DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	3.5e-06	0.410496	1e-06
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	3.5e-06	0.410496	3e-08
breast cancer	1_109637134	rs17024629	ENSG00000168765.16	GSTM4	-18947	3.5e-06	0.410496	1e-06
breast cancer	1_121121848	rs369304377	ENSG00000270231.3	NBPF8	685495	2e-09	0.354727	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000223345.3	H2BP1	4591	3.67e-12	0.700916	2e-29
breast cancer	1_121121848	rs369304377	ENSG00000270392.2	PFN1P2	687796	7.17e-06	0.41746	2e-29
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.66e-12	0.717937	2e-52
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.66e-12	0.717937	2e-26
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.66e-12	0.717937	3e-27
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.66e-12	0.717937	8e-54
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.66e-12	0.717937	5e-08
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.66e-12	0.717937	4e-20
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.66e-12	0.717937	9e-13
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.66e-12	0.717937	7e-10
breast cancer	1_121538815	rs11249433	ENSG00000223345.3	H2BP1	421558	6.66e-12	0.717937	8e-09
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	2.47e-05	0.377698	5e-09
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	2.47e-05	0.377698	8e-09
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	2.47e-05	0.377698	2e-07
breast cancer	1_145790097	rs12405132	ENSG00000186364.11	NUDT17	-55532	2.47e-05	0.377698	6e-10
breast cancer	1_155302483	rs7524950	ENSG00000225855.6	RUSC1-AS1	-19204	4.83e-07	0.284372	3e-09
breast cancer	1_155446537	rs10796944	ENSG00000225855.6	RUSC1-AS1	124850	1.46e-05	0.2587	7e-10
breast cancer	1_155587180	rs12091730	ENSG00000225855.6	RUSC1-AS1	265493	1.2e-05	0.266087	2e-10
breast cancer	1_155697170	rs348196	ENSG00000225855.6	RUSC1-AS1	375483	7.44e-06	0.278027	2e-08
breast cancer	1_16013277	rs1763604	ENSG00000186510.11	CLCNKA	-5598	3.47e-07	-0.417458	7e-09
breast cancer	1_168127440	rs60504827	ENSG00000143158.10	MPC2	190400	2.13e-07	-0.205454	2e-07
breast cancer	1_207903511	rs2724379	ENSG00000284237.1	LINC02767	-55781	1.18e-05	-0.340827	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000159596.6	TMEM69	231255	2.31e-05	0.364566	2e-07
breast cancer	1_45918469	rs12077974	ENSG00000070759.16	TESK2	427303	1.96e-05	0.265244	2e-07
breast cancer	10_121865675	rs10510102	ENSG00000226864.2	ATE1-AS1	-62637	5.98e-06	0.526274	2e-06
breast cancer	10_121904429	rs7899628	ENSG00000226864.2	ATE1-AS1	-23883	1.41e-12	-0.626324	9e-10
breast cancer	10_22681806	rs370356098	ENSG00000150867.13	PIP4K2A	-32749	3.44e-07	-0.335421	2e-07
breast cancer	10_27080233	rs7918232	ENSG00000120539.14	MASTL	-75034	3.6e-05	0.302503	8e-06
breast cancer	10_5752689	rs55910451	ENSG00000057608.16	GDI2	-89443	8.78e-08	-0.278254	4e-07
breast cancer	10_92172529	rs72807246	ENSG00000228701.1	TNKS2-DT	374238	4.64e-07	0.62583	3e-06
breast cancer	11_111636465	rs505372	ENSG00000137720.7	C11orf1	-242470	1.45e-06	0.264085	3e-06
breast cancer	11_111765903	rs643506	ENSG00000137713.15	PPP2R1B	-524	1.2e-12	-0.494835	2e-07
breast cancer	11_65935052	rs617791	ENSG00000172803.17	SNX32	101411	3.62e-05	-0.199766	7e-06
breast cancer	11_66301747	rs1783730	ENSG00000174165.7	ZDHHC24	-244491	2.22e-05	-0.276173	3e-07
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	2.42e-23	0.762731	3e-12
breast cancer	11_803017	rs6597981	ENSG00000255284.1	GATD1-DT	25439	2.42e-23	0.762731	1e-12
breast cancer	14_67599772	rs7149859	ENSG00000100564.8	PIGH	-515	2.37e-07	-0.34013	7e-07
breast cancer	15_50402109	rs4774565	ENSG00000244879.6	GABPB1-AS1	46700	6.96e-10	-0.433753	2e-06
breast cancer	15_50402109	rs4774565	ENSG00000104064.16	GABPB1	47151	4.89e-05	-0.203264	2e-06
breast cancer	15_74843920	rs6938	ENSG00000178802.17	MPI	-46085	1.66e-12	0.415293	9e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	6.95e-13	0.406284	5e-08
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	6.95e-13	0.406284	4e-07
