DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE breast cancer 1_121121848 rs369304377 ENSG00000270231.3 NBPF8 685495 8.19e-06 0.371247 2e-29 breast cancer 1_121121848 rs369304377 ENSG00000223345.3 H2BP1 4591 1.66e-06 0.634477 2e-29 breast cancer 1_91555907 rs12134245 ENSG00000097046.12 CDC7 55014 2.03e-05 -0.409421 4e-06 breast cancer 10_121904429 rs7899628 ENSG00000226864.2 ATE1-AS1 -23883 1.68e-06 -0.527914 9e-10 breast cancer 10_27080233 rs7918232 ENSG00000120539.14 MASTL -75034 2.34e-06 0.497876 8e-06 breast cancer 11_111765903 rs643506 ENSG00000137713.15 PPP2R1B -524 2.55e-06 -0.387995 2e-07 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 6.68e-11 0.477926 1e-12 breast cancer 11_803017 rs6597981 ENSG00000255284.1 GATD1-DT 25439 6.68e-11 0.477926 3e-12 breast cancer 15_75516399 rs8027365 ENSG00000140400.16 MAN2C1 148245 2.79e-06 0.388241 1e-07 breast cancer 15_90965985 rs77554484 ENSG00000166965.12 RCCD1 10189 2.35e-13 0.785747 1e-15 breast cancer 15_90968837 rs2290203 ENSG00000166965.12 RCCD1 13041 3.74e-09 0.589783 4e-08 breast cancer 15_90968837 rs2290203 ENSG00000166965.12 RCCD1 13041 3.74e-09 0.589783 8e-10 breast cancer 15_90968837 rs2290203 ENSG00000166965.12 RCCD1 13041 3.74e-09 0.589783 2e-19 breast cancer 17_30884649 rs7223535 ENSG00000176390.11 CRLF3 59873 1.25e-05 0.388129 4e-10 breast cancer 17_30887862 rs113934718 ENSG00000176390.11 CRLF3 63086 6.02e-06 0.409889 1e-08 breast cancer 17_30894259 rs62070652 ENSG00000176390.11 CRLF3 69483 6.02e-06 0.409889 6e-09 breast cancer 17_30894259 rs62070652 ENSG00000176390.11 CRLF3 69483 6.02e-06 0.409889 1e-06 breast cancer 17_45394123 rs4763 ENSG00000204650.14 LINC02210 -226205 3.58e-14 0.759507 2e-08 breast cancer 17_45394123 rs4763 ENSG00000214401.4 KANSL1-AS1 -799453 2.73e-11 0.822919 2e-08 breast cancer 17_45394123 rs4763 ENSG00000264070.1 DND1P1 -191748 1.74e-10 0.849713 2e-08 breast cancer 17_45394123 rs4763 ENSG00000262500.1 MAPK8IP1P1 -849483 9.17e-13 0.953082 2e-08 breast cancer 17_45394123 rs4763 ENSG00000225190.10 PLEKHM1 -96626 1.09e-05 0.366143 2e-08 breast cancer 17_45394123 rs4763 ENSG00000214425.7 LRRC37A4P -156212 3.19e-15 -0.964928 2e-08 breast cancer 17_45394123 rs4763 ENSG00000263503.1 MAPK8IP1P2 -208217 4.63e-14 1.02144 2e-08 breast cancer 17_45941122 rs62061734 ENSG00000225190.10 PLEKHM1 450373 2.33e-05 0.33325 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000185829.17 ARL17A -638560 2.43e-10 0.83385 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214425.7 LRRC37A4P 390787 1.14e-29 -1.14072 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000264070.1 DND1P1 355251 3.01e-16 0.968624 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000263503.1 MAPK8IP1P2 338782 2.49e-24 1.17796 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000204650.14 LINC02210 320794 3.13e-29 0.920995 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000176681.14 LRRC37A -351611 1.37e-07 0.715231 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000262500.1 MAPK8IP1P1 -302484 1.24e-18 1.0465 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000214401.4 