DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE breast cancer 1_100414772 rs612683 ENSG00000079335.18 CDC14A 63038 1.53e-13 -0.136837 3e-07 breast cancer 1_10506158 rs616488 ENSG00000142655.12 PEX14 31271 1.75e-07 -0.11653 4e-11 breast cancer 1_10506158 rs616488 ENSG00000142655.12 PEX14 31271 1.75e-07 -0.11653 5e-20 breast cancer 1_10506158 rs616488 ENSG00000142655.12 PEX14 31271 1.75e-07 -0.11653 2e-23 breast cancer 1_10506158 rs616488 ENSG00000142655.12 PEX14 31271 1.75e-07 -0.11653 2e-10 breast cancer 1_10506158 rs616488 ENSG00000142655.12 PEX14 31271 1.75e-07 -0.11653 4e-18 breast cancer 1_10506158 rs616488 ENSG00000142655.12 PEX14 31271 1.75e-07 -0.11653 9e-09 breast cancer 1_10506158 rs616488 ENSG00000142655.12 PEX14 31271 1.75e-07 -0.11653 1e-08 breast cancer 1_10535965 rs2506889 ENSG00000142655.12 PEX14 61078 6.52e-12 -0.157811 2e-20 breast cancer 1_10536284 rs12375 ENSG00000142655.12 PEX14 61397 6.52e-12 -0.157811 1e-05 breast cancer 1_109637134 rs17024629 ENSG00000168765.16 GSTM4 -18947 6.98e-30 0.6638 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000213366.12 GSTM2 -30888 1.6e-08 0.30935 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000134184.12 GSTM1 -50680 1.31e-07 0.377168 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000168765.16 GSTM4 -18947 6.98e-30 0.6638 3e-08 breast cancer 1_109637134 rs17024629 ENSG00000213366.12 GSTM2 -30888 1.6e-08 0.30935 3e-08 breast cancer 1_109637134 rs17024629 ENSG00000134184.12 GSTM1 -50680 1.31e-07 0.377168 3e-08 breast cancer 1_109637134 rs17024629 ENSG00000168765.16 GSTM4 -18947 6.98e-30 0.6638 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000213366.12 GSTM2 -30888 1.6e-08 0.30935 1e-06 breast cancer 1_109637134 rs17024629 ENSG00000134184.12 GSTM1 -50680 1.31e-07 0.377168 1e-06 breast cancer 1_113903258 rs7513707 ENSG00000134262.12 AP4B1 -1882 0.000107622 -0.166341 2e-11 breast cancer 1_113905767 rs11552449 ENSG00000134262.12 AP4B1 627 8.1e-05 -0.171275 3e-09 breast cancer 1_113905767 rs11552449 ENSG00000134262.12 AP4B1 627 8.1e-05 -0.171275 5e-11 breast cancer 1_113905767 rs11552449 ENSG00000134262.12 AP4B1 627 8.1e-05 -0.171275 2e-08 breast cancer 1_113905767 rs11552449 ENSG00000134262.12 AP4B1 627 8.1e-05 -0.171275 6e-07 breast cancer 1_113905767 rs11552449 ENSG00000134262.12 AP4B1 627 8.1e-05 -0.171275 1e-09 breast cancer 1_119942712 rs6697258 ENSG00000270231.3 NBPF8 -493641 7.25e-09 0.438174 2e-15 breast cancer 1_121121848 rs369304377 ENSG00000171943.11 SRGAP2C -62962 0.000140246 -0.116464 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000270231.3 NBPF8 685495 2.89e-50 0.548184 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000270392.2 PFN1P2 687796 1.5e-05 0.220284 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000226067.6 LINC00623 169409 1.61e-09 0.240401 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000273136.6 NBPF26 397925 6.72e-12 0.327112 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000275131.2 PDE4DIPP2 420559 1.02e-05 -0.108965 2e-29 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 5.96e-12 0.318096 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 1.54e-05 -0.128043 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000275131.2 PDE4DIPP2 837526 3.78e-07 -0.121365 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 3.15e-09 0.229107 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 5.96e-12 0.318096 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 1.54e-05 -0.128043 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000275131.2 PDE4DIPP2 837526 3.78e-07 -0.121365 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 3.15e-09 0.229107 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 5.96e-12 0.318096 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 1.54e-05 -0.128043 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000275131.2 PDE4DIPP2 837526 3.78e-07 -0.121365 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 3.15e-09 0.229107 4e-20 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 5.96e-12 0.318096 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 1.54e-05 -0.128043 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000275131.2 PDE4DIPP2 837526 3.78e-07 -0.121365 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 3.15e-09 0.229107 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 5.96e-12 0.318096 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 1.54e-05 -0.128043 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000275131.2 PDE4DIPP2 837526 3.78e-07 -0.121365 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 3.15e-09 0.229107 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 5.96e-12 0.318096 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 1.54e-05 -0.128043 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000275131.2 PDE4DIPP2 837526 3.78e-07 -0.121365 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 3.15e-09 0.229107 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 5.96e-12 0.318096 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 1.54e-05 -0.128043 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000275131.2 PDE4DIPP2 837526 3.78e-07 -0.121365 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 3.15e-09 0.229107 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 5.96e-12 0.318096 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 1.54e-05 -0.128043 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000275131.2 PDE4DIPP2 837526 3.78e-07 -0.121365 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 3.15e-09 0.229107 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 5.96e-12 0.318096 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000171943.11 SRGAP2C 354005 1.54e-05 -0.128043 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000275131.2 PDE4DIPP2 837526 3.78e-07 -0.121365 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000226067.6 LINC00623 586376 3.15e-09 0.229107 8e-54 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 5.53e-12 0.347938 5e-09 breast cancer 1_145790097 rs12405132 ENSG00000198483.12 ANKRD35 -95769 3.13e-11 0.26833 5e-09 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 5.53e-12 0.347938 2e-07 breast cancer 1_145790097 rs12405132 ENSG00000198483.12 ANKRD35 -95769 3.13e-11 0.26833 2e-07 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 5.53e-12 0.347938 6e-10 breast cancer 1_145790097 rs12405132 ENSG00000198483.12 ANKRD35 -95769 3.13e-11 0.26833 6e-10 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 5.53e-12 0.347938 8e-09 breast cancer 1_145790097 rs12405132 ENSG00000198483.12 ANKRD35 -95769 3.13e-11 0.26833 8e-09 breast cancer 1_149955122 rs12048493 ENSG00000178096.8 BOLA1 67205 0.000116522 -0.110393 4e-14 breast cancer 1_149955122 rs12048493 ENSG00000178096.8 BOLA1 67205 0.000116522 -0.110393 2e-09 breast cancer 1_149955122 rs12048493 ENSG00000178096.8 BOLA1 67205 0.000116522 -0.110393 9e-14 breast cancer 1_149955122 rs12048493 ENSG00000178096.8 BOLA1 67205 0.000116522 -0.110393 1e-09 breast cancer 1_155176305 rs4971059 ENSG00000169231.13 THBS3 -31676 4.42e-17 0.223708 5e-11 breast cancer 1_155176305 rs4971059 ENSG00000177628.15 GBA -68394 4.84e-05 0.0828992 5e-11 breast cancer 1_155176305 rs4971059 ENSG00000231064.7 THBS3-AS1 -18699 1.99e-05 0.172568 5e-11 breast cancer 1_155176305 rs4971059 ENSG00000185499.16 MUC1 -16611 1.25e-11 0.264584 5e-11 breast cancer 1_155176305 rs4971059 ENSG00000169231.13 THBS3 -31676 4.42e-17 0.223708 2e-10 breast cancer 1_155176305 rs4971059 ENSG00000177628.15 GBA -68394 4.84e-05 0.0828992 2e-10 breast cancer 1_155176305 rs4971059 ENSG00000231064.7 THBS3-AS1 -18699 1.99e-05 0.172568 2e-10 breast cancer 1_155176305 rs4971059 ENSG00000185499.16 MUC1 -16611 1.25e-11 0.264584 2e-10 breast cancer 1_155212052 rs2974935 ENSG00000236675.1 MTX1P1 -18923 0.000177972 0.107587 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000177628.15 GBA -32647 1.54e-12 0.128581 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000231064.7 THBS3-AS1 17048 2.37e-13 0.263913 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000169231.13 THBS3 4071 2.2e-43 0.316655 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000160766.14 GBAP1 -15370 1.07e-19 -0.316976 2e-07 breast cancer 1_155212052 rs2974935 ENSG00000173171.14 MTX1 3353 4.48e-05 0.0594499 2e-07 breast cancer 1_155212373 rs2075570 ENSG00000169231.13 THBS3 4392 4.8e-44 0.318176 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000143537.13 ADAM15 161807 0.000183745 -0.0987391 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000177628.15 GBA -32326 4.88e-12 0.125517 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000231064.7 THBS3-AS1 17369 3.64e-13 0.261435 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000160766.14 GBAP1 -15049 2.06e-20 -0.322142 5e-06 breast cancer 1_155212373 rs2075570 ENSG00000173171.14 MTX1 3674 3.32e-05 0.0603308 5e-06 breast cancer 1_155216951 rs1057941 ENSG00000185499.16 MUC1 24035 6.86e-09 0.211249 2e-07 breast cancer 1_155216951 rs1057941 ENSG00000231064.7 THBS3-AS1 21947 1.24e-07 0.197857 2e-07 breast cancer 1_155216951 rs1057941 ENSG00000160766.14 GBAP1 -10471 5.7e-09 -0.213174 2e-07 breast cancer 1_155216951 rs1057941 ENSG00000169231.13 THBS3 8970 1.81e-19 0.222202 2e-07 breast cancer 1_155302483 rs7524950 ENSG00000236675.1 MTX1P1 71508 2.63e-08 0.181784 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000185499.16 MUC1 109567 0.000250417 0.150129 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000143537.13 ADAM15 251917 8.1e-06 -0.134945 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000169231.13 THBS3 94502 1.83e-16 0.227328 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000231064.7 THBS3-AS1 107479 1.29e-05 0.182675 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000177628.15 GBA 57784 8.96e-27 0.217445 3e-09 breast cancer 1_155302483 rs7524950 ENSG00000132718.8 SYT11 -557026 3.44e-05 -0.126541 3e-09 breast cancer 1_155446537 rs10796944 ENSG00000169231.13 THBS3 238556 7.35e-09 0.175141 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000132718.8 SYT11 -412972 6.85e-05 -0.131613 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000143537.13 ADAM15 395971 2.27e-05 -0.138661 7e-10 breast cancer 1_155446537 rs10796944 ENSG00000177628.15 GBA 201838 1.93e-19 0.200669 7e-10 breast cancer 1_155587180 rs12091730 ENSG00000143537.13 ADAM15 536614 8.8e-06 -0.144944 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000132718.8 SYT11 -272329 4.41e-05 -0.134599 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000169231.13 THBS3 379199 4.16e-09 0.177422 2e-10 breast cancer 1_155587180 rs12091730 ENSG00000177628.15 GBA 342481 1e-19 0.201562 2e-10 breast cancer 1_155697170 rs348196 ENSG00000236675.1 MTX1P1 466195 1.05e-05 0.150364 2e-08 breast cancer 1_155697170 rs348196 ENSG00000143537.13 ADAM15 646604 0.000168888 -0.118523 2e-08 breast cancer 1_155697170 rs348196 ENSG00000169231.13 THBS3 489189 1.88e-08 0.163813 2e-08 breast cancer 1_155697170 rs348196 ENSG00000132718.8 SYT11 -162339 5.7e-07 -0.158293 2e-08 breast cancer 1_155697170 rs348196 ENSG00000177628.15 GBA 452471 7.97e-20 0.194799 