breast cancer	15_74854991	rs1869959	ENSG00000178802.17	MPI	-35014	6.95e-13	0.406284	6e-08
breast cancer	15_75516399	rs8027365	ENSG00000140400.16	MAN2C1	148245	2.79e-14	0.371579	1e-07
breast cancer	15_79777420	rs166870	ENSG00000136371.10	MTHFS	-119959	4.66e-05	-0.303787	3e-07
breast cancer	15_90965985	rs77554484	ENSG00000166965.12	RCCD1	10189	5.09e-20	0.891414	1e-15
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	3.04e-09	0.52472	4e-08
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	3.04e-09	0.52472	2e-19
breast cancer	15_90968837	rs2290203	ENSG00000166965.12	RCCD1	13041	3.04e-09	0.52472	8e-10
breast cancer	16_56497273	rs2303282	ENSG00000125124.11	BBS2	-23010	2.03e-07	-0.263651	3e-07
breast cancer	17_30884649	rs7223535	ENSG00000108587.15	GOSR1	407287	2.77e-05	-0.256839	4e-10
breast cancer	17_30884649	rs7223535	ENSG00000176390.11	CRLF3	59873	1.65e-05	0.311523	4e-10
breast cancer	17_30884649	rs7223535	ENSG00000172171.10	TEFM	-22171	3.88e-05	0.366442	4e-10
breast cancer	17_30887862	rs113934718	ENSG00000172171.10	TEFM	-18958	3.24e-05	0.376373	1e-08
breast cancer	17_30887862	rs113934718	ENSG00000176390.11	CRLF3	63086	2.97e-05	0.307857	1e-08
breast cancer	17_30887862	rs113934718	ENSG00000108587.15	GOSR1	410500	3.8e-05	-0.257084	1e-08
breast cancer	17_30894259	rs62070652	ENSG00000176390.11	CRLF3	69483	2.97e-05	0.307857	6e-09
breast cancer	17_30894259	rs62070652	ENSG00000172171.10	TEFM	-12561	3.24e-05	0.376373	6e-09
breast cancer	17_30894259	rs62070652	ENSG00000108587.15	GOSR1	416897	3.8e-05	-0.257084	6e-09
breast cancer	17_30894259	rs62070652	ENSG00000176390.11	CRLF3	69483	2.97e-05	0.307857	1e-06
breast cancer	17_30894259	rs62070652	ENSG00000172171.10	TEFM	-12561	3.24e-05	0.376373	1e-06
breast cancer	17_30894259	rs62070652	ENSG00000108587.15	GOSR1	416897	3.8e-05	-0.257084	1e-06
breast cancer	17_45394123	rs4763	ENSG00000264589.2	MAPT-AS1	-501507	4.05e-09	-0.595479	2e-08
breast cancer	17_45394123	rs4763	ENSG00000264070.1	DND1P1	-191748	1.98e-13	0.849391	2e-08
breast cancer	17_45394123	rs4763	ENSG00000159314.11	ARHGAP27	-40298	1.09e-05	0.197593	2e-08
breast cancer	17_45394123	rs4763	ENSG00000176681.14	LRRC37A	-898610	1.24e-06	0.608879	2e-08
breast cancer	17_45394123	rs4763	ENSG00000204650.14	LINC02210	-226205	2.62e-19	0.749978	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214401.4	KANSL1-AS1	-799453	3.61e-17	0.926481	2e-08
breast cancer	17_45394123	rs4763	ENSG00000262500.1	MAPK8IP1P1	-849483	2.9e-16	0.953632	2e-08
breast cancer	17_45394123	rs4763	ENSG00000263503.1	MAPK8IP1P2	-208217	8.11e-15	0.924013	2e-08
breast cancer	17_45394123	rs4763	ENSG00000214425.7	LRRC37A4P	-156212	2.23e-24	-0.887507	2e-08
breast cancer	17_45394123	rs4763	ENSG00000225190.10	PLEKHM1	-96626	2.73e-09	0.360514	2e-08
breast cancer	17_45941122	rs62061734	ENSG00000120088.14	CRHR1	156842	8.1e-05	-0.263178	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000159314.11	ARHGAP27	506701	1.16e-07	0.222011	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000225190.10	PLEKHM1	450373	2.46e-07	0.29993	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214425.7	LRRC37A4P	390787	9.48e-43	-1.00563	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000264070.1	DND1P1	355251	1.56e-23	1.02003	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000214401.4	KANSL1-AS1	-252454	2.45e-32	1.114	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000204650.14	LINC02210	320794	4.75e-31	0.846779	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000185829.17	ARL17A	-638560	4.62e-16	0.834403	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000264589.2	MAPT-AS1	45492	8.44e-11	-0.614178	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000262500.1	MAPK8IP1P1	-302484	2.45e-30	1.14964	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000238083.7	LRRC37A2	-570389	5.61e-36	1.18858	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000263503.1	MAPK8IP1P2	338782	2.32e-24	1.0743	8e-12
breast cancer	17_45941122	rs62061734	ENSG00000176681.14	LRRC37A	-351611	6.68e-10	0.716258	8e-12
