DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
breast cancer	1_100414772	rs612683	ENSG00000079335.18	CDC14A	63038	1.9e-10	-0.183605	3e-07
breast cancer	1_10506158	rs616488	ENSG00000175279.21	CENPS	75375	9.91e-05	0.150073	1e-08
breast cancer	1_10506158	rs616488	ENSG00000175279.21	CENPS	75375	9.91e-05	0.150073	9e-09
breast cancer	1_10506158	rs616488	ENSG00000175279.21	CENPS	75375	9.91e-05	0.150073	4e-18
breast cancer	1_10506158	rs616488	ENSG00000175279.21	CENPS	75375	9.91e-05	0.150073	4e-11
breast cancer	1_10506158	rs616488	ENSG00000175279.21	CENPS	75375	9.91e-05	0.150073	2e-23
breast cancer	1_10506158	rs616488	ENSG00000175279.21	CENPS	75375	9.91e-05	0.150073	2e-10
breast cancer	1_10506158	rs616488	ENSG00000175279.21	CENPS	75375	9.91e-05	0.150073	5e-20
breast cancer	1_10535965	rs2506889	ENSG00000175279.21	CENPS	105182	0.000101152	0.155813	2e-20
breast cancer	1_10536284	rs12375	ENSG00000175279.21	CENPS	105501	0.000101152	0.155813	1e-05
breast cancer	1_109637134	rs17024629	ENSG00000134184.12	GSTM1	-50680	3.39e-05	0.317615	3e-08
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	8.03e-12	0.25998	3e-08
breast cancer	1_109637134	rs17024629	ENSG00000143028.8	SYPL2	170506	4.77e-05	-0.225627	3e-08
breast cancer	1_109637134	rs17024629	ENSG00000134184.12	GSTM1	-50680	3.39e-05	0.317615	1e-06
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	8.03e-12	0.25998	1e-06
breast cancer	1_109637134	rs17024629	ENSG00000143028.8	SYPL2	170506	4.77e-05	-0.225627	1e-06
breast cancer	1_109637134	rs17024629	ENSG00000134184.12	GSTM1	-50680	3.39e-05	0.317615	1e-06
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	8.03e-12	0.25998	1e-06
breast cancer	1_109637134	rs17024629	ENSG00000143028.8	SYPL2	170506	4.77e-05	-0.225627	1e-06
breast cancer	1_113630788	rs1230666	ENSG00000116793.15	PHTF1	-128701	1.95e-05	0.229634	4e-10
breast cancer	1_119716347	rs666930	ENSG00000092621.11	PHGDH	56549	1.03e-05	0.120382	5e-08
breast cancer	1_121121848	rs369304377	ENSG00000270231.3	NBPF8	685495	1.1e-07	0.208553	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000273136.6	NBPF26	397925	5.93e-15	0.418801	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000226067.6	LINC00623	169409	4.79e-17	-0.339283	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000223345.3	H2BP1	4591	3.11e-19	0.47273	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000171943.11	SRGAP2C	-62962	1.85e-12	-0.28504	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000270392.2	PFN1P2	687796	3.35e-13	0.303626	2e-29
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.29e-16	0.418094	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	1.72e-11	-0.268115	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.4e-11	-0.266781	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.62e-13	0.38668	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.29e-16	0.418094	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	1.72e-11	-0.268115	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.4e-11	-0.266781	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.62e-13	0.38668	8e-09
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.29e-16	0.418094	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	1.72e-11	-0.268115	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.4e-11	-0.266781	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.62e-13	0.38668	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.29e-16	0.418094	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	1.72e-11	-0.268115	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.4e-11	-0.266781	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.62e-13	0.38668	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.29e-16	0.418094	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	1.72e-11	-0.268115	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.4e-11	-0.266781	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.62e-13	0.38668	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.29e-16	0.418094	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	1.72e-11	-0.268115	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.4e-11	-0.266781	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.62e-13	0.38668	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.29e-16	0.418094	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	1.72e-11	-0.268115	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.4e-11	-0.266781	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.62e-13	0.38668	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.29e-16	0.418094	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	1.72e-11	-0.268115	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.4e-11	-0.266781	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.62e-13	0.38668	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.29e-16	0.418094	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000226067.6	LINC00623	586376	1.72e-11	-0.268115	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000171943.11	SRGAP2C	354005	1.4e-11	-0.266781	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000273136.6	NBPF26	814892	1.62e-13	0.38668	9e-13
breast cancer	1_145790097	rs12405132	ENSG00000117281.15	CD160	70626	1.58e-05	0.158266	6e-10
breast cancer	1_145790097	rs12405132	ENSG00000198483.12	ANKRD35	-95769	1.06e-07	0.19962	6e-10
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.7e-16	0.37698	6e-10
breast cancer	1_145790097	rs12405132	ENSG00000117281.15	CD160	70626	1.58e-05	0.158266	2e-07
breast cancer	1_145790097	rs12405132	ENSG00000198483.12	ANKRD35	-95769	1.06e-07	0.19962	2e-07
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.7e-16	0.37698	2e-07
breast cancer	1_145790097	rs12405132	ENSG00000117281.15	CD160	70626	1.58e-05	0.158266	8e-09
breast cancer	1_145790097	rs12405132	ENSG00000198483.12	ANKRD35	-95769	1.06e-07	0.19962	8e-09
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.7e-16	0.37698	8e-09
breast cancer	1_145790097	rs12405132	ENSG00000117281.15	CD160	70626	1.58e-05	0.158266	5e-09
breast cancer	1_145790097	rs12405132	ENSG00000198483.12	ANKRD35	-95769	1.06e-07	0.19962	5e-09
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	3.7e-16	0.37698	5e-09
breast cancer	1_149934520	rs11205303	ENSG00000261716.1	H2BC20P	85496	0.000355393	0.127673	5e-07
breast cancer	1_149934520	rs11205303	ENSG00000261716.1	H2BC20P	85496	0.000355393	0.127673	1e-14
breast cancer	1_155016057	rs77548871	ENSG00000160685.13	ZBTB7B	13427	0.000116404	-0.195897	5e-09
breast cancer	1_155176305	rs4971059	ENSG00000160766.14	GBAP1	-51117	2.52e-17	-0.333419	2e-10
breast cancer	1_155176305	rs4971059	ENSG00000185499.16	MUC1	-16611	0.000133201	0.117841	2e-10
breast cancer	1_155176305	rs4971059	ENSG00000160766.14	GBAP1	-51117	2.52e-17	-0.333419	5e-11
breast cancer	1_155176305	rs4971059	ENSG00000185499.16	MUC1	-16611	0.000133201	0.117841	5e-11
breast cancer	1_155212052	rs2974935	ENSG00000160766.14	GBAP1	-15370	9.82e-53	-0.486764	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000177628.15	GBA	-32647	2.53e-08	-0.115775	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000160767.20	FAM189B	-43431	0.000155203	0.0706171	2e-07
breast cancer	1_155212052	rs2974935	ENSG00000236675.1	MTX1P1	-18923	0.000111932	-0.194046	2e-07
breast cancer	1_155212373	rs2075570	ENSG00000236675.1	MTX1P1	-18602	0.000148283	-0.190172	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000160767.20	FAM189B	-43110	0.000219036	0.0688605	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000160766.14	GBAP1	-15049	9.53e-55	-0.493079	5e-06
breast cancer	1_155212373	rs2075570	ENSG00000177628.15	GBA	-32326	5.08e-09	-0.120991	5e-06
breast cancer	1_155216951	rs1057941	ENSG00000185499.16	MUC1	24035	1.14e-05	0.123182	2e-07
breast cancer	1_155216951	rs1057941	ENSG00000177628.15	GBA	-27748	1.52e-05	-0.0946348	2e-07
breast cancer	1_155216951	rs1057941	ENSG00000160766.14	GBAP1	-10471	2.64e-31	-0.405649	2e-07
breast cancer	1_155302483	rs7524950	ENSG00000143630.9	HCN3	24900	1.93e-08	-0.174435	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000177628.15	GBA	57784	7.63e-07	-0.118108	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000160767.20	FAM189B	47000	8.69e-09	0.121977	3e-09
breast cancer	1_155302483	rs7524950	ENSG00000160766.14	GBAP1	75061	4.35e-22	-0.376151	3e-09
breast cancer	1_155446537	rs10796944	ENSG00000160767.20	FAM189B	191054	0.000299337	0.0863669	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000160766.14	GBAP1	219115	1.74e-12	-0.312872	7e-10
breast cancer	1_155446537	rs10796944	ENSG00000143630.9	HCN3	168954	6.05e-05	-0.140017	7e-10
breast cancer	1_155587180	rs12091730	ENSG00000160766.14	GBAP1	359758	7.21e-12	-0.303073	2e-10
breast cancer	1_155587180	rs12091730	ENSG00000143630.9	HCN3	309597	0.000105915	-0.134822	2e-10
breast cancer	1_155697170	rs348196	ENSG00000160766.14	GBAP1	469748	4.93e-11	-0.276874	2e-08
breast cancer	1_156183252	rs11264454	ENSG00000196189.12	SEMA4A	35886	1.12e-19	0.235978	7e-07
breast cancer	1_156183252	rs11264454	ENSG00000196189.12	SEMA4A	35886	1.12e-19	0.235978	2e-08
breast cancer	1_16013277	rs1763604	ENSG00000173641.17	HSPB7	-6317	6.61e-05	0.091852	7e-09
breast cancer	1_168127440	rs60504827	ENSG00000143158.10	MPC2	190400	7.85e-06	-0.131302	2e-07
breast cancer	1_202209914	rs17489300	ENSG00000133067.17	LGR6	16013	5.34e-09	-0.166396	2e-08
breast cancer	1_202209914	rs17489300	ENSG00000133067.17	LGR6	16013	5.34e-09	-0.166396	9e-10
breast cancer	1_202218048	rs6678914	ENSG00000133067.17	LGR6	24147	1.37e-10	-0.1767	1e-08
breast cancer	1_202218048	rs6678914	ENSG00000133067.17	LGR6	24147	1.37e-10	-0.1767	3e-12
breast cancer	1_203832121	rs59867004	ENSG00000182004.12	SNRPE	-29482	3.82e-05	0.0948176	1e-10
breast cancer	1_207903511	rs2724379	ENSG00000284237.1	LINC02767	-55781	3.83e-18	-0.304908	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000234329.1	RPL7AP16	266643	1.36e-11	0.324104	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000117450.13	PRDX1	395422	3.59e-11	-0.147558	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000126088.13	UROD	906322	4.02e-07	-0.128102	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000086015.20	MAST2	131482	7.34e-23	-0.295355	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000132763.14	MMACHC	418389	3.17e-06	0.155424	2e-07
breast cancer	1_46135245	rs1707302	ENSG00000117461.14	PIK3R3	2209	4.2e-07	0.162177	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000159588.14	CCDC17	511188	0.000169716	0.139905	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000234329.1	RPL7AP16	483419	2.06e-05	-0.202188	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000280670.2	CCDC163	635193	0.000364001	-0.221798	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000086015.20	MAST2	348258	1.31e-20	0.274346	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000132763.14	MMACHC	635165	1.21e-05	-0.142906	3e-08
breast cancer	1_46135245	rs1707302	ENSG00000117461.14	PIK3R3	2209	4.2e-07	0.162177	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000159588.14	CCDC17	511188	0.000169716	0.139905	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000234329.1	RPL7AP16	483419	2.06e-05	-0.202188	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000280670.2	CCDC163	635193	0.000364001	-0.221798	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000086015.20	MAST2	348258	1.31e-20	0.274346	3e-10