KANSL1-AS1 -252454 6.4e-20 0.977893 8e-12 breast cancer 17_45941122 rs62061734 ENSG00000238083.7 LRRC37A2 -570389 5.35e-26 1.10909 8e-12 breast cancer 17_46751565 rs199533 ENSG00000214401.4 KANSL1-AS1 557989 2.81e-27 1.06906 5e-08 breast cancer 17_46751565 rs199533 ENSG00000185829.17 ARL17A 171883 5.74e-09 0.768886 5e-08 breast cancer 17_46751565 rs199533 ENSG00000238083.7 LRRC37A2 240054 1.43e-24 1.07773 5e-08 breast cancer 17_46751565 rs199533 ENSG00000262500.1 MAPK8IP1P1 507959 3.75e-21 1.08193 5e-08 breast cancer 17_46751565 rs199533 ENSG00000176681.14 LRRC37A 458832 1.09e-06 0.660183 5e-08 breast cancer 17_46788237 rs199498 ENSG00000238083.7 LRRC37A2 276726 7.9e-19 1.01195 2e-08 breast cancer 17_46788237 rs199498 ENSG00000262500.1 MAPK8IP1P1 544631 6.59e-17 1.02447 2e-08 breast cancer 17_46788237 rs199498 ENSG00000214401.4 KANSL1-AS1 594661 4.84e-16 0.915568 2e-08 breast cancer 17_46788237 rs199498 ENSG00000176681.14 LRRC37A 495504 1.33e-05 0.612654 2e-08 breast cancer 17_46788237 rs199498 ENSG00000185829.17 ARL17A 208555 9.98e-08 0.731642 2e-08 breast cancer 19_43484866 rs66849333 ENSG00000131126.18 TEX101 83370 2.13e-05 0.737043 1e-06 breast cancer 19_43779080 rs1685191 ENSG00000176222.8 ZNF404 -104971 1.55e-06 -0.350761 4e-20 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 1.05e-06 -0.346223 8e-09 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 1.05e-06 -0.346223 2e-14 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 1.05e-06 -0.346223 5e-08 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 1.05e-06 -0.346223 9e-07 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 1.05e-06 -0.346223 2e-10 breast cancer 19_43782361 rs3760982 ENSG00000176222.8 ZNF404 -101690 1.05e-06 -0.346223 1e-16 breast cancer 19_43919418 rs375066 ENSG00000176222.8 ZNF404 35367 1.55e-08 -0.413662 2e-14 breast cancer 19_51942133 rs8113308 ENSG00000269235.1 ZNF350-AS1 -7001 1.17e-06 0.772849 6e-07 breast cancer 2_201279205 rs10931936 ENSG00000155749.12 FLACC1 -78193 3.18e-05 -0.393608 6e-06 breast cancer 2_201288355 rs1035142 ENSG00000155749.12 FLACC1 -69043 1.76e-06 -0.380478 3e-09 breast cancer 2_201288502 rs700635 ENSG00000155749.12 FLACC1 -68896 3.18e-05 -0.393608 5e-16 breast cancer 21_46360308 rs9808759 ENSG00000182362.13 YBEY 73971 2.18e-05 -0.693906 4e-07 breast cancer 21_46360308 rs9808759 ENSG00000182362.13 YBEY 73971 2.18e-05 -0.693906 6e-09 breast cancer 3_150720263 rs59885616 ENSG00000169313.9 P2RY12 -664549 2.76e-05 -1.87895 4e-14 breast cancer 5_132466255 rs2522057 ENSG00000233006.6 MIR3936HG 96607 1.87e-08 -0.576931 3e-07 breast cancer 5_132466255 rs2522057 ENSG00000233006.6 MIR3936HG 96607 1.87e-08 -0.576931 1e-08 breast cancer 5_132466255 rs2522057 ENSG00000233006.6 MIR3936HG 96607 1.87e-08 -0.576931 9e-08 breast cancer 5_132497907 rs736801 ENSG00000233006.6 MIR3936HG 128259 9.9e-08 0.559936 8e-08 breast cancer 5_133071366 rs6596100 ENSG00000170606.14 HSPA4 19404 1.76e-05 0.402425 2e-08 breast cancer 5_133071366 rs6596100 ENSG00000170606.14 HSPA4 19404 1.76e-05 0.402425 8e-09 breast cancer 