	0.000183724	-0.124954	4e-07
breast cancer	2_9995553	rs113577745	ENSG00000134317.17	GRHL1	43860	5.38e-05	-0.245504	4e-10
breast cancer	2_9995553	rs113577745	ENSG00000134317.17	GRHL1	43860	5.38e-05	-0.245504	5e-10
breast cancer	20_34000289	rs2284378	ENSG00000101460.12	MAP1LC3A	-546565	2.66e-12	0.202529	1e-08
breast cancer	20_34000289	rs2284378	ENSG00000078747.14	ITCH	-362946	0.000105356	0.089988	1e-08
breast cancer	20_34002002	rs2300206	ENSG00000101460.12	MAP1LC3A	-544852	1.79e-12	0.204022	2e-08
breast cancer	20_34002002	rs2300206	ENSG00000078747.14	ITCH	-361233	0.000100443	0.0902366	2e-08
breast cancer	20_34002002	rs2300206	ENSG00000101460.12	MAP1LC3A	-544852	1.79e-12	0.204022	6e-06
breast cancer	20_34002002	rs2300206	ENSG00000078747.14	ITCH	-361233	0.000100443	0.0902366	6e-06
breast cancer	20_34131991	rs11907546	ENSG00000078747.14	ITCH	-231244	3.07e-05	0.094148	3e-06
breast cancer	20_34131991	rs11907546	ENSG00000101460.12	MAP1LC3A	-414863	8.22e-13	0.201727	3e-06
breast cancer	20_34131991	rs11907546	ENSG00000078747.14	ITCH	-231244	3.07e-05	0.094148	3e-09
breast cancer	20_34131991	rs11907546	ENSG00000101460.12	MAP1LC3A	-414863	8.22e-13	0.201727	3e-09
breast cancer	20_39051206	rs742276	ENSG00000101447.14	FAM83D	124894	0.000188597	-0.169217	9e-06
breast cancer	20_39051206	rs742276	ENSG00000101452.14	DHX35	88907	2.22e-07	-0.154368	9e-06
breast cancer	20_64247978	rs6062356	ENSG00000196132.11	MYT1	96187	1.36e-07	-0.239339	3e-06
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	2.59e-23	-1.03696	6e-09
breast cancer	21_46360308	rs9808759	ENSG00000160298.17		36433	1.22e-05	0.192666	6e-09
breast cancer	21_46360308	rs9808759	ENSG00000160285.14		131484	3.7e-07	0.39019	6e-09
breast cancer	21_46360308	rs9808759	ENSG00000160284.14	SPATC1L	175832	5.5e-05	-0.400756	6e-09
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	2.59e-23	-1.03696	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000160298.17	C21orf58	36433	1.22e-05	0.192666	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000160285.14	LSS	131484	3.7e-07	0.39019	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000160284.14	SPATC1L	175832	5.5e-05	-0.400756	4e-07
breast cancer	22_30027471	rs12537	ENSG00000100330.15	MTMR3	144316	0.000228204	-0.128383	9e-07
breast cancer	22_30027471	rs12537	ENSG00000184076.13	UQCR10	260102	0.000239177	-0.0622808	9e-07
breast cancer	22_30027471	rs12537	ENSG00000184117.11	NIPSNAP1	446134	0.000126945	-0.0739075	9e-07
breast cancer	22_38172826	rs738321	ENSG00000184381.18	PLA2G6	-32864	4.12e-09	0.14874	1e-13
breast cancer	22_38172826	rs738321	ENSG00000198792.12	TMEM184B	-100208	4.15e-18	-0.250156	1e-13
breast cancer	22_38172826	rs738321	ENSG00000184381.18	PLA2G6	-32864	4.12e-09	0.14874	7e-14
breast cancer	22_38172826	rs738321	ENSG00000198792.12	TMEM184B	-100208	4.15e-18	-0.250156	7e-14
breast cancer	22_38174306	rs4820318	ENSG00000198792.12	TMEM184B	-98728	4.69e-17	-0.241998	1e-13
breast cancer	22_38174306	rs4820318	ENSG00000184381.18	PLA2G6	-31384	1.32e-08	0.143568	1e-13
breast cancer	22_38962032	rs12628403	ENSG00000183741.11	CBX6	89718	6.16e-05	-0.16025	4e-06
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	2.8e-34	-0.884079	4e-06
breast cancer	22_38962032	rs12628403	ENSG00000244509.3	APOBEC3C	-52051	9.18e-08	-0.252777	4e-06
breast cancer	22_38962032	rs12628403	ENSG00000128383.12	APOBEC3A	9291	3.2e-31	-0.85533	4e-06
breast cancer	22_38962032	rs12628403	ENSG00000183741.11	CBX6	89718	6.16e-05	-0.16025	9e-14
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	2.8e-34	-0.884079	9e-14
breast cancer	22_38962032	rs12628403	ENSG00000244509.3	APOBEC3C	-52051	9.18e-08	-0.252777	9e-14
breast cancer	22_38962032	rs12628403	ENSG00000128383.12	APOBEC3A	9291	3.2e-31	-0.85533	9e-14
breast cancer	22_38962032	rs12628403	ENSG00000183741.11	CBX6	89718	6.16e-05	-0.16025	3e-17
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	2.8e-34	-0.884079	3e-17
breast cancer	22_38962032	rs12628403	ENSG00000244509.3	APOBEC3C	-52051	9.18e-08	-0.252777	3e-17
breast cancer	22_38962032	rs12628403	ENSG00000128383.12	APOBEC3A	9291	3.2e-31	-0.85533	3e-17
breast cancer	22_40480230	rs6001930	ENSG00000196588.14	MRTFA	-156472	5.13e-07	0.256778	2e-06
breast cancer	22_40480230	rs6001930	ENSG00000196236.12	XPNPEP3	-376867	0.000297581	-0.18213	2e-06
breast cancer	22_40480230	rs6001930	ENSG00000196588.14	MRTFA	-156472	5.13e-07	0.256778	2e-06
breast cancer	22_40480230	rs6001930	ENSG00000196236.12	XPNPEP3	-376867	0.000297581	-0.18213	2e-06
breast cancer	22_40480230	rs6001930	ENSG00000196588.14	MRTFA	-156472	5.13e-07	0.256778	4e-14
breast cancer	22_40480230	rs6001930	ENSG00000196236.12	XPNPEP3	-376867	0.000297581	-0.18213	4e-14
breast cancer	22_40480230	rs6001930	ENSG00000196588.14	MRTFA	-156472	5.13e-07	0.256778	2e-20
breast cancer	22_40480230	rs6001930	ENSG00000196236.12	XPNPEP3	-376867	0.000297581	-0.18213	2e-20
breast cancer	22_40480230	rs6001930	ENSG00000196588.14	MRTFA	-156472	5.13e-07	0.256778	5e-34
breast cancer	22_40480230	rs6001930	ENSG00000196236.12	XPNPEP3	-376867	0.000297581	-0.18213	5e-34
breast cancer	22_40480230	rs6001930	ENSG00000196588.14	MRTFA	-156472	5.13e-07	0.256778	2e-11
breast cancer	22_40480230	rs6001930	ENSG00000196236.12	XPNPEP3	-376867	0.000297581	-0.18213	2e-11
breast cancer	22_40480230	rs6001930	ENSG00000196588.14	MRTFA	-156472	5.13e-07	0.256778	4e-34
breast cancer	22_40480230	rs6001930	ENSG00000196236.12	XPNPEP3	-376867	0.000297581	-0.18213	4e-34
breast cancer	22_40480230	rs6001930	ENSG00000196588.14	MRTFA	-156472	5.13e-07	0.256778	9e-19
breast cancer	22_40480230	rs6001930	ENSG00000196236.12	XPNPEP3	-376867	0.000297581	-0.18213	9e-19
breast cancer	22_40481631	rs6001932	ENSG00000196588.14	MRTFA	-155071	1.33e-06	0.243084	7e-09
breast cancer	22_40600363	rs17002034	ENSG00000196236.12	XPNPEP3	-256734	9.31e-05	-0.204571	6e-11
breast cancer	22_40600363	rs17002034	ENSG00000196588.14	MRTFA	-36339	3.32e-07	0.271545	6e-11
breast cancer	22_40619879	rs5995881	ENSG00000196236.12	XPNPEP3	-237218	5.96e-05	-0.202739	4e-16
breast cancer	22_40619879	rs5995881	ENSG00000196588.14	MRTFA	-16823	4.56e-06	0.23598	4e-16
breast cancer	22_40623944	rs6001982	ENSG00000196236.12	XPNPEP3	-233153	2.06e-05	-0.215959	1e-34
breast cancer	22_40623944	rs6001982	ENSG00000196588.14	MRTFA	-12758	1.45e-06	0.249072	1e-34
breast cancer	22_40868537	rs62237039	ENSG00000196236.12	XPNPEP3	11440	7.49e-06	-0.419648	5e-09
breast cancer	22_41061455	rs141447235	ENSG00000235513.1	L3MBTL2-AS1	-156172	5.71e-05	-0.320225	2e-09
breast cancer	22_41061455	rs141447235	ENSG00000196236.12	XPNPEP3	204358	8.9e-08	-0.374557	2e-09
breast cancer	22_41323244	rs73176670	ENSG00000235513.1	L3MBTL2-AS1	105617	6.91e-06	-0.348412	1e-08
breast cancer	22_41323244	rs73176670	ENSG00000184983.9	NDUFA6	-767686	0.000342059	-0.202214	1e-08
breast cancer	22_41323244	rs73176670	ENSG00000196236.12	XPNPEP3	466147	2.45e-06	-0.323084	1e-08
breast cancer	22_41642782	rs73161324	ENSG00000235513.1	L3MBTL2-AS1	425155	4.34e-05	-0.332422	2e-09
breast cancer	22_41815785	rs8137282	ENSG00000196236.12	XPNPEP3	958688	7.39e-05	-0.344517	2e-07
breast cancer	22_41815785	rs8137282	ENSG00000235513.1	L3MBTL2-AS1	598158	0.000168461	-0.369557	2e-07
breast cancer	22_42745087	rs4820477	ENSG00000128274.15	A4GALT	23789	2.9e-10	-0.148844	9e-07
breast cancer	3_141547651	rs6776003	ENSG00000177311.11	ZBTB38	223438	8.25e-06	0.106125	3e-10
breast cancer	3_14520620	rs1106333	ENSG00000144596.12	GRIP2	-35455	6.35e-07	0.248701	6e-08
breast cancer	3_150750021	rs6788895	ENSG00000181788.3	SIAH2	-13456	1.07e-08	0.392311	9e-08
breast cancer	3_150750021	rs6788895	ENSG00000181788.3	SIAH2	-13456	1.07e-08	0.392311	2e-06
breast cancer	3_150754603	rs2120596	ENSG00000181788.3	SIAH2	-8874	9.45e-08	0.482921	8e-14
breast cancer	3_150755819	rs60538652	ENSG00000181788.3	SIAH2	-7658	2.72e-07	0.445946	6e-07
breast cancer	3_150762029	rs1838337	ENSG00000181788.3	SIAH2	-1448	9.72e-07	0.385463	1e-08