2e-08 breast cancer 1_156183252 rs11264454 ENSG00000196189.12 SEMA4A 35886 2.65e-44 0.178729 7e-07 breast cancer 1_156183252 rs11264454 ENSG00000196189.12 SEMA4A 35886 2.65e-44 0.178729 2e-08 breast cancer 1_16013277 rs1763604 ENSG00000065526.10 SPEN 165413 0.000106822 -0.0665129 7e-09 breast cancer 1_172361919 rs1894633 ENSG00000135845.9 PIGC -82167 2.45e-11 0.278622 2e-06 breast cancer 1_200372918 rs6677545 ENSG00000203721.6 LINC00862 -27787 4.01e-09 0.131988 4e-08 breast cancer 1_202209914 rs17489300 ENSG00000243323.6 PTPRVP 41863 2.54e-05 -0.210935 2e-08 breast cancer 1_202209914 rs17489300 ENSG00000243323.6 PTPRVP 41863 2.54e-05 -0.210935 9e-10 breast cancer 1_202218048 rs6678914 ENSG00000133067.17 LGR6 24147 6.11e-05 0.0843215 1e-08 breast cancer 1_202218048 rs6678914 ENSG00000133067.17 LGR6 24147 6.11e-05 0.0843215 3e-12 breast cancer 1_204546897 rs2290854 ENSG00000198625.12 MDM4 30518 5.74e-11 -0.145511 1e-07 breast cancer 1_204549714 rs4245739 ENSG00000198625.12 MDM4 33335 1.79e-08 -0.131229 3e-23 breast cancer 1_204549714 rs4245739 ENSG00000198625.12 MDM4 33335 1.79e-08 -0.131229 8e-18 breast cancer 1_204549714 rs4245739 ENSG00000198625.12 MDM4 33335 1.79e-08 -0.131229 4e-06 breast cancer 1_204549714 rs4245739 ENSG00000198625.12 MDM4 33335 1.79e-08 -0.131229 2e-12 breast cancer 1_204549714 rs4245739 ENSG00000198625.12 MDM4 33335 1.79e-08 -0.131229 6e-15 breast cancer 1_40914768 rs4233486 ENSG00000179862.6 CITED4 52402 2.92e-06 -0.130911 2e-08 breast cancer 1_40914768 rs4233486 ENSG00000179862.6 CITED4 52402 2.92e-06 -0.130911 9e-09 breast cancer 1_45918469 rs12077974 ENSG00000117481.10 NSUN4 -421708 8.75e-08 -0.22038 2e-07 breast cancer 1_45918469 rs12077974 ENSG00000117480.15 FAAH -475796 2.15e-05 -0.157589 2e-07 breast cancer 1_45918469 rs12077974 ENSG00000234329.1 RPL7AP16 266643 1.25e-05 0.192112 2e-07 breast cancer 1_45918469 rs12077974 ENSG00000086015.20 MAST2 131482 3.89e-14 -0.196798 2e-07 breast cancer 1_46135245 rs1707302 ENSG00000280670.2 CCDC163 635193 0.000151431 -0.194599 3e-08 breast cancer 1_46135245 rs1707302 ENSG00000117480.15 FAAH -259020 1.88e-06 0.176902 3e-08 breast cancer 1_46135245 rs1707302 ENSG00000117461.14 PIK3R3 2209 8.65e-06 0.156128 3e-08 breast cancer 1_46135245 rs1707302 ENSG00000086015.20 MAST2 348258 3.2e-11 0.174091 3e-08 breast cancer 1_46135245 rs1707302 ENSG00000117481.10 NSUN4 -204932 4.54e-08 0.225729 3e-08 breast cancer 1_46135245 rs1707302 ENSG00000280670.2 CCDC163 635193 0.000151431 -0.194599 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000117480.15 FAAH -259020 1.88e-06 0.176902 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000117461.14 PIK3R3 2209 8.65e-06 0.156128 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000086015.20 MAST2 348258 3.2e-11 0.174091 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000117481.10 NSUN4 -204932 4.54e-08 0.225729 3e-10 breast cancer 1_8035440 rs225132 ENSG00000116288.12 PARK7 81149 5.43e-13 0.151875 3e-06 breast cancer 1_8326670 rs9628987; rs7535752 ENSG00000142599.17 RERE -490973 7.03e-09 -0.116003 5e-06 breast cancer 1_91555907 rs12134245 ENSG00000097046.12 CDC7 55014 4.53e-29 -0.262213 4e-06 breast cancer 10_121904429 rs7899628 ENSG00000107669.17 ATE1 -24372 3.12e-07 -0.111222 9e-10 breast cancer 10_121904429 rs7899628 ENSG00000107672.14 NSMCE4A -70788 3.37e-06 -0.0992778 9e-10 breast cancer 10_27080233 rs7918232 ENSG00000120539.14 MASTL -75034 1.7e-13 0.275918 8e-06 breast cancer 10_5630056 rs4414128; rs2386661; rs17141741 ENSG00000196372.12 ASB13 -36539 4.05e-08 -0.139718 5e-06 breast cancer 10_5752689 rs55910451 ENSG00000057608.16 GDI2 -89443 8.23e-36 -0.226773 4e-07 breast cancer 10_92172529 rs72807246 ENSG00000228701.1 TNKS2-DT 374238 4.53e-05 0.292793 3e-06 breast cancer 11_10299114 rs4345958 ENSG00000133812.15 SBF2 4907 4.2e-05 0.0742236 3e-06 breast cancer 11_10299114 rs4345958 ENSG00000254554.1 ADM-DT -4590 9.76e-05 0.14815 3e-06 breast cancer 11_111636465 rs505372 ENSG00000170145.4 SIK2 34074 5.83e-15 -0.175019 3e-06 breast cancer 11_111765903 rs643506 ENSG00000137713.15 PPP2R1B -524 1.36e-09 -0.174888 2e-07 breast cancer 11_117214494 rs77683187 ENSG00000149591.16 TAGLN 15173 3.8e-10 -0.482906 2e-06 breast cancer 11_18642694 rs10832963 ENSG00000151116.16 UEVLD 53947 1.57e-09 0.126414 9e-06 breast cancer 11_1871355 rs4980389 ENSG00000130595.17 TNNT3 -48207 1.1e-10 -0.202407 4e-07 breast cancer 11_1874478 rs4980386 ENSG00000130595.17 TNNT3 -45084 6.88e-11 -0.203215 9e-17 breast cancer 11_1877434 rs1973765 ENSG00000130595.17 TNNT3 -42128 6.16e-11 -0.197912 1e-37 breast cancer 11_1880867 rs4980383 ENSG00000130595.17 TNNT3 -38695 4.03e-05 0.132539 3e-06 breast cancer 11_1880867 rs4980383 ENSG00000130595.17 TNNT3 -38695 4.03e-05 0.132539 9e-09 breast cancer 11_1892909 rs576603 ENSG00000130595.17 TNNT3 -26653 9.65e-13 -0.221788 2e-08 breast cancer 11_1920716 rs909116 ENSG00000130595.17 TNNT3 1154 5.43e-06 -0.140967 7e-07 breast cancer 11_47325389 rs11039183 ENSG00000134575.9 ACP2 76483 6.15e-09 0.160688 6e-06 breast cancer 11_47325389 rs11039183 ENSG00000172247.3 C1QTNF4 -269270 0.000379404 0.157659 6e-06 breast cancer 11_65815595 rs3903072 ENSG00000172732.11 MUS81 -44467 1.22e-05 0.0948206 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 1.46e-10 0.11621 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172638.12 EFEMP2 -57997 8.97e-06 -0.109553 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172757.12 CFL1 -46351 9.04e-05 0.0447476 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 1.7e-05 -0.223493 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172732.11 MUS81 -44467 1.22e-05 0.0948206 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 1.46e-10 0.11621 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172638.12 EFEMP2 -57997 8.97e-06 -0.109553 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172757.12 CFL1 -46351 9.04e-05 0.0447476 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 1.7e-05 -0.223493 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172732.11 MUS81 -44467 1.22e-05 0.0948206 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 1.46e-10 0.11621 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172638.12 EFEMP2 -57997 8.97e-06 -0.109553 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172757.12 CFL1 -46351 9.04e-05 0.0447476 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 1.7e-05 -0.223493 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172732.11 MUS81 -44467 1.22e-05 0.0948206 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 1.46e-10 0.11621 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172638.12 EFEMP2 -57997 8.97e-06 -0.109553 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172757.12 CFL1 -46351 9.04e-05 0.0447476 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 1.7e-05 -0.223493 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172732.11 MUS81 -44467 1.22e-05 0.0948206 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 1.46e-10 0.11621 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172638.12 EFEMP2 -57997 8.97e-06 -0.109553 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172757.12 CFL1 -46351 9.04e-05 0.0447476 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 1.7e-05 -0.223493 6e-12 breast cancer 11_65935052 rs617791 ENSG00000175334.7 BANF1 -67125 6.57e-07 0.0688966 7e-06 breast cancer 11_65935052 rs617791 ENSG00000087365.15 SF3B2 -115677 2.54e-05 0.068064 7e-06 breast cancer 11_66301747 rs1783730 ENSG00000175115.11 PACS1 231293 9.76e-05 0.0580943 3e-07 breast cancer 11_66324772 rs118151305 ENSG00000172543.7 CTSW 444963 0.000138629 0.122643 6e-09 breast cancer 11_66843174 rs7570 ENSG00000173653.7 RCE1 -238 3.56e-06 -0.09965 8e-06 breast cancer 11_66843174 rs7570 ENSG00000173621.8 LRFN4 -13473 1.75e-20 -0.310194 8e-06 breast cancer 11_66843174 rs7570 ENSG00000174080.10 CTSF 274333 2.31e-31 0.290575 8e-06 breast cancer 11_803017 rs6597981 ENSG00000177685.16 CRACR2B -23127 9.12e-07 0.171325 3e-12 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 1.52e-40 0.495331 3e-12 breast cancer 11_803017 rs6597981 ENSG00000177595.17 PIDD1 -6629 2.6e-40 0.177507 3e-12 breast cancer 11_803017 rs6597981 ENSG00000177697.17 CD151 -29867 2.52e-12 0.25691 3e-12 breast cancer 11_803017 rs6597981 ENSG00000177666.16 PNPLA2 -15885 2.02e-05 -0.0778268 3e-12 breast cancer 11_803017 rs6597981 ENSG00000177685.16 CRACR2B -23127 9.12e-07 0.171325 1e-12 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 1.52e-40 0.495331 1e-12 breast cancer 11_803017 rs6597981 ENSG00000177595.17 PIDD1 -6629 2.6e-40 0.177507 1e-12 breast cancer 11_803017 rs6597981 ENSG00000177697.17 CD151 -29867 2.52e-12 0.25691 1e-12 breast cancer 11_803017 rs6597981 ENSG00000177666.16 PNPLA2 -15885 2.02e-05 -0.0778268 1e-12 breast cancer 12_111621753 rs11065979 ENSG00000111275.12 ALDH2 -145134 0.000406075 -0.09554 5e-06 breast cancer 12_120997672 rs2464195 ENSG00000157895.11 C12orf43 -18830 4.87e-06 -0.141693 3e-08 breast cancer 12_49251457 rs11168936 ENSG00000134287.9 ARF3 293906 0.000148059 -0.0611035 9e-07 breast cancer 13_95222702 rs1926657 ENSG00000125257.13 ABCC4 -78744 7.57e-08 0.186605 2e-06 breast cancer 14_67599772 rs7149859 ENSG00000100564.8 PIGH -515 8.51e-09 -0.188944 7e-07 breast cancer 15_48608389 rs1876206 ENSG00000166147.13 FBN1 -37460 4.16e-16 -0.395196 6e-06 breast cancer 15_49580388 rs8027730 ENSG00000156958.14 GALK2 424726 8.16e-09 0.167432 3e-08 breast cancer 15_50402109 rs4774565 ENSG00000244879.6 GABPB1-AS1 46700 5.5e-21 -0.353279 2e-06 breast cancer 15_51321455 rs1004983 ENSG00000186417.13 GLDN -20174 0.000202512 -0.124893 3e-06 breast cancer 15_74300521 rs12904134 ENSG00000140497.16 SCAMP2 -572844 1.81e-07 0.0792662 8e-06 breast cancer 15_74843920 rs6938 ENSG00000103653.16 CSK 61863 0.0001189 -0.0469178 9e-08 breast cancer 15_74843920 rs6938 ENSG00000178802.17 MPI -46085 2.91e-18 0.168353 9e-08 breast cancer 15_74843920 rs6938 ENSG00000140497.16 SCAMP2 -29445 7.23e-10 0.095546 9e-08 breast cancer 15_74843920 rs6938 ENSG00000140474.12 ULK3 723 1.1e-30 -0.175279 9e-08 breast cancer 15_74854991 rs1869959 ENSG00000140497.16 SCAMP2 -18374 2.26e-12 0.10706 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000178802.17 MPI -35014 1.02e-18 0.168501 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000140474.12 ULK3 11794 1.06e-40 -0.197307 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000213578.5 CPLX3 28444 0.000160466 0.169442 6e-08 breast cancer 15_74854991 rs1869959 ENSG00000140497.16 SCAMP2 -18374 2.26e-12 0.10706 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000178802.17 MPI -35014 1.02e-18 0.168501 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000140474.12 ULK3 11794 1.06e-40 -0.197307 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000213578.5 CPLX3 28444 0.000160466 0.169442 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000140497.16 SCAMP2 -18374 2.26e-12 0.10706 4e-07 breast cancer 15_74854991 rs1869959 ENSG00000178802.17 MPI -35014 1.02e-18 0.168501 4e-07 breast cancer 15_74854991 rs1869959 ENSG00000140474.12 ULK3 11794 1.06e-40 -0.197307 4e-07 breast cancer 15_74854991 rs1869959 