breast cancer	1_46135245	rs1707302	ENSG00000132763.14	MMACHC	635165	1.21e-05	-0.142906	3e-10
breast cancer	1_8035440	rs225132	ENSG00000116288.12	PARK7	81149	2.41e-08	0.0991208	3e-06
breast cancer	1_8326670	rs9628987; rs7535752	ENSG00000162426.14	SLC45A1	8844	7.67e-06	0.164525	5e-06
breast cancer	1_91555907	rs12134245	ENSG00000097046.12	CDC7	55014	3.18e-14	-0.214439	4e-06
breast cancer	10_102125800	rs10883710	ENSG00000269609.5	C10orf95-AS1	-324017	0.000235621	0.140167	3e-06
breast cancer	10_121865675	rs10510102	ENSG00000226864.2	ATE1-AS1	-62637	3.83e-06	0.288986	2e-06
breast cancer	10_121904429	rs7899628	ENSG00000226864.2	ATE1-AS1	-23883	5.23e-22	-0.471413	9e-10
breast cancer	10_121904429	rs7899628	ENSG00000107669.17	ATE1	-24372	5.84e-06	0.113542	9e-10
breast cancer	10_122041907	rs2253762	ENSG00000107669.17	ATE1	113106	0.000128728	-0.103661	2e-09
breast cancer	10_21522558	rs11012730	ENSG00000204682.5	MIR1915HG	25296	3.43e-05	0.131606	3e-10
breast cancer	10_21533927	rs10828247	ENSG00000204682.5	MIR1915HG	36665	1.14e-05	0.142332	3e-13
breast cancer	10_21535798	rs10828249	ENSG00000204682.5	MIR1915HG	38536	1.14e-05	0.142332	5e-08
breast cancer	10_21545607	rs7098100	ENSG00000204682.5	MIR1915HG	48345	8.45e-06	0.142397	1e-18
breast cancer	10_21668300	rs2183271	ENSG00000204682.5	MIR1915HG	171038	8.26e-05	0.125029	3e-07
breast cancer	10_21744013	rs7072776	ENSG00000204682.5	MIR1915HG	246751	2.68e-05	-0.149397	4e-14
breast cancer	10_21744013	rs7072776	ENSG00000204682.5	MIR1915HG	246751	2.68e-05	-0.149397	1e-14
breast cancer	10_21744013	rs7072776	ENSG00000204682.5	MIR1915HG	246751	2.68e-05	-0.149397	2e-19
breast cancer	10_21744013	rs7072776	ENSG00000204682.5	MIR1915HG	246751	2.68e-05	-0.149397	2e-19
breast cancer	10_21744013	rs7072776	ENSG00000204682.5	MIR1915HG	246751	2.68e-05	-0.149397	8e-10
breast cancer	10_27080233	rs7918232	ENSG00000107897.18	ACBD5	-161897	6.5e-07	-0.158125	8e-06
breast cancer	10_27080233	rs7918232	ENSG00000120539.14	MASTL	-75034	1.35e-30	0.526873	8e-06
breast cancer	10_5752689	rs55910451	ENSG00000057608.16	GDI2	-89443	4.52e-36	-0.368336	4e-07
breast cancer	10_92172529	rs72807246	ENSG00000119938.8	PPP1R3C	539475	0.000186123	0.201428	3e-06
breast cancer	10_92172529	rs72807246	ENSG00000228701.1	TNKS2-DT	374238	1.64e-11	0.565043	3e-06
breast cancer	10_92172529	rs72807246	ENSG00000174721.9	FGFBP3	263046	0.000133422	-0.186192	3e-06
breast cancer	11_111765903	rs643506	ENSG00000255561.6	FDXACB1	-114872	3.82e-05	-0.174779	2e-07
breast cancer	11_111765903	rs643506	ENSG00000137713.15	PPP2R1B	-524	9.21e-20	-0.327374	2e-07
breast cancer	11_117214494	rs77683187	ENSG00000149577.15	SIDT2	35761	1.44e-08	0.240551	2e-06
breast cancer	11_120362917	rs7924772	ENSG00000181264.8	TLCD5	37788	1.8e-16	0.222515	4e-08
breast cancer	11_18642694	rs10832963	ENSG00000179119.14	SPTY2D1	7903	5.4e-06	-0.117024	9e-06
breast cancer	11_1871355	rs4980389	ENSG00000226416.1	MRPL23-AS1	-118565	8.65e-11	0.316414	4e-07
breast cancer	11_1871355	rs4980389	ENSG00000167244.18	IGF2	-269883	4.82e-06	-0.125151	4e-07
breast cancer	11_1874478	rs4980386	ENSG00000167244.18	IGF2	-266760	1.75e-06	-0.129702	9e-17
breast cancer	11_1874478	rs4980386	ENSG00000226416.1	MRPL23-AS1	-115442	2.51e-11	0.32247	9e-17
breast cancer	11_1877434	rs1973765	ENSG00000226416.1	MRPL23-AS1	-112486	1.63e-11	0.320532	1e-37
breast cancer	11_1877434	rs1973765	ENSG00000167244.18	IGF2	-263804	6e-06	-0.121121	1e-37
breast cancer	11_1880867	rs4980383	ENSG00000226416.1	MRPL23-AS1	-109053	5.6e-09	-0.29384	3e-06
breast cancer	11_1880867	rs4980383	ENSG00000226416.1	MRPL23-AS1	-109053	5.6e-09	-0.29384	9e-09
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.61e-08	-0.294412	2e-11
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.61e-08	-0.294412	2e-13
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.61e-08	-0.294412	6e-21
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.61e-08	-0.294412	1e-18
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.61e-08	-0.294412	3e-09
breast cancer	11_1887776	rs3817198	ENSG00000226416.1	MRPL23-AS1	-102144	1.61e-08	-0.294412	1e-10
breast cancer	11_1892909	rs576603	ENSG00000167244.18	IGF2	-248329	5.58e-09	-0.158429	2e-08
breast cancer	11_1892909	rs576603	ENSG00000226416.1	MRPL23-AS1	-97011	1.58e-12	0.343106	2e-08
breast cancer	11_1920716	rs909116	ENSG00000226416.1	MRPL23-AS1	-69204	3.46e-08	0.268931	7e-07
breast cancer	11_1920716	rs909116	ENSG00000167244.18	IGF2	-220522	1.22e-05	-0.119099	7e-07
breast cancer	11_47325389	rs11039183	ENSG00000110514.19	MADD	56228	2.26e-05	-0.113306	6e-06
breast cancer	11_62126500	rs7937840	ENSG00000149503.12	INCENP	2527	1.77e-06	-0.16236	1e-06
breast cancer	11_62126500	rs7937840	ENSG00000149503.12	INCENP	2527	1.77e-06	-0.16236	2e-09
breast cancer	11_65815595	rs3903072	ENSG00000254470.2	AP5B1	34793	0.000186916	0.101791	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000214659.4	KRT8P26	88656	1.91e-08	-0.233394	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172638.12	EFEMP2	-57997	7.66e-15	-0.138896	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	2.33e-14	-0.363104	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1e-10	0.248505	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000172500.12	FIBP	-72944	0.000308103	-0.0547156	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	1.91e-07	0.0653146	3e-07
breast cancer	11_65815595	rs3903072	ENSG00000254470.2	AP5B1	34793	0.000186916	0.101791	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000214659.4	KRT8P26	88656	1.91e-08	-0.233394	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172638.12	EFEMP2	-57997	7.66e-15	-0.138896	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	2.33e-14	-0.363104	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1e-10	0.248505	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000172500.12	FIBP	-72944	0.000308103	-0.0547156	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	1.91e-07	0.0653146	2e-12
breast cancer	11_65815595	rs3903072	ENSG00000254470.2	AP5B1	34793	0.000186916	0.101791	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000214659.4	KRT8P26	88656	1.91e-08	-0.233394	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172638.12	EFEMP2	-57997	7.66e-15	-0.138896	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	2.33e-14	-0.363104	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1e-10	0.248505	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000172500.12	FIBP	-72944	0.000308103	-0.0547156	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	1.91e-07	0.0653146	9e-12
breast cancer	11_65815595	rs3903072	ENSG00000254470.2	AP5B1	34793	0.000186916	0.101791	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000214659.4	KRT8P26	88656	1.91e-08	-0.233394	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172638.12	EFEMP2	-57997	7.66e-15	-0.138896	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	2.33e-14	-0.363104	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1e-10	0.248505	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000172500.12	FIBP	-72944	0.000308103	-0.0547156	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	1.91e-07	0.0653146	6e-12
breast cancer	11_65815595	rs3903072	ENSG00000254470.2	AP5B1	34793	0.000186916	0.101791	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000214659.4	KRT8P26	88656	1.91e-08	-0.233394	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172638.12	EFEMP2	-57997	7.66e-15	-0.138896	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172803.17	SNX32	-18046	2.33e-14	-0.363104	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172543.7	CTSW	-64214	1e-10	0.248505	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000172500.12	FIBP	-72944	0.000308103	-0.0547156	1e-10
breast cancer	11_65815595	rs3903072	ENSG00000175334.7	BANF1	-186582	1.91e-07	0.0653146	1e-10
breast cancer	11_65935052	rs617791	ENSG00000173327.7	MAP3K11	320803	2.25e-06	0.12382	7e-06
breast cancer	11_65935052	rs617791	ENSG00000172638.12	EFEMP2	61460	5.53e-07	-0.0920352	7e-06
breast cancer	11_65935052	rs617791	ENSG00000175334.7	BANF1	-67125	4.05e-13	0.0908914	7e-06
breast cancer	11_65935052	rs617791	ENSG00000175376.8	EIF1AD	-67026	0.000110186	-0.0978448	7e-06
breast cancer	11_65935052	rs617791	ENSG00000172803.17	SNX32	101411	1.02e-11	-0.329318	7e-06
breast cancer	11_65935052	rs617791	ENSG00000172543.7	CTSW	55243	1.33e-05	0.171163	7e-06
breast cancer	11_66301747	rs1783730	ENSG00000174744.13	BRMS1	-43378	2.51e-05	0.0734615	3e-07
breast cancer	11_66301747	rs1783730	ENSG00000174080.10	CTSF	-267094	0.000333183	-0.0858697	3e-07
breast cancer	11_66301747	rs1783730	ENSG00000174684.6	B4GAT1	-45945	1.71e-07	0.124886	3e-07
breast cancer	11_66843174	rs7570	ENSG00000248746.5	ACTN3	296779	2.29e-09	0.317359	8e-06
breast cancer	11_66843174	rs7570	ENSG00000255468.6	B4GAT1-DT	495224	0.000184637	0.212699	8e-06
breast cancer	11_66843174	rs7570	ENSG00000174080.10	CTSF	274333	8.78e-36	0.305137	8e-06
breast cancer	11_66843174	rs7570	ENSG00000173621.8	LRFN4	-13473	2.22e-09	-0.178705	8e-06
breast cancer	11_66843174	rs7570	ENSG00000174684.6	B4GAT1	495482	7.33e-08	-0.140366	8e-06
breast cancer	11_69138652	rs72932523	ENSG00000162341.16	TPCN2	89755	0.000154694	0.19433	1e-09
breast cancer	11_803017	rs6597981	ENSG00000177600.8	RPLP2	-6737	2.58e-09	0.098801	3e-12
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	3.38e-67	0.690329	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	3.59e-20	0.1947	3e-12
breast cancer	11_803017	rs6597981	ENSG00000177600.8	RPLP2	-6737	2.58e-09	0.098801	1e-12
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	3.38e-67	0.690329	1e-12
breast cancer	11_803017	rs6597981	ENSG00000177595.17	PIDD1	-6629	3.59e-20	0.1947	1e-12
breast cancer	12_111446804	rs3184504	ENSG00000111275.12	ALDH2	-320083	2.13e-05	-0.0951689	1e-06
breast cancer	12_111446804	rs3184504	ENSG00000111275.12	ALDH2	-320083	2.13e-05	-0.0951689	2e-06
breast cancer	12_111621753	rs11065979	ENSG00000111275.12	ALDH2	-145134	5.07e-06	0.103906	5e-06
breast cancer	12_120997672	rs2464195	ENSG00000157895.11	C12orf43	-18830	4.22e-16	-0.272636	3e-08
breast cancer	12_24884534	rs10842422	ENSG00000060982.14	BCAT1	-64925	3.72e-05	0.110665	3e-06
breast cancer	12_49251457	rs11168936	ENSG00000123416.15	TUBA1B	120060	0.000193206	-0.0785785	9e-07
breast cancer	12_49251457	rs11168936	ENSG00000139537.10	CCDC65	347347	3.05e-06	0.2054	9e-07
breast cancer	12_49251457	rs11168936	ENSG00000167553.15	TUBA1C	42911	3.38e-06	-0.10731	9e-07
breast cancer	14_36658205	rs12885612	ENSG00000198807.12	PAX9	637	5.75e-13	0.349376	8e-09
breast cancer	14_36663564	rs2236007	ENSG00000198807.12	PAX9	5996	2.76e-13	0.350902	2e-09
breast cancer	14_36663564	rs2236007	ENSG00000198807.12	PAX9	5996	2.76e-13	0.350902	2e-13
breast cancer	14_36663564	rs2236007	ENSG00000198807.12	PAX9	5996	2.76e-13	0.350902	1e-25
breast cancer	14_36663564	rs2236007	ENSG00000198807.12	PAX9	5996	2.76e-13	0.350902	4e-21
breast cancer	14_36663564	rs2236007	ENSG00000198807.12	PAX9	5996	2.76e-13	0.350902	5e-10
breast cancer	14_36663564	rs2236007	ENSG00000198807.12	PAX9	5996	2.76e-13	0.350902	9e-13
breast cancer	14_36667340	rs7149262	ENSG00000198807.12	PAX9	9772	2.12e-13	0.356054	2e-21
breast cancer	14_67599772	rs7149859	ENSG00000100564.8	PIGH	-515	3.41e-21	-0.270871	7e-07
