DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE breast cancer 1_121121848 rs369304377 ENSG00000171943.11 SRGAP2C -62962 9.68e-05 -0.294619 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000273136.6 NBPF26 397925 4.66e-06 0.457518 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000270231.3 NBPF8 685495 2.16e-08 0.430874 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000226067.6 LINC00623 169409 8.12e-05 -0.255607 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000270392.2 PFN1P2 687796 4.36e-05 0.271648 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000223345.3 H2BP1 4591 5.99e-05 0.365966 2e-29 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.48e-05 0.40954 5e-08 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.48e-05 0.40954 9e-13 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.48e-05 0.40954 2e-52 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.48e-05 0.40954 2e-26 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.48e-05 0.40954 3e-27 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.48e-05 0.40954 8e-54 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.48e-05 0.40954 7e-10 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.48e-05 0.40954 8e-09 breast cancer 1_121538815 rs11249433 ENSG00000273136.6 NBPF26 814892 1.48e-05 0.40954 4e-20 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.12e-11 0.518523 5e-09 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.12e-11 0.518523 2e-07 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.12e-11 0.518523 6e-10 breast cancer 1_145790097 rs12405132 ENSG00000186364.11 NUDT17 -55532 1.12e-11 0.518523 8e-09 breast cancer 1_155176305 rs4971059 ENSG00000160766.14 GBAP1 -51117 1.24e-08 -0.330048 2e-10 breast cancer 1_155176305 rs4971059 ENSG00000160766.14 GBAP1 -51117 1.24e-08 -0.330048 5e-11 breast cancer 1_155212052 rs2974935 ENSG00000160766.14 GBAP1 -15370 4.03e-18 -0.407965 2e-07 breast cancer 1_155212373 rs2075570 ENSG00000160766.14 GBAP1 -15049 4.03e-18 -0.407965 5e-06 breast cancer 1_155216951 rs1057941 ENSG00000160766.14 GBAP1 -10471 3.41e-10 -0.306635 2e-07 breast cancer 1_155302483 rs7524950 ENSG00000160766.14 GBAP1 75061 2.73e-07 -0.31565 3e-09 breast cancer 1_156183252 rs11264454 ENSG00000196189.12 SEMA4A 35886 1.24e-05 0.252913 2e-08 breast cancer 1_156183252 rs11264454 ENSG00000196189.12 SEMA4A 35886 1.24e-05 0.252913 7e-07 breast cancer 1_16013277 rs1763604 ENSG00000186510.11 CLCNKA -5598 8.74e-10 -0.384328 7e-09 breast cancer 1_202218048 rs6678914 ENSG00000133067.17 LGR6 24147 2.2e-05 -0.159415 3e-12 breast cancer 1_202218048 rs6678914 ENSG00000133067.17 LGR6 24147 2.2e-05 -0.159415 1e-08 breast cancer 1_207903511 rs2724379 ENSG00000284237.1 LINC02767 -55781 5.54e-07 -0.336622 2e-07 breast cancer 1_45918469 rs12077974 ENSG00000086015.20 MAST2 131482 4.21e-05 -0.258795 2e-07 breast cancer 1_46135245 rs1707302 ENSG00000086015.20 MAST2 348258 8.95e-07 0.301234 3e-10 breast cancer 1_46135245 rs1707302 ENSG00000086015.20 MAST2 348258 8.95e-07 0.301234 3e-08 breast cancer 1_91555907 rs12134245 ENSG00000097046.12 CDC7 55014 1.79e-05 -0.205329 4e-06 breast cancer 10_121904429 rs7899628 ENSG00000226864.2 ATE1-AS1 -23883 2.29e-07 -0.425008 9e-10 breast cancer 10_27080233 rs7918232 ENSG00000120539.14 MASTL -75034 5.32e-08 0.527144 8e-06 breast cancer 10_92172529 rs72807246 ENSG00000228701.1 TNKS2-DT 374238 5.13e-07 0.73991 3e-06 breast cancer 11_120362917 rs7924772 ENSG00000181264.8 TLCD5 37788 1.41e-05 0.176669 4e-08 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 