ENSG00000213578.5 CPLX3 28444 0.000160466 0.169442 4e-07 breast cancer 15_75516399 rs8027365 ENSG00000169371.13 SNUPN -110070 1.06e-13 0.186925 1e-07 breast cancer 15_75516399 rs8027365 ENSG00000140400.16 MAN2C1 148245 3.51e-117 0.564797 1e-07 breast cancer 15_77977130 rs12906542 ENSG00000167202.11 TBC1D2B -100594 1.83e-14 -0.194087 7e-07 breast cancer 15_79777420 rs166870 ENSG00000136371.10 MTHFS -119959 2.12e-07 -0.0908651 3e-07 breast cancer 15_90965985 rs77554484 ENSG00000184056.14 VPS33B -56618 2.49e-11 -0.256724 1e-15 breast cancer 15_90965985 rs77554484 ENSG00000196547.14 MAN2A2 63767 2.86e-05 0.0930256 1e-15 breast cancer 15_90965985 rs77554484 ENSG00000166965.12 RCCD1 10189 2.36e-17 0.287473 1e-15 breast cancer 15_90968837 rs2290203 ENSG00000184056.14 VPS33B -53766 1.96e-10 -0.194459 4e-08 breast cancer 15_90968837 rs2290203 ENSG00000166965.12 RCCD1 13041 4.11e-06 0.126501 4e-08 breast cancer 15_90968837 rs2290203 ENSG00000258725.1 PRC1-AS1 -4023 3.23e-05 -0.223808 4e-08 breast cancer 15_90968837 rs2290203 ENSG00000184056.14 VPS33B -53766 1.96e-10 -0.194459 2e-19 breast cancer 15_90968837 rs2290203 ENSG00000166965.12 RCCD1 13041 4.11e-06 0.126501 2e-19 breast cancer 15_90968837 rs2290203 ENSG00000258725.1 PRC1-AS1 -4023 3.23e-05 -0.223808 2e-19 breast cancer 15_90968837 rs2290203 ENSG00000184056.14 VPS33B -53766 1.96e-10 -0.194459 8e-10 breast cancer 15_90968837 rs2290203 ENSG00000166965.12 RCCD1 13041 4.11e-06 0.126501 8e-10 breast cancer 15_90968837 rs2290203 ENSG00000258725.1 PRC1-AS1 -4023 3.23e-05 -0.223808 8e-10 breast cancer 16_4056787 rs11076805 ENSG00000162104.9 ADCY9 -59398 1.07e-08 -0.153667 1e-08 breast cancer 16_4056787 rs11076805 ENSG00000162104.9 ADCY9 -59398 1.07e-08 -0.153667 2e-08 breast cancer 16_56387075 rs2432539 ENSG00000087263.16 OGFOD1 -64415 2.54e-08 -0.1369 3e-10 breast cancer 16_56387075 rs2432539 ENSG00000125124.11 BBS2 -133208 2.84e-36 -0.417749 3e-10 breast cancer 16_56387075 rs2432539 ENSG00000087263.16 OGFOD1 -64415 2.54e-08 -0.1369 4e-08 breast cancer 16_56387075 rs2432539 ENSG00000125124.11 BBS2 -133208 2.84e-36 -0.417749 4e-08 breast cancer 16_56497273 rs2303282 ENSG00000125124.11 BBS2 -23010 8.54e-37 -0.427919 3e-07 breast cancer 16_56497273 rs2303282 ENSG00000087263.16 OGFOD1 45783 7.18e-09 -0.144573 3e-07 breast cancer 17_2195889 rs16952006 ENSG00000167720.12 SRR -107494 4.83e-06 -0.335951 3e-06 breast cancer 17_2195889 rs16952006 ENSG00000108963.17 DPH1 165779 2.78e-05 0.1305 3e-06 breast cancer 17_30560116 rs111780165 ENSG00000250462.8 LRRC37BP1 -69564 0.000191489 0.258404 8e-08 breast cancer 17_30689342 rs8081187 ENSG00000250462.8 LRRC37BP1 59662 0.000301609 0.22333 2e-07 breast cancer 17_30884649 rs7223535 ENSG00000176390.11 CRLF3 59873 9.53e-06 0.0617423 4e-10 breast cancer 17_30887862 rs113934718 ENSG00000176390.11 CRLF3 63086 1.01e-05 0.0621174 1e-08 breast cancer 17_30894259 rs62070652 ENSG00000176390.11 CRLF3 69483 1.01e-05 0.0621174 6e-09 breast cancer 17_30894259 rs62070652 ENSG00000176390.11 CRLF3 69483 1.01e-05 0.0621174 1e-06 breast cancer 17_45394123 rs4763 ENSG00000214401.4 KANSL1-AS1 -799453 1.54e-79 1.10813 2e-08 breast cancer 17_45394123 rs4763 ENSG00000214425.7 LRRC37A4P -156212 4.02e-101 -1.06409 2e-08 breast cancer 17_45394123 rs4763 ENSG00000262500.1 MAPK8IP1P1 -849483 6.3e-76 0.98931 2e-08 breast cancer 17_45394123 rs4763 ENSG00000204650.14 LINC02210 -226205 1.75e-65 0.524154 2e-08 breast cancer 17_45394123 rs4763 ENSG00000120071.13 KANSL1 -831266 3.79e-07 0.180522 2e-08 breast cancer 17_45394123 rs4763 ENSG00000176681.14 LRRC37A -898610 2.08e-11 0.438028 2e-08 breast cancer 17_45394123 rs4763 ENSG00000264070.1 DND1P1 -191748 7.49e-70 1.15964 2e-08 breast cancer 17_45394123 rs4763 ENSG00000263503.1 MAPK8IP1P2 -208217 4.79e-86 1.10238 2e-08 breast cancer 17_45941122 rs62061734 ENSG00000238083.7 LRRC37A2 -570389 2.68e-54 0.802601 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000120071.13 KANSL1 -284267 7.09e-09 0.189641 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214425.7 LRRC37A4P 390787 6.42e-163 -1.13537 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000176681.14 LRRC37A -351611 7.36e-15 0.467201 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000185829.17 ARL17A -638560 8.16e-05 0.240595 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000264070.1 DND1P1 355251 1.23e-102 1.2344 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000204650.14 LINC02210 320794 2.55e-89 0.545306 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214401.4 KANSL1-AS1 -252454 7.34e-126 1.19835 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000225190.10 PLEKHM1 450373 0.000262082 -0.0551512 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000228696.8 ARL17B -420675 1.98e-05 -0.287991 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000263503.1 MAPK8IP1P2 338782 8.52e-127 1.16061 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000262500.1 MAPK8IP1P1 -302484 1.43e-111 1.0483 8e-12 breast cancer 17_46751565 rs199533 ENSG00000176681.14 LRRC37A 458832 5.39e-13 0.436967 5e-08 breast cancer 17_46751565 rs199533 ENSG00000228696.8 ARL17B 389768 0.000280243 -0.24688 5e-08 breast cancer 17_46751565 rs199533 ENSG00000120071.13 KANSL1 526176 1.59e-12 0.231048 5e-08 breast cancer 17_46751565 rs199533 ENSG00000238083.7 LRRC37A2 240054 6.07e-52 0.791473 5e-08 breast cancer 17_46751565 rs199533 ENSG00000214401.4 KANSL1-AS1 557989 3.33e-150 1.26711 5e-08 breast cancer 17_46751565 rs199533 ENSG00000185829.17 ARL17A 171883 1.69e-06 0.292844 5e-08 breast cancer 17_46751565 rs199533 ENSG00000262500.1 MAPK8IP1P1 507959 2.1e-126 1.09546 5e-08 breast cancer 17_46788237 rs199498 ENSG00000185829.17 ARL17A 208555 3.79e-05 0.243635 2e-08 breast cancer 17_46788237 rs199498 ENSG00000214401.4 KANSL1-AS1 594661 4.28e-87 1.02666 2e-08 breast cancer 17_46788237 rs199498 ENSG00000108379.9 WNT3 -44821 7.49e-06 0.249689 2e-08 breast cancer 17_46788237 rs199498 ENSG00000120071.13 KANSL1 562848 9.69e-09 0.182131 2e-08 breast cancer 17_46788237 rs199498 ENSG00000262500.1 MAPK8IP1P1 544631 6.26e-80 0.903788 2e-08 breast cancer 17_46788237 rs199498 ENSG00000238083.7 LRRC37A2 276726 5.7e-37 0.656896 2e-08 breast cancer 17_46788237 rs199498 ENSG00000176681.14 LRRC37A 495504 4.37e-14 0.440025 2e-08 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 6.69e-05 -0.146508 8e-09 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 6.69e-05 -0.146508 5e-12 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 6.69e-05 -0.146508 1e-08 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 6.69e-05 -0.146508 2e-13 breast cancer 17_55132413 rs2787486 ENSG00000166263.13 STXBP4 163627 0.000126814 -0.136846 2e-34 breast cancer 17_55132413 rs2787486 ENSG00000166263.13 STXBP4 163627 0.000126814 -0.136846 6e-29 breast cancer 17_55135212 rs2628317 ENSG00000166263.13 STXBP4 166426 5.7e-05 -0.156198 4e-16 breast cancer 17_81211408 rs9913021 ENSG00000224877.3 NDUFAF8 -27831 4.09e-05 0.110624 2e-06 breast cancer 17_82597601 rs62079673 ENSG00000141580.15 WDR45B -50952 1.34e-05 0.0672318 1e-06 breast cancer 17_82946434 rs898097 ENSG00000141560.14 FN3KRP 229751 2.07e-28 -0.262561 2e-06 breast cancer 17_82946434 rs898097 ENSG00000167363.13 FN3K 210859 1.17e-06 -0.120523 2e-06 breast cancer 17_82946434 rs898097 ENSG00000141556.20 TBCD 194370 3.35e-06 -0.101027 2e-06 breast cancer 18_23047728 rs9675999 ENSG00000101773.18 RBBP8 249467 1.02e-05 -0.112478 7e-07 breast cancer 19_11313027 rs322144 ENSG00000183401.11 CCDC159 -31657 1.64e-05 0.0824434 7e-09 breast cancer 19_11313027 rs322144 ENSG00000130158.13 DOCK6 50575 2.1e-06 0.193112 7e-09 breast cancer 19_11313027 rs322144 ENSG00000105520.10 PLPPR2 -42359 3.86e-08 0.0855353 7e-09 breast cancer 19_11313027 rs322144 ENSG00000105518.13 TMEM205 -33455 3.22e-05 0.0851236 7e-09 breast cancer 19_11313027 rs322144 ENSG00000187266.13 EPOR -71285 6.31e-06 0.127616 7e-09 breast cancer 19_12846836 rs117758012 ENSG00000197857.13 ZNF44 551949 0.000168638 -0.270567 5e-07 breast cancer 19_13843757 rs2594714 ENSG00000037757.13 MRI1 79225 2.62e-06 0.152016 4e-10 breast cancer 19_13843757 rs2594714 ENSG00000037757.13 MRI1 79225 2.62e-06 0.152016 1e-08 breast cancer 19_17099805 rs7249698 ENSG00000131351.14 HAUS8 24180 2.19e-05 -0.147159 4e-07 breast cancer 19_17099805 rs7249698 ENSG00000099331.13 MYO9B 24024 4.2e-07 -0.0784715 4e-07 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 6.96e-17 0.257759 9e-13 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 4.91e-13 -0.193005 9e-13 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 6.96e-17 0.257759 2e-06 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 4.91e-13 -0.193005 2e-06 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 6.96e-17 0.257759 2e-09 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 4.91e-13 -0.193005 2e-09 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 6.96e-17 0.257759 1e-12 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 4.91e-13 -0.193005 1e-12 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 6.96e-17 0.257759 4e-13 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 4.91e-13 -0.193005 4e-13 breast cancer 19_17278895 rs8170 ENSG00000099330.8 OCEL1 52691 6.96e-17 0.257759 7e-21 breast cancer 19_17278895 rs8170 ENSG00000130312.6 MRPL34 -13937 4.91e-13 -0.193005 7e-21 breast cancer 19_17279482 rs4808075 ENSG00000099330.8 OCEL1 53278 5.83e-10 0.170335 2e-09 breast cancer 19_17279482 rs4808075 ENSG00000099330.8 OCEL1 53278 5.83e-10 0.170335 4e-07 breast cancer 19_17282085 rs8100241 ENSG00000130312.6 MRPL34 -10747 8.52e-07 0.104031 4e-08 breast cancer 19_17282085 rs8100241 ENSG00000099330.8 OCEL1 55881 1.3e-11 -0.165106 4e-08 breast cancer 19_17283116 rs56069439 ENSG00000099330.8 OCEL1 56912 8.45e-10 0.168987 9e-09 breast cancer 19_17283116 rs56069439 ENSG00000099330.8 OCEL1 56912 8.45e-10 0.168987 8e-19 breast cancer 19_17283116 rs56069439 ENSG00000099330.8 OCEL1 56912 8.45e-10 0.168987 1e-32 breast cancer 19_17283315 rs2363956 ENSG00000099330.8 OCEL1 57111 7.51e-12 -0.166935 2e-08 breast cancer 19_17283315 rs2363956 ENSG00000130312.6 MRPL34 -9517 3.9e-07 0.107142 2e-08 breast cancer 19_17283315 rs2363956 ENSG00000099330.8 OCEL1 57111 7.51e-12 -0.166935 2e-06 breast cancer 19_17283315 rs2363956 ENSG00000130312.6 MRPL34 -9517 3.9e-07 0.107142 2e-06 breast cancer 19_17290595 rs67397200 ENSG00000099330.8 OCEL1 64391 3.67e-10 0.171019 2e-08 breast cancer 19_17290595 rs67397200 ENSG00000099330.8 OCEL1 64391 3.67e-10 0.171019 3e-17 breast cancer 19_17290595 rs67397200 ENSG00000099330.8 OCEL1 64391 3.67e-10 0.171019 3e-37 breast cancer 19_18422832 rs7258465 ENSG00000175489.9 LRRC25 25215 5.51e-25 -0.198588 3e-28 breast cancer 19_18422832 rs7258465 ENSG00000105656.12 ELL -99295 6.65e-29 0.187263 3e-28 breast cancer 19_18422832 rs7258465 ENSG00000130511.15 SSBP4 3968 8.86e-06 -0.0552723 3e-28 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 6.68e-32 0.196807 4e-15 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 1.65e-26 -0.205001 4e-15 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 6.68e-32 0.196807 5e-28 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 