breast cancer	14_67599772	rs7149859	ENSG00000054690.13	PLEKHH1	66471	4.55e-06	-0.169321	7e-07
breast cancer	14_92637727	rs11627032	ENSG00000100599.15	RIN3	123953	5e-06	-0.129431	2e-10
breast cancer	14_92637727	rs11627032	ENSG00000100599.15	RIN3	123953	5e-06	-0.129431	4e-09
breast cancer	14_92637727	rs11627032	ENSG00000100599.15	RIN3	123953	5e-06	-0.129431	1e-06
breast cancer	14_92637727	rs11627032	ENSG00000100599.15	RIN3	123953	5e-06	-0.129431	4e-11
breast cancer	14_92637727	rs11627032	ENSG00000100599.15	RIN3	123953	5e-06	-0.129431	2e-06
breast cancer	15_49580388	rs8027730	ENSG00000166262.15	FAM227B	-40543	2.2e-15	0.307037	3e-08
breast cancer	15_50402109	rs4774565	ENSG00000244879.6	GABPB1-AS1	46700	4.62e-21	-0.389075	2e-06
breast cancer	15_50402109	rs4774565	ENSG00000104064.16	GABPB1	47151	8.07e-07	-0.137547	2e-06
breast cancer	15_51321455	rs1004983	ENSG00000186417.13	GLDN	-20174	5.75e-14	-0.222384	3e-06
breast cancer	15_74300521	rs12904134	ENSG00000198794.11	SCAMP5	-656944	0.00016791	-0.157497	8e-06
breast cancer	15_74300521	rs12904134	ENSG00000178718.6	RPP25	-656697	3.31e-08	-0.205649	8e-06
breast cancer	15_74300521	rs12904134	ENSG00000140474.12	ULK3	-542676	0.000121394	-0.102456	8e-06
breast cancer	15_74843920	rs6938	ENSG00000198794.11	SCAMP5	-113545	2.81e-09	-0.252934	9e-08
breast cancer	15_74843920	rs6938	ENSG00000178718.6	RPP25	-113298	9.39e-33	-0.432403	9e-08
breast cancer	15_74843920	rs6938	ENSG00000178802.17	MPI	-46085	1.57e-07	0.11858	9e-08
breast cancer	15_74843920	rs6938	ENSG00000140474.12	ULK3	723	1.92e-11	-0.181167	9e-08
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	9.25e-15	-0.201136	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000198794.11	SCAMP5	-102474	4.85e-07	-0.208447	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000178718.6	RPP25	-102227	1.46e-30	-0.40566	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	3.79e-05	0.0906832	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	9.25e-15	-0.201136	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000198794.11	SCAMP5	-102474	4.85e-07	-0.208447	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000178718.6	RPP25	-102227	1.46e-30	-0.40566	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	3.79e-05	0.0906832	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000140474.12	ULK3	11794	9.25e-15	-0.201136	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000198794.11	SCAMP5	-102474	4.85e-07	-0.208447	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000178718.6	RPP25	-102227	1.46e-30	-0.40566	6e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	3.79e-05	0.0906832	6e-08
breast cancer	15_75516399	rs8027365	ENSG00000140400.16	MAN2C1	148245	1.46e-95	0.66062	1e-07
breast cancer	15_75516399	rs8027365	ENSG00000140398.13	NEIL1	169237	4.81e-06	0.115337	1e-07
breast cancer	15_77977130	rs12906542	ENSG00000260776.5	GOLGA6FP	50284	6.15e-13	0.365099	7e-07
breast cancer	15_77977130	rs12906542	ENSG00000261143.1	ADAMTS7P3	1088	1.12e-06	0.260947	7e-07
breast cancer	15_79777420	rs166870	ENSG00000136371.10	MTHFS	-119959	1.52e-11	-0.337826	3e-07
breast cancer	15_90965985	rs77554484	ENSG00000166965.12	RCCD1	10189	2.81e-71	0.593446	1e-15
breast cancer	15_90965985	rs77554484	ENSG00000258725.1	PRC1-AS1	-6875	3.86e-11	-0.391952	1e-15
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	2.12e-34	0.364782	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	2.96e-07	-0.254859	8e-10
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	2.12e-34	0.364782	4e-08
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	2.96e-07	-0.254859	4e-08
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	2.12e-34	0.364782	2e-19
breast cancer	15_90968837	rs2290203	ENSG00000258725.1	PRC1-AS1	-4023	2.96e-07	-0.254859	2e-19
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	6.6e-27	-0.334155	4e-08
breast cancer	16_56387075	rs2432539	ENSG00000125124.11	BBS2	-133208	6.6e-27	-0.334155	3e-10
breast cancer	16_56497273	rs2303282	ENSG00000125124.11	BBS2	-23010	8.93e-33	-0.365915	3e-07
breast cancer	16_71475893	rs8050871	ENSG00000040199.18	PHLPP2	-248808	5.09e-05	-0.106275	3e-06
breast cancer	16_71475893	rs8050871	ENSG00000167377.17	ZNF23	12798	7.63e-24	-0.341731	3e-06
breast cancer	17_2195889	rs16952006	ENSG00000108963.17	DPH1	165779	7.43e-05	0.211845	3e-06
breast cancer	17_2195889	rs16952006	ENSG00000167720.12	SRR	-107494	1.59e-10	-0.463181	3e-06
breast cancer	17_30689342	rs8081187	ENSG00000176390.11	CRLF3	-135434	8.51e-06	0.243521	2e-07
breast cancer	17_30884649	rs7223535	ENSG00000264538.6	SUZ12P1	175350	9.74e-06	0.198746	4e-10
breast cancer	17_30884649	rs7223535	ENSG00000176390.11	CRLF3	59873	3.4e-07	0.17919	4e-10
breast cancer	17_30887862	rs113934718	ENSG00000264538.6	SUZ12P1	178563	2.24e-05	0.191051	1e-08
breast cancer	17_30887862	rs113934718	ENSG00000176390.11	CRLF3	63086	8.05e-07	0.173877	1e-08
breast cancer	17_30894259	rs62070652	ENSG00000264538.6	SUZ12P1	184960	2.24e-05	0.191051	1e-06
breast cancer	17_30894259	rs62070652	ENSG00000176390.11	CRLF3	69483	8.05e-07	0.173877	1e-06
breast cancer	17_30894259	rs62070652	ENSG00000264538.6	SUZ12P1	184960	2.24e-05	0.191051	6e-09
breast cancer	17_30894259	rs62070652	ENSG00000176390.11	CRLF3	69483	8.05e-07	0.173877	6e-09
breast cancer	17_45394123	rs4763	ENSG00000186868.15	MAPT	-500259	9.13e-06	-0.186383	2e-08
breast cancer	17_45394123	rs4763	ENSG00000263503.1	MAPK8IP1P2	-208217	4.13e-68	1.0927	2e-08
breast cancer	17_45394123	rs4763	ENSG00000176681.14	LRRC37A	-898610	5.42e-32	0.809754	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214401.4	KANSL1-AS1	-799453	2.06e-79	1.11011	2e-08
breast cancer	17_45394123	rs4763	ENSG00000120071.13	KANSL1	-831266	1.7e-05	0.218838	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214425.7	LRRC37A4P	-156212	2.31e-65	-0.982086	2e-08
breast cancer	17_45394123	rs4763	ENSG00000172992.11	DCAKD	333014	1.93e-05	0.209472	2e-08
breast cancer	17_45394123	rs4763	ENSG00000204650.14	LINC02210	-226205	4.97e-98	1.20221	2e-08
breast cancer	17_45394123	rs4763	ENSG00000264070.1	DND1P1	-191748	1.18e-65	1.2001	2e-08
breast cancer	17_45941122	rs62061734	ENSG00000108379.9	WNT3	-891936	5.85e-12	0.345078	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000186868.15	MAPT	46740	4.01e-07	-0.198073	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214425.7	LRRC37A4P	390787	6.34e-104	-1.07707	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000185829.17	ARL17A	-638560	2.22e-09	0.375728	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000263503.1	MAPK8IP1P2	338782	1.58e-92	1.13654	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000264070.1	DND1P1	355251	2.3e-85	1.23178	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000172992.11	DCAKD	880013	8.01e-05	0.180642	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000176681.14	LRRC37A	-351611	1.01e-40	0.841843	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000204650.14	LINC02210	320794	4.6e-137	1.23709	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000120071.13	KANSL1	-284267	1.35e-06	0.228868	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000238083.7	LRRC37A2	-570389	1.85e-92	1.10603	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214401.4	KANSL1-AS1	-252454	2.33e-118	1.17828	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000073969.18	NSF	-649547	7.86e-07	-0.172843	8e-12
breast cancer	17_46751565	rs199533	ENSG00000073969.18	NSF	160896	8.99e-06	-0.153406	5e-08
breast cancer	17_46751565	rs199533	ENSG00000186868.15	MAPT	857183	1.35e-08	-0.217912	5e-08
breast cancer	17_46751565	rs199533	ENSG00000120071.13	KANSL1	526176	6.06e-07	0.232553	5e-08
breast cancer	17_46751565	rs199533	ENSG00000214401.4	KANSL1-AS1	557989	7.72e-136	1.20552	5e-08
breast cancer	17_46751565	rs199533	ENSG00000176681.14	LRRC37A	458832	9.91e-40	0.820287	5e-08
breast cancer	17_46751565	rs199533	ENSG00000108379.9	WNT3	-81493	6.07e-13	0.354714	5e-08
breast cancer	17_46751565	rs199533	ENSG00000185829.17	ARL17A	171883	1.52e-09	0.373775	5e-08
breast cancer	17_46751565	rs199533	ENSG00000238083.7	LRRC37A2	240054	5.26e-94	1.09538	5e-08
breast cancer	17_46788237	rs199498	ENSG00000186868.15	MAPT	893855	5.31e-06	-0.170849	2e-08
breast cancer	17_46788237	rs199498	ENSG00000120071.13	KANSL1	562848	0.000246194	0.167144	2e-08
breast cancer	17_46788237	rs199498	ENSG00000214401.4	KANSL1-AS1	594661	6.45e-83	1.00754	2e-08
breast cancer	17_46788237	rs199498	ENSG00000185829.17	ARL17A	208555	1.49e-08	0.341441	2e-08
breast cancer	17_46788237	rs199498	ENSG00000108379.9	WNT3	-44821	4.51e-16	0.38675	2e-08
breast cancer	17_46788237	rs199498	ENSG00000176681.14	LRRC37A	495504	1.97e-33	0.738592	2e-08
breast cancer	17_46788237	rs199498	ENSG00000238083.7	LRRC37A2	276726	4.46e-61	0.911838	2e-08
breast cancer	17_50196930	rs2075555	ENSG00000108823.15	SGCA	30945	1.72e-06	-0.144974	8e-08
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	9.3e-08	-0.133054	2e-13
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	2.11e-52	-0.503538	2e-13
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	9.3e-08	-0.133054	8e-09
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	2.11e-52	-0.503538	8e-09
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	9.3e-08	-0.133054	1e-08
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	2.11e-52	-0.503538	1e-08
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	9.3e-08	-0.133054	5e-12
breast cancer	17_54979110	rs6504950	ENSG00000166263.13	STXBP4	10324	2.11e-52	-0.503538	5e-12
breast cancer	17_55132413	rs2787486	ENSG00000141198.14	TOM1L1	233026	0.000147544	-0.0910811	6e-29
breast cancer	17_55132413	rs2787486	ENSG00000166263.13	STXBP4	163627	6.17e-40	-0.429226	6e-29
breast cancer	17_55132413	rs2787486	ENSG00000141198.14	TOM1L1	233026	0.000147544	-0.0910811	2e-34
breast cancer	17_55132413	rs2787486	ENSG00000166263.13	STXBP4	163627	6.17e-40	-0.429226	2e-34
breast cancer	17_55135212	rs2628317	ENSG00000166263.13	STXBP4	166426	9.92e-36	-0.438124	4e-16
breast cancer	17_55135212	rs2628317	ENSG00000141198.14	TOM1L1	235825	1.17e-05	-0.112531	4e-16
breast cancer	17_74776908	rs62084913	ENSG00000109062.11	SLC9A3R1	27995	7.27e-06	-0.15401	9e-06
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	5.15e-08	-0.203659	6e-06
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	5.15e-08	-0.203659	4e-10
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	5.15e-08	-0.203659	5e-07
breast cancer	17_79807926	rs745570	ENSG00000141570.10	CBX8	6243	5.15e-08	-0.203659	1e-09
breast cancer	17_81211408	rs9913021	ENSG00000141577.13	CEP131	-11591	5.6e-13	-0.190296	2e-06
breast cancer	17_82597601	rs62079673	ENSG00000141580.15	WDR45B	-50952	6.91e-20	0.234465	1e-06
breast cancer	17_82946434	rs898097	ENSG00000141556.20	TBCD	194370	0.000102978	0.126691	2e-06
breast cancer	17_82946434	rs898097	ENSG00000141560.14	FN3KRP	229751	1.88e-25	-0.465214	2e-06
breast cancer	18_22897971	rs12962334	ENSG00000265939.1	UBE2CP2	-3024	0.000108712	0.217826	4e-09
breast cancer	18_22897971	rs12962334	ENSG00000265939.1	UBE2CP2	-3024	0.000108712	0.217826	4e-08
breast cancer	18_22897971	rs12962334	ENSG00000265939.1	UBE2CP2	-3024	0.000108712	0.217826	1e-06
breast cancer	19_17099805	rs7249698	ENSG00000099331.13	MYO9B	24024	5.08e-05	-0.101871	4e-07
breast cancer	19_17099805	rs7249698	ENSG00000131351.14	HAUS8	24180	5.25e-08	-0.183886	4e-07