1.23e-08 -0.530991 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 3.53e-07 0.328931 1e-10 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 1.23e-08 -0.530991 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 3.53e-07 0.328931 9e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 1.23e-08 -0.530991 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 3.53e-07 0.328931 3e-07 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 1.23e-08 -0.530991 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 3.53e-07 0.328931 2e-12 breast cancer 11_65815595 rs3903072 ENSG00000172803.17 SNX32 -18046 1.23e-08 -0.530991 6e-12 breast cancer 11_65815595 rs3903072 ENSG00000172543.7 CTSW -64214 3.53e-07 0.328931 6e-12 breast cancer 11_65935052 rs617791 ENSG00000175334.7 BANF1 -67125 5.33e-05 0.137123 7e-06 breast cancer 11_66843174 rs7570 ENSG00000174080.10 CTSF 274333 2.16e-09 0.281241 8e-06 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 7.94e-25 0.629018 3e-12 breast cancer 11_803017 rs6597981 ENSG00000177595.17 PIDD1 -6629 3.38e-11 0.248092 3e-12 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 7.94e-25 0.629018 1e-12 breast cancer 11_803017 rs6597981 ENSG00000177595.17 PIDD1 -6629 3.38e-11 0.248092 1e-12 breast cancer 15_50402109 rs4774565 ENSG00000104064.16 GABPB1 47151 2.47e-06 -0.274772 2e-06 breast cancer 15_50402109 rs4774565 ENSG00000244879.6 GABPB1-AS1 46700 2.17e-09 -0.478985 2e-06 breast cancer 15_74300521 rs12904134 ENSG00000178718.6 RPP25 -656697 4.74e-05 -0.297724 8e-06 breast cancer 15_74843920 rs6938 ENSG00000178718.6 RPP25 -113298 1.71e-09 -0.442087 9e-08 breast cancer 15_74854991 rs1869959 ENSG00000178718.6 RPP25 -102227 1.33e-08 -0.418438 4e-07 breast cancer 15_74854991 rs1869959 ENSG00000178718.6 RPP25 -102227 1.33e-08 -0.418438 5e-08 breast cancer 15_74854991 rs1869959 ENSG00000178718.6 RPP25 -102227 1.33e-08 -0.418438 6e-08 breast cancer 15_75516399 rs8027365 ENSG00000140400.16 MAN2C1 148245 9.21e-27 0.658597 1e-07 breast cancer 15_90965985 rs77554484 ENSG00000166965.12 RCCD1 10189 7.91e-13 0.486143 1e-15 breast cancer 15_90968837 rs2290203 ENSG00000166965.12 RCCD1 13041 5.72e-08 0.332693 4e-08 breast cancer 15_90968837 rs2290203 ENSG00000166965.12 RCCD1 13041 5.72e-08 0.332693 2e-19 breast cancer 15_90968837 rs2290203 ENSG00000166965.12 RCCD1 13041 5.72e-08 0.332693 8e-10 breast cancer 16_56387075 rs2432539 ENSG00000125124.11 BBS2 -133208 3.55e-06 -0.243474 3e-10 breast cancer 16_56387075 rs2432539 ENSG00000125124.11 BBS2 -133208 3.55e-06 -0.243474 4e-08 breast cancer 16_56497273 rs2303282 ENSG00000125124.11 BBS2 -23010 1.58e-07 -0.278152 3e-07 breast cancer 16_71475893 rs8050871 ENSG00000167377.17 ZNF23 12798 8.94e-06 -0.349173 3e-06 breast cancer 17_2195889 rs16952006 ENSG00000167720.12 SRR -107494 2.7e-05 -0.55245 3e-06 breast cancer 17_45394123 rs4763 ENSG00000214401.4 KANSL1-AS1 -799453 4.22e-25 1.07511 2e-08 breast cancer 17_45394123 rs4763 ENSG00000264070.1 DND1P1 -191748 7.91e-21 1.14567 2e-08 breast cancer 17_45394123 rs4763 ENSG00000176681.14 LRRC37A -898610 4.53e-09 0.646009 2e-08 breast cancer 17_45394123 rs4763 ENSG00000263503.1 MAPK8IP1P2 -208217 1.29e-23 1.11729 2e-08 breast cancer 17_45394123 rs4763 ENSG00000214425.7 LRRC37A4P -156212 9.13e-35 -1.18556 2e-08 breast cancer 17_45394123 rs4763 ENSG00000204650.14 LINC02210 -226205 1.41e-38 1.217 2e-08 breast cancer 17_45941122 rs62061734 ENSG00000108379.9 WNT3 -891936 1.93e-08 0.500241 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000263503.1 