1.65e-26 -0.205001 5e-28 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 6.68e-32 0.196807 6e-14 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 1.65e-26 -0.205001 6e-14 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 6.68e-32 0.196807 6e-06 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 1.65e-26 -0.205001 6e-06 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 6.68e-32 0.196807 5e-15 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 1.65e-26 -0.205001 5e-15 breast cancer 19_18460331 rs4808801 ENSG00000105656.12 ELL -61796 6.68e-32 0.196807 2e-31 breast cancer 19_18460331 rs4808801 ENSG00000175489.9 LRRC25 62714 1.65e-26 -0.205001 2e-31 breast cancer 19_18522945 rs172032 ENSG00000105656.12 ELL 818 1.72e-32 0.18645 1e-16 breast cancer 19_18522945 rs172032 ENSG00000130517.13 PGPEP1 182358 7.28e-06 -0.108109 1e-16 breast cancer 19_18522945 rs172032 ENSG00000130513.6 GDF15 148214 1.1e-05 -0.157183 1e-16 breast cancer 19_18522945 rs172032 ENSG00000175489.9 LRRC25 125328 6.55e-22 -0.17534 1e-16 breast cancer 19_19417997 rs1469713 ENSG00000167491.17 GATAD2A 32171 6.39e-30 0.19975 1e-10 breast cancer 19_19417997 rs1469713 ENSG00000186010.18 NDUFA13 -97739 4.48e-05 0.0493222 1e-10 breast cancer 19_19417997 rs1469713 ENSG00000178093.13 TSSK6 -97688 6.43e-08 0.159818 1e-10 breast cancer 19_19417997 rs1469713 ENSG00000064547.13 LPAR2 -210933 1.06e-12 -0.119375 1e-10 breast cancer 19_19417997 rs1469713 ENSG00000129933.20 MAU2 97152 8.18e-09 -0.0782976 1e-10 breast cancer 19_19434887 rs2965183 ENSG00000186010.18 NDUFA13 -80849 4.48e-05 0.0493222 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000178093.13 TSSK6 -80798 6.43e-08 0.159818 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000167491.17 GATAD2A 49061 6.39e-30 0.19975 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000064547.13 LPAR2 -194043 1.06e-12 -0.119375 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000129933.20 MAU2 114042 8.18e-09 -0.0782976 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000186010.18 NDUFA13 -80849 4.48e-05 0.0493222 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000178093.13 TSSK6 -80798 6.43e-08 0.159818 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000167491.17 GATAD2A 49061 6.39e-30 0.19975 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000064547.13 LPAR2 -194043 1.06e-12 -0.119375 6e-12 breast cancer 19_19434887 rs2965183 ENSG00000129933.20 MAU2 114042 8.18e-09 -0.0782976 6e-12 breast cancer 19_19535463 rs2304098 ENSG00000129933.20 MAU2 214618 1.8e-08 -0.0763352 2e-11 breast cancer 19_19535463 rs2304098 ENSG00000167491.17 GATAD2A 149637 1.48e-29 0.198106 2e-11 breast cancer 19_19535463 rs2304098 ENSG00000186010.18 NDUFA13 19727 2.07e-05 0.051288 2e-11 breast cancer 19_19535463 rs2304098 ENSG00000178093.13 TSSK6 19778 1.44e-07 0.155222 2e-11 breast cancer 19_19535463 rs2304098 ENSG00000064547.13 LPAR2 -93467 1.96e-12 -0.117716 2e-11 breast cancer 19_43779080 rs1685191 ENSG00000104783.11 KCNN4 -2177 1.55e-33 -0.365964 4e-20 breast cancer 19_43779080 rs1685191 ENSG00000204920.10 ZNF155 -188782 1.51e-06 -0.174155 4e-20 breast cancer 19_43782361 rs3760982 ENSG00000167637.16 ZNF283 -44931 1.25e-05 0.130684 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.55e-09 -0.214992 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000104783.11 KCNN4 1104 5.48e-35 -0.368938 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000167637.16 ZNF283 -44931 1.25e-05 0.130684 8e-09 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.55e-09 -0.214992 8e-09 breast cancer 19_43782361 rs3760982 ENSG00000104783.11 KCNN4 1104 5.48e-35 -0.368938 8e-09 breast cancer 19_43782361 rs3760982 ENSG00000167637.16 ZNF283 -44931 1.25e-05 0.130684 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.55e-09 -0.214992 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000104783.11 KCNN4 1104 5.48e-35 -0.368938 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000167637.16 ZNF283 -44931 1.25e-05 0.130684 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.55e-09 -0.214992 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000104783.11 KCNN4 1104 5.48e-35 -0.368938 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000167637.16 ZNF283 -44931 1.25e-05 0.130684 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.55e-09 -0.214992 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000104783.11 KCNN4 1104 5.48e-35 -0.368938 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000167637.16 ZNF283 -44931 1.25e-05 0.130684 1e-16 breast cancer 19_43782361 rs3760982 ENSG00000204920.10 ZNF155 -185501 1.55e-09 -0.214992 1e-16 breast cancer 19_43782361 rs3760982 ENSG00000104783.11 KCNN4 1104 5.48e-35 -0.368938 1e-16 breast cancer 19_43919418 rs375066 ENSG00000104783.11 KCNN4 138161 1.24e-31 -0.355298 2e-14 breast cancer 19_43919418 rs375066 ENSG00000204920.10 ZNF155 -48444 2.38e-13 -0.261358 2e-14 breast cancer 19_43919418 rs375066 ENSG00000167637.16 ZNF283 92126 1.46e-07 0.158146 2e-14 breast cancer 19_51869723 rs10411161 ENSG00000198093.10 ZNF649 -35317 7.31e-05 -0.216364 7e-06 breast cancer 19_51869723 rs10411161 ENSG00000161551.14 ZNF577 -18253 2.23e-08 -0.304243 7e-06 breast cancer 2_200878871 rs115635831 ENSG00000064012.21 CASP8 -354572 2.07e-05 0.308202 1e-06 breast cancer 2_201003582 rs112257290 ENSG00000064012.21 CASP8 -229861 1.84e-07 -0.229718 2e-07 breast cancer 2_201071148 rs114962751 ENSG00000064012.21 CASP8 -162295 2.02e-05 0.308569 7e-08 breast cancer 2_201258707 rs3769821 ENSG00000064012.21 CASP8 25264 3.34e-34 0.228006 4e-18 breast cancer 2_201258707 rs3769821 ENSG00000155749.12 FLACC1 -98691 4.62e-07 -0.192485 4e-18 breast cancer 2_201279205 rs10931936 ENSG00000064012.21 CASP8 45762 1.02e-44 0.275814 6e-06 breast cancer 2_201279205 rs10931936 ENSG00000240344.8 PPIL3 389902 1.49e-05 -0.163064 6e-06 breast cancer 2_201288355 rs1035142 ENSG00000064012.21 CASP8 54912 4.24e-60 0.281452 3e-09 breast cancer 2_201288355 rs1035142 ENSG00000155749.12 FLACC1 -69043 5.9e-12 -0.251145 3e-09 breast cancer 2_201288502 rs700635 ENSG00000155749.12 FLACC1 -68896 0.000193265 -0.15318 5e-16 breast cancer 2_201288502 rs700635 ENSG00000240344.8 PPIL3 399199 2.39e-05 -0.159097 5e-16 breast cancer 2_201288502 rs700635 ENSG00000064012.21 CASP8 55059 2.59e-44 0.27458 5e-16 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 7.5e-44 0.272892 2e-16 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 0.000173804 -0.154025 2e-16 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 2.8e-05 -0.157524 2e-16 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 7.5e-44 0.272892 7e-07 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 0.000173804 -0.154025 7e-07 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 2.8e-05 -0.157524 7e-07 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 7.5e-44 0.272892 9e-14 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 0.000173804 -0.154025 9e-14 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 2.8e-05 -0.157524 9e-14 breast cancer 2_201316524 rs1830298 ENSG00000064012.21 CASP8 83081 7.5e-44 0.272892 6e-24 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 0.000173804 -0.154025 6e-24 breast cancer 2_201316524 rs1830298 ENSG00000240344.8 PPIL3 427221 2.8e-05 -0.157524 6e-24 breast cancer 2_201384985 rs2714486 ENSG00000064012.21 CASP8 151542 2.04e-17 -0.208958 7e-10 breast cancer 2_201502866 rs77688320 ENSG00000064012.21 CASP8 269423 1.69e-13 -0.195694 3e-09 breast cancer 2_201666541 rs62193398 ENSG00000003393.14 ALS2 -114648 6.43e-08 0.185721 1e-07 breast cancer 2_201666541 rs62193398 ENSG00000155755.18 TMEM237 22971 9.74e-12 0.287787 1e-07 breast cancer 2_201666541 rs62193398 ENSG00000064012.21 CASP8 433098 0.000197489 -0.0758163 1e-07 breast cancer 2_24748307 rs6710503 ENSG00000138031.14 ADCY3 -171532 3.43e-06 -0.241488 5e-06 breast cancer 2_24748307 rs6710503 ENSG00000138092.10 CENPO -45076 0.000146578 -0.17779 5e-06 breast cancer 2_24906604 rs6725517 ENSG00000115137.11 DNAJC27 -65490 9.99e-34 0.395182 3e-12 breast cancer 2_24906604 rs6725517 ENSG00000138092.10 CENPO 113221 5.56e-51 0.569167 3e-12 breast cancer 2_24906604 rs6725517 ENSG00000184924.5 PTRHD1 113469 2.42e-06 0.10113 3e-12 breast cancer 2_24906604 rs6725517 ENSG00000138031.14 ADCY3 -13235 4.16e-84 0.774085 3e-12 breast cancer 2_24906604 rs6725517 ENSG00000115137.11 DNAJC27 -65490 9.99e-34 0.395182 5e-11 breast cancer 2_24906604 rs6725517 ENSG00000138092.10 CENPO 113221 5.56e-51 0.569167 5e-11 breast cancer 2_24906604 rs6725517 ENSG00000184924.5 PTRHD1 113469 2.42e-06 0.10113 5e-11 breast cancer 2_24906604 rs6725517 ENSG00000138031.14 ADCY3 -13235 4.16e-84 0.774085 5e-11 breast cancer 2_25068670 rs1971136 ENSG00000138031.14 ADCY3 148831 1.93e-52 -0.642147 5e-09 breast cancer 2_25068670 rs1971136 ENSG00000184924.5 PTRHD1 275535 4.4e-05 -0.0878875 5e-09 breast cancer 2_25068670 rs1971136 ENSG00000138092.10 CENPO 275287 7.67e-34 -0.474358 5e-09 breast cancer 2_25068670 rs1971136 ENSG00000115137.11 DNAJC27 96576 2.17e-23 -0.331789 5e-09 breast cancer 2_25222417 rs113953597 ENSG00000138031.14 ADCY3 302578 8.09e-05 -0.201568 1e-08 breast cancer 2_28896719 rs67073037 ENSG00000213639.9 PPP1CB 145079 2.93e-06 -0.0759321 5e-09 breast cancer 2_28896719 rs67073037 ENSG00000171103.10 TRMT61B 26418 6.17e-05 0.14853 5e-09 breast cancer 2_28896719 rs67073037 ENSG00000213639.9 PPP1CB 145079 2.93e-06 -0.0759321 3e-06 breast cancer 2_28896719 rs67073037 ENSG00000171103.10 TRMT61B 26418 6.17e-05 0.14853 3e-06 breast cancer 2_28897867 rs4577244 ENSG00000213639.9 PPP1CB 146227 2.03e-06 -0.0766806 2e-09 breast cancer 2_28897867 rs4577244 ENSG00000171103.10 TRMT61B 27566 5.18e-05 0.149151 2e-09 breast cancer 2_38150263 rs184577 ENSG00000232973.11 CYP1B1-AS1 76816 1.72e-05 -0.115565 4e-06 breast cancer 2_69164996 rs4602255 ENSG00000198380.12 GFPT1 -222258 3.58e-05 0.076759 2e-09 breast cancer 2_69900097 rs6716937 ENSG00000087338.4 GMCL1 70455 2.37e-11 0.102469 4e-07 breast cancer 2_69900097 rs6716937 ENSG00000196975.15 ANXA4 255672 5.63e-07 -0.118837 4e-07 breast cancer 20_37635373 rs73107564 ENSG00000101347.8 SAMHD1 683530 0.000177372 -0.0693641 2e-07 breast cancer 20_50329374 rs6122906 ENSG00000203999.8 LINC01270 36654 9.2e-06 -0.123367 4e-11 breast cancer 20_50329374 rs6122906 ENSG00000203999.8 LINC01270 36654 9.2e-06 -0.123367 3e-10 breast cancer 20_50346469 rs6020465 ENSG00000203999.8 LINC01270 53749 3.97e-06 -0.130567 5e-07 breast cancer 21_46360308 rs9808759 ENSG00000160285.14 LSS 131484 1.92e-08 0.301217 6e-09 breast cancer 21_46360308 rs9808759 ENSG00000160310.17 PRMT2 -274859 1.26e-05 -0.178857 6e-09 breast cancer 21_46360308 rs9808759 ENSG00000182362.13 YBEY 73971 4.6e-21 -0.74825 6e-09 breast cancer 21_46360308 rs9808759 ENSG00000160285.14 LSS 131484 1.92e-08 0.301217 4e-07 breast cancer 21_46360308 rs9808759 ENSG00000160310.17 PRMT2 -274859 1.26e-05 -0.178857 4e-07 breast cancer 21_46360308 rs9808759 ENSG00000182362.13 YBEY 73971 4.6e-21 -0.74825 4e-07 breast cancer 22_38172826 rs738321 ENSG00000184381.18 PLA2G6 -32864 1.05e-05 0.098866 1e-13 breast cancer 22_38172826 rs738321 ENSG00000184381.18 PLA2G6 -32864 1.05e-05 0.098866 7e-14 breast cancer 22_38174306 rs4820318 ENSG00000184381.18 PLA2G6 -31384 1.09e-05 0.0991439 1e-13 breast cancer 22_38962032 rs12628403 ENSG00000183741.11 CBX6 89718 6.46e-25 -0.525435 9e-14 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 3.97e-18 -0.848515 9e-14 breast cancer 22_38962032 rs12628403 ENSG00000128383.12 APOBEC3A 9291 6.31e-53 -0.495204 9e-14 breast cancer 22_38962032 rs12628403 ENSG00000183741.11 CBX6 89718 6.46e-25 -0.525435 3e-17 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 3.97e-18 -0.848515 3e-17 breast cancer 22_38962032 rs12628403 ENSG00000128383.12 APOBEC3A 9291 6.31e-53 -0.495204 3e-17 breast cancer 22_38962032 rs12628403 ENSG00000183741.11 CBX6 89718 6.46e-25 -0.525435 4e-06 breast cancer 22_38962032 rs12628403 ENSG00000179750.15 APOBEC3B -20315 3.97e-18 -0.848515 4e-06 breast cancer 22_38962032 rs12628403 ENSG00000128383.12 APOBEC3A 9291 6.31e-53 -0.495204 4e-06 breast cancer 22_42745087 rs4820477 ENSG00000128274.15 A4GALT 23789 2.76e-29 -0.37131 9e-07 breast cancer 22_43072659 rs28599928 ENSG00000100266.18 PACSIN2 57514 6.99e-05 0.10768 2e-06 breast cancer 3_100105841 rs9837602 ENSG00000181458.10 TMEM45A -386778 0.000237542 0.173132 1e-09 breast cancer 3_105145487 rs9862599 ENSG00000170017.12 ALCAM -221422 0.000181208 -0.165573 1e-08 breast cancer 3_141547651 rs6776003 ENSG00000177311.11 ZBTB38 223438 2.77e-05 0.0800711 3e-10 breast cancer 3_150750021 rs6788895 ENSG00000181788.3 SIAH2 -13456 8.75e-07 0.230079 2e-06 breast cancer 3_150750021 rs6788895 ENSG00000181788.3 SIAH2 -13456 8.75e-07 0.230079 9e-08 breast cancer 3_156645453 rs2136690 ENSG00000240875.5 LINC00886 -171609 4.91e-08 -0.232313 4e-06 breast cancer 3_156927968 rs7637701 ENSG00000240875.5 LINC00886 110906 8.76e-18 -0.363236 1e-06 breast cancer 3_49129027 rs61729152 ENSG00000172037.13 LAMB2 -4091 2.63e-06 0.564476 6e-06 breast cancer 3_49129027 rs61729152 ENSG00000182179.12 UBA7 -684919 2.18e-06 0.345548 6e-06 breast cancer 3_63956021 rs3821902 ENSG00000239653.1 PSMD6-AS2 -48001 9.77e-06 0.139918 3e-12 breast cancer 3_63956021 rs3821902 ENSG00000163634.11 THOC7 92118 4.01e-05 0.106765 3e-12 breast cancer 3_63982224 rs1053338 ENSG00000163634.11 THOC7 118321 3.45e-05 0.107245 7e-10 breast cancer 3_63982224 rs1053338 ENSG00000239653.1 PSMD6-AS2 -21798 4.41e-05 0.128911 7e-10 breast cancer 3_63982224 rs1053338 ENSG00000163634.11 THOC7 118321 3.45e-05 0.107245 5e-11 breast cancer 3_63982224 rs1053338 ENSG00000239653.1 PSMD6-AS2 -21798 4.41e-05 0.128911 5e-11 breast cancer 3_63982224 rs1053338 ENSG00000163634.11 THOC7 118321 3.45e-05 0.107245 9e-09 breast cancer 3_63982224 rs1053338 ENSG00000239653.1 PSMD6-AS2 -21798 4.41e-05 0.128911 9e-09 breast cancer 3_63982224 rs1053338 ENSG00000163634.11 THOC7 118321 3.45e-05 0.107245 2e-07 breast cancer 3_63982224 rs1053338 ENSG00000239653.1 PSMD6-AS2 -21798 4.41e-05 0.128911 2e-07 breast cancer 3_64074452 rs1450985 ENSG00000239653.1 PSMD6-AS2 70430 9.71e-05 0.0842689 6e-08 breast cancer 4_17386536 rs77485526 ENSG00000151552.11 QDPR -125698 3.7e-05 -0.320423 2e-06 breast cancer 4_38814717 rs6815814 ENSG00000197712.11 FAM114A1 -52960 2.46e-06 0.168487 6e-13 breast cancer 4_38814717 rs6815814 ENSG00000197712.11 FAM114A1 -52960 2.46e-06 0.168487 1e-11 breast cancer 5_10467590 rs1092913 ENSG00000145495.15 MARCHF6 113887 1.48e-05 -0.109578 2e-06 breast cancer 5_128098106 rs1112956 ENSG00000245937.7 SLC12A2-DT 14934 1.88e-13 0.205423 9e-06 breast cancer 5_128227188 rs36715 ENSG00000245937.7 SLC12A2-DT 144016 4.03e-09 0.148444 4e-06 breast cancer 5_132304843 rs6860806 ENSG00000197375.12 SLC22A5 -64909 4.87e-20 -0.34347 3e-08 breast cancer 5_132304843 rs6860806 ENSG00000197208.5 SLC22A4 10400 1.11e-06 -0.0742955 3e-08 breast cancer 5_132304843 rs6860806 ENSG00000197375.12 SLC22A5 -64909 4.87e-20 -0.34347 8e-08 breast cancer 5_132304843 rs6860806 ENSG00000197208.5 SLC22A4 10400 1.11e-06 -0.0742955 8e-08 breast cancer 5_132466255 rs2522057 ENSG00000239642.5 MEIKIN 520557 5.27e-06 0.217396 9e-08 breast cancer 5_132466255 rs2522057 ENSG00000164398.12 ACSL6 454012 4.36e-05 0.0767928 9e-08 breast cancer 5_132466255 rs2522057 ENSG00000197536.11 IRF1-AS1 55619 3.71e-05 -0.0853599 9e-08 breast cancer 5_132466255 rs2522057 ENSG00000197375.12 SLC22A5 96503 3.36e-20 0.346782 9e-08 breast cancer 5_132466255 rs2522057 ENSG00000197208.5 SLC22A4 171812 1.91e-05 0.0657343 9e-08 breast cancer 5_132466255 rs2522057 ENSG00000164403.14 SHROOM1 -364643 3.4e-05 -0.148403 9e-08 breast cancer 5_132466255 rs2522057 ENSG00000239642.5 MEIKIN 520557 5.27e-06 0.217396 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000164398.12 ACSL6 454012 4.36e-05 0.0767928 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000197536.11 IRF1-AS1 55619 3.71e-05 -0.0853599 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000197375.12 SLC22A5 96503 3.36e-20 0.346782 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000197208.5 SLC22A4 171812 1.91e-05 0.0657343 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000164403.14 SHROOM1 -364643 3.4e-05 -0.148403 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000239642.5 MEIKIN 520557 5.27e-06 0.217396 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000164398.12 ACSL6 454012 4.36e-05 0.0767928 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000197536.11 IRF1-AS1 55619 3.71e-05 -0.0853599 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000197375.12 SLC22A5 96503 3.36e-20 0.346782 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000197208.5 SLC22A4 171812 1.91e-05 0.0657343 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000164403.14 SHROOM1 -364643 3.4e-05 -0.148403 3e-07 breast cancer 5_132497907 rs736801 ENSG00000164398.12 ACSL6 485664 0.000313215 -0.0693245 8e-08 breast cancer 5_132497907 rs736801 ENSG00000239642.5 MEIKIN 552209 2.33e-05 -0.206689 8e-08 breast cancer 5_132497907 rs736801 ENSG00000197375.12 SLC22A5 128155 1.96e-15 -0.308579 8e-08 breast cancer 5_132497907 rs736801 ENSG00000164403.14 SHROOM1 -332991 8.16e-05 0.144292 8e-08 breast cancer 5_132497907 rs736801 ENSG00000197536.11 IRF1-AS1 87271 5.6e-06 0.0959131 8e-08 breast cancer 5_133071366 rs6596100 ENSG00000170606.14 HSPA4 19404 4.1e-06 -0.121631 2e-08 breast cancer 5_133071366 rs6596100 ENSG00000170606.14 HSPA4 19404 4.1e-06 -0.121631 8e-09 breast cancer 5_154976135 rs6890610 ENSG00000155506.16 LARP1 263233 1.75e-19 0.256905 6e-06 breast cancer 5_154976135 rs6890610 ENSG00000170271.10 FAXDC2 116883 2.7e-06 -0.119757 6e-06 breast cancer 5_43410515 rs73098691 ENSG00000172244.8 C5orf34 -104630 0.000240192 -0.243636 3e-06 breast cancer 5_50345811 rs72749841 ENSG00000170571.11 EMB -97437 3.79e-07 0.1191 7e-10 breast cancer 5_50793817 rs26067 ENSG00000170571.11 EMB 350569 1.66e-05 -0.075408 2e-08 breast cancer 5_53399007 rs4254863 ENSG00000164171.10 ITGA2 409681 0.000183838 0.302999 5e-06 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 3.44e-19 0.418601 5e-09 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 3.44e-19 0.418601 7e-20 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 3.44e-19 0.418601 3e-36 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 3.44e-19 0.418601 3e-27 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 3.44e-19 0.418601 1e-39 breast cancer 5_56736057 rs889312 ENSG00000155542.11 SETD9 -173203 3.44e-19 0.418601 1e-08 breast cancer 5_56737113 rs1862626 ENSG00000155542.11 SETD9 -172147 3.51e-19 0.417835 4e-12 breast cancer 5_56926293 rs11957276 ENSG00000155542.11 SETD9 17033 9.65e-07 0.266349 5e-11 breast cancer 5_56977866 rs10036895 ENSG00000155542.11 SETD9 68606 2.75e-43 0.588121 2e-12 breast cancer 5_81972251 rs111549985 ENSG00000186468.12 RPS23 -306326 4.64e-29 -0.177393 6e-12 breast cancer 5_81972251 rs111549985 ENSG00000205464.11 ATP6AP1L -307211 1.88e-45 0.803495 6e-12 breast cancer 5_81972251 rs111549985 ENSG00000152348.15 ATG10 226 1.5e-57 0.706056 6e-12 breast cancer 5_82161539 rs2407064 ENSG00000152348.15 ATG10 189514 1.8e-55 -0.686273 3e-08 breast cancer 5_82161539 rs2407064 ENSG00000205464.11 ATP6AP1L -117923 1.89e-46 -0.800591 3e-08 breast cancer 5_82161539 rs2407064 ENSG00000186468.12 RPS23 -117038 6.38e-29 0.174684 3e-08 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 6.69e-54 -0.688742 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 7.09e-29 0.177303 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 2.33e-48 -0.827547 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 6.69e-54 -0.688742 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 7.09e-29 0.177303 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 2.33e-48 -0.827547 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 6.69e-54 -0.688742 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 7.09e-29 0.177303 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 2.33e-48 -0.827547 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 6.69e-54 -0.688742 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 7.09e-29 0.177303 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 2.33e-48 -0.827547 4e-09 breast cancer 5_82340549 rs2407156 ENSG00000152348.15 ATG10 368524 6.68e-33 0.545175 2e-06 breast cancer 5_82340549 rs2407156 ENSG00000186468.12 RPS23 61972 4.27e-20 -0.14628 2e-06 breast cancer 5_82340549 rs2407156 ENSG00000205464.11 ATP6AP1L 61087 2.08e-41 0.762105 2e-06 breast cancer 6_122394099 rs74392007 ENSG00000025156.12 HSF2 -5447 7.31e-12 -0.264451 3e-07 breast cancer 6_122554525 rs76092474 ENSG00000025156.12 HSF2 154979 6.79e-09 -0.223111 3e-06 breast cancer 6_127279485 rs2180341 ENSG00000093144.18 ECHDC1 -64124 1.86e-09 -0.115004 3e-08 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 1.23e-61 -0.60483 3e-12 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 1.23e-61 -0.60483 4e-08 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 1.23e-61 -0.60483 2e-12 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 1.23e-61 -0.60483 8e-10 breast cancer 6_25710343 rs68006638 ENSG00000272462.2 LINC02980 -282319 7.74e-11 0.489403 2e-07 breast cancer 6_25710343 rs68006638 ENSG00000112343.10 TRIM38 -252459 9.01e-05 -0.205807 2e-07 breast cancer 6_25710343 rs68006638 ENSG00000186470.13 BTN3A2 -654816 3.62e-48 -0.971591 2e-07 breast cancer 6_25874195 rs13198474 ENSG00000112343.10 TRIM38 -88607 0.000109657 -0.201787 2e-07 breast cancer 6_25874195 rs13198474 ENSG00000186470.13 BTN3A2 -490964 1.84e-49 -0.97526 2e-07 breast cancer 6_25874195 rs13198474 ENSG00000272462.2 LINC02980 -118467 1.27e-10 0.480267 2e-07 breast cancer 6_26175638 rs17598658 ENSG00000112343.10 TRIM38 212836 9.43e-06 -0.213132 2e-09 breast cancer 6_26175638 rs17598658 ENSG00000272462.2 LINC02980 182976 8.11e-08 0.372168 2e-09 breast cancer 6_26175638 rs17598658 ENSG00000186470.13 BTN3A2 -189521 1.57e-61 -0.98743 2e-09 breast cancer 6_26463346 rs13195401 ENSG00000186470.13 BTN3A2 98187 5.56e-84 -1.04265 2e-09 breast cancer 6_26463346 rs13195401 ENSG00000112812.15 PRSS16 -784355 0.000121439 0.292436 2e-09 breast cancer 6_26463346 rs13195401 ENSG00000272462.2 LINC02980 470684 6.34e-06 0.294177 2e-09 breast cancer 6_26463346 rs13195401 ENSG00000112343.10 TRIM38 500544 