breast cancer	3_156645453	rs2136690	ENSG00000197980.12	LEKR1	-180028	1.15e-12	0.297062	4e-06
breast cancer	3_156645453	rs2136690	ENSG00000240875.5	LINC00886	-171609	7.82e-07	-0.16898	4e-06
breast cancer	3_156927968	rs7637701	ENSG00000174912.7	METTL15P1	213040	8.35e-10	-0.305333	1e-06
breast cancer	3_156927968	rs7637701	ENSG00000197980.12	LEKR1	102487	1.73e-12	0.296733	1e-06
breast cancer	3_156927968	rs7637701	ENSG00000240875.5	LINC00886	110906	2e-24	-0.337828	1e-06
breast cancer	3_27468223	rs7619833	ENSG00000033867.16	SLC4A7	-16197	0.000114791	-0.0896109	3e-45
breast cancer	3_46825376	rs6796502	ENSG00000181585.3	TMIE	124043	4.14e-05	0.263374	7e-16
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	1.84e-16	0.593938	7e-16
breast cancer	3_46825376	rs6796502	ENSG00000226074.4	PRSS44P	12818	0.000126619	0.234261	7e-16
breast cancer	3_46825376	rs6796502	ENSG00000261603.1	PRSS46P	88947	1.42e-06	0.302927	7e-16
breast cancer	3_46825376	rs6796502	ENSG00000181585.3	TMIE	124043	4.14e-05	0.263374	6e-15
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	1.84e-16	0.593938	6e-15
breast cancer	3_46825376	rs6796502	ENSG00000226074.4	PRSS44P	12818	0.000126619	0.234261	6e-15
breast cancer	3_46825376	rs6796502	ENSG00000261603.1	PRSS46P	88947	1.42e-06	0.302927	6e-15
breast cancer	3_46825376	rs6796502	ENSG00000181585.3	TMIE	124043	4.14e-05	0.263374	8e-07
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	1.84e-16	0.593938	8e-07
breast cancer	3_46825376	rs6796502	ENSG00000226074.4	PRSS44P	12818	0.000126619	0.234261	8e-07
breast cancer	3_46825376	rs6796502	ENSG00000261603.1	PRSS46P	88947	1.42e-06	0.302927	8e-07
breast cancer	3_46825376	rs6796502	ENSG00000181585.3	TMIE	124043	4.14e-05	0.263374	2e-08
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	1.84e-16	0.593938	2e-08
breast cancer	3_46825376	rs6796502	ENSG00000226074.4	PRSS44P	12818	0.000126619	0.234261	2e-08
breast cancer	3_46825376	rs6796502	ENSG00000261603.1	PRSS46P	88947	1.42e-06	0.302927	2e-08
breast cancer	3_46846708	rs56387622	ENSG00000178055.11	PRSS42P	12613	1.33e-05	0.268517	5e-19
breast cancer	3_46846708	rs56387622	ENSG00000261603.1	PRSS46P	110279	1.17e-07	0.321551	5e-19
breast cancer	3_46846708	rs56387622	ENSG00000188086.13	PRSS45P	101953	1.17e-12	0.500854	5e-19
breast cancer	3_46846708	rs56387622	ENSG00000226074.4	PRSS44P	34150	0.000141865	0.225212	5e-19
breast cancer	3_47364189	rs146331761	ENSG00000229759.1	MRPS18AP1	-892397	0.000217654	0.576191	5e-07
breast cancer	3_49129027	rs61729152	ENSG00000229759.1	MRPS18AP1	872441	0.00055347	0.775425	6e-06
breast cancer	3_49129027	rs61729152	ENSG00000233276.3	GPX1	-229573	0.000779188	-0.289218	6e-06
breast cancer	3_49129027	rs61729152	ENSG00000010256.10	UQCRC1	518051	1.8e-06	-0.288135	6e-06
breast cancer	3_63982224	rs1053338	ENSG00000163636.10	PSMD6	-41786	3.45e-05	-0.0990361	5e-11
breast cancer	3_63982224	rs1053338	ENSG00000163636.10	PSMD6	-41786	3.45e-05	-0.0990361	7e-10
breast cancer	3_63982224	rs1053338	ENSG00000163636.10	PSMD6	-41786	3.45e-05	-0.0990361	2e-07
breast cancer	3_63982224	rs1053338	ENSG00000163636.10	PSMD6	-41786	3.45e-05	-0.0990361	9e-09
breast cancer	3_64074452	rs1450985	ENSG00000239653.1	PSMD6-AS2	70430	9.73e-07	0.136991	6e-08
breast cancer	3_64074452	rs1450985	ENSG00000189196.4	LINC00994	-12911	4.82e-05	-0.195525	6e-08
breast cancer	4_103450498	rs10016947	ENSG00000164039.14	BDH2	350615	4.51e-05	0.268707	9e-06
breast cancer	4_105435604	rs77928427	ENSG00000138777.19	PPA2	-38477	4.76e-06	-0.114149	3e-08
breast cancer	4_121185138	rs17051310; rs13116936	ENSG00000173376.13	NDNF	112117	2.01e-09	-0.570314	2e-06
breast cancer	4_121215608	rs4455437; rs921551	ENSG00000173376.13	NDNF	142587	6.49e-07	0.211222	2e-06
breast cancer	4_1985245	rs495367	ENSG00000185049.14	NELFA	-56658	3.76e-09	0.180655	2e-08
breast cancer	5_10467590	rs1092913	ENSG00000145495.15	MARCHF6	113887	1.54e-08	-0.137803	2e-06
breast cancer	5_128098106	rs1112956	ENSG00000138829.11	FBN2	-561079	4.35e-09	0.357003	9e-06
breast cancer	5_128098106	rs1112956	ENSG00000245937.7	SLC12A2-DT	14934	9.81e-40	0.523805	9e-06
breast cancer	5_128227188	rs36715	ENSG00000245937.7	SLC12A2-DT	144016	2.36e-16	0.300524	4e-06
breast cancer	5_132304843	rs6860806	ENSG00000197375.12	SLC22A5	-64909	8e-16	-0.211493	3e-08
breast cancer	5_132304843	rs6860806	ENSG00000233006.6	MIR3936HG	-64805	9.13e-14	0.26075	3e-08
breast cancer	5_132304843	rs6860806	ENSG00000131435.12	PDLIM4	47172	1.52e-05	-0.101138	3e-08
breast cancer	5_132304843	rs6860806	ENSG00000072682.18	P4HA2	9528	5.89e-34	0.356824	3e-08
breast cancer	5_132304843	rs6860806	ENSG00000197375.12	SLC22A5	-64909	8e-16	-0.211493	8e-08
breast cancer	5_132304843	rs6860806	ENSG00000233006.6	MIR3936HG	-64805	9.13e-14	0.26075	8e-08
breast cancer	5_132304843	rs6860806	ENSG00000131435.12	PDLIM4	47172	1.52e-05	-0.101138	8e-08
breast cancer	5_132304843	rs6860806	ENSG00000072682.18	P4HA2	9528	5.89e-34	0.356824	8e-08
breast cancer	5_132466255	rs2522057	ENSG00000072682.18	P4HA2	170940	1.5e-33	-0.365708	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	6.35e-10	-0.224766	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	6.63e-05	-0.125974	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000197375.12	SLC22A5	96503	3.01e-11	0.181663	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000131435.12	PDLIM4	208584	5.51e-06	0.109374	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000072682.18	P4HA2	170940	1.5e-33	-0.365708	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	6.35e-10	-0.224766	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	6.63e-05	-0.125974	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000197375.12	SLC22A5	96503	3.01e-11	0.181663	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000131435.12	PDLIM4	208584	5.51e-06	0.109374	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000072682.18	P4HA2	170940	1.5e-33	-0.365708	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	6.35e-10	-0.224766	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	6.63e-05	-0.125974	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000197375.12	SLC22A5	96503	3.01e-11	0.181663	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000131435.12	PDLIM4	208584	5.51e-06	0.109374	9e-08
breast cancer	5_132497907	rs736801	ENSG00000233006.6	MIR3936HG	128259	4.37e-07	0.188982	8e-08
breast cancer	5_132497907	rs736801	ENSG00000131435.12	PDLIM4	240236	0.000103774	-0.0957745	8e-08
breast cancer	5_132497907	rs736801	ENSG00000197536.11	IRF1-AS1	87271	7.48e-05	0.127878	8e-08
breast cancer	5_132497907	rs736801	ENSG00000197375.12	SLC22A5	128155	3.23e-09	-0.166166	8e-08
breast cancer	5_132497907	rs736801	ENSG00000072682.18	P4HA2	202592	4.26e-28	0.344453	8e-08
breast cancer	5_133071366	rs6596100	ENSG00000170606.14	HSPA4	19404	4.6e-08	0.101582	2e-08
breast cancer	5_133071366	rs6596100	ENSG00000170606.14	HSPA4	19404	4.6e-08	0.101582	8e-09
breast cancer	5_1453229	rs2617583	ENSG00000142319.17	SLC6A3	7799	2.15e-22	-0.419022	9e-07
breast cancer	5_149053986	rs250677	ENSG00000169247.11	SH3TC2	-9177	5.28e-09	0.270875	8e-06
breast cancer	5_154976135	rs6890610	ENSG00000082516.8	GEMIN5	37926	8.91e-07	-0.165875	6e-06
breast cancer	5_154976135	rs6890610	ENSG00000155508.13	CNOT8	118582	4.58e-21	-0.281761	6e-06
breast cancer	5_50345811	rs72749841	ENSG00000170571.11	EMB	-97437	2.92e-05	0.19492	7e-10
breast cancer	5_50793817	rs26067	ENSG00000170571.11	EMB	350569	1.99e-12	-0.247187	2e-08
breast cancer	5_56711512	rs7709971	ENSG00000225940.5	C5orf67	105280	5.3e-05	-0.239507	6e-35
breast cancer	5_56715530	rs7714232	ENSG00000225940.5	C5orf67	109298	5.3e-05	-0.239507	6e-22
breast cancer	5_56727256	rs16886165	ENSG00000225940.5	C5orf67	121024	4.84e-06	-0.269752	5e-07
breast cancer	5_56727256	rs16886165	ENSG00000225940.5	C5orf67	121024	4.84e-06	-0.269752	1e-20