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	1.15e-13	0.24947	1e-12
breast cancer	19_17278895	rs8170	ENSG00000130300.8	PLVAP	-98455	9.43e-08	-0.129621	1e-12
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	1.92e-12	-0.205725	1e-12
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.24e-08	0.225717	1e-12
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	1.15e-13	0.24947	2e-09
breast cancer	19_17278895	rs8170	ENSG00000130300.8	PLVAP	-98455	9.43e-08	-0.129621	2e-09
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	1.92e-12	-0.205725	2e-09
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.24e-08	0.225717	2e-09
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	1.15e-13	0.24947	2e-06
breast cancer	19_17278895	rs8170	ENSG00000130300.8	PLVAP	-98455	9.43e-08	-0.129621	2e-06
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	1.92e-12	-0.205725	2e-06
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.24e-08	0.225717	2e-06
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	1.15e-13	0.24947	9e-13
breast cancer	19_17278895	rs8170	ENSG00000130300.8	PLVAP	-98455	9.43e-08	-0.129621	9e-13
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	1.92e-12	-0.205725	9e-13
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.24e-08	0.225717	9e-13
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	1.15e-13	0.24947	7e-21
breast cancer	19_17278895	rs8170	ENSG00000130300.8	PLVAP	-98455	9.43e-08	-0.129621	7e-21
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	1.92e-12	-0.205725	7e-21
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.24e-08	0.225717	7e-21
breast cancer	19_17278895	rs8170	ENSG00000127220.5	ABHD8	-31341	1.15e-13	0.24947	4e-13
breast cancer	19_17278895	rs8170	ENSG00000130300.8	PLVAP	-98455	9.43e-08	-0.129621	4e-13
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	1.92e-12	-0.205725	4e-13
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.24e-08	0.225717	4e-13
breast cancer	19_17282085	rs8100241	ENSG00000130312.6	MRPL34	-10747	1.46e-09	0.14485	4e-08
breast cancer	19_17283116	rs56069439	ENSG00000127220.5	ABHD8	-27120	5.98e-05	0.120879	8e-19
breast cancer	19_17283116	rs56069439	ENSG00000127220.5	ABHD8	-27120	5.98e-05	0.120879	1e-32
breast cancer	19_17283116	rs56069439	ENSG00000127220.5	ABHD8	-27120	5.98e-05	0.120879	9e-09
breast cancer	19_17283315	rs2363956	ENSG00000130312.6	MRPL34	-9517	2.15e-09	0.144144	2e-08
breast cancer	19_17283315	rs2363956	ENSG00000130312.6	MRPL34	-9517	2.15e-09	0.144144	2e-06
breast cancer	19_17290595	rs67397200	ENSG00000127220.5	ABHD8	-19641	1.46e-05	0.129612	2e-08
breast cancer	19_17290595	rs67397200	ENSG00000127220.5	ABHD8	-19641	1.46e-05	0.129612	3e-37
breast cancer	19_17290595	rs67397200	ENSG00000127220.5	ABHD8	-19641	1.46e-05	0.129612	3e-17
breast cancer	19_18422832	rs7258465	ENSG00000130511.15	SSBP4	3968	3.34e-11	-0.180916	3e-28
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	2.23e-10	-0.173711	6e-14
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	9.5e-05	0.0812608	6e-14
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	2.23e-10	-0.173711	4e-15
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	9.5e-05	0.0812608	4e-15
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	2.23e-10	-0.173711	6e-06
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	9.5e-05	0.0812608	6e-06
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	2.23e-10	-0.173711	2e-31
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	9.5e-05	0.0812608	2e-31
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	2.23e-10	-0.173711	5e-15
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	9.5e-05	0.0812608	5e-15
breast cancer	19_18460331	rs4808801	ENSG00000130511.15	SSBP4	41467	2.23e-10	-0.173711	5e-28
breast cancer	19_18460331	rs4808801	ENSG00000105656.12	ELL	-61796	9.5e-05	0.0812608	5e-28
breast cancer	19_18522945	rs172032	ENSG00000130511.15	SSBP4	104081	9.47e-08	-0.138326	1e-16
breast cancer	19_18522945	rs172032	ENSG00000105656.12	ELL	818	1.32e-07	0.102782	1e-16
breast cancer	19_19417997	rs1469713	ENSG00000213996.12	TM6SF2	144606	5.75e-08	0.22238	1e-10
breast cancer	19_19417997	rs1469713	ENSG00000187664.8	HAPLN4	155201	4.17e-11	0.315684	1e-10
breast cancer	19_19434887	rs2965183	ENSG00000187664.8	HAPLN4	172091	4.17e-11	0.315684	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000213996.12	TM6SF2	161496	5.75e-08	0.22238	6e-12
breast cancer	19_19434887	rs2965183	ENSG00000187664.8	HAPLN4	172091	4.17e-11	0.315684	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000213996.12	TM6SF2	161496	5.75e-08	0.22238	1e-11
breast cancer	19_19535463	rs2304098	ENSG00000187664.8	HAPLN4	272667	6.1e-12	0.328489	2e-11
breast cancer	19_19535463	rs2304098	ENSG00000213996.12	TM6SF2	262072	6.46e-08	0.221571	2e-11
breast cancer	19_2226677	rs3815308	ENSG00000065000.15	AP3D1	62212	2.04e-10	0.121114	7e-06
breast cancer	19_2226677	rs3815308	ENSG00000104885.17	DOT1L	62528	4.02e-05	0.109754	7e-06
breast cancer	19_2226677	rs3815308	ENSG00000104899.7	AMH	-22632	1.03e-05	0.215561	7e-06
breast cancer	19_43779080	rs1685191	ENSG00000167637.16	ZNF283	-48212	6.33e-06	-0.162069	4e-20
breast cancer	19_43779080	rs1685191	ENSG00000204920.10	ZNF155	-188782	3.02e-06	-0.206126	4e-20
breast cancer	19_43779080	rs1685191	ENSG00000176222.8	ZNF404	-104971	3.94e-12	-0.247565	4e-20
breast cancer	19_43782361	rs3760982	ENSG00000167637.16	ZNF283	-44931	1.17e-07	-0.189483	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	4.79e-19	-0.313388	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000204920.10	ZNF155	-185501	1.47e-12	-0.308182	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000167637.16	ZNF283	-44931	1.17e-07	-0.189483	1e-16
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	4.79e-19	-0.313388	1e-16
breast cancer	19_43782361	rs3760982	ENSG00000204920.10	ZNF155	-185501	1.47e-12	-0.308182	1e-16
breast cancer	19_43782361	rs3760982	ENSG00000167637.16	ZNF283	-44931	1.17e-07	-0.189483	2e-14
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	4.79e-19	-0.313388	2e-14
breast cancer	19_43782361	rs3760982	ENSG00000204920.10	ZNF155	-185501	1.47e-12	-0.308182	2e-14
breast cancer	19_43782361	rs3760982	ENSG00000167637.16	ZNF283	-44931	1.17e-07	-0.189483	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	4.79e-19	-0.313388	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000204920.10	ZNF155	-185501	1.47e-12	-0.308182	2e-10
breast cancer	19_43782361	rs3760982	ENSG00000167637.16	ZNF283	-44931	1.17e-07	-0.189483	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	4.79e-19	-0.313388	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000204920.10	ZNF155	-185501	1.47e-12	-0.308182	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000167637.16	ZNF283	-44931	1.17e-07	-0.189483	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	4.79e-19	-0.313388	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000204920.10	ZNF155	-185501	1.47e-12	-0.308182	8e-09
breast cancer	19_43919418	rs375066	ENSG00000204920.10	ZNF155	-48444	5.12e-06	-0.206645	2e-14
breast cancer	19_43919418	rs375066	ENSG00000176222.8	ZNF404	35367	7.42e-40	-0.455855	2e-14
breast cancer	19_43919418	rs375066	ENSG00000167637.16	ZNF283	92126	2.54e-05	-0.155326	2e-14
breast cancer	19_51869723	rs10411161	ENSG00000198093.10	ZNF649	-35317	6.48e-13	-0.334451	7e-06
breast cancer	19_51942133	rs8113308	ENSG00000197608.11	ZNF841	-153632	6.77e-07	0.133385	6e-07
breast cancer	19_51942133	rs8113308	ENSG00000269235.1	ZNF350-AS1	-7001	8.38e-19	0.543266	6e-07
breast cancer	19_51942133	rs8113308	ENSG00000161551.14	ZNF577	54157	2.99e-06	-0.170736	6e-07
breast cancer	2_171513371	rs11680449	ENSG00000071967.11	CYBRD1	-8876	1.31e-06	0.14156	4e-09
breast cancer	2_171568284	rs11675683	ENSG00000071967.11	CYBRD1	46037	1.81e-18	0.230612	4e-08
breast cancer	2_200878871	rs115635831	ENSG00000240344.8	PPIL3	-10432	4.1e-05	-0.711776	1e-06
breast cancer	2_201071148	rs114962751	ENSG00000240344.8	PPIL3	181845	4.08e-05	-0.711882	7e-08
breast cancer	2_201258707	rs3769821	ENSG00000155749.12	FLACC1	-98691	1.46e-26	-0.388899	4e-18
breast cancer	2_201279205	rs10931936	ENSG00000155749.12	FLACC1	-78193	6.39e-26	-0.407402	6e-06
breast cancer	2_201279205	rs10931936	ENSG00000240344.8	PPIL3	389902	4.49e-07	-0.265096	6e-06
breast cancer	2_201288355	rs1035142	ENSG00000064012.21	CASP8	54912	5.06e-07	0.166858	3e-09
breast cancer	2_201288355	rs1035142	ENSG00000155749.12	FLACC1	-69043	1.36e-30	-0.405719	3e-09
breast cancer	2_201288502	rs700635	ENSG00000155749.12	FLACC1	-68896	4.22e-26	-0.408821	5e-16
breast cancer	2_201288502	rs700635	ENSG00000240344.8	PPIL3	399199	2.64e-07	-0.270265	5e-16
breast cancer	2_201316524	rs1830298	ENSG00000240344.8	PPIL3	427221	2.05e-07	-0.272742	6e-24
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	2.66e-26	-0.410385	6e-24
breast cancer	2_201316524	rs1830298	ENSG00000240344.8	PPIL3	427221	2.05e-07	-0.272742	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	2.66e-26	-0.410385	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000240344.8	PPIL3	427221	2.05e-07	-0.272742	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	2.66e-26	-0.410385	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000240344.8	PPIL3	427221	2.05e-07	-0.272742	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	2.66e-26	-0.410385	9e-14
breast cancer	2_201384985	rs2714486	ENSG00000155749.12	FLACC1	27587	7.18e-16	0.382542	7e-10
breast cancer	2_201502866	rs77688320	ENSG00000155749.12	FLACC1	145468	3.79e-12	0.365118	3e-09
breast cancer	2_24748307	rs6710503	ENSG00000138092.10	CENPO	-45076	4.03e-05	-0.149037	5e-06
breast cancer	2_24748307	rs6710503	ENSG00000138031.14	ADCY3	-171532	3.08e-11	-0.228863	5e-06
breast cancer	2_24748307	rs6710503	ENSG00000084676.15	NCOA1	256393	1.24e-06	0.113995	5e-06
breast cancer	2_24906604	rs6725517	ENSG00000224165.5	DNAJC27-AS1	-64786	4.22e-05	-0.13415	3e-12
breast cancer	2_24906604	rs6725517	ENSG00000138031.14	ADCY3	-13235	4.39e-32	0.336507	3e-12
breast cancer	2_24906604	rs6725517	ENSG00000138092.10	CENPO	113221	1.08e-20	0.283679	3e-12
breast cancer	2_24906604	rs6725517	ENSG00000224165.5	DNAJC27-AS1	-64786	4.22e-05	-0.13415	5e-11
breast cancer	2_24906604	rs6725517	ENSG00000138031.14	ADCY3	-13235	4.39e-32	0.336507	5e-11
breast cancer	2_24906604	rs6725517	ENSG00000138092.10	CENPO	113221	1.08e-20	0.283679	5e-11
breast cancer	2_25068670	rs1971136	ENSG00000224165.5	DNAJC27-AS1	97280	7.04e-06	0.147704	5e-09
breast cancer	2_25068670	rs1971136	ENSG00000138031.14	ADCY3	148831	6.64e-14	-0.223629	5e-09
breast cancer	2_25068670	rs1971136	ENSG00000138092.10	CENPO	275287	9.62e-12	-0.21236	5e-09
breast cancer	2_25222417	rs113953597	ENSG00000138092.10	CENPO	429034	7.26e-05	-0.144575	1e-08
breast cancer	2_28896719	rs67073037	ENSG00000213639.9	PPP1CB	145079	0.00012408	-0.0752612	3e-06
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	2.3e-10	0.293523	3e-06
breast cancer	2_28896719	rs67073037	ENSG00000189350.12	TOGARAM2	-59892	6.03e-05	-0.196855	3e-06
breast cancer	2_28896719	rs67073037	ENSG00000213639.9	PPP1CB	145079	0.00012408	-0.0752612	5e-09
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	2.3e-10	0.293523	5e-09
breast cancer	2_28896719	rs67073037	ENSG00000189350.12	TOGARAM2	-59892	6.03e-05	-0.196855	5e-09
breast cancer	2_28897867	rs4577244	ENSG00000189350.12	TOGARAM2	-58744	7.37e-05	-0.194636	2e-09