7.35e-05 -0.178834 2e-09 breast cancer 6_26993501 rs34546498 ENSG00000112812.15 PRSS16 -254200 0.000318127 0.280563 9e-10 breast cancer 6_26993501 rs34546498 ENSG00000186470.13 BTN3A2 628342 7.61e-79 -1.04234 9e-10 breast cancer 6_27307055 rs56114371 ENSG00000186470.13 BTN3A2 941896 2.45e-74 -1.0026 2e-09 breast cancer 6_27307055 rs56114371 ENSG00000187626.8 ZKSCAN4 -945169 0.000202802 0.181557 2e-09 breast cancer 6_27457865 rs34196306 ENSG00000187626.8 ZKSCAN4 -794359 0.000126869 0.190623 1e-09 breast cancer 6_27457865 rs34196306 ENSG00000219392.1 ZNF602P -657763 0.000595537 -0.321932 1e-09 breast cancer 6_27873148 rs45509595 ENSG00000219392.1 ZNF602P -242480 0.000632268 -0.318243 5e-09 breast cancer 6_27873148 rs45509595 ENSG00000187626.8 ZKSCAN4 -379076 1.8e-05 0.211514 5e-09 breast cancer 6_28106103 rs34662244 ENSG00000187626.8 ZKSCAN4 -146121 6.35e-06 0.218648 3e-09 breast cancer 6_28364364 rs13214023 ENSG00000187626.8 ZKSCAN4 112140 1.93e-05 0.209702 1e-09 breast cancer 6_28958443 rs9257408 ENSG00000137185.11 ZSCAN9 733557 9.05e-05 -0.142315 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000204713.10 TRIM27 34454 3.21e-43 0.27418 7e-08 breast cancer 6_28958443 rs9257408 ENSG00000137185.11 ZSCAN9 733557 9.05e-05 -0.142315 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000204713.10 TRIM27 34454 3.21e-43 0.27418 5e-08 breast cancer 6_28958443 rs9257408 ENSG00000137185.11 ZSCAN9 733557 9.05e-05 -0.142315 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000204713.10 TRIM27 34454 3.21e-43 0.27418 5e-07 breast cancer 6_28958443 rs9257408 ENSG00000137185.11 ZSCAN9 733557 9.05e-05 -0.142315 3e-07 breast cancer 6_28958443 rs9257408 ENSG00000204713.10 TRIM27 34454 3.21e-43 0.27418 3e-07 breast cancer 6_29280372 rs3130834 ENSG00000204622.11 HLA-J -725599 1.88e-06 -0.43711 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000204644.9 ZFP57 -400738 1e-26 1.03201 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000239257.1 RPL23AP1 -446510 5.65e-09 0.543769 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000204681.10 GABBR1 -353604 0.000418912 0.170604 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000204632.11 HLA-G -546595 6.53e-07 -0.469213 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000214922.9 HLA-F-AS1 -468621 3.46e-05 0.290442 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000230795.3 HLA-K -646806 3.48e-06 -0.447718 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000204657.3 OR2H2 -307083 0.000131034 0.302204 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000281831.1 HCP5B -593411 1.06e-19 0.885938 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000231130.1 HLA-T -616282 9.63e-08 -0.559932 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000243753.5 HLA-L -979212 0.000105573 -0.406936 5e-09 breast cancer 6_29388554 rs9257809 ENSG00000231130.1 HLA-T -508100 2.51e-09 -0.604276 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000204632.11 HLA-G -438413 4.26e-09 -0.534356 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000243753.5 HLA-L -871030 2.52e-06 -0.476964 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000230795.3 HLA-K -538624 5.02e-08 -0.507551 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000204644.9 ZFP57 -292556 5.6e-28 1.02171 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000239257.1 RPL23AP1 -338328 6.99e-10 0.556343 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000206503.12 HLA-A -552706 1.74e-05 -0.234717 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000204622.11 HLA-J -617417 2.72e-07 -0.455995 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000214922.9 HLA-F-AS1 -360439 0.000438587 0.23929 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000204657.3 OR2H2 -198901 0.000266922 0.279113 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000235290.1 HLA-W -568042 3.61e-05 -0.386663 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000281831.1 HCP5B -485229 1.92e-20 0.874078 3e-08 breast cancer 6_29509637 rs1233480 ENSG00000204632.11 HLA-G -317330 5.71e-06 -0.361051 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000206503.12 HLA-A -431623 0.00014456 -0.180895 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000204644.9 ZFP57 -171473 3.48e-18 0.717493 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000243753.5 HLA-L -749947 4.48e-05 -0.360543 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000204622.11 HLA-J -496334 1.24e-05 -0.338145 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000231130.1 HLA-T -387017 1.28e-07 -0.46717 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000281831.1 HCP5B -364146 1.63e-18 0.722956 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000239257.1 RPL23AP1 -217245 3.01e-07 0.40395 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000204657.3 OR2H2 -77818 5.14e-05 0.26929 5e-08 breast cancer 6_29509637 rs1233480 ENSG00000230795.3 HLA-K -417541 2.18e-05 -0.345557 5e-08 breast cancer 6_29693039 rs3116813 ENSG00000231074.8 HCG18 -634111 0.000107928 -0.177346 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000206503.12 HLA-A -248221 2.25e-07 -0.282537 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000230795.3 HLA-K -234139 2.7e-09 -0.553921 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000231130.1 HLA-T -203615 8e-12 -0.691585 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204644.9 ZFP57 11929 5.05e-32 1.09179 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000243753.5 HLA-L -566545 8.21e-08 -0.543139 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000239257.1 RPL23AP1 -33843 9.73e-11 0.58423 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000066379.14 POLR1H -368602 0.000195567 -0.170413 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204681.10 GABBR1 59063 0.000355045 0.167612 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000281831.1 HCP5B -180744 1.45e-23 0.940403 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204632.11 HLA-G -133928 1.93e-10 -0.579052 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204622.11 HLA-J -312932 3.63e-09 -0.522585 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204657.3 OR2H2 105584 9.38e-05 0.299506 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000214922.9 HLA-F-AS1 -55954 1.4e-05 0.295489 6e-07 breast cancer 6_29785031 rs147680653 ENSG00000137312.14 FLOT1 -957702 6.74e-06 0.0923184 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204644.9 ZFP57 103921 5.05e-32 1.09179 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204632.11 HLA-G -41936 1.93e-10 -0.579052 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000231130.1 HLA-T -111623 8e-12 -0.691585 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000230795.3 -142147 2.7e-09 -0.553921 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204622.11 -220940 3.63e-09 -0.522585 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000239257.1 RPL23AP1 58149 9.73e-11 0.58423 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000206503.12 HLA-A -156229 2.25e-07 -0.282537 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000281831.1 HCP5B -88752 1.45e-23 0.940403 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000066379.14 POLR1H -276610 0.000195567 -0.170413 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000243753.5 HLA-L -474553 8.21e-08 -0.543139 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000214922.9 HLA-F-AS1 36038 1.4e-05 0.295489 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204657.3 OR2H2 197576 9.38e-05 0.299506 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204681.10 GABBR1 151055 0.000355045 0.167612 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000231074.8 HCG18 -542119 0.000107928 -0.177346 1e-06 breast cancer 6_29882943 rs1611579 ENSG00000230795.3 HLA-K -44235 5.06e-10 -0.565032 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000137312.14 FLOT1 -859790 8.38e-06 0.0893148 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000214894.6 LINC00243 -947716 5.31e-13 0.464714 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000243753.5 HLA-L -376641 7.33e-08 -0.532847 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000239257.1 RPL23AP1 156061 1.5e-10 0.565426 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000235290.1 HLA-W -73653 0.000221713 -0.339084 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000231130.1 HLA-T -13711 1.29e-12 -0.700289 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000281831.1 HCP5B 9160 9.32e-25 0.941712 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000206503.12 HLA-A -58317 2.51e-08 -0.296722 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204613.10 TRIM10 -277991 6.33e-05 -0.13408 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000066379.14 POLR1H -178698 8.53e-05 -0.175579 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000214922.9 HLA-F-AS1 133950 2.59e-05 0.279885 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204632.11 HLA-G 55976 6.72e-11 -0.579709 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204657.3 OR2H2 295488 0.000328363 0.269443 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204622.11 HLA-J -123028 8.58e-11 -0.560152 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000231074.8 HCG18 -444207 3.56e-05 -0.184906 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000204644.9 ZFP57 201833 5.69e-32 1.06629 8e-07 breast cancer 6_30003183 rs3094146 ENSG00000204622.11 HLA-J -2788 3.51e-10 -0.541438 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000204613.10 TRIM10 -157751 0.000126323 -0.128392 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000204632.11 HLA-G 176216 3.38e-11 -0.587666 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000204644.9 ZFP57 322073 1.19e-30 1.04388 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000230795.3 HLA-K 76005 2.27e-09 -0.543121 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000066379.14 POLR1H -58458 0.000176132 -0.167497 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000231074.8 HCG18 -323967 1.62e-05 -0.192448 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000243753.5 HLA-L -256401 5.2e-08 -0.538046 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000239257.1 RPL23AP1 276301 2.38e-10 0.558612 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000137312.14 FLOT1 -739550 1.13e-05 0.0879254 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000281831.1 HCP5B 129400 2.56e-24 0.932244 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000204657.3 OR2H2 415728 0.000351152 0.267778 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000235290.1 HLA-W 46587 7.48e-05 -0.36286 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000137411.16 VARS2 -911022 5.38e-05 -0.163532 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000214922.9 HLA-F-AS1 254190 4.51e-05 0.271174 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000214894.6 LINC00243 -827476 3.43e-14 0.486402 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000206503.12 HLA-A 61923 1.88e-08 -0.298901 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000231130.1 HLA-T 106529 