DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE breast cancer 1_119894128 rs35273427 ENSG00000203859.9 HSD3B2 479197 1.5e-05 0.955831 2e-07 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.6e-05 0.516605 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.6e-05 0.516605 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.6e-05 0.516605 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.6e-05 0.516605 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.6e-05 0.516605 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.6e-05 0.516605 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.6e-05 0.516605 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.6e-05 0.516605 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.6e-05 0.516605 9e-13 breast cancer 1_155212052 rs2974935 ENSG00000160766.14 GBAP1 -15370 7.98e-08 -0.392499 2e-07 breast cancer 1_155212373 rs2075570 ENSG00000160766.14 GBAP1 -15049 7.98e-08 -0.392499 5e-06 breast cancer 1_91555907 rs12134245 ENSG00000097046.12 CDC7 55014 4.52e-10 -0.470586 4e-06 breast cancer 10_121904429 rs7899628 ENSG00000226864.2 ATE1-AS1 -23883 6.35e-08 -0.581242 9e-10 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 9.48e-06 -0.492895 1e-18 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 9.48e-06 -0.492895 2e-13 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 9.48e-06 -0.492895 2e-11 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 9.48e-06 -0.492895 1e-10 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 9.48e-06 -0.492895 3e-09 breast cancer 11_1887776 rs3817198 ENSG00000226416.1 MRPL23-AS1 -102144 9.48e-06 -0.492895 6e-21 breast cancer 11_803017 rs6597981 ENSG00000177595.17 PIDD1 -6629 2.24e-08 0.325031 1e-12 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 2e-13 0.510647 1e-12 breast cancer 11_803017 rs6597981 ENSG00000177595.17 PIDD1 -6629 2.24e-08 0.325031 3e-12 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 2e-13 0.510647 3e-12 breast cancer 15_50402109 rs4774565 ENSG00000244879.6 GABPB1-AS1 46700 2.1e-08 -0.624927 2e-06 breast cancer 15_75516399 rs8027365 ENSG00000140400.16 MAN2C1 148245 5.55e-13 0.652215 1e-07 breast cancer 17_45394123 rs4763 ENSG00000214401.4 KANSL1-AS1 -799453 1.33e-18 1.14473 2e-08 breast cancer 17_45394123 rs4763 ENSG00000214425.7 LRRC37A4P -156212 4.12e-15 -0.964314 2e-08 breast cancer 17_45394123 rs4763 ENSG00000176681.14 LRRC37A -898610 1.97e-05 0.543388 2e-08 breast cancer 17_45394123 rs4763 ENSG00000262500.1 MAPK8IP1P1 -849483 1.02e-14 0.944517 2e-08 breast cancer 17_45394123 rs4763 ENSG00000204650.14 LINC02210 -226205 1.51e-15 0.618763 2e-08 breast cancer 17_45394123 rs4763 ENSG00000263503.1 MAPK8IP1P2 -208217 2.41e-12 0.932174 2e-08 breast cancer 17_45394123 rs4763 ENSG00000264070.1 DND1P1 -191748 2.86e-11 0.896504 2e-08 breast cancer 17_45941122 rs62061734 ENSG00000176681.14 LRRC37A -351611 1.64e-05 0.496778 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000262500.1 MAPK8IP1P1 -302484 1.84e-17 0.918133 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000263503.1 MAPK8IP1P2 338782 1.8e-15 0.93219 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000264070.1 DND1P1 355251 6.03e-18 0.992765 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000204650.14 LINC02210 320794 4.41e-26 0.678165 