breast cancer	5_56733416	rs16886181	ENSG00000225940.5	C5orf67	127184	1.43e-05	-0.263097	9e-14
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	9.03e-11	0.33872	3e-36
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	9.03e-11	0.33872	1e-39
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	9.03e-11	0.33872	5e-09
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	9.03e-11	0.33872	7e-20
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	9.03e-11	0.33872	1e-08
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	9.03e-11	0.33872	3e-27
breast cancer	5_56737113	rs1862626	ENSG00000155542.11	SETD9	-172147	9.4e-11	0.337819	4e-12
breast cancer	5_56757708	rs62355901	ENSG00000225940.5	C5orf67	151476	4.59e-06	-0.285829	3e-98
breast cancer	5_56757896	rs62355902	ENSG00000225940.5	C5orf67	151664	6.54e-06	-0.28329	2e-86
breast cancer	5_56757896	rs62355902	ENSG00000225940.5	C5orf67	151664	6.54e-06	-0.28329	7e-98
breast cancer	5_56757896	rs62355902	ENSG00000225940.5	C5orf67	151664	6.54e-06	-0.28329	2e-06
breast cancer	5_56926293	rs11957276	ENSG00000225940.5	C5orf67	320061	1.51e-06	0.280454	5e-11
breast cancer	5_56926293	rs11957276	ENSG00000155542.11	SETD9	17033	2.42e-06	0.275261	5e-11
breast cancer	5_56977866	rs10036895	ENSG00000225940.5	C5orf67	371634	5.37e-08	0.267564	2e-12
breast cancer	5_56977866	rs10036895	ENSG00000155542.11	SETD9	68606	2.09e-29	0.528913	2e-12
breast cancer	5_56977866	rs10036895	ENSG00000095015.5	MAP3K1	162292	8.36e-05	0.10115	2e-12
breast cancer	5_81972251	rs111549985	ENSG00000205464.11	ATP6AP1L	-307211	7e-61	0.655198	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000152348.15	ATG10	226	5.88e-89	1.00878	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000186468.12	RPS23	-306326	3.23e-76	-0.504391	6e-12
breast cancer	5_82161539	rs2407064	ENSG00000152348.15	ATG10	189514	2.88e-83	-0.967158	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000205464.11	ATP6AP1L	-117923	4.15e-64	-0.655366	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000186468.12	RPS23	-117038	1.15e-80	0.504602	3e-08
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	8.67e-82	-0.9739	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.61e-81	0.513168	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	2.92e-65	-0.668574	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	8.67e-82	-0.9739	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.61e-81	0.513168	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	2.92e-65	-0.668574	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	8.67e-82	-0.9739	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.61e-81	0.513168	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	2.92e-65	-0.668574	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	8.67e-82	-0.9739	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.61e-81	0.513168	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	2.92e-65	-0.668574	4e-09
breast cancer	5_82340549	rs2407156	ENSG00000205464.11	ATP6AP1L	61087	3.48e-49	0.605798	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000152348.15	ATG10	368524	5.66e-47	0.797341	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000186468.12	RPS23	61972	6.88e-60	-0.464205	2e-06
breast cancer	6_122394099	rs74392007	ENSG00000025156.12	HSF2	-5447	2.22e-10	-0.272354	3e-07
breast cancer	6_122554525	rs76092474	ENSG00000025156.12	HSF2	154979	6.01e-09	-0.249539	3e-06
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	5.27e-64	-0.842337	8e-10
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	5.27e-64	-0.842337	2e-12
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	5.27e-64	-0.842337	3e-12
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	5.27e-64	-0.842337	4e-08
breast cancer	6_13713134	rs418053	ENSG00000124523.15	SIRT5	138605	1.11e-05	-0.152938	1e-13
breast cancer	6_13722291	rs204247	ENSG00000124523.15	SIRT5	147762	2.49e-06	-0.164131	8e-13
breast cancer	6_13722291	rs204247	ENSG00000124523.15	SIRT5	147762	2.49e-06	-0.164131	8e-09
breast cancer	6_13722291	rs204247	ENSG00000124523.15	SIRT5	147762	2.49e-06	-0.164131	3e-14
breast cancer	6_13722291	rs204247	ENSG00000124523.15	SIRT5	147762	2.49e-06	-0.164131	3e-07
breast cancer	6_13722291	rs204247	ENSG00000124523.15	SIRT5	147762	2.49e-06	-0.164131	4e-10
breast cancer	6_166308998	rs4075454	ENSG00000176381.5	PRR18	550	3.99e-05	-0.18336	5e-06
breast cancer	6_25710343	rs68006638	ENSG00000186470.13	BTN3A2	-654816	1.66e-29	-1.01666	2e-07
breast cancer	6_25874195	rs13198474	ENSG00000186470.13	BTN3A2	-490964	1.68e-29	-1.03024	2e-07
breast cancer	6_26175638	rs17598658	ENSG00000186470.13	BTN3A2	-189521	7.41e-47	-1.12262	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000204789.4	ZNF204P	-896875	0.000179225	0.162723	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000124613.8	ZNF391	-911269	3.91e-05	0.278703	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000186470.13	BTN3A2	98187	5.26e-61	-1.12754	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000112812.15	PRSS16	-784355	1.1e-07	0.238184	2e-09
breast cancer	6_26993501	rs34546498	ENSG00000124613.8	ZNF391	-381114	0.000119899	0.267069	9e-10
breast cancer	6_26993501	rs34546498	ENSG00000112812.15	PRSS16	-254200	6.46e-08	0.248083	9e-10
breast cancer	6_26993501	rs34546498	ENSG00000186470.13	BTN3A2	628342	1.58e-58	-1.13557	9e-10
breast cancer	6_26993501	rs34546498	ENSG00000204789.4	ZNF204P	-366720	0.000156183	0.168073	9e-10
breast cancer	6_27307055	rs56114371	ENSG00000137185.11	ZSCAN9	-917831	8.82e-08	0.293935	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000124613.8	ZNF391	-67560	9.14e-05	0.267322	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000197062.11	ZSCAN26	-959955	1.5e-11	-0.37913	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000112812.15	PRSS16	59354	4.32e-08	0.247338	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000219392.1	ZNF602P	-808573	3.95e-08	-0.620108	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000204789.4	ZNF204P	-53166	0.000752744	0.14765	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000182477.5	OR2B8P	-747110	1.99e-15	0.833944	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000226314.7	ZKSCAN8P1	-854726	1.46e-09	-0.46628	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000186470.13	BTN3A2	941896	8.81e-57	-1.10444	2e-09
breast cancer	6_27457865	rs34196306	ENSG00000220721.1	OR1F12P	-615451	0.000277759	0.416106	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000182477.5	OR2B8P	-596300	4.11e-18	0.943838	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000197279.3	ZNF165	-623266	0.000646999	-0.296059	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000219392.1	ZNF602P	-657763	6.38e-09	-0.681976	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000187987.9	ZSCAN23	-985637	0.000332778	0.276976	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000196812.4	ZSCAN16	-666695	0.000772734	0.242533	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000189298.13	ZKSCAN3	-892049	1.08e-06	-0.306876	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000226314.7	ZKSCAN8P1	-703916	2.82e-11	-0.532763	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000112812.15	PRSS16	210164	2.37e-05	0.200103	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000197062.11	ZSCAN26	-809145	1.76e-12	-0.412126	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000235109.7	ZSCAN31	-898406	4.35e-09	0.622889	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000124613.8	ZNF391	83250	0.000322321	0.256434	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000137185.11	ZSCAN9	-767021	1.89e-08	0.32149	1e-09