3.14e-12 -0.687608 7e-07 breast cancer 6_30107326 rs2523992 ENSG00000204644.9 ZFP57 426216 1.52e-11 0.506461 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000206503.12 HLA-A 166066 0.00010443 -0.165916 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000239257.1 RPL23AP1 380444 1.64e-08 0.39911 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000281831.1 HCP5B 233543 2.57e-10 0.47495 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000231130.1 HLA-T 210672 2.96e-06 -0.37236 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000137312.14 FLOT1 -635407 2.24e-06 0.0755819 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000214922.9 HLA-F-AS1 358333 1.11e-05 0.233071 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000235290.1 HLA-W 150730 0.000149067 -0.277743 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000243753.5 HLA-L -152258 7.58e-06 -0.354862 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000230795.3 HLA-K 180148 7.2e-05 -0.290562 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000204632.11 HLA-G 280359 1.19e-06 -0.346869 2e-07 breast cancer 6_30107326 rs2523992 ENSG00000214894.6 LINC00243 -723333 8.56e-13 0.367542 2e-07 breast cancer 6_30365728 rs3094054 ENSG00000239257.1 RPL23AP1 638846 4.45e-09 0.529335 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204622.11 HLA-J 359757 1.81e-06 -0.423311 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000231074.8 HCG18 38578 0.00014186 -0.173665 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204536.13 CCHCR1 -792510 4.6e-11 0.332205 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000231130.1 HLA-T 469074 3.17e-08 -0.5611 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204525.16 HLA-C -906377 0.000101077 0.207036 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000137411.16 VARS2 -548477 4.37e-07 -0.208029 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204644.9 ZFP57 684618 2.22e-26 0.991722 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000206503.12 HLA-A 424468 5.72e-06 -0.247281 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000281831.1 HCP5B 491945 2.23e-21 0.892658 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000214922.9 HLA-F-AS1 616735 9.79e-05 0.264458 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000235290.1 HLA-W 409132 2.8e-05 -0.391474 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000243753.5 HLA-L 106144 1.25e-06 -0.49029 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000137312.14 FLOT1 -377005 0.000100105 0.0796553 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000066379.14 POLR1H 304087 0.000324984 -0.163916 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000204632.11 HLA-G 538761 2.88e-09 -0.539273 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000214894.6 LINC00243 -464931 2.6e-14 0.498736 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000230795.3 HLA-K 438550 4.35e-06 -0.428688 1e-07 breast cancer 6_30374976 rs115707823 ENSG00000137411.16 VARS2 -539229 8.27e-05 -0.138155 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000239257.1 RPL23AP1 648094 5.44e-06 0.350228 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000214894.6 LINC00243 -455683 6.94e-06 0.253769 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000281831.1 HCP5B 501193 1.61e-14 0.620663 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000206503.12 HLA-A 433716 0.000305112 -0.167597 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000204613.10 TRIM10 214042 0.000190911 -0.108293 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000214922.9 HLA-F-AS1 625983 0.00010571 0.22342 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000204644.9 ZFP57 693866 1.16e-16 0.668346 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000204622.11 HLA-J 369005 0.000288324 -0.274018 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000204536.13 CCHCR1 -783262 7.62e-07 0.21346 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000137411.16 VARS2 -539229 8.27e-05 -0.138155 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000239257.1 RPL23AP1 648094 5.44e-06 0.350228 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000214894.6 LINC00243 -455683 6.94e-06 0.253769 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000281831.1 HCP5B 501193 1.61e-14 0.620663 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000206503.12 HLA-A 433716 0.000305112 -0.167597 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000204613.10 TRIM10 214042 0.000190911 -0.108293 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000214922.9 HLA-F-AS1 625983 0.00010571 0.22342 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000204644.9 ZFP57 693866 1.16e-16 0.668346 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000204622.11 HLA-J 369005 0.000288324 -0.274018 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000204536.13 CCHCR1 -783262 7.62e-07 0.21346 5e-07 breast cancer 6_30473526 rs3132615 ENSG00000214894.6 LINC00243 -357133 3.2e-13 0.452927 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000239257.1 RPL23AP1 746644 8.74e-07 0.42224 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000231130.1 HLA-T 576872 6.77e-05 -0.385259 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204525.16 HLA-C -798579 0.000172415 0.18961 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000137411.16 VARS2 -440679 4.11e-08 -0.213633 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000281831.1 HCP5B 599743 5.31e-18 0.775205 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204632.11 HLA-G 646559 7.84e-07 -0.426933 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000230795.3 HLA-K 546348 1.37e-05 -0.38481 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000214922.9 HLA-F-AS1 724533 0.000391993 0.228304 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204644.9 ZFP57 792416 1.26e-21 0.852129 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000235290.1 HLA-W 516930 0.000300839 -0.320642 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000137331.11 IER3 -271028 0.000122678 0.225739 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204536.13 CCHCR1 -684712 2.49e-09 0.285995 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000243753.5 HLA-L 213942 1.14e-05 -0.421249 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000137312.14 FLOT1 -269207 7.69e-05 0.0766933 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000204622.11 HLA-J 467555 9.12e-05 -0.329825 2e-06 breast cancer 6_30576624 rs3132610 ENSG00000137411.16 VARS2 -337581 4.94e-10 -0.246181 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000137331.11 IER3 -167930 1.94e-05 0.25569 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000243753.5 HLA-L 317040 1.65e-06 -0.468418 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000281831.1 HCP5B 702841 2.03e-17 0.777287 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000137312.14 FLOT1 -166109 7.11e-06 0.0886562 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204536.13 CCHCR1 -581614 1.96e-10 0.310681 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000239257.1 RPL23AP1 849742 8.8e-07 0.430494 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000214894.6 LINC00243 -254035 4.65e-19 0.559435 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000231130.1 HLA-T 679970 2.37e-06 -0.464138 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000230795.3 HLA-K 649446 2.25e-07 -0.465743 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204632.11 HLA-G 749657 1.56e-08 -0.49694 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204525.16 HLA-C -695481 2.78e-05 0.215433 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000235290.1 HLA-W 620028 3.14e-05 -0.375939 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204644.9 ZFP57 895514 5.87e-20 0.834633 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204622.11 HLA-J 570653 1.6e-05 -0.370431 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000206503.12 HLA-A 635364 8.25e-05 -0.207814 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000231074.8 HCG18 249474 0.000270257 -0.160721 1e-06 breast cancer 6_30682249 rs9262142 ENSG00000239257.1 RPL23AP1 955367 1.94e-06 0.418093 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204632.11 HLA-G 855282 1.24e-09 -0.534091 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000137331.11 IER3 -62305 1.45e-05 0.260165 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000137312.14 FLOT1 -60484 1.44e-06 0.0952799 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000231130.1 HLA-T 785595 6.31e-06 -0.445629 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000230795.3 HLA-K 755071 9.99e-08 -0.48015 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000240053.8 LY6G5B -987918 2.43e-05 0.134641 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204536.13 CCHCR1 -475989 6.46e-12 0.335283 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000137411.16 VARS2 -231956 6.43e-11 -0.258789 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000231074.8 HCG18 355099 0.000171098 -0.166213 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000235290.1 HLA-W 725653 3.03e-05 -0.377647 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204525.16 HLA-C -589856 3.86e-05 0.212155 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000243753.5 HLA-L 422665 8.06e-08 -0.524593 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000204622.11 HLA-J 676278 1.9e-05 -0.368129 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000225851.1 HLA-S -700039 0.000162912 -0.360964 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000281831.1 HCP5B 808466 1.3e-18 0.806329 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000206503.12 HLA-A 740989 0.000343275 -0.189686 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000214922.9 HLA-F-AS1 933256 0.000269479 0.239787 3e-06 breast cancer 6_30682249 rs9262142 ENSG00000214894.6 LINC00243 -148410 7.88e-20 0.572305 3e-06 breast cancer 6_30793795 rs3129984 ENSG00000204525.16 HLA-C -478310 1.77e-05 0.214685 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204622.11 HLA-J 787824 2.75e-05 -0.350599 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000137411.16 VARS2 -120410 4.53e-11 -0.253216 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000213719.8 CLIC1 -945968 0.000135358 -0.0721534 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000277402.1 MIR6891 -561521 0.000147745 -0.28873 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000206503.12 HLA-A 852535 0.000206998 -0.190799 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000243753.5 HLA-L 534211 4.54e-09 -0.555293 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000235290.1 HLA-W 837199 9.04e-06 -0.389862 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000225851.1 HLA-S -588493 6.76e-06 -0.417342 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204536.13 CCHCR1 -364443 8.46e-12 0.323796 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000230795.3 HLA-K 866617 8.34e-08 -0.469007 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000137331.11 IER3 49241 1.37e-06 0.280795 