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214425.7 LRRC37A4P 390787 6.16e-22 -1.0094 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214401.4 KANSL1-AS1 -252454 1.2e-22 1.11452 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000238083.7 LRRC37A2 -570389 9.7e-15 0.811414 8e-12 breast cancer 17_46751565 rs199533 ENSG00000238083.7 LRRC37A2 240054 1.06e-18 0.882068 5e-08 breast cancer 17_46751565 rs199533 ENSG00000185829.17 ARL17A 171883 2.31e-05 0.505087 5e-08 breast cancer 17_46751565 rs199533 ENSG00000176681.14 LRRC37A 458832 1.73e-07 0.584139 5e-08 breast cancer 17_46751565 rs199533 ENSG00000214401.4 KANSL1-AS1 557989 1.06e-34 1.25145 5e-08 breast cancer 17_46751565 rs199533 ENSG00000262500.1 MAPK8IP1P1 507959 1.57e-27 1.06378 5e-08 breast cancer 17_46788237 rs199498 ENSG00000214401.4 KANSL1-AS1 594661 2.27e-20 1.06953 2e-08 breast cancer 17_46788237 rs199498 ENSG00000238083.7 LRRC37A2 276726 4.1e-13 0.768458 2e-08 breast cancer 17_46788237 rs199498 ENSG00000262500.1 MAPK8IP1P1 544631 2.75e-15 0.866726 2e-08 breast cancer 17_46788237 rs199498 ENSG00000176681.14 LRRC37A 495504 1.45e-08 0.632876 2e-08 breast cancer 19_43919418 rs375066 ENSG00000176222.8 ZNF404 35367 1.06e-06 -0.337794 2e-14 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 8.38e-06 -0.590255 9e-14 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 8.38e-06 -0.590255 4e-06 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 8.38e-06 -0.590255 3e-17 breast cancer 3_156927968 rs7637701 ENSG00000240875.5 LINC00886 110906 1.28e-05 -0.385906 1e-06 breast cancer 5_128098106 rs1112956 ENSG00000245937.7 SLC12A2-DT 14934 2.91e-09 0.492735 9e-06 breast cancer 5_56977866 rs10036895 ENSG00000155542.11 SETD9 68606 3.17e-11 0.730193 2e-12 breast cancer 5_81972251 rs111549985 ENSG00000152348.15 ATG10 226 5.22e-19 0.757793 6e-12 breast cancer 5_81972251 rs111549985 ENSG00000205464.11 ATP6AP1L -307211 2.86e-16 0.755307 6e-12 breast cancer 5_82161539 rs2407064 ENSG00000152348.15 ATG10 189514 3.51e-18 -0.735704 3e-08 breast cancer 5_82161539 rs2407064 ENSG00000205464.11 ATP6AP1L -117923 1.06e-17 -0.771476 3e-08 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 1.66e-18 -0.756107 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 2.4e-19 -0.814773 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 1.66e-18 -0.756107 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 2.4e-19 -0.814773 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 1.66e-18 -0.756107 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 2.4e-19 -0.814773 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 1.66e-18 -0.756107 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 2.4e-19 -0.814773 4e-09 breast cancer 5_82340549 rs2407156 ENSG00000152348.15 ATG10 368524 4.67e-12 0.679662 2e-06 breast cancer 5_82340549 rs2407156 ENSG00000205464.11 ATP6AP1L 61087 2.69e-18 0.859186 2e-06 breast cancer 6_25710343 rs68006638 ENSG00000186470.13 BTN3A2 -654816 6.45e-09 -1.13905 2e-07 breast cancer 6_25874195 rs13198474 ENSG00000186470.13 BTN3A2 -490964 1.89e-09 -1.14115 2e-07 breast cancer 6_26175638 rs17598658 ENSG00000186470.13 BTN3A2 -189521 2.41e-15 -1.24585 2e-09 breast cancer 6_26463346 rs13195401 ENSG00000186470.13 BTN3A2 98187 2.81e-19 -1.13277 2e-09 breast cancer 6_26993501 rs34546498 ENSG00000186470.13 