breast cancer	2_28897867	rs4577244	ENSG00000213639.9	PPP1CB	146227	0.000138555	-0.0747684	2e-09
breast cancer	2_28897867	rs4577244	ENSG00000171103.10	TRMT61B	27566	1.82e-10	0.295232	2e-09
breast cancer	2_69900097	rs6716937	ENSG00000196975.15	ANXA4	255672	7.06e-07	0.116082	4e-07
breast cancer	2_69945455	rs6756513	ENSG00000116005.11	PCYOX1	-311931	0.000127452	0.0882691	4e-07
breast cancer	20_34000289	rs2284378	ENSG00000101460.12	MAP1LC3A	-546565	1.64e-07	0.110136	1e-08
breast cancer	20_34002002	rs2300206	ENSG00000101460.12	MAP1LC3A	-544852	1.64e-07	0.110136	2e-08
breast cancer	20_34002002	rs2300206	ENSG00000101460.12	MAP1LC3A	-544852	1.64e-07	0.110136	6e-06
breast cancer	20_34131991	rs11907546	ENSG00000101460.12	MAP1LC3A	-414863	1.22e-05	0.0883447	3e-09
breast cancer	20_34131991	rs11907546	ENSG00000101460.12	MAP1LC3A	-414863	1.22e-05	0.0883447	3e-06
breast cancer	20_39051206	rs742276	ENSG00000101452.14	DHX35	88907	1.14e-05	-0.12351	9e-06
breast cancer	20_39051206	rs742276	ENSG00000101447.14	FAM83D	124894	7e-17	-0.271499	9e-06
breast cancer	21_15148511	rs2823093	ENSG00000180530.10	NRIP1	82575	6.07e-09	0.13877	7e-16
breast cancer	21_15148511	rs2823093	ENSG00000180530.10	NRIP1	82575	6.07e-09	0.13877	2e-21
breast cancer	21_15148511	rs2823093	ENSG00000180530.10	NRIP1	82575	6.07e-09	0.13877	2e-12
breast cancer	21_15148511	rs2823093	ENSG00000180530.10	NRIP1	82575	6.07e-09	0.13877	2e-20
breast cancer	21_15148511	rs2823093	ENSG00000180530.10	NRIP1	82575	6.07e-09	0.13877	3e-13
breast cancer	21_46360308	rs9808759	ENSG00000160284.14	SPATC1L	175832	1.35e-08	-0.534327	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000160299.16	PCNT	36186	1.75e-05	0.176252	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	2.36e-24	-0.893344	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000160284.14	SPATC1L	175832	1.35e-08	-0.534327	6e-09
breast cancer	21_46360308	rs9808759	ENSG00000160299.16	PCNT	36186	1.75e-05	0.176252	6e-09
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	2.36e-24	-0.893344	6e-09
breast cancer	22_29714557	rs140091	ENSG00000100330.15	MTMR3	-168598	5.36e-05	-0.417637	4e-10
breast cancer	22_30027471	rs12537	ENSG00000184117.11	NIPSNAP1	446134	0.000186715	-0.10345	9e-07
breast cancer	22_30168182	rs139059349	ENSG00000100330.15	MTMR3	285027	0.000133439	-0.437786	2e-07
breast cancer	22_30196819	rs16988381	ENSG00000100325.14	ASCC2	358515	1.02e-06	0.52947	3e-09
breast cancer	22_38172826	rs738321	ENSG00000198792.12	TMEM184B	-100208	9.46e-10	-0.15106	7e-14
breast cancer	22_38172826	rs738321	ENSG00000185022.11	MAFF	-29056	8.81e-06	-0.104651	7e-14
breast cancer	22_38172826	rs738321	ENSG00000184381.18	PLA2G6	-32864	3.04e-07	0.132755	7e-14
breast cancer	22_38172826	rs738321	ENSG00000198792.12	TMEM184B	-100208	9.46e-10	-0.15106	1e-13
breast cancer	22_38172826	rs738321	ENSG00000185022.11	MAFF	-29056	8.81e-06	-0.104651	1e-13
breast cancer	22_38172826	rs738321	ENSG00000184381.18	PLA2G6	-32864	3.04e-07	0.132755	1e-13
breast cancer	22_38174306	rs4820318	ENSG00000184381.18	PLA2G6	-31384	6.31e-08	0.139469	1e-13
breast cancer	22_38174306	rs4820318	ENSG00000185022.11	MAFF	-27576	4.15e-05	-0.0962649	1e-13
breast cancer	22_38174306	rs4820318	ENSG00000198792.12	TMEM184B	-98728	1.16e-09	-0.149691	1e-13
breast cancer	22_38798063	rs9619765	ENSG00000100211.10	CBY1	141423	2.79e-06	-0.288076	1e-06
breast cancer	22_40868537	rs62237039	ENSG00000100138.13	SNU13	-821967	8.86e-05	0.220316	5e-09
breast cancer	22_40868537	rs62237039	ENSG00000196236.12	XPNPEP3	11440	0.000108116	-0.372849	5e-09
breast cancer	22_41061455	rs141447235	ENSG00000196236.12	XPNPEP3	204358	1.33e-05	-0.293163	2e-09
breast cancer	22_41061455	rs141447235	ENSG00000100138.13	SNU13	-629049	2.21e-05	0.166796	2e-09
breast cancer	22_41323244	rs73176670	ENSG00000196236.12	XPNPEP3	466147	4.86e-06	-0.310427	1e-08
breast cancer	22_41323244	rs73176670	ENSG00000100138.13	SNU13	-367260	6.13e-05	0.159257	1e-08
breast cancer	22_41642782	rs73161324	ENSG00000100138.13	SNU13	-47722	1.01e-05	0.18055	2e-09
breast cancer	22_41642782	rs73161324	ENSG00000196236.12	XPNPEP3	785685	0.0004031	-0.248732	2e-09
breast cancer	22_41815785	rs8137282	ENSG00000100138.13	SNU13	125281	1.3e-05	0.219278	2e-07
breast cancer	22_42745087	rs4820477	ENSG00000128274.15	A4GALT	23789	1.04e-11	-0.158378	9e-07
breast cancer	3_14520620	rs1106333	ENSG00000144596.12	GRIP2	-35455	9.9e-07	0.368899	6e-08
breast cancer	3_150762029	rs1838337	ENSG00000120742.10	SERP1	158801	9e-05	-0.202682	1e-08
breast cancer	3_156645453	rs2136690	ENSG00000197980.12	LEKR1	-180028	3.92e-06	0.214404	4e-06
breast cancer	3_156645453	rs2136690	ENSG00000240875.5	LINC00886	-171609	4.38e-14	-0.3285	4e-06
breast cancer	3_156927968	rs7637701	ENSG00000240875.5	LINC00886	110906	2.71e-32	-0.489436	1e-06
breast cancer	3_156927968	rs7637701	ENSG00000174912.7	METTL15P1	213040	2.55e-05	-0.234115	1e-06
breast cancer	3_156927968	rs7637701	ENSG00000163659.12	TIPARP	254733	9.9e-06	-0.146499	1e-06
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	0.00018654	0.326761	6e-15
breast cancer	3_46825376	rs6796502	ENSG00000178038.16	ALS2CL	131672	1.35e-06	-0.244971	6e-15
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	0.00018654	0.326761	2e-08
breast cancer	3_46825376	rs6796502	ENSG00000178038.16	ALS2CL	131672	1.35e-06	-0.244971	2e-08
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	0.00018654	0.326761	7e-16
breast cancer	3_46825376	rs6796502	ENSG00000178038.16	ALS2CL	131672	1.35e-06	-0.244971	7e-16
breast cancer	3_46825376	rs6796502	ENSG00000188086.13	PRSS45P	80621	0.00018654	0.326761	8e-07
breast cancer	3_46825376	rs6796502	ENSG00000178038.16	ALS2CL	131672	1.35e-06	-0.244971	8e-07
breast cancer	3_46846708	rs56387622	ENSG00000188086.13	PRSS45P	101953	2.82e-06	0.381483	5e-19
breast cancer	3_49129027	rs61729152	ENSG00000172113.8	NME6	827342	6.11e-05	-0.571004	6e-06
breast cancer	3_49129027	rs61729152	ENSG00000173531.15	MST1	-560471	0.000589805	-0.459058	6e-06
breast cancer	4_103450498	rs10016947	ENSG00000164039.14	BDH2	350615	4.2e-07	0.330216	9e-06
breast cancer	4_105140377	rs7679673	ENSG00000251586.1	TET2-AS1	-37686	2.09e-05	-0.191533	1e-10
breast cancer	4_105140377	rs7679673	ENSG00000168769.13	TET2	-5498	1.24e-05	0.119543	1e-10
breast cancer	4_105274384	rs2726492	ENSG00000251586.1	TET2-AS1	96321	0.000166005	0.21419	4e-10
breast cancer	4_105435604	rs77928427	ENSG00000138777.19	PPA2	-38477	2.16e-05	-0.118789	3e-08
breast cancer	4_105435604	rs77928427	ENSG00000251586.1	TET2-AS1	257541	0.000266305	0.193955	3e-08
breast cancer	4_57013626	rs4865169	ENSG00000084092.6	NOA1	34987	2.12e-08	0.130965	7e-06
breast cancer	4_57013626	rs4865169	ENSG00000047315.15	POLR2B	34802	6.96e-08	-0.107577	7e-06
breast cancer	4_88322666	rs10022462	ENSG00000246375.2	PPM1K-DT	37724	3.99e-05	0.224405	3e-10
breast cancer	4_88322666	rs10022462	ENSG00000246375.2	PPM1K-DT	37724	3.99e-05	0.224405	2e-09
breast cancer	5_10467590	rs1092913	ENSG00000145495.15	MARCHF6	113887	6.45e-07	-0.126879	2e-06
breast cancer	5_128098106	rs1112956	ENSG00000245937.7	SLC12A2-DT	14934	3.98e-33	0.444474	9e-06
breast cancer	5_128227188	rs36715	ENSG00000245937.7	SLC12A2-DT	144016	2.88e-15	0.271259	4e-06
breast cancer	5_1296644	rs2736109	ENSG00000049656.13	CLPTM1L	-48455	3.07e-05	-0.0748949	2e-08
breast cancer	5_132304843	rs6860806	ENSG00000072682.18	P4HA2	9528	3.34e-14	0.17361	8e-08
breast cancer	5_132304843	rs6860806	ENSG00000197375.12	SLC22A5	-64909	1.1e-19	-0.336179	8e-08
breast cancer	5_132304843	rs6860806	ENSG00000072682.18	P4HA2	9528	3.34e-14	0.17361	3e-08
breast cancer	5_132304843	rs6860806	ENSG00000197375.12	SLC22A5	-64909	1.1e-19	-0.336179	3e-08
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	2.01e-10	-0.229984	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000072682.18	P4HA2	170940	2.53e-21	-0.223132	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000197375.12	SLC22A5	96503	7.97e-17	0.324124	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	2.01e-10	-0.229984	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000072682.18	P4HA2	170940	2.53e-21	-0.223132	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000197375.12	SLC22A5	96503	7.97e-17	0.324124	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	2.01e-10	-0.229984	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000072682.18	P4HA2	170940	2.53e-21	-0.223132	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000197375.12	SLC22A5	96503	7.97e-17	0.324124	1e-08
breast cancer	5_132497907	rs736801	ENSG00000072682.18	P4HA2	202592	1.53e-15	0.195665	8e-08
breast cancer	5_132497907	rs736801	ENSG00000197375.12	SLC22A5	128155	1.95e-10	-0.258494	8e-08
breast cancer	5_132497907	rs736801	ENSG00000197536.11	IRF1-AS1	87271	1.18e-12	0.263344	8e-08
breast cancer	5_154976135	rs6890610	ENSG00000155508.13	CNOT8	118582	5.41e-15	-0.237963	6e-06
breast cancer	5_154976135	rs6890610	ENSG00000082516.8	GEMIN5	37926	3.68e-07	-0.166255	6e-06
breast cancer	5_154976135	rs6890610	ENSG00000170271.10	FAXDC2	116883	2.99e-07	-0.160521	6e-06
breast cancer	5_159141388	rs139824696	ENSG00000245812.2	LINC02202	40905	1.59e-07	0.226635	4e-06
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	4.13e-07	0.261207	3e-27
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	4.13e-07	0.261207	3e-36
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	4.13e-07	0.261207	7e-20
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	4.13e-07	0.261207	1e-08
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	4.13e-07	0.261207	5e-09
breast cancer	5_56736057	rs889312	ENSG00000155542.11	SETD9	-173203	4.13e-07	0.261207	1e-39
breast cancer	5_56737113	rs1862626	ENSG00000155542.11	SETD9	-172147	5.17e-07	0.25737	4e-12
breast cancer	5_56926293	rs11957276	ENSG00000155542.11	SETD9	17033	1.05e-09	0.367429	5e-11
breast cancer	5_56977866	rs10036895	ENSG00000155542.11	SETD9	68606	6.57e-36	0.579518	2e-12
breast cancer	5_81972251	rs111549985	ENSG00000152348.15	ATG10	226	1.51e-46	0.800663	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000186468.12	RPS23	-306326	4.83e-55	-0.449675	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000205464.11	ATP6AP1L	-307211	1.29e-34	0.471978	6e-12
breast cancer	5_82161539	rs2407064	ENSG00000152348.15	ATG10	189514	2.31e-43	-0.760062	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000205464.11	ATP6AP1L	-117923	1.57e-35	-0.467245	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000186468.12	RPS23	-117038	1.03e-55	0.442122	3e-08
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	2.61e-58	0.457218	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.49e-41	-0.757729	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.63e-35	-0.474386	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	2.61e-58	0.457218	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.49e-41	-0.757729	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.63e-35	-0.474386	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	2.61e-58	0.457218	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.49e-41	-0.757729	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.63e-35	-0.474386	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	2.61e-58	0.457218	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.49e-41	-0.757729	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	1.63e-35	-0.474386	5e-11