breast cancer	6_27873148	rs45509595	ENSG00000182477.5	OR2B8P	-181017	8.35e-19	0.946183	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000112812.15	PRSS16	625447	4.86e-06	0.212563	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000137185.11	ZSCAN9	-351738	1.91e-08	0.316132	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000197062.11	ZSCAN26	-393862	2.36e-13	-0.420371	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000187987.9	ZSCAN23	-570354	0.000246719	0.278242	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000226314.7	ZKSCAN8P1	-288633	1.14e-12	-0.558314	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000235109.7	ZSCAN31	-483123	1.1e-09	0.6353	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000219392.1	ZNF602P	-242480	9.1e-10	-0.706248	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000124613.8	ZNF391	498533	0.000152926	0.265358	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000197279.3	ZNF165	-207983	0.000480817	-0.29798	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000189298.13	ZKSCAN3	-476766	6.84e-07	-0.307282	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000220721.1	OR1F12P	-200168	9.12e-05	0.440126	5e-09
breast cancer	6_28106103	rs34662244	ENSG00000220721.1	OR1F12P	32787	2.69e-05	0.466372	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000137185.11	ZSCAN9	-118783	1.76e-08	0.313345	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000197279.3	ZNF165	24972	0.000458001	-0.295711	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000189298.13	ZKSCAN3	-243811	9.94e-07	-0.299467	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000187987.9	ZSCAN23	-337399	0.000148155	0.284623	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000219392.1	ZNF602P	-9525	7.19e-09	-0.661072	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000197062.11	ZSCAN26	-160907	2.3e-14	-0.432038	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000182477.5	OR2B8P	51938	2.25e-19	0.949692	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000235109.7	ZSCAN31	-250168	2.55e-10	0.650879	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000124613.8	ZNF391	731488	0.000207707	0.257124	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000226314.7	ZKSCAN8P1	-55678	1.74e-12	-0.547723	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000112812.15	PRSS16	858402	1.04e-05	0.202903	3e-09
breast cancer	6_28364364	rs13214023	ENSG00000197062.11	ZSCAN26	97354	1.61e-13	-0.421492	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000137185.11	ZSCAN9	139478	2.21e-08	0.31351	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000219392.1	ZNF602P	248736	5.43e-08	-0.626907	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000182477.5	OR2B8P	310199	3.71e-17	0.899597	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000124613.8	ZNF391	989749	0.000445364	0.245388	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000189298.13	ZKSCAN3	14450	2.94e-06	-0.288571	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000226314.7	ZKSCAN8P1	202583	1.35e-11	-0.530098	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000220721.1	OR1F12P	291048	2.91e-05	0.46789	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000187987.9	ZSCAN23	-79138	0.000254481	0.27656	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000235109.7	ZSCAN31	8093	7.97e-11	0.673335	1e-09
breast cancer	6_28958443	rs9257408	ENSG00000158691.14	ZSCAN12	558709	0.000269864	0.0966943	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	1.24e-12	0.35982	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	8.48e-05	0.111818	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000187987.9	ZSCAN23	514941	1.55e-09	0.221752	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	0.000202684	0.126839	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	2.34e-17	0.433089	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000226314.7	ZKSCAN8P1	796662	0.000452461	0.137266	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000158691.14	ZSCAN12	558709	0.000269864	0.0966943	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	1.24e-12	0.35982	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	8.48e-05	0.111818	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000187987.9	ZSCAN23	514941	1.55e-09	0.221752	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	0.000202684	0.126839	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	2.34e-17	0.433089	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000226314.7	ZKSCAN8P1	796662	0.000452461	0.137266	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000158691.14	ZSCAN12	558709	0.000269864	0.0966943	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	1.24e-12	0.35982	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	8.48e-05	0.111818	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000187987.9	ZSCAN23	514941	1.55e-09	0.221752	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	0.000202684	0.126839	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	2.34e-17	0.433089	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000226314.7	ZKSCAN8P1	796662	0.000452461	0.137266	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000158691.14	ZSCAN12	558709	0.000269864	0.0966943	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000235109.7	ZSCAN31	602172	1.24e-12	0.35982	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	8.48e-05	0.111818	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000187987.9	ZSCAN23	514941	1.55e-09	0.221752	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000197935.6	ZNF311	-46817	0.000202684	0.126839	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	2.34e-17	0.433089	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000226314.7	ZKSCAN8P1	796662	0.000452461	0.137266	5e-08
breast cancer	6_29280372	rs3130834	ENSG00000189298.13	ZKSCAN3	930458	8.75e-06	-0.273885	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000204632.11	HLA-G	-546595	7.25e-07	-0.518188	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000235109.7	ZSCAN31	924101	1.24e-09	0.628934	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000204644.9	ZFP57	-400738	1.15e-20	1.03783	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000066379.14	POLR1H	-781269	4.62e-07	-0.402324	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000281831.1	HCP5B	-593411	6.98e-10	0.665588	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000204622.11	HLA-J	-725599	2.06e-06	-0.377749	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000230795.3	HLA-K	-646806	5.06e-08	-0.609704	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000176998.4	HCG4	-512064	5.74e-09	-0.632418	5e-09
breast cancer	6_29388554	rs9257809	ENSG00000066379.14	POLR1H	-673087	6.32e-08	-0.419688	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000230795.3	HLA-K	-538624	2.02e-09	-0.651436	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204618.8	RNF39	-687333	0.000244482	-0.34951	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000228078.1	HLA-U	-545547	4.18e-05	0.50773	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000281831.1	HCP5B	-485229	1.02e-11	0.712317	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204644.9	ZFP57	-292556	8.53e-22	1.03774	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000176998.4	HCG4	-403882	4.01e-10	-0.659721	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204632.11	HLA-G	-438413	1.59e-07	-0.533237	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204622.11	HLA-J	-617417	2.61e-06	-0.364266	3e-08
breast cancer	6_29509637	rs1233480	ENSG00000228078.1	HLA-U	-424464	0.000414062	0.379908	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000204644.9	ZFP57	-171473	5.5e-12	0.660089	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000281831.1	HCP5B	-364146	8.67e-10	0.558697	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000204622.11	HLA-J	-496334	3.38e-05	-0.279184	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000176998.4	HCG4	-282799	1.34e-08	-0.521051	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000241370.5	RPP21	-835494	9.89e-07	-0.235536	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000066379.14	POLR1H	-552004	6.67e-06	-0.304113	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000230795.3	HLA-K	-417541	5.12e-06	-0.432463	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000204632.11	HLA-G	-317330	9.9e-05	-0.345209	5e-08