MAPK8IP1P2 338782 2.2e-36 1.1894 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214425.7 LRRC37A4P 390787 7.86e-45 -1.16752 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000185829.17 ARL17A -638560 7.36e-09 0.587228 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000204650.14 LINC02210 320794 4.69e-53 1.21143 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214401.4 KANSL1-AS1 -252454 7.93e-39 1.14054 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000176681.14 LRRC37A -351611 3.43e-14 0.737384 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000264070.1 DND1P1 355251 7.35e-31 1.21442 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000238083.7 LRRC37A2 -570389 1.68e-33 1.00857 8e-12 breast cancer 17_46751565 rs199533 ENSG00000214401.4 KANSL1-AS1 557989 3.02e-39 1.16755 5e-08 breast cancer 17_46751565 rs199533 ENSG00000176681.14 LRRC37A 458832 1.77e-13 0.734182 5e-08 breast cancer 17_46751565 rs199533 ENSG00000232300.1 FAM215B 188770 1.42e-05 0.502714 5e-08 breast cancer 17_46751565 rs199533 ENSG00000108379.9 WNT3 -81493 5.21e-09 0.528723 5e-08 breast cancer 17_46751565 rs199533 ENSG00000238083.7 LRRC37A2 240054 6.27e-33 1.02311 5e-08 breast cancer 17_46751565 rs199533 ENSG00000185829.17 ARL17A 171883 7.29e-09 0.599303 5e-08 breast cancer 17_46788237 rs199498 ENSG00000238083.7 LRRC37A2 276726 1.14e-23 0.920254 2e-08 breast cancer 17_46788237 rs199498 ENSG00000185829.17 ARL17A 208555 2.46e-06 0.503681 2e-08 breast cancer 17_46788237 rs199498 ENSG00000176681.14 LRRC37A 495504 8.05e-11 0.668987 2e-08 breast cancer 17_46788237 rs199498 ENSG00000108379.9 WNT3 -44821 1.31e-08 0.524003 2e-08 breast cancer 17_46788237 rs199498 ENSG00000214401.4 KANSL1-AS1 594661 8.36e-28 1.05546 2e-08 breast cancer 17_46788237 rs199498 ENSG00000232300.1 FAM215B 225442 5.16e-05 0.477825 2e-08 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 5.17e-14 -0.559536 1e-08 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 5.17e-14 -0.559536 5e-12 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 5.17e-14 -0.559536 8e-09 breast cancer 17_54979110 rs6504950 ENSG00000166263.13 STXBP4 10324 5.17e-14 -0.559536 2e-13 breast cancer 17_55132413 rs2787486 ENSG00000166263.13 STXBP4 163627 2.02e-06 -0.349267 2e-34 breast cancer 17_55132413 rs2787486 ENSG00000166263.13 STXBP4 163627 2.02e-06 -0.349267 6e-29 breast cancer 17_55135212 rs2628317 ENSG00000166263.13 STXBP4 166426 5.4e-08 -0.445242 4e-16 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 4.63e-06 -0.288402 4e-10 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 4.63e-06 -0.288402 6e-06 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 4.63e-06 -0.288402 5e-07 breast cancer 17_79807926 rs745570 ENSG00000141570.10 CBX8 6243 4.63e-06 -0.288402 1e-09 breast cancer 17_82597601 rs62079673 ENSG00000141580.15 WDR45B -50952 3.39e-05 0.249873 1e-06 breast cancer 17_82946434 rs898097 ENSG00000141560.14 FN3KRP 229751 3.02e-05 -0.354874 2e-06 breast cancer 19_19417997 rs1469713 ENSG00000187664.8 HAPLN4 155201 2.06e-05 0.26993 1e-10 breast cancer 19_19434887 rs2965183 ENSG00000187664.8 HAPLN4 172091 2.06e-05 0.26993 1e-11 breast cancer 19_19434887 rs2965183 ENSG00000187664.8 HAPLN4 172091 2.06e-05 0.26993 6e-12 breast cancer 19_19535463 rs2304098 ENSG00000187664.8 HAPLN4 272667 2.98e-05 0.264094 2e-11 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 2.79e-07 -0.298969 8e-09 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 2.79e-07 -0.298969 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 2.79e-07 -0.298969 1e-16 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 2.79e-07 -0.298969 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 2.79e-07 -0.298969 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 2.79e-07 -0.298969 2e-10 breast cancer 19_43919418 rs375066 ENSG00000176222.8 ZNF404 35367 2.43e-14 -0.453812 2e-14 breast cancer 2_201258707 rs3769821 ENSG00000155749.12 FLACC1 -98691 1.89e-14 -0.577805 4e-18 breast cancer 2_201279205 rs10931936 ENSG00000155749.12 FLACC1 -78193 2.51e-11 -0.516235 6e-06 breast cancer 2_201288355 rs1035142 ENSG00000155749.12 FLACC1 -69043 7.32e-14 -0.558651 3e-09 breast cancer 2_201288502 rs700635 ENSG00000155749.12 FLACC1 -68896 2.51e-11 -0.516235 5e-16 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 2.51e-11 -0.516235 2e-16 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 2.51e-11 -0.516235 7e-07 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 2.51e-11 -0.516235 9e-14 breast cancer 2_201316524 rs1830298 ENSG00000155749.12 FLACC1 -40874 2.51e-11 -0.516235 6e-24 breast cancer 2_201384985 rs2714486 ENSG00000155749.12 FLACC1 27587 4.13e-06 0.453869 7e-10 breast cancer 2_24906604 rs6725517 ENSG00000138031.14 ADCY3 -13235 2.6e-06 0.182844 5e-11 breast cancer 2_24906604 rs6725517 ENSG00000138031.14 ADCY3 -13235 2.6e-06 0.182844 3e-12 breast cancer 2_28896719 rs67073037 ENSG00000171103.10 TRMT61B 26418 2.44e-10 0.408574 5e-09 breast cancer 2_28896719 rs67073037 ENSG00000171103.10 TRMT61B 26418 2.44e-10 0.408574 3e-06 breast cancer 2_28897867 rs4577244 ENSG00000171103.10 TRMT61B 27566 5.69e-10 0.401564 2e-09 breast cancer 21_46360308 rs9808759 ENSG00000182362.13 YBEY 73971 7.77e-10 -0.99755 6e-09 breast cancer 21_46360308 rs9808759 ENSG00000182362.13 YBEY 73971 7.77e-10 -0.99755 4e-07 breast cancer 22_42745087 rs4820477 ENSG00000128274.15 A4GALT 23789 1.76e-06 -0.310965 9e-07 breast cancer 3_156927968 rs7637701 ENSG00000240875.5 LINC00886 110906 8.68e-08 -0.421503 1e-06 breast cancer 3_46825376 rs6796502 ENSG00000178038.16 ALS2CL 131672 5.01e-05 -0.333289 6e-15 breast cancer 3_46825376 rs6796502 ENSG00000178038.16 ALS2CL 131672 5.01e-05 -0.333289 2e-08 breast cancer 3_46825376 rs6796502 ENSG00000178038.16 ALS2CL 131672 5.01e-05 -0.333289 7e-16 breast cancer 3_46825376 rs6796502 ENSG00000178038.16 ALS2CL 131672 5.01e-05 -0.333289 8e-07 breast cancer 3_46846708 rs56387622 ENSG00000178038.16 ALS2CL 153004 1.54e-05 -0.329845 5e-19 breast cancer 5_128098106 rs1112956 ENSG00000245937.7 SLC12A2-DT 14934 1.18e-12 0.563571 9e-06 breast cancer 5_128227188 rs36715 ENSG00000245937.7 SLC12A2-DT 144016 7.04e-06 0.311829 4e-06 breast cancer 5_56977866 rs10036895 ENSG00000155542.11 SETD9 68606 3.04e-10 0.494089 2e-12 breast cancer 5_81972251 rs111549985 ENSG00000205464.11 ATP6AP1L -307211 4.37e-11 0.455544 6e-12 breast cancer 5_81972251 rs111549985 ENSG00000152348.15 ATG10 226 1.61e-15 0.713987 6e-12 breast cancer 5_81972251 rs111549985 ENSG00000186468.12 RPS23 -306326 1.2e-19 -0.485867 6e-12 breast cancer 5_82161539 rs2407064 ENSG00000152348.15 ATG10 189514 7.26e-13 -0.628775 3e-08 breast cancer 5_82161539 rs2407064 ENSG00000186468.12 RPS23 -117038 9.11e-18 0.447604 3e-08 breast cancer 5_82161539 rs2407064 ENSG00000205464.11 ATP6AP1L -117923 1.37e-09 -0.406738 3e-08 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 7.26e-13 -0.628775 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 9.11e-18 0.447604 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 1.37e-09 -0.406738 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 7.26e-13 -0.628775 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 9.11e-18 0.447604 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 1.37e-09 -0.406738 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 7.26e-13 -0.628775 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 9.11e-18 0.447604 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 1.37e-09 -0.406738 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 7.26e-13 -0.628775 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 9.11e-18 0.447604 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 1.37e-09 -0.406738 1e-12 breast cancer 5_82340549 rs2407156 ENSG00000152348.15 ATG10 368524 4.74e-07 0.477213 2e-06 breast cancer 5_82340549 rs2407156 ENSG00000186468.12 RPS23 61972 4.59e-13 -0.404933 2e-06 breast cancer 5_82340549 rs2407156 ENSG00000205464.11 ATP6AP1L 61087 5.09e-08 0.385017 2e-06 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 4.3e-07 -0.387518 2e-12 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 4.3e-07 -0.387518 8e-10 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 4.3e-07 -0.387518 4e-08 breast cancer 6_130027974 rs6569648 ENSG00000198945.7 L3MBTL3 14275 4.3e-07 -0.387518 3e-12 breast cancer 6_25710343 rs68006638 ENSG00000186470.13 BTN3A2 -654816 6.31e-18 -0.982311 2e-07 breast cancer 6_25874195 rs13198474 ENSG00000186470.13 BTN3A2 -490964 6.31e-18 -0.982311 2e-07 breast cancer 6_26175638 rs17598658 ENSG00000186470.13 BTN3A2 -189521 2.51e-22 -1.03031 2e-09 breast cancer 6_26463346 rs13195401 ENSG00000124613.8 ZNF391 -911269 1.39e-05 0.737104 2e-09 breast cancer 6_26463346 rs13195401 ENSG00000186470.13 BTN3A2 98187 1.57e-24 -1.04529 2e-09 breast cancer 6_26993501 rs34546498 ENSG00000186470.13 BTN3A2 628342 1.49e-19 -0.991283 9e-10 breast cancer 6_27307055 rs56114371 ENSG00000186470.13 BTN3A2 941896 1.49e-19 -0.991283 2e-09 breast cancer 6_27873148 rs45509595 ENSG00000216901.1 ZNF603P -303040 0.00010839 0.785285 5e-09 breast cancer 6_28106103 rs34662244 ENSG00000216901.1 ZNF603P -70085 0.000137665 0.756263 3e-09 breast cancer 6_29280372 rs3130834 ENSG00000204644.9 ZFP57 -400738 5.46e-08 1.23288 5e-09 breast cancer 6_29280372 rs3130834 ENSG00000281831.1 HCP5B -593411 1.98e-05 0.937708 5e-09 breast cancer 6_29388554 rs9257809 ENSG00000204644.9 ZFP57 -292556 3.26e-08 1.27321 3e-08 breast cancer 6_29388554 rs9257809 ENSG00000281831.1 HCP5B -485229 1.1e-05 0.981162 3e-08 breast cancer 6_29509637 rs1233480 ENSG00000204644.9 ZFP57 -171473 2.29e-06 0.875252 5e-08 breast cancer 6_29693039 rs3116813 ENSG00000230795.3 HLA-K -234139 7.03e-05 -0.816649 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000281831.1 HCP5B -180744 3.89e-06 0.979052 6e-07 breast cancer 6_29693039 rs3116813 ENSG00000204644.9 ZFP57 11929 1.72e-10 1.3818 6e-07 breast cancer 6_29785031 rs147680653 ENSG00000230795.3 HLA-K -142147 7.03e-05 -0.816649 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000204644.9 ZFP57 103921 1.72e-10 1.3818 1e-06 breast cancer 6_29785031 rs147680653 ENSG00000281831.1 HCP5B -88752 3.89e-06 0.979052 1e-06 breast cancer 6_29882943 rs1611579 ENSG00000204644.9 ZFP57 201833 2.05e-09 1.23879 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000230795.3 HLA-K -44235 2.25e-05 -0.823332 8e-07 breast cancer 6_29882943 rs1611579 ENSG00000281831.1 HCP5B 9160 2.37e-06 0.947834 8e-07 breast cancer 6_30003183 rs3094146 ENSG00000204644.9 ZFP57 322073 2.05e-09 1.23879 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000230795.3 HLA-K 76005 2.25e-05 -0.823332 7e-07 breast cancer 