breast cancer	5_82340549	rs2407156	ENSG00000152348.15	ATG10	368524	2.54e-23	0.569392	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000205464.11	ATP6AP1L	61087	1.49e-36	0.471494	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000186468.12	RPS23	61972	2.37e-39	-0.380408	2e-06
breast cancer	6_127279485	rs2180341	ENSG00000189367.14	KIAA0408	-179906	4.41e-05	-0.133016	3e-08
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.54e-08	-0.214969	8e-10
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.54e-08	-0.214969	4e-08
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.54e-08	-0.214969	3e-12
breast cancer	6_130027974	rs6569648	ENSG00000198945.7	L3MBTL3	14275	1.54e-08	-0.214969	2e-12
breast cancer	6_25710343	rs68006638	ENSG00000186470.13	BTN3A2	-654816	5.53e-34	-0.864992	2e-07
breast cancer	6_25874195	rs13198474	ENSG00000186470.13	BTN3A2	-490964	4.84e-33	-0.848724	2e-07
breast cancer	6_26175638	rs17598658	ENSG00000186470.13	BTN3A2	-189521	4.18e-44	-0.871096	2e-09
breast cancer	6_26175638	rs17598658	ENSG00000276180.1	H4C9	-962950	0.000496421	0.314993	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000197903.7	H2BC12	-683452	0.000343393	0.238688	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000112812.15	PRSS16	-784355	2.15e-09	0.611375	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000186470.13	BTN3A2	98187	8.76e-64	-0.972491	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000124613.8	ZNF391	-911269	8.05e-06	0.399653	2e-09
breast cancer	6_26993501	rs34546498	ENSG00000112812.15	PRSS16	-254200	1.99e-09	0.630076	9e-10
breast cancer	6_26993501	rs34546498	ENSG00000197903.7	H2BC12	-153297	0.000537532	0.237442	9e-10
breast cancer	6_26993501	rs34546498	ENSG00000186470.13	BTN3A2	628342	3.72e-61	-0.984017	9e-10
breast cancer	6_26993501	rs34546498	ENSG00000124613.8	ZNF391	-381114	1.81e-05	0.395072	9e-10
breast cancer	6_27307055	rs56114371	ENSG00000112812.15	PRSS16	59354	1.52e-09	0.623674	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000197903.7	H2BC12	160257	0.000622081	0.230766	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000219392.1	ZNF602P	-808573	8.93e-05	-0.499836	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000197062.11	ZSCAN26	-959955	0.000383948	-0.198603	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000124613.8	ZNF391	-67560	1.08e-05	0.398479	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000216901.1	ZNF603P	-869133	3.49e-05	0.501434	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000186470.13	BTN3A2	941896	3.33e-60	-0.961344	2e-09
breast cancer	6_27457865	rs34196306	ENSG00000197903.7	H2BC12	311067	0.000174999	0.257869	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000219392.1	ZNF602P	-657763	2e-05	-0.554244	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000197062.11	ZSCAN26	-809145	0.000110861	-0.2203	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000112812.15	PRSS16	210164	6.97e-08	0.569838	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000187987.9	ZSCAN23	-985637	1.78e-06	0.479821	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000276180.1	H4C9	319277	0.000409047	0.31659	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000216901.1	ZNF603P	-718323	8.93e-07	0.605241	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000124613.8	ZNF391	83250	4.43e-06	0.423598	1e-09
breast cancer	6_27873148	rs45509595	ENSG00000216901.1	ZNF603P	-303040	2.66e-07	0.630392	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000197062.11	ZSCAN26	-393862	5.44e-06	-0.257314	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000187987.9		-570354	9.65e-07	0.489667	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000280107.1		-297697	2.77e-05	-0.479962	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000124613.8	ZNF391	498533	8.79e-06	0.408693	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000112812.15	PRSS16	625447	2.1e-07	0.546702	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000197903.7	H2BC12	726350	0.0005253	0.237491	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000219392.1	ZNF602P	-242480	2.93e-06	-0.60392	5e-09
breast cancer	6_28106103	rs34662244	ENSG00000197062.11	ZSCAN26	-160907	7.09e-06	-0.249915	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000187987.9	ZSCAN23	-337399	4.82e-07	0.494323	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000219392.1	ZNF602P	-9525	4.25e-06	-0.584198	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000197279.3	ZNF165	24972	0.000720425	-0.3514	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000197903.7	H2BC12	959305	0.000476418	0.235219	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000112812.15	PRSS16	858402	3.82e-07	0.526134	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000216901.1	ZNF603P	-70085	4.1e-07	0.610166	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000124613.8	ZNF391	731488	2.59e-06	0.424473	3e-09
breast cancer	6_28364364	rs13214023	ENSG00000124613.8	ZNF391	989749	3.32e-06	0.41919	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000219392.1	ZNF602P	248736	3.75e-06	-0.586374	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000216901.1	ZNF603P	188176	3.1e-07	0.615249	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000187987.9	ZSCAN23	-79138	5.54e-07	0.490852	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000197062.11	ZSCAN26	97354	6.23e-06	-0.250932	1e-09
breast cancer	6_28958443	rs9257408	ENSG00000206341.7	HLA-H	-930024	0.000213203	0.179395	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000226314.7	ZKSCAN8P1	796662	0.000561671	0.147106	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	2.24e-14	0.418413	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	3.94e-16	0.25166	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000227214.2	HCG15	-27760	5.44e-05	0.207325	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000187987.9	ZSCAN23	514941	4.47e-06	0.208593	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000206341.7	HLA-H	-930024	0.000213203	0.179395	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000226314.7	ZKSCAN8P1	796662	0.000561671	0.147106	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	2.24e-14	0.418413	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	3.94e-16	0.25166	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000227214.2	HCG15	-27760	5.44e-05	0.207325	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000187987.9	ZSCAN23	514941	4.47e-06	0.208593	5e-07
breast cancer	6_28958443	rs9257408	ENSG00000206341.7	HLA-H	-930024	0.000213203	0.179395	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000226314.7	ZKSCAN8P1	796662	0.000561671	0.147106	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	2.24e-14	0.418413	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	3.94e-16	0.25166	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000227214.2	HCG15	-27760	5.44e-05	0.207325	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000187987.9	ZSCAN23	514941	4.47e-06	0.208593	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000206341.7	HLA-H	-930024	0.000213203	0.179395	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000226314.7	ZKSCAN8P1	796662	0.000561671	0.147106	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000216901.1	ZNF603P	782255	2.24e-14	0.418413	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000204713.10	TRIM27	34454	3.94e-16	0.25166	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000227214.2	HCG15	-27760	5.44e-05	0.207325	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000187987.9	ZSCAN23	514941	4.47e-06	0.208593	3e-07
breast cancer	6_29280372	rs3130834	ENSG00000204622.11	HLA-J	-725599	1.59e-06	-0.468417	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000230795.3	HLA-K	-646806	0.000122111	-0.454529	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000239257.1	RPL23AP1	-446510	3.25e-05	0.4869	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000204632.11	HLA-G	-546595	1.41e-06	-0.526428	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000204644.9	ZFP57	-400738	1.85e-20	1.10642	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000187987.9	ZSCAN23	836870	4.21e-06	0.44531	5e-09
breast cancer	6_29280372	rs3130834	ENSG00000281831.1	HCP5B	-593411	1.52e-12	0.78631	5e-09
breast cancer	6_29388554	rs9257809	ENSG00000204622.11	HLA-J	-617417	1.77e-07	-0.482975	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000230795.3	HLA-K	-538624	9.38e-07	-0.548525	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000281831.1	HCP5B	-485229	6.4e-13	0.758674	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000206503.12	HLA-A	-552706	0.000414401	0.215431	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000239257.1	RPL23AP1	-338328	1.03e-05	0.49032	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000187987.9	ZSCAN23	945052	4.21e-05	0.377269	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204644.9	ZFP57	-292556	8.4e-25	1.15462	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204632.11	HLA-G	-438413	4.91e-07	-0.520769	3e-08
breast cancer	6_29388554	rs9257809	ENSG00000204623.9	ZNRD1ASP	-672699	0.000246622	-0.158136	3e-08
breast cancer	6_29509637	rs1233480	ENSG00000239257.1	RPL23AP1	-217245	1.68e-06	0.454179	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000281831.1	HCP5B	-364146	1.46e-11	0.610589	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000204622.11	HLA-J	-496334	1.84e-06	-0.377938	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000204632.11	HLA-G	-317330	9.92e-06	-0.39215	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000232040.2	ZBED9	893425	0.000601982	-0.247276	5e-08
breast cancer	6_29509637	rs1233480	ENSG00000204644.9	ZFP57	-171473	1.52e-16	0.806453	5e-08
breast cancer	6_29693039	rs3116813	ENSG00000235821.1	IFITM4P	-58109	6.57e-05	-0.3987	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204632.11	HLA-G	-133928	1.99e-08	-0.575306	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000146112.11	PPP1R18	-994856	1.44e-09	-0.27247	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000281831.1	HCP5B	-180744	3.16e-14	0.792874	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204622.11	HLA-J	-312932	7.37e-11	-0.593698	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000230795.3	HLA-K	-234139	4.18e-08	-0.607113	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000239257.1	RPL23AP1	-33843	7.51e-07	0.544743	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204623.9	ZNRD1ASP	-368214	9.5e-05	-0.167019	6e-07
breast cancer	6_29693039	rs3116813	ENSG00000204644.9	ZFP57	11929	2.8e-29	1.24032	6e-07
breast cancer	6_29785031	rs147680653	ENSG00000204632.11	HLA-G	-41936	2.44e-08	-0.570705	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000137312.14	FLOT1	-957702	1.91e-05	0.159827	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000204623.9	ZNRD1ASP	-276222	0.000117168	-0.164571	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000239257.1	RPL23AP1	58149	3.75e-07	0.558065	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000206503.12	HLA-A	-156229	0.000352444	0.216049	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000281831.1	HCP5B	-88752	6.37e-15	0.811591	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000230795.3	HLA-K	-142147	4.99e-08	-0.602636	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000204644.9	ZFP57	103921	4.39e-30	1.25386	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000204622.11	HLA-J	-220940	1.89e-10	-0.580177	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000235821.1	IFITM4P	33883	7.03e-05	-0.39638	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000146112.11	PPP1R18	-902864	9.02e-10	-0.275216	1e-06