breast cancer	6_29693039	rs3116813	ENSG00000204644.9	ZFP57	11929	1.08e-24	1.09233	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000281831.1	HCP5B	-180744	8.05e-13	0.740836	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000176998.4	HCG4	-99397	2.07e-11	-0.698237	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204616.10	TRIM31	-420067	0.00033921	-0.33725	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000230795.3	HLA-K	-234139	4.71e-12	-0.739768	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000231130.1	HLA-T	-203615	0.000204124	-0.445764	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000146112.11	PPP1R18	-994856	3.96e-06	-0.193558	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204618.8	RNF39	-382848	3.75e-05	-0.388421	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000066379.14	POLR1H	-368602	1.23e-08	-0.437021	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000228078.1	HLA-U	-241062	7.05e-05	0.488074	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204632.11	HLA-G	-133928	7.92e-09	-0.579734	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204622.11	HLA-J	-312932	1.01e-07	-0.407631	6e-07
breast cancer	6_29785031	rs147680653	ENSG00000204632.11	HLA-G	-41936	1.44e-08	-0.569215	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000230795.3	HLA-K	-142147	3.71e-12	-0.742331	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000137312.14	FLOT1	-957702	9.32e-22	0.463683	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000146112.11	PPP1R18	-902864	2.84e-06	-0.196139	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000176998.4	HCG4	-7405	1.46e-11	-0.702432	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000228078.1	HLA-U	-149070	3.04e-05	0.511111	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000204622.11	HLA-J	-220940	3.03e-07	-0.391991	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000204644.9	ZFP57	103921	1.57e-25	1.10859	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000231130.1	HLA-T	-111623	0.000174647	-0.449879	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000204618.8	RNF39	-290856	4.2e-05	-0.385511	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000066379.14	POLR1H	-276610	2.86e-08	-0.425686	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000281831.1	HCP5B	-88752	4.88e-13	0.74666	1e-06
breast cancer	6_29882943	rs1611579	ENSG00000176998.4	HCG4	90507	7.57e-12	-0.694559	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000230795.3	HLA-K	-44235	9.04e-13	-0.743747	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204632.11	HLA-G	55976	1.82e-08	-0.551553	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204623.9	ZNRD1ASP	-178310	0.000329303	-0.159224	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000228078.1	HLA-U	-51158	1.37e-05	0.519604	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204644.9	ZFP57	201833	8.46e-23	1.02409	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000137312.14	FLOT1	-859790	4.27e-22	0.455854	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204622.11	HLA-J	-123028	6.17e-08	-0.403687	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000281831.1	HCP5B	9160	2.6e-13	0.736635	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000239257.1	RPL23AP1	156061	0.000568446	0.298489	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000066379.14	POLR1H	-178698	1.57e-09	-0.450558	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204616.10	TRIM31	-230163	0.000394822	-0.325052	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000231130.1	HLA-T	-13711	0.000124076	-0.448716	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000146112.11	PPP1R18	-804952	1.19e-05	-0.179267	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204618.8	RNF39	-192944	2.4e-05	-0.387695	8e-07
breast cancer	6_30003183	rs3094146	ENSG00000231130.1	HLA-T	106529	0.000348015	-0.420235	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000176998.4	HCG4	210747	1.29e-11	-0.689901	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204632.11	HLA-G	176216	3.05e-08	-0.545176	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000137312.14	FLOT1	-739550	5.36e-22	0.456669	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000230795.3	HLA-K	76005	3.65e-12	-0.727386	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000066379.14	POLR1H	-58458	7.45e-10	-0.460919	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204616.10	TRIM31	-109923	0.000245776	-0.337535	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204623.9	ZNRD1ASP	-58070	0.000128441	-0.170319	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204618.8	RNF39	-72704	3.21e-05	-0.383291	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000146112.11	PPP1R18	-684712	1.25e-06	-0.198772	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000281831.1	HCP5B	129400	7.42e-13	0.725914	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000228078.1	HLA-U	69082	6.35e-05	0.48049	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204644.9	ZFP57	322073	5.74e-22	1.00965	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204622.11	HLA-J	-2788	2.56e-07	-0.386332	7e-07
breast cancer	6_30107326	rs2523992	ENSG00000137312.14	FLOT1	-635407	2.21e-16	0.30809	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000146112.11	PPP1R18	-580569	0.000152633	-0.122055	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000176998.4	HCG4	314890	2.83e-09	-0.476206	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000230795.3	HLA-K	180148	2.96e-12	-0.57148	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000231130.1	HLA-T	210672	0.000410102	-0.324922	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000204644.9	ZFP57	426216	2.13e-07	0.439305	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000281831.1	HCP5B	233543	1.99e-05	0.343452	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000204623.9	ZNRD1ASP	46073	1.89e-10	-0.218894	2e-07
breast cancer	6_30365728	rs3094054	ENSG00000204644.9	ZFP57	684618	2.08e-18	0.910647	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204525.16	HLA-C	-906377	3.94e-06	0.365782	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000146112.11	PPP1R18	-322167	1.7e-06	-0.193376	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000137312.14	FLOT1	-377005	4.48e-26	0.48841	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204531.17	POU5F1	-815003	6.34e-05	0.357994	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204632.11	HLA-G	538761	6.23e-08	-0.525084	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000281831.1	HCP5B	491945	7.98e-11	0.65111	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000230795.3	HLA-K	438550	1.45e-09	-0.62728	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000277402.1	MIR6891	-989588	0.000122687	-0.36805	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000066379.14	POLR1H	304087	5.35e-08	-0.402781	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204536.13	CCHCR1	-792510	5.19e-12	0.41016	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000176998.4	HCG4	573292	2.44e-08	-0.563951	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204538.3	PSORS1C2	-773622	4.08e-07	-0.564651	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204622.11	HLA-J	359757	2.82e-07	-0.3792	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204540.10	PSORS1C1	-749022	1.39e-15	-0.818342	1e-07