5_56977866 rs10036895 ENSG00000155542.11 SETD9 68606 6.58e-07 0.469679 2e-12 breast cancer 5_81972251 rs111549985 ENSG00000205464.11 ATP6AP1L -307211 1.21e-12 0.831553 6e-12 breast cancer 5_81972251 rs111549985 ENSG00000152348.15 ATG10 226 3.02e-07 0.597166 6e-12 breast cancer 5_81972251 rs111549985 ENSG00000186468.12 RPS23 -306326 5.48e-13 -0.615741 6e-12 breast cancer 5_82161539 rs2407064 ENSG00000205464.11 ATP6AP1L -117923 1.21e-12 -0.831553 3e-08 breast cancer 5_82161539 rs2407064 ENSG00000186468.12 RPS23 -117038 5.48e-13 0.615741 3e-08 breast cancer 5_82161539 rs2407064 ENSG00000152348.15 ATG10 189514 3.02e-07 -0.597166 3e-08 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 4.44e-07 -0.592971 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 9.13e-13 0.614556 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 2.96e-14 -0.880266 1e-12 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 4.44e-07 -0.592971 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 9.13e-13 0.614556 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 2.96e-14 -0.880266 2e-12 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 4.44e-07 -0.592971 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 9.13e-13 0.614556 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 2.96e-14 -0.880266 5e-11 breast cancer 5_82242227 rs7707921 ENSG00000152348.15 ATG10 270202 4.44e-07 -0.592971 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000186468.12 RPS23 -36350 9.13e-13 0.614556 4e-09 breast cancer 5_82242227 rs7707921 ENSG00000205464.11 ATP6AP1L -37235 2.96e-14 -0.880266 4e-09 breast cancer 5_82340549 rs2407156 ENSG00000205464.11 ATP6AP1L 61087 5.1e-13 0.746959 2e-06 breast cancer 5_82340549 rs2407156 ENSG00000186468.12 RPS23 61972 9.29e-14 -0.559769 2e-06 breast cancer 6_26175638 rs17598658 ENSG00000186470.13 BTN3A2 -189521 5.43e-08 -0.953771 2e-09 breast cancer 6_26463346 rs13195401 ENSG00000186470.13 BTN3A2 98187 7.94e-08 -0.862062 2e-09 breast cancer 6_26993501 rs34546498 ENSG00000186470.13 BTN3A2 628342 7.94e-08 -0.862062 9e-10 breast cancer 6_27307055 rs56114371 ENSG00000186470.13 BTN3A2 941896 7.94e-08 -0.862062 2e-09 breast cancer 6_31347004 rs115392158 ENSG00000204540.10 PSORS1C1 232254 9.77e-07 -0.694698 9e-06 breast cancer 6_31347004 rs115392158 ENSG00000204540.10 PSORS1C1 232254 9.77e-07 -0.694698 3e-07 breast cancer 6_32699696 rs147527678 ENSG00000204338.8 CYP21A1P 694007 9.8e-06 -0.564649 6e-08 breast cancer 6_32699696 rs147527678 ENSG00000204338.8 CYP21A1P 694007 9.8e-06 -0.564649 5e-07 breast cancer 6_33272092 rs17215231 ENSG00000231500.6 RPS18 44 2.65e-10 -0.646563 9e-13 breast cancer 7_74696373 rs74910854 ENSG00000196275.13 GTF2IRD2 -155178 7.52e-07 1.04063 5e-06 breast cancer 8_17926905 rs11779988 ENSG00000078674.17 PCM1 4065 7.68e-09 -0.505848 2e-06 breast cancer 9_104094512 rs4742903 ENSG00000136824.18 SMC2 252 1.55e-18 -0.655157 3e-08 breast cancer 9_104094512 rs4742903 ENSG00000136824.18 SMC2 252 1.55e-18 -0.655157 2e-07 breast cancer 9_133463535 rs3124765 ENSG00000148290.9 SURF1 106859 1.56e-06 0.446169 2e-06