breast cancer	6_29882943	rs1611579	ENSG00000206503.12	HLA-A	-58317	0.000448726	0.206558	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000281831.1	HCP5B	9160	4.86e-16	0.820127	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000235821.1	IFITM4P	131795	5.14e-05	-0.392833	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204623.9	ZNRD1ASP	-178310	5.36e-05	-0.167829	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000230795.3	HLA-K	-44235	1.45e-08	-0.609015	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000137312.14	FLOT1	-859790	7.48e-05	0.144272	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000146112.11	PPP1R18	-804952	3e-11	-0.289682	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000214922.9	HLA-F-AS1	133950	7.67e-05	0.25913	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204632.11	HLA-G	55976	2.34e-08	-0.556141	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000239257.1	RPL23AP1	156061	9.33e-08	0.569989	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204644.9	ZFP57	201833	5.34e-27	1.15978	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000204622.11	HLA-J	-123028	1.1e-09	-0.541037	8e-07
breast cancer	6_30003183	rs3094146	ENSG00000239257.1	RPL23AP1	276301	2.2e-07	0.552093	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000214922.9	HLA-F-AS1	254190	0.000243769	0.240023	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000230795.3	HLA-K	76005	1.46e-07	-0.564691	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204623.9	ZNRD1ASP	-58070	9.96e-05	-0.161361	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000137312.14	FLOT1	-739550	0.000172518	0.136566	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000235821.1	IFITM4P	252035	9.18e-05	-0.378648	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204622.11	HLA-J	-2788	2.12e-09	-0.53057	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204644.9	ZFP57	322073	4.6e-25	1.11632	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000281831.1	HCP5B	129400	8.03e-16	0.812171	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000204632.11	HLA-G	176216	1.93e-08	-0.557852	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000137411.16	VARS2	-911022	6.9e-05	-0.275431	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000146112.11	PPP1R18	-684712	5e-12	-0.299678	7e-07
breast cancer	6_30107326	rs2523992	ENSG00000214922.9	HLA-F-AS1	358333	0.000346915	0.183308	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000281831.1	HCP5B	233543	5.28e-09	0.467791	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000230795.3	HLA-K	180148	4.62e-08	-0.459113	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000239257.1	RPL23AP1	380444	0.000323273	0.302018	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000204644.9	ZFP57	426216	1.86e-07	0.457601	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000204623.9	ZNRD1ASP	46073	4.15e-10	-0.200512	2e-07
breast cancer	6_30107326	rs2523992	ENSG00000146112.11	PPP1R18	-580569	3.49e-07	-0.174921	2e-07
breast cancer	6_30365728	rs3094054	ENSG00000204538.3	PSORS1C2	-773622	1.46e-05	-0.482225	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204531.17	POU5F1	-815003	1.01e-05	0.416705	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000277402.1	MIR6891	-989588	0.000152661	-0.371072	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204644.9	ZFP57	684618	1.82e-22	1.07016	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000146112.11	PPP1R18	-322167	3.22e-14	-0.33137	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204525.16	HLA-C	-906377	5.69e-08	0.34442	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204622.11	HLA-J	359757	1.39e-06	-0.434894	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000137411.16	VARS2	-548477	5.67e-06	-0.316825	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000281831.1	HCP5B	491945	5.9e-13	0.73888	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204632.11	HLA-G	538761	2.91e-08	-0.557036	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000239257.1	RPL23AP1	638846	1.07e-05	0.475937	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000230795.3	HLA-K	438550	8.78e-07	-0.534812	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204540.10	PSORS1C1	-749022	8.34e-08	-0.55141	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000204536.13	CCHCR1	-792510	5.94e-07	0.308562	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000206503.12	HLA-A	424468	0.000318116	0.21357	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000137312.14	FLOT1	-377005	1.5e-05	0.158728	1e-07
breast cancer	6_30374976	rs115707823	ENSG00000204644.9	ZFP57	693866	5.58e-15	0.733197	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000281831.1	HCP5B	501193	1.47e-09	0.525801	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000230795.3	HLA-K	447798	6.11e-05	-0.368292	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000146112.11	PPP1R18	-312919	1.84e-06	-0.178219	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000239257.1	RPL23AP1	648094	0.000287251	0.330886	5e-07
breast cancer	6_30374976	rs115707823	ENSG00000204644.9	ZFP57	693866	5.58e-15	0.733197	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000281831.1	HCP5B	501193	1.47e-09	0.525801	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000230795.3	HLA-K	447798	6.11e-05	-0.368292	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000146112.11	PPP1R18	-312919	1.84e-06	-0.178219	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000239257.1	RPL23AP1	648094	0.000287251	0.330886	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000228022.5	HCG20	-293299	0.000154031	-0.377692	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000230795.3	HLA-K	546348	7.03e-06	-0.462618	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204644.9	ZFP57	792416	2.87e-19	0.936968	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204525.16	HLA-C	-798579	1.77e-07	0.313435	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204531.17	POU5F1	-707205	2.73e-06	0.417794	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204632.11	HLA-G	646559	2.01e-07	-0.49419	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204540.10	PSORS1C1	-641224	7.69e-07	-0.48153	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204622.11	HLA-J	467555	3.57e-06	-0.395028	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000137411.16	VARS2	-440679	1.82e-06	-0.314499	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000277402.1	MIR6891	-881790	1.07e-05	-0.406692	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000225851.1	HLA-S	-908762	5.83e-05	-0.398733	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000137404.14	NRM	-217894	0.000292949	-0.184885	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000281831.1	HCP5B	599743	2.85e-10	0.614893	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204536.13	CCHCR1	-684712	9.54e-07	0.286301	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000137312.14	FLOT1	-269207	1.62e-06	0.165837	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000204538.3	PSORS1C2	-665824	0.000100298	-0.409572	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000239257.1	RPL23AP1	746644	0.000457088	0.359264	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000206503.12	HLA-A	532266	0.000391537	0.198794	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000146112.11	PPP1R18	-214369	4.62e-15	-0.322742	2e-06
breast cancer	6_30576624	rs3132610	ENSG00000204644.9	ZFP57	895514	1.4e-20	0.985023	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204622.11	HLA-J	570653	4.32e-06	-0.398464	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000239257.1	RPL23AP1	849742	6.84e-05	0.414475	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000137411.16	VARS2	-337581	5.82e-08	-0.362431	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204632.11	HLA-G	749657	4.13e-08	-0.529664	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000137312.14	FLOT1	-166109	2.17e-07	0.182024	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000281831.1	HCP5B	702841	5.24e-11	0.649958	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000230795.3	HLA-K	649446	5.13e-07	-0.524715	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204516.9	MICB	-918257	2.47e-08	0.496872	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204531.17	POU5F1	-604107	1.2e-07	0.47832	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204536.13	CCHCR1	-581614	2.24e-08	0.331165	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204540.10	PSORS1C1	-538126	1.33e-07	-0.521839	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204538.3	PSORS1C2	-562726	0.000248674	-0.39273	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000204525.16	HLA-C	-695481	6.3e-10	0.375492	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000225851.1	HLA-S	-805664	0.000164587	-0.380565	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000146112.11	PPP1R18	-111271	2.4e-16	-0.342573	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000277402.1	MIR6891	-778692	3.2e-05	-0.391137	1e-06
breast cancer	6_30682249	rs9262142	ENSG00000204516.9	MICB	-812632	2.84e-08	0.495976	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000137312.14	FLOT1	-60484	9.13e-08	0.187939	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000240053.8	LY6G5B	-987918	4.92e-05	0.140461	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204536.13	CCHCR1	-475989	4.63e-08	0.324666	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204531.17	POU5F1	-498482	7.04e-08	0.488022	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204632.11	HLA-G	855282	1.01e-08	-0.553892	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204540.10	PSORS1C1	-432501	6.77e-08	-0.534986	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000277402.1	MIR6891	-673067	2.82e-05	-0.394859	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000206503.12	HLA-A	740989	0.000385358	0.202973	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000225851.1	HLA-S	-700039	5.37e-05	-0.408544	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204538.3	PSORS1C2	-457101	0.000185919	-0.40155	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000230795.3	HLA-K	755071	8.57e-07	-0.515873	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000281831.1	HCP5B	808466	5.88e-12	0.681831	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000146112.11	PPP1R18	-5646	2.97e-16	-0.342437	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204622.11	HLA-J	676278	2e-06	-0.412942	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000137411.16	VARS2	-231956	4.14e-08	-0.367291	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000239257.1	RPL23AP1	955367	0.000181254	0.391054	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000204525.16	HLA-C	-589856	5.52e-10	0.377664	3e-06