6_30003183 rs3094146 ENSG00000281831.1 HCP5B 129400 2.37e-06 0.947834 7e-07 breast cancer 6_30365728 rs3094054 ENSG00000204644.9 ZFP57 684618 2.71e-08 1.14678 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000230795.3 HLA-K 438550 7.88e-06 -0.857865 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000281831.1 HCP5B 491945 3.67e-06 0.922746 1e-07 breast cancer 6_30365728 rs3094054 ENSG00000176998.4 HCG4 573292 5.63e-05 -0.792547 1e-07 breast cancer 6_30374976 rs115707823 ENSG00000281831.1 HCP5B 501193 2.03e-05 0.722792 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000204644.9 ZFP57 693866 4.73e-05 0.725446 2e-06 breast cancer 6_30374976 rs115707823 ENSG00000281831.1 HCP5B 501193 2.03e-05 0.722792 5e-07 breast cancer 6_30374976 rs115707823 ENSG00000204644.9 ZFP57 693866 4.73e-05 0.725446 5e-07 breast cancer 6_30473526 rs3132615 ENSG00000204644.9 ZFP57 792416 1.64e-07 0.973548 2e-06 breast cancer 6_30473526 rs3132615 ENSG00000146112.11 PPP1R18 -214369 2.6e-05 -0.34444 2e-06 breast cancer 6_30576624 rs3132610 ENSG00000137312.14 FLOT1 -166109 3.32e-05 0.296341 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000146112.11 PPP1R18 -111271 8.98e-06 -0.357975 1e-06 breast cancer 6_30576624 rs3132610 ENSG00000204644.9 ZFP57 895514 4.52e-07 0.92883 1e-06 breast cancer 6_30682249 rs9262142 ENSG00000146112.11 PPP1R18 -5646 6.33e-06 -0.368469 3e-06 breast cancer 6_30793795 rs3129984 ENSG00000204540.10 PSORS1C1 -320955 7.26e-05 -0.579736 8e-06 breast cancer 6_30793795 rs3129984 ENSG00000146112.11 PPP1R18 105900 1.73e-05 -0.328402 8e-06 breast cancer 6_31347004 rs115392158 ENSG00000228789.6 HCG22 293554 3.81e-05 -0.343967 3e-07 breast cancer 6_31347004 rs115392158 ENSG00000228789.6 HCG22 293554 3.81e-05 -0.343967 9e-06 breast cancer 6_32699696 rs147527678 ENSG00000179344.16 HLA-DQB1 31313 5.89e-08 -0.551825 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000232629.8 HLA-DQB2 -63838 4.08e-08 0.647457 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000179344.16 HLA-DQB1 31313 5.89e-08 -0.551825 5e-07 breast cancer 6_32699696 rs147527678 ENSG00000232629.8 HLA-DQB2 -63838 4.08e-08 0.647457 5e-07 breast cancer 6_33272092 rs17215231 ENSG00000231500.6 RPS18 44 3.07e-19 -0.768821 9e-13 breast cancer 6_43259403 rs111342015 ENSG00000112667.12 DNPH1 29919 2.99e-08 -0.458574 9e-08 breast cancer 7_100437651 rs117911427 ENSG00000242294.6 STAG3L5P 101239 4.31e-06 0.925485 7e-06 breast cancer 7_100437651 rs117911427 ENSG00000121716.20 PILRB 85475 2.25e-05 0.726107 7e-06 breast cancer 7_102478605 rs369574511 ENSG00000161036.12 LRWD1 13676 1.22e-05 -0.242187 2e-07 breast cancer 7_102478605 rs369574511 ENSG00000233297.4 RASA4DP -211864 1.2e-05 0.435532 2e-07 breast cancer 7_102478605 rs369574511 ENSG00000105808.17 RASA4 -138152 1.62e-05 0.395613 2e-07 breast cancer 7_144351809 rs62485509 ENSG00000170356.8 OR2A20P 98852 1e-05 0.52647 4e-12 breast cancer 7_74696373 rs74910854 ENSG00000263001.5 GTF2I 38706 6.9e-09 0.413091 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000196275.13 GTF2IRD2 -155178 2.16e-10 0.777412 5e-06 breast cancer 7_74696373 rs74910854 ENSG00000123965.13 PMS2P5 -197743 3.8e-09 0.888507 5e-06 breast cancer 8_220692 rs66823261 ENSG00000223508.5 RPL23AP53 -11444 2.13e-05 0.328506 3e-07 breast cancer 8_220692 rs66823261 ENSG00000223508.5 RPL23AP53 -11444 2.13e-05 0.328506 1e-08 breast cancer 8_220692 rs66823261 ENSG00000223508.5 RPL23AP53 -11444 2.13e-05 0.328506 6e-09 breast cancer 8_220692 rs66823261 ENSG00000223508.5 RPL23AP53 -11444 2.13e-05 0.328506 3e-08