breast cancer	6_30374976	rs115707823	ENSG00000204616.10	TRIM31	261870	7.89e-05	-0.319931	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204540.10	PSORS1C1	-739774	3.99e-07	-0.47348	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204644.9	ZFP57	693866	9.73e-15	0.726568	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000137312.14	FLOT1	-367757	1.22e-16	0.349799	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000230795.3	HLA-K	447798	6.16e-07	-0.465204	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000146112.11	PPP1R18	-312919	0.000137303	-0.1384	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204536.13	CCHCR1	-783262	7.76e-08	0.288356	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000176998.4	HCG4	582540	3.41e-05	-0.377479	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204632.11	HLA-G	548009	0.000238129	-0.321471	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204622.11	HLA-J	369005	3.43e-06	-0.307501	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000066379.14	POLR1H	313335	5.52e-08	-0.360008	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000281831.1	HCP5B	501193	7e-11	0.584216	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204616.10	TRIM31	261870	7.89e-05	-0.319931	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204540.10	PSORS1C1	-739774	3.99e-07	-0.47348	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204644.9	ZFP57	693866	9.73e-15	0.726568	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000137312.14	FLOT1	-367757	1.22e-16	0.349799	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000230795.3	HLA-K	447798	6.16e-07	-0.465204	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000146112.11	PPP1R18	-312919	0.000137303	-0.1384	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204536.13	CCHCR1	-783262	7.76e-08	0.288356	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000176998.4	HCG4	582540	3.41e-05	-0.377479	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204632.11	HLA-G	548009	0.000238129	-0.321471	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000204622.11		369005	3.43e-06	-0.307501	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000066379.14		313335	5.52e-08	-0.360008	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000281831.1		501193	7e-11	0.584216	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000237669.1		466410	0.00029291	0.270262	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204644.9		792416	1.83e-16	0.820755	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000281831.1		599743	1.31e-08	0.545853	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000066379.14		411885	1.65e-06	-0.339684	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204622.11		467555	3.26e-06	-0.328653	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204536.13		-684712	1.21e-11	0.384761	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000176998.4		681090	1.62e-06	-0.46453	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000206337.10		-989845	1.04e-05	-0.275797	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000137312.14		-269207	2.17e-28	0.485126	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204540.10		-641224	1.6e-16	-0.804758	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204538.3		-665824	7.24e-07	-0.527273	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000280128.1		187472	7.42e-11	0.346716	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204632.11		646559	3.08e-06	-0.433499	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204531.17		-707205	2.82e-05	0.357291	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000277402.1		-881790	5.83e-05	-0.367266	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000146112.11		-214369	5.57e-07	-0.192761	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000230795.3		546348	6.29e-08	-0.537169	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204618.8		397639	0.000233871	-0.319328	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204525.16		-798579	9.6e-05	0.295887	2e-06
breast cancer	6_30576624	rs3132610	ENSG00000230795.3		649446	1.94e-08	-0.567827	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000277402.1		-778692	0.000228245	-0.343694	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000146112.11		-111271	1.82e-08	-0.220203	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000225851.1		-805664	0.000263827	-0.365252	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204516.9		-918257	0.000224392	0.243275	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204644.9		895514	1.86e-17	0.862137	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204540.10		-538126	3.31e-20	-0.908404	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000281831.1		702841	8.2e-08	0.525846	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000137312.14		-166109	8.78e-31	0.513503	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204531.17		-604107	1.22e-05	0.380199	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000176998.4		784188	3.46e-08	-0.542649	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000206337.10		-886747	1.51e-05	-0.276119	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204525.16		-695481	1.43e-06	0.371294	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000280128.1		290570	6.98e-10	0.335397	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204632.11		749657	1.26e-06	-0.45863	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204538.3		-562726	1.73e-08	-0.609279	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000066379.14		514983	1.08e-06	-0.352263	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204622.11		570653	2.96e-06	-0.336405	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204536.13		-581614	6.98e-13	0.414278	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000137411.16		-337581	8.98e-05	-0.288195	1e-06
breast cancer	6_30682249	rs9262142	ENSG00000240053.8		-987918	1.19e-06	0.19574	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000280128.1		396195	3.83e-10	0.34102	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000281831.1		808466	2.7e-08	0.545741	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000137411.16		-231956	3.94e-05	-0.302863	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000230795.3		755071	1.16e-08	-0.577643	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204531.17		-498482	1.82e-05	0.373367	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204540.10		-432501	5.23e-21	-0.928001	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204536.13		-475989	1.48e-13	0.426586	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204516.9		-812632	9.26e-05	0.258055	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000066379.14		620608	1.81e-06	-0.345683	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000225851.1		-700039	0.000227238	-0.369778	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204622.11		676278	4.38e-06	-0.33138	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204632.11		855282	5.38e-07	-0.474917	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000176998.4		889813	1.79e-08	-0.554688	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000206337.10		-781122	6.32e-06	-0.28844	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000277402.1		-673067	0.000140896	-0.355552	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204538.3		-457101	1.38e-08	-0.614602	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204525.16		-589856	2.26e-06	0.365122	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000137312.14		-60484	9.77e-31	0.514194	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000146112.11		-5646	1.9e-08	-0.220393	3e-06