breast cancer	6_30793795	rs3129984	ENSG00000146112.11	PPP1R18	105900	9.6e-16	-0.328268	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204632.11	HLA-G	966828	3.42e-10	-0.589663	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204525.16	HLA-C	-478310	2.5e-11	0.394791	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000277402.1	MIR6891	-561521	7.69e-06	-0.410561	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204516.9	MICB	-701086	1.05e-08	0.497905	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000206503.12	HLA-A	852535	0.00040812	0.196975	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000137411.16	VARS2	-120410	1.66e-08	-0.368041	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204538.3	PSORS1C2	-345555	2.07e-05	-0.444879	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204540.10	PSORS1C1	-320955	1.31e-09	-0.583881	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000225851.1	HLA-S	-588493	1.05e-05	-0.433712	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000270604.5	HCG17	539331	0.000371393	-0.34599	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000240053.8	LY6G5B	-876372	0.000158182	0.127531	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000137312.14	FLOT1	51062	1.54e-07	0.179975	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000230795.3	HLA-K	866617	8.13e-07	-0.503758	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204622.11	HLA-J	787824	3.3e-06	-0.393973	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000281831.1	HCP5B	920012	2.14e-12	0.677596	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204531.17	POU5F1	-386936	4.03e-07	0.447864	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000204536.13	CCHCR1	-364443	2.12e-07	0.300826	8e-06
breast cancer	6_31347004	rs115392158	ENSG00000213760.10	ATP6V1G2	-199844	0.00016344	-0.192932	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000244731.7	C4A	-635020	1.2e-07	-0.246587	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000228789.6	HCG22	293554	0.000170722	-0.194471	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000231852.6	CYP21A2	-691261	1.33e-06	0.279128	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204540.10	PSORS1C1	232254	2.69e-10	-0.40003	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204574.12	ABCF1	775628	4.1e-05	0.109852	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204338.8	CYP21A1P	-658685	7.01e-06	-0.261027	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204538.3	PSORS1C2	207654	3.36e-05	-0.285789	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000277402.1	MIR6891	-8312	3.47e-08	-0.331974	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000234745.10	HLA-B	-9438	5.16e-05	0.102472	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204592.8	HLA-E	857537	1.74e-05	0.0905356	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000213760.10	ATP6V1G2	-199844	0.00016344	-0.192932	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000244731.7	C4A	-635020	1.2e-07	-0.246587	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000228789.6	HCG22	293554	0.000170722	-0.194471	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000231852.6	CYP21A2	-691261	1.33e-06	0.279128	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204540.10	PSORS1C1	232254	2.69e-10	-0.40003	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204574.12	ABCF1	775628	4.1e-05	0.109852	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204338.8	CYP21A1P	-658685	7.01e-06	-0.261027	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204538.3	PSORS1C2	207654	3.36e-05	-0.285789	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000277402.1	MIR6891	-8312	3.47e-08	-0.331974	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000234745.10	HLA-B	-9438	5.16e-05	0.102472	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204592.8	HLA-E	857537	1.74e-05	0.0905356	9e-06
breast cancer	6_32699696	rs147527678	ENSG00000240065.7	PSMB9	-154465	0.000229928	0.098096	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000198502.5	HLA-DRB5	169409	2.53e-06	-0.308832	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000244731.7	C4A	717672	2.98e-12	-0.356852	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	6.03e-14	-0.405568	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000231852.6	CYP21A2	661431	3.16e-09	0.377014	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000204267.13	TAP2	-139084	0.000109011	0.120463	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000204338.8	CYP21A1P	694007	6.62e-10	-0.394298	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000248290.1	TNXA	687224	0.000178727	-0.254585	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000204308.7	RNF5	521342	0.000163953	-0.127917	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000232629.8	HLA-DQB2	-63838	9.02e-12	0.434851	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000240065.7	PSMB9	-154465	0.000229928	0.098096	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000198502.5	HLA-DRB5	169409	2.53e-06	-0.308832	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000244731.7	C4A	717672	2.98e-12	-0.356852	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	6.03e-14	-0.405568	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000231852.6	CYP21A2	661431	3.16e-09	0.377014	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000204267.13	TAP2	-139084	0.000109011	0.120463	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000204338.8	CYP21A1P	694007	6.62e-10	-0.394298	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000248290.1	TNXA	687224	0.000178727	-0.254585	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000204308.7	RNF5	521342	0.000163953	-0.127917	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000232629.8	HLA-DQB2	-63838	9.02e-12	0.434851	6e-08
breast cancer	6_33272092	rs17215231	ENSG00000235863.3	B3GALT4	-5040	3.78e-06	0.169922	9e-13
breast cancer	6_33272092	rs17215231	ENSG00000231500.6	RPS18	44	3.82e-91	-0.71433	9e-13
breast cancer	6_33272092	rs17215231	ENSG00000231925.11	TAPBP	-42295	1.36e-06	0.25153	9e-13
breast cancer	6_43259403	rs111342015	ENSG00000112667.12	DNPH1	29919	6.89e-05	-0.162834	9e-08
breast cancer	7_100437651	rs117911427	ENSG00000121716.20	PILRB	85475	1.4e-10	0.818158	7e-06
breast cancer	7_100437651	rs117911427	ENSG00000221838.9	AP4M1	335710	0.000151721	-0.424953	7e-06
breast cancer	7_100437651	rs117911427	ENSG00000106290.14	TAF6	318084	0.00014522	-0.271605	7e-06
breast cancer	7_100437651	rs117911427	ENSG00000242294.6	STAG3L5P	101239	9.13e-11	0.837551	7e-06
breast cancer	7_100437651	rs117911427	ENSG00000085514.15	PILRA	64206	8.1e-07	0.609799	7e-06
breast cancer	7_102478605	rs369574511	ENSG00000105808.17	RASA4	-138152	3.38e-09	0.271725	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000160991.15	ORAI2	45499	1.49e-07	0.10726	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000161036.12	LRWD1	13676	4.1e-26	-0.310563	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000005075.15	POLR2J	-302	6.98e-16	0.163698	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000260097.2	SPDYE6	122161	0.000101247	0.222087	2e-07
breast cancer	7_102478605	rs369574511	ENSG00000233297.4	RASA4DP	-211864	3.17e-08	0.310332	2e-07
breast cancer	7_103251337	rs6946892	ENSG00000228049.7	POLR2J2	579708	1.35e-05	0.25854	1e-07
breast cancer	7_103251337	rs6946892	ENSG00000170629.14	DPY19L2P2	-29073	2.51e-06	0.197986	1e-07
breast cancer	7_103251337	rs6946892	ENSG00000105808.17	RASA4	634580	1.2e-06	0.219996	1e-07
breast cancer	7_103251337	rs6946892	ENSG00000267368.1	UPK3BL1	608546	0.000174314	0.227605	1e-07
breast cancer	7_144351809	rs62485509	ENSG00000204959.4	ARHGEF34P	64843	4.58e-10	-0.363562	4e-12
breast cancer	7_144351809	rs62485509	ENSG00000170356.8	OR2A20P	98852	1.03e-10	0.45095	4e-12
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.25e-09	-0.303977	4e-10
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	5.74e-10	0.371267	4e-10
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.25e-09	-0.303977	7e-12
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	5.74e-10	0.371267	7e-12
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.25e-09	-0.303977	2e-11
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	5.74e-10	0.371267	2e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.25e-09	-0.303977	7e-11
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	5.74e-10	0.371267	7e-11
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.25e-09	-0.303977	1e-08
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	5.74e-10	0.371267	1e-08
breast cancer	7_144377836	rs720475	ENSG00000204959.4	ARHGEF34P	90870	1.25e-09	-0.303977	1e-11
breast cancer	7_144377836	rs720475	ENSG00000170356.8	OR2A20P	124879	5.74e-10	0.371267	1e-11
breast cancer	7_144477198	rs13230714	ENSG00000204959.4	ARHGEF34P	190232	1.73e-06	-0.223649	1e-06
breast cancer	7_27950149	rs739704	ENSG00000106049.8	HIBADH	287154	2.07e-05	0.11267	3e-14
breast cancer	7_74696373	rs74910854	ENSG00000277053.4	GTF2IP1	-541323	3.06e-19	-0.7265	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000123965.13	PMS2P5	-197743	6.3e-17	0.815174	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000263001.5	GTF2I	38706	3.2e-12	0.297403	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000277072.4	STAG3L2	-194237	2.6e-08	0.315336	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000196275.13	GTF2IRD2	-155178	2.71e-20	0.631241	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000184616.8	SPDYE12	-216883	7.82e-05	0.385143	5e-06
breast cancer	7_94484487	rs17268829	ENSG00000127990.15	SGCE	-171722	6.55e-06	0.155247	4e-15
breast cancer	7_94484487	rs17268829	ENSG00000127990.15	SGCE	-171722	6.55e-06	0.155247	5e-13
breast cancer	8_103189173	rs12548629	ENSG00000266289.1	LINC02933	-194681	3.67e-05	0.26157	3e-07
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	1.77e-06	0.214779	3e-08
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	1.77e-06	0.214779	1e-08
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	1.77e-06	0.214779	6e-09
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	1.77e-06	0.214779	3e-07
breast cancer	8_22634616	rs6558174	ENSG00000158941.16	CCAR2	29984	1.26e-05	0.0925945	3e-06
breast cancer	8_30372068	rs7834448	ENSG00000254152.1	PPIAP84	21721	6.3e-11	0.36513	7e-06
breast cancer	8_30372068	rs7834448	ENSG00000254109.5	RBPMS-AS1	-13333	2.57e-09	-0.153618	7e-06
breast cancer	8_30372068	rs7834448	ENSG00000127589.4	TUBBP1	20195	4.26e-06	0.25024	7e-06
breast cancer	9_103912867	rs718857	ENSG00000136824.18	SMC2	-181393	6.4e-13	-0.205718	2e-06
breast cancer	9_103912867	rs718857	ENSG00000270332.1	SMC2-DT	-180206	8.59e-05	0.15029	2e-06
breast cancer	9_104094512	rs4742903	ENSG00000270332.1	SMC2-DT	1439	7.84e-10	0.231718	3e-08
breast cancer	9_104094512	rs4742903	ENSG00000136824.18	SMC2	252	2.52e-24	-0.282762	3e-08
breast cancer	9_104094512	rs4742903	ENSG00000270332.1	SMC2-DT	1439	7.84e-10	0.231718	2e-07
breast cancer	9_104094512	rs4742903	ENSG00000136824.18	SMC2	252	2.52e-24	-0.282762	2e-07
breast cancer	9_126634155	rs10760444	ENSG00000136944.17	LMX1B	19712	0.000141491	0.14659	9e-09
breast cancer	9_126634155	rs10760444	ENSG00000136944.17	LMX1B	19712	0.000141491	0.14659	8e-14
breast cancer	9_133463535	rs3124765	ENSG00000148290.9	SURF1	106859	1.93e-10	0.228847	2e-06
breast cancer	9_34723038	rs10814138	ENSG00000205108.5	FAM205A	-6429	8.36e-05	-0.175946	3e-06
breast cancer	9_5956008	rs10975370	ENSG00000183354.11	KIAA2026	-51817	3.28e-07	0.11455	3e-06