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000137312.14 FLOT1 51062 8.42e-08 0.10262 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000231074.8 HCG18 466645 0.000126711 -0.164551 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000214894.6 LINC00243 -36864 1.01e-21 0.581759 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000281831.1 HCP5B 920012 5.59e-18 0.769122 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000204632.11 HLA-G 966828 4.72e-11 -0.560235 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000231130.1 HLA-T 897141 2.65e-06 -0.449673 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000240053.8 LY6G5B -876372 7.7e-05 0.122557 8e-06 breast cancer 6_31347004 rs115392158 ENSG00000204536.13 CCHCR1 188766 4.24e-06 0.155367 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000224389.8 C4B -667758 5.17e-10 0.396862 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000206344.7 HCG27 148866 3.19e-05 -0.095047 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000137331.11 IER3 602450 1.21e-05 0.179708 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000214894.6 LINC00243 516345 2.48e-08 0.24481 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000204338.8 CYP21A1P -658685 8.55e-11 -0.360149 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000231852.6 CYP21A2 -691261 1.55e-08 0.358029 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000244731.7 C4A -635020 4.56e-12 -0.404892 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000277402.1 MIR6891 -8312 1.72e-08 -0.300291 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000204536.13 CCHCR1 188766 4.24e-06 0.155367 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000224389.8 C4B -667758 5.17e-10 0.396862 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000206344.7 HCG27 148866 3.19e-05 -0.095047 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000137331.11 IER3 602450 1.21e-05 0.179708 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000214894.6 LINC00243 516345 2.48e-08 0.24481 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000204338.8 CYP21A1P -658685 8.55e-11 -0.360149 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000231852.6 CYP21A2 -691261 1.55e-08 0.358029 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000244731.7 C4A -635020 4.56e-12 -0.404892 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000277402.1 MIR6891 -8312 1.72e-08 -0.300291 3e-07 breast cancer 6_32699696 rs147527678 ENSG00000196301.3 HLA-DRB9 226196 2.11e-06 0.27116 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000179344.16 HLA-DQB1 31313 6.61e-21 -0.427694 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000223534.1 HLA-DQB1-AS1 39341 4.39e-09 -0.235436 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000244731.7 C4A 717672 6.31e-14 -0.470496 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000231852.6 CYP21A2 661431 2.67e-13 0.493264 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000240065.7 PSMB9 -154465 4.5e-07 0.135412 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000196735.11 HLA-DQA1 71517 2.49e-08 -0.165785 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000198502.5 HLA-DRB5 169409 6.45e-10 -0.288826 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000232629.8 HLA-DQB2 -63838 2.62e-17 0.496526 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000224389.8 C4B 684934 5.65e-12 0.471421 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000204338.8 CYP21A1P 694007 6.33e-08 -0.324513 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000196301.3 HLA-DRB9 226196 2.11e-06 0.27116 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000179344.16 HLA-DQB1 31313 6.61e-21 -0.427694 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000223534.1 HLA-DQB1-AS1 39341 4.39e-09 -0.235436 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000244731.7 C4A 717672 6.31e-14 -0.470496 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000231852.6 CYP21A2 661431 2.67e-13 0.493264 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000240065.7 PSMB9 -154465 4.5e-07 0.135412 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000196735.11 HLA-DQA1 71517 2.49e-08 -0.165785 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000198502.5 HLA-DRB5 169409 6.45e-10 -0.288826 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000232629.8 HLA-DQB2 -63838 2.62e-17 0.496526 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000224389.8 C4B 684934 5.65e-12 0.471421 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000204338.8 CYP21A1P 694007 6.33e-08 -0.324513 6e-08 breast cancer 6_33272092 rs17215231 ENSG00000231500.6 RPS18 44 1.2e-75 -0.391196 9e-13 breast cancer 6_36676721 rs3829964 ENSG00000010030.13 ETV7 288921 3.64e-05 -0.132001 9e-08 breast cancer 6_36676721 rs3829964 ENSG00000255587.7 RAB44 -21130 1.09e-06 0.112783 9e-08 breast cancer 6_43259403 rs111342015 ENSG00000112667.12 DNPH1 29919 8.86e-12 -0.276392 9e-08 breast cancer 7_100437651 rs117911427 ENSG00000205307.11 SAP25 -136169 1.18e-06 0.2453 7e-06 breast cancer 7_100437651 rs117911427 ENSG00000242294.6 STAG3L5P 101239 3.81e-06 0.290974 7e-06 breast cancer 7_100437651 rs117911427 ENSG00000121716.20 PILRB 85475 9.11e-10 0.427112 7e-06 breast cancer 7_102478605 rs369574511 ENSG00000260097.2 SPDYE6 122161 1.39e-06 0.21518 2e-07 breast cancer 7_102478605 rs369574511 ENSG00000160991.15 ORAI2 45499 5.04e-12 0.14906 2e-07 breast cancer 7_102478605 rs369574511 ENSG00000170667.14 RASA4B -39176 4.28e-05 -0.18426 2e-07 breast cancer 7_144351809 rs62485509 ENSG00000170356.8 OR2A20P 98852 4.46e-08 0.344849 4e-12 breast cancer 7_144351809 rs62485509 ENSG00000204959.4 ARHGEF34P 64843 3.49e-06 -0.265105 4e-12 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 6.41e-08 -0.268969 1e-11 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 4.43e-06 0.253603 1e-11 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 6.41e-08 -0.268969 2e-11 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 4.43e-06 0.253603 2e-11 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 6.41e-08 -0.268969 4e-10 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 4.43e-06 0.253603 4e-10 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 6.41e-08 -0.268969 7e-11 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 4.43e-06 0.253603 7e-11 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 6.41e-08 -0.268969 1e-08 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 4.43e-06 0.253603 1e-08 breast cancer 7_144377836 rs720475 ENSG00000204959.4 ARHGEF34P 90870 6.41e-08 -0.268969 7e-12 breast cancer 7_144377836 rs720475 ENSG00000170356.8 OR2A20P 124879 4.43e-06 0.253603 7e-12 breast cancer 7_21901342 rs7971 ENSG00000164649.19 CDCA7L -44742 2.11e-13 -0.273289 2e-08 breast cancer 7_21901342 rs7971 ENSG00000164649.19 CDCA7L -44742 2.11e-13 -0.273289 2e-07 breast cancer 7_38728314 rs1468348 ENSG00000164556.7 FAM183BP 41277 6.78e-05 -0.212523 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000158517.13 NCF1 -77589 0.000136373 0.108754 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000196275.13 GTF2IRD2 -155178 7.25e-07 0.293853 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000277072.4 STAG3L2 -194237 1.45e-07 0.327346 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000123965.13 PMS2P5 -197743 1.04e-09 0.505893 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000263001.5 GTF2I 38706 9.39e-13 0.326781 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000165178.9 NCF1C -475671 3.53e-06 -0.145077 5e-06 breast cancer 7_92001306 rs6964587 ENSG00000127914.16 AKAP9 60439 1.17e-07 -0.0907729 1e-06 breast cancer 7_92001306 rs6964587 ENSG00000127914.16 AKAP9 60439 1.17e-07 -0.0907729 9e-11 breast cancer 7_92001306 rs6964587 ENSG00000127914.16 AKAP9 60439 1.17e-07 -0.0907729 5e-07 breast cancer 7_92001306 rs6964587 ENSG00000127914.16 AKAP9 60439 1.17e-07 -0.0907729 3e-12 breast cancer 7_94484487 rs17268829 ENSG00000242265.5 PEG10 -171838 0.00011781 0.146389 4e-15 breast cancer 7_94484487 rs17268829 ENSG00000242265.5 PEG10 -171838 0.00011781 0.146389 5e-13 breast cancer 8_17926905 rs11779988 ENSG00000078674.17 PCM1 4065 6.5e-06 -0.109061 2e-06 breast cancer 8_17926905 rs11779988 ENSG00000104763.18 ASAH1 -158093 7.09e-35 -0.245218 2e-06 breast cancer 8_19828398 rs7017697 ENSG00000104613.11 INTS10 11258 1.71e-07 -0.115402 1e-06 breast cancer 8_19828398 rs7017697 ENSG00000147408.14 CSGALNACT1 70369 5.65e-06 -0.137691 1e-06 breast cancer 8_220692 rs66823261 ENSG00000223508.5 RPL23AP53 -11444 4.31e-13 0.379557 1e-08 breast cancer 8_220692 rs66823261 ENSG00000223508.5 RPL23AP53 -11444 4.31e-13 0.379557 3e-07 breast cancer 8_220692 rs66823261 ENSG00000223508.5 RPL23AP53 -11444 4.31e-13 0.379557 3e-08 breast cancer 8_220692 rs66823261 ENSG00000223508.5 RPL23AP53 -11444 4.31e-13 0.379557 6e-09 breast cancer 8_22634616 rs6558174 ENSG00000158941.16 CCAR2 29984 1.91e-06 0.079063 3e-06 breast cancer 8_29652100 rs9693444 ENSG00000253182.1 LINC02948 103929 7.29e-08 0.204008 8e-26 breast cancer 8_29652100 rs9693444 ENSG00000253182.1 LINC02948 103929 7.29e-08 0.204008 9e-14 breast cancer 8_29652100 rs9693444 ENSG00000253182.1 LINC02948 103929 7.29e-08 0.204008 2e-21 breast cancer 8_29652100 rs9693444 ENSG00000253182.1 LINC02948 103929 7.29e-08 0.204008 1e-12 breast cancer 8_29652100 rs9693444 ENSG00000253182.1 LINC02948 103929 7.29e-08 0.204008 1e-10 breast cancer 9_104094512 rs4742903 ENSG00000136824.18 SMC2 252 3.64e-07 0.0903639 3e-08 breast cancer 9_104094512 rs4742903 ENSG00000136824.18 SMC2 252 3.64e-07 0.0903639 2e-07 breast cancer 9_133463535 rs3124765 ENSG00000148296.6 SURF6 127137 2.55e-06 -0.173995 2e-06 breast cancer 9_133463535 rs3124765 ENSG00000175164.13 ABO 188321 2.35e-09 0.3922 2e-06 breast cancer 9_133463535 rs3124765 ENSG00000148297.15 MED22 115404 2.6e-06 -0.10318 2e-06 breast cancer 9_133463535 rs3124765 ENSG00000148290.9 SURF1 106859 1.12e-05 0.0898581 2e-06 breast cancer 9_133463535 rs3124765 ENSG00000160325.14 CACFD1 3570 2.92e-06 0.145354 2e-06 breast cancer 9_21995942 rs78545330 ENSG00000147883.10 CDKN2B -13421 1.95e-14 -0.307067 3e-06 breast cancer 9_22006349 rs974336 ENSG00000147883.10 CDKN2B -3014 9.55e-17 -0.327537 6e-09 breast cancer 9_22062135 rs1011970 ENSG00000147883.10 CDKN2B 52772 1.54e-10 -0.214298 4e-09 breast cancer 9_22062135 rs1011970 ENSG00000147883.10 CDKN2B 52772 1.54e-10 -0.214298 3e-08 breast cancer 9_22062135 rs1011970 ENSG00000147883.10 CDKN2B 52772 1.54e-10 -0.214298 2e-06 breast cancer 9_22062135 rs1011970 ENSG00000147883.10 CDKN2B 52772 1.54e-10 -0.214298 2e-07 breast cancer 9_22062135 rs1011970 ENSG00000147883.10 CDKN2B 52772 1.54e-10 -0.214298 5e-07 breast cancer 9_22062135 rs1011970 ENSG00000147883.10 CDKN2B 52772 1.54e-10 -0.214298 6e-08 breast cancer 9_22062135 rs1011970 ENSG00000147883.10 CDKN2B 52772 1.54e-10 -0.214298 5e-06 breast cancer 9_22062135 rs1011970 ENSG00000147883.10 CDKN2B 52772 1.54e-10 -0.214298 1e-15 breast cancer 9_5956008 rs10975370 ENSG00000099219.13 ERMP1 122891 4.22e-06 -0.127562 3e-06 breast cancer X_138931625 rs619373 ENSG00000129682.15 FGF13 -291152 0.000142841 -0.188901 3e-06