breast cancer	6_30793795	rs3129984	ENSG00000225851.1		-588493	1.65e-05	-0.41978	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204622.11		787824	2.86e-06	-0.328765	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204538.3		-345555	4.45e-09	-0.617966	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000277402.1		-561521	0.000103518	-0.353018	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204525.16		-478310	1.93e-06	0.35791	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204540.10		-320955	8.09e-23	-0.941156	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204536.13		-364443	2.53e-15	0.443087	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000137312.14		51062	1.88e-29	0.490913	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000137411.16		-120410	5.64e-05	-0.289035	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204531.17		-386936	0.000157228	0.321296	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000146112.11		105900	1.39e-07	-0.201448	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000230795.3		866617	2.95e-08	-0.54712	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000280128.1		507741	6.58e-09	0.308557	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000206337.10		-669576	7.4e-07	-0.307331	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204410.14		-946153	5.42e-05	-0.15378	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204632.11		966828	1.59e-07	-0.483089	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000281831.1		920012	7.92e-08	0.513715	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000252743.1		-963258	0.000181996	-0.372299	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000066379.14		732154	1.58e-05	-0.305024	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204516.9		-701086	2.62e-05	0.269936	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000240053.8		-876372	1.3e-06	0.189941	8e-06
breast cancer	6_31347004	rs115392158	ENSG00000204308.7		-831350	3.33e-05	-0.135138	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000244731.7		-635020	1.01e-14	-0.364138	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000146112.11		659109	9.28e-05	-0.103147	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000250535.1		-666266	4.49e-05	-0.251298	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204338.8		-658685	3.91e-12	-0.342689	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204536.13		188766	1.54e-18	0.335012	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000277402.1		-8312	8.25e-05	-0.245415	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204528.3		169105	0.000197215	-0.264155	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204540.10		232254	1.87e-23	-0.653998	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204538.3		207654	2.86e-09	-0.428788	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000206337.10		-116367	2.6e-07	-0.218996	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000228789.6		293554	1.57e-06	-0.299695	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000137312.14		604271	3.96e-08	0.171938	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000137310.11		188462	0.000122822	0.143979	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204308.7		-831350	3.33e-05	-0.135138	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000244731.7		-635020	1.01e-14	-0.364138	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000146112.11		659109	9.28e-05	-0.103147	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000250535.1		-666266	4.49e-05	-0.251298	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204338.8		-658685	3.91e-12	-0.342689	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204536.13		188766	1.54e-18	0.335012	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000277402.1		-8312	8.25e-05	-0.245415	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204528.3		169105	0.000197215	-0.264155	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204540.10		232254	1.87e-23	-0.653998	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204538.3		207654	2.86e-09	-0.428788	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000206337.10		-116367	2.6e-07	-0.218996	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000228789.6		293554	1.57e-06	-0.299695	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000137312.14		604271	3.96e-08	0.171938	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000137310.11		188462	0.000122822	0.143979	3e-07
breast cancer	6_32699696	rs147527678	ENSG00000196735.11		71517	0.000103186	-0.190062	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000198502.5		169409	1.51e-07	-0.380504	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000204257.14		-269398	2e-12	0.355575	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000224389.8		684934	1.19e-05	-0.212701	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000223534.1		39341	1.47e-07	-0.271713	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000244731.7		717672	8.76e-17	-0.42316	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000232629.8		-63838	1.29e-13	0.490242	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000204410.14		959748	9.04e-05	-0.111057	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000204338.8		694007	6.68e-15	-0.415036	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000179344.16		31313	9.86e-18	-0.533428	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000196735.11		71517	0.000103186	-0.190062	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000198502.5		169409	1.51e-07	-0.380504	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000204257.14		-269398	2e-12	0.355575	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000224389.8		684934	1.19e-05	-0.212701	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000223534.1		39341	1.47e-07	-0.271713	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000244731.7		717672	8.76e-17	-0.42316	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000232629.8		-63838	1.29e-13	0.490242	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000204410.14		959748	9.04e-05	-0.111057	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000204338.8		694007	6.68e-15	-0.415036	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000179344.16		31313	9.86e-18	-0.533428	5e-07
breast cancer	6_33272092	rs17215231	ENSG00000235863.3		-5040	4.84e-07	0.245184	9e-13
breast cancer	6_33272092	rs17215231	ENSG00000231500.6		44	1.02e-98	-0.796668	9e-13
breast cancer	6_36795636	rs72856431	ENSG00000164530.13		-152627	6.59e-05	-0.504434	9e-07
breast cancer	6_43259403	rs111342015	ENSG00000240625.3		222903	1.87e-06	0.47562	9e-08
breast cancer	6_43259403	rs111342015	ENSG00000112667.12		29919	3.16e-16	-0.332777	9e-08
breast cancer	6_80384570	rs12207986	ENSG00000279022.1		-56160	4.21e-05	-0.190903	2e-09
breast cancer	6_80384570	rs12207986	ENSG00000260645.1		-82388	0.000403874	-0.113562	2e-09
breast cancer	6_80384570	rs12207986	ENSG00000233967.6		-58774	4.86e-09	-0.210219	2e-09
breast cancer	6_80384570	rs12207986	ENSG00000279022.1		-56160	4.21e-05	-0.190903	2e-10
breast cancer	6_80384570	rs12207986	ENSG00000260645.1		-82388	0.000403874	-0.113562	2e-10
breast cancer	6_80384570	rs12207986	ENSG00000233967.6		-58774	4.86e-09	-0.210219	2e-10
breast cancer	6_80398959	rs4604234	ENSG00000272129.1		43535	4.42e-05	-0.409285	6e-06
breast cancer	6_80496839	rs9449003	ENSG00000233967.6		53495	4.27e-07	0.179742	3e-06
breast cancer	7_100437651	rs117911427	ENSG00000085514.15		64206	1.36e-13	1.22486	7e-06
breast cancer	7_100437651	rs117911427	ENSG00000242294.6		101239	2.17e-15	0.917058	7e-06
breast cancer	7_100437651	rs117911427	ENSG00000146833.15		518051	0.000475687	-0.378339	7e-06
breast cancer	7_100437651	rs117911427	ENSG00000121716.20		85475	6.92e-14	0.826291	7e-06
breast cancer	7_102478605	rs369574511	ENSG00000160991.15		45499	1.13e-06	0.104122	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000161036.12		13676	5.63e-30	-0.332838	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000233297.4		-211864	5.68e-08	0.291741	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000260097.2		122161	3.94e-06	0.236726	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000005075.15		-302	7.92e-08	0.112152	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000105808.17		-138152	7.15e-10	0.307992	2e-07