BTN3A2 628342 7.53e-19 -1.15467 9e-10 breast cancer 6_27307055 rs56114371 ENSG00000186470.13 BTN3A2 941896 7.53e-19 -1.15467 2e-09 breast cancer 6_27873148 rs45509595 ENSG00000197062.11 ZSCAN26 -393862 8.84e-05 -0.365917 5e-09 breast cancer 6_28106103 rs34662244 ENSG00000197062.11 ZSCAN26 -160907 8.84e-05 -0.365917 3e-09 breast cancer 6_28364364 rs13214023 ENSG00000197062.11 ZSCAN26 97354 8.84e-05 -0.365917 1e-09 breast cancer 6_28958443 rs9257408 ENSG00000187987.9 ZSCAN23 514941 1.23e-06 0.411231 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000187987.9 ZSCAN23 514941 1.23e-06 0.411231 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000187987.9 ZSCAN23 514941 1.23e-06 0.411231 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000187987.9 ZSCAN23 514941 1.23e-06 0.411231 5e-07 breast cancer 6_29280372 rs3130834 ENSG00000281831.1 HCP5B -593411 1.6e-05 0.781995 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000204644.9 ZFP57 -400738 3.74e-07 1.01691 5e-09 breast cancer 6_29388554 rs9257809 ENSG00000281831.1 HCP5B -485229 1.6e-05 0.781995 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000204644.9 ZFP57 -292556 3.74e-07 1.01691 3e-08 breast cancer 6_29509637 rs1233480 ENSG00000204644.9 ZFP57 -171473 3.85e-07 0.93069 5e-08 breast cancer 6_29693039 rs3116813 ENSG00000204644.9 ZFP57 11929 1.59e-08 1.07223 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000281831.1 HCP5B -180744 9.41e-06 0.769269 6e-07 breast cancer 6_29785031 rs147680653 ENSG00000204644.9 ZFP57 103921 1.59e-08 1.07223 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000281831.1 HCP5B -88752 9.41e-06 0.769269 1e-06 breast cancer 6_29882943 rs1611579 ENSG00000204644.9 ZFP57 201833 1.59e-08 1.07223 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000281831.1 HCP5B 9160 9.41e-06 0.769269 8e-07 breast cancer 6_30003183 rs3094146 ENSG00000204644.9 ZFP57 322073 1.59e-08 1.07223 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000281831.1 HCP5B 129400 9.41e-06 0.769269 7e-07 breast cancer 6_30365728 rs3094054 ENSG00000204644.9 ZFP57 684618 6.55e-07 0.94126 1e-07 breast cancer 6_30374976 rs115707823 ENSG00000204644.9 ZFP57 693866 1.39e-06 0.757756 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000204644.9 ZFP57 693866 1.39e-06 0.757756 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204644.9 ZFP57 792416 1.08e-05 0.827539 2e-06 breast cancer 6_30576624 rs3132610 ENSG00000204516.9 MICB -918257 2.44e-06 0.777573 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204644.9 ZFP57 895514 4.27e-06 0.871502 1e-06 breast cancer 6_30682249 rs9262142 ENSG00000204516.9 MICB -812632 2.44e-06 0.777573 3e-06 breast cancer 6_30793795 rs3129984 ENSG00000204516.9 MICB -701086 2.44e-06 0.777573 8e-06 breast cancer 6_32699696 rs147527678 ENSG00000179344.16 HLA-DQB1 31313 7.06e-07 -0.679448 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000179344.16 HLA-DQB1 31313 7.06e-07 -0.679448 5e-07 breast cancer 6_33272092 rs17215231 ENSG00000231500.6 RPS18 44 5.71e-09 -0.670816 9e-13 breast cancer 6_43259403 rs111342015 ENSG00000112667.12 DNPH1 29919 2.62e-10 -0.526711 9e-08 breast cancer 7_102478605 rs369574511 ENSG00000161036.12 LRWD1 13676 1.25e-06 -0.384392 2e-07 breast cancer 7_74696373 rs74910854 ENSG00000196275.13 GTF2IRD2 -155178 1.47e-06 0.517716 5e-06