breast cancer	7_103022031	rs7458786	ENSG00000279168.2		342736	6.31e-08	-0.397515	9e-06
breast cancer	7_103022031	rs7458786	ENSG00000170629.14		-258379	8.41e-06	0.191611	9e-06
breast cancer	7_103022031	rs7458786	ENSG00000161036.12		557102	6.84e-06	0.189231	9e-06
breast cancer	7_103251337	rs6946892	ENSG00000228049.7		579708	0.000212589	0.231551	1e-07
breast cancer	7_103251337	rs6946892	ENSG00000161036.12		786408	0.000167108	-0.122557	1e-07
breast cancer	7_12721416	rs7810893	ENSG00000122644.12		34560	8.83e-06	-0.161377	4e-06
breast cancer	7_144351809	rs62485509	ENSG00000228960.5		57329	0.000134816	-0.277775	4e-12
breast cancer	7_144351809	rs62485509	ENSG00000170356.8		98852	2.29e-11	0.538603	4e-12
breast cancer	7_144351809	rs62485509	ENSG00000225932.3		168343	0.000115117	-0.292811	4e-12
breast cancer	7_144351809	rs62485509	ENSG00000213214.4		163414	7.97e-05	0.279316	4e-12
breast cancer	7_144351809	rs62485509	ENSG00000244693.1		82521	2.34e-06	0.353803	4e-12
breast cancer	7_144351809	rs62485509	ENSG00000204959.4		64843	7.65e-16	-0.505756	4e-12
breast cancer	7_144377836	rs720475	ENSG00000213214.4		189441	3.3e-06	0.286638	4e-10
breast cancer	7_144377836	rs720475	ENSG00000170356.8		124879	1.36e-10	0.452296	4e-10
breast cancer	7_144377836	rs720475	ENSG00000204959.4		90870	6.66e-16	-0.442429	4e-10
breast cancer	7_144377836	rs720475	ENSG00000244693.1		108548	1.6e-06	0.313868	4e-10
breast cancer	7_144377836	rs720475	ENSG00000213214.4		189441	3.3e-06	0.286638	7e-11
breast cancer	7_144377836	rs720475	ENSG00000170356.8		124879	1.36e-10	0.452296	7e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4		90870	6.66e-16	-0.442429	7e-11
breast cancer	7_144377836	rs720475	ENSG00000244693.1		108548	1.6e-06	0.313868	7e-11
breast cancer	7_144377836	rs720475	ENSG00000213214.4		189441	3.3e-06	0.286638	1e-11
breast cancer	7_144377836	rs720475	ENSG00000170356.8		124879	1.36e-10	0.452296	1e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4		90870	6.66e-16	-0.442429	1e-11
breast cancer	7_144377836	rs720475	ENSG00000244693.1		108548	1.6e-06	0.313868	1e-11
breast cancer	7_144377836	rs720475	ENSG00000213214.4		189441	3.3e-06	0.286638	2e-11
breast cancer	7_144377836	rs720475	ENSG00000170356.8		124879	1.36e-10	0.452296	2e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4		90870	6.66e-16	-0.442429	2e-11
breast cancer	7_144377836	rs720475	ENSG00000244693.1		108548	1.6e-06	0.313868	2e-11
breast cancer	7_144377836	rs720475	ENSG00000213214.4		189441	3.3e-06	0.286638	7e-12
breast cancer	7_144377836	rs720475	ENSG00000170356.8		124879	1.36e-10	0.452296	7e-12
breast cancer	7_144377836	rs720475	ENSG00000204959.4		90870	6.66e-16	-0.442429	7e-12
breast cancer	7_144377836	rs720475	ENSG00000244693.1		108548	1.6e-06	0.313868	7e-12
breast cancer	7_144377836	rs720475	ENSG00000213214.4		189441	3.3e-06	0.286638	1e-08
breast cancer	7_144377836	rs720475	ENSG00000170356.8		124879	1.36e-10	0.452296	1e-08
breast cancer	7_144377836	rs720475	ENSG00000204959.4		90870	6.66e-16	-0.442429	1e-08
breast cancer	7_144377836	rs720475	ENSG00000244693.1		108548	1.6e-06	0.313868	1e-08
breast cancer	7_144477198	rs13230714	ENSG00000204959.4		190232	6.72e-11	-0.333886	1e-06
breast cancer	7_144477198	rs13230714	ENSG00000271079.1		905397	4.95e-06	-0.290442	1e-06
breast cancer	7_74696373	rs74910854	ENSG00000196275.13		-155178	5.93e-28	0.783124	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000278416.1		-663177	0.000154407	-0.383678	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000277072.4		-194237	0.000114929	0.246144	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000184616.8		-216883	2.62e-05	0.422717	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000277053.4		-541323	8.01e-33	-0.917494	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000205583.13		-662884	0.000175497	-0.34945	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000123965.13		-197743	1.75e-15	0.780646	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000263001.5		38706	1.5e-25	0.440675	5e-06
breast cancer	7_94484487	rs17268829	ENSG00000127990.15		-171722	1.66e-13	0.203219	4e-15
breast cancer	7_94484487	rs17268829	ENSG00000127990.15		-171722	1.66e-13	0.203219	5e-13
breast cancer	7_94758031	rs10269006	ENSG00000231170.5		-838651	0.000120604	0.222268	5e-07
breast cancer	8_103189173	rs12548629	ENSG00000164930.11		-109658	0.000110914	-0.102638	3e-07
breast cancer	8_120102785	rs1519814	ENSG00000187955.11		43005	8.93e-05	-0.124755	8e-07
breast cancer	8_17926905	rs11779988	ENSG00000078674.17		4065	2.23e-08	-0.156409	2e-06
breast cancer	8_17926905	rs11779988	ENSG00000245281.6		-158122	3.51e-07	-0.23285	2e-06
breast cancer	8_17926905	rs11779988	ENSG00000104760.16		16540	9.56e-07	0.266628	2e-06
breast cancer	8_17926905	rs11779988	ENSG00000104763.18		-158093	1.37e-20	-0.227566	2e-06
breast cancer	8_220692	rs66823261	ENSG00000172748.13		-11540	6.23e-05	-0.142784	1e-08
breast cancer	8_220692	rs66823261	ENSG00000272812.1		-12427	2.56e-05	0.164975	1e-08
breast cancer	8_220692	rs66823261	ENSG00000223508.5		-11444	1.25e-10	0.353787	1e-08
breast cancer	8_220692	rs66823261	ENSG00000273402.1		-16353	1.07e-09	0.293733	1e-08
breast cancer	8_220692	rs66823261	ENSG00000272240.1		-14195	6.02e-22	0.441904	1e-08
breast cancer	8_220692	rs66823261	ENSG00000172748.13		-11540	6.23e-05	-0.142784	3e-07
breast cancer	8_220692	rs66823261	ENSG00000272812.1		-12427	2.56e-05	0.164975	3e-07
breast cancer	8_220692	rs66823261	ENSG00000223508.5		-11444	1.25e-10	0.353787	3e-07
breast cancer	8_220692	rs66823261	ENSG00000273402.1		-16353	1.07e-09	0.293733	3e-07
breast cancer	8_220692	rs66823261	ENSG00000272240.1		-14195	6.02e-22	0.441904	3e-07
breast cancer	8_220692	rs66823261	ENSG00000172748.13		-11540	6.23e-05	-0.142784	6e-09
breast cancer	8_220692	rs66823261	ENSG00000272812.1		-12427	2.56e-05	0.164975	6e-09
breast cancer	8_220692	rs66823261	ENSG00000223508.5		-11444	1.25e-10	0.353787	6e-09
breast cancer	8_220692	rs66823261	ENSG00000273402.1		-16353	1.07e-09	0.293733	6e-09
breast cancer	8_220692	rs66823261	ENSG00000272240.1		-14195	6.02e-22	0.441904	6e-09
breast cancer	8_220692	rs66823261	ENSG00000172748.13		-11540	6.23e-05	-0.142784	3e-08
breast cancer	8_220692	rs66823261	ENSG00000272812.1		-12427	2.56e-05	0.164975	3e-08
breast cancer	8_220692	rs66823261	ENSG00000223508.5		-11444	1.25e-10	0.353787	3e-08
breast cancer	8_220692	rs66823261	ENSG00000273402.1		-16353	1.07e-09	0.293733	3e-08
breast cancer	8_220692	rs66823261	ENSG00000272240.1		-14195	6.02e-22	0.441904	3e-08
breast cancer	8_22634616	rs6558174	ENSG00000158941.16		29984	7.97e-12	0.132064	3e-06
breast cancer	8_30372068	rs7834448	ENSG00000254109.5		-13333	3.13e-09	-0.215872	7e-06
breast cancer	8_30372068	rs7834448	ENSG00000254152.1		21721	1.57e-08	0.333769	7e-06
breast cancer	8_30372068	rs7834448	ENSG00000127589.4		20195	3.68e-08	0.340148	7e-06
breast cancer	8_80443628	rs16907718	ENSG00000251867.3		-41990	0.000110958	-0.155615	7e-06
breast cancer	8_80887958	rs6473252	ENSG00000164684.13		13177	6.35e-06	0.104182	8e-07
breast cancer	9_103912867	rs718857	ENSG00000136824.18		-181393	5.52e-28	-0.374043	2e-06
breast cancer	9_104094512	rs4742903	ENSG00000270332.1		1439	7.33e-06	0.173729	2e-07
breast cancer	9_104094512	rs4742903	ENSG00000136824.18		252	4.99e-66	-0.52957	2e-07
breast cancer	9_104094512	rs4742903	ENSG00000270332.1		1439	7.33e-06	0.173729	3e-08
breast cancer	9_104094512	rs4742903	ENSG00000136824.18		252	4.99e-66	-0.52957	3e-08
breast cancer	9_133463535	rs3124765	ENSG00000148290.9		106859	1.06e-12	0.285221	2e-06
breast cancer	9_34129841	rs10814070	ENSG00000186638.16		-181530	0.000357199	0.141348	2e-06
breast cancer	9_34723038	rs10814138	ENSG00000230074.1		44938	9.75e-06	-0.206904	3e-06