breast cancer	17_46751565	rs199533	ENSG00000262500.1	MAPK8IP1P1	507959	1.43e-32	1.14671	5e-08
breast cancer	17_46751565	rs199533	ENSG00000238083.7	LRRC37A2	240054	4.23e-38	1.17802	5e-08
breast cancer	17_46751565	rs199533	ENSG00000214401.4	KANSL1-AS1	557989	4.12e-42	1.17389	5e-08
breast cancer	17_46751565	rs199533	ENSG00000186868.15	MAPT	857183	4.18e-05	0.239302	5e-08
breast cancer	17_46751565	rs199533	ENSG00000264589.2	MAPT-AS1	855935	8.53e-10	-0.569497	5e-08
breast cancer	17_46751565	rs199533	ENSG00000185829.17	ARL17A	171883	1.02e-16	0.827488	5e-08
breast cancer	17_46751565	rs199533	ENSG00000120088.14	CRHR1	967285	4.68e-05	-0.264458	5e-08
breast cancer	17_46751565	rs199533	ENSG00000176681.14	LRRC37A	458832	1.97e-09	0.680643	5e-08
breast cancer	17_46788237	rs199498	ENSG00000176681.14	LRRC37A	495504	1.38e-08	0.674094	2e-08
breast cancer	17_46788237	rs199498	ENSG00000185829.17	ARL17A	208555	3.79e-15	0.824373	2e-08
breast cancer	17_46788237	rs199498	ENSG00000238083.7	LRRC37A2	276726	1.52e-26	1.08994	2e-08
breast cancer	17_46788237	rs199498	ENSG00000262500.1	MAPK8IP1P1	544631	1.7e-22	1.04622	2e-08
breast cancer	17_46788237	rs199498	ENSG00000264589.2	MAPT-AS1	892607	1.41e-08	-0.552771	2e-08
breast cancer	17_46788237	rs199498	ENSG00000214401.4	KANSL1-AS1	594661	3.59e-25	1.03591	2e-08
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	1.18e-06	-0.259788	1e-08
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	1.18e-06	-0.259788	8e-09
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	1.18e-06	-0.259788	2e-13
breast cancer	17_54979110	rs6504950	ENSG00000141198.14	TOM1L1	79723	1.18e-06	-0.259788	5e-12
breast cancer	17_55135212	rs2628317	ENSG00000141198.14	TOM1L1	235825	6.39e-05	-0.229256	4e-16
breast cancer	17_68904663	rs36059695	ENSG00000141338.13	ABCA8	-50729	1.8e-11	1.12702	6e-08
breast cancer	17_82946434	rs898097	ENSG00000141560.14	FN3KRP	229751	1.03e-06	-0.342129	2e-06
breast cancer	18_26920652	rs232320	ENSG00000260372.6	AQP4-AS1	264910	1.4e-07	-0.463938	6e-09
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.21e-06	-0.260073	7e-21
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.66e-06	0.397313	7e-21
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.21e-06	-0.260073	4e-13
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.66e-06	0.397313	4e-13
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.21e-06	-0.260073	2e-09
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.66e-06	0.397313	2e-09
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.21e-06	-0.260073	1e-12
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.66e-06	0.397313	1e-12
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.21e-06	-0.260073	9e-13
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.66e-06	0.397313	9e-13
breast cancer	19_17278895	rs8170	ENSG00000130312.6	MRPL34	-13937	4.21e-06	-0.260073	2e-06
breast cancer	19_17278895	rs8170	ENSG00000160117.14	ANKLE1	-2750	3.66e-06	0.397313	2e-06
breast cancer	19_17282085	rs8100241	ENSG00000130312.6	MRPL34	-10747	1.82e-05	0.189603	4e-08
breast cancer	19_19417997	rs1469713	ENSG00000160161.9	CILP2	-120251	2.01e-05	0.273638	1e-10
breast cancer	19_19434887	rs2965183	ENSG00000160161.9	CILP2	-103361	1.06e-05	0.285229	1e-11
breast cancer	19_19434887	rs2965183	ENSG00000160161.9	CILP2	-103361	1.06e-05	0.285229	6e-12
breast cancer	19_19535463	rs2304098	ENSG00000160161.9	CILP2	-2785	6.03e-06	0.290743	2e-11
breast cancer	19_43779080	rs1685191	ENSG00000176222.8	ZNF404	-104971	9.74e-07	-0.344624	4e-20
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	3.33e-10	-0.431693	2e-14
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	3.33e-10	-0.431693	8e-09
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	3.33e-10	-0.431693	5e-08
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	3.33e-10	-0.431693	9e-07
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	3.33e-10	-0.431693	1e-16
breast cancer	19_43782361	rs3760982	ENSG00000176222.8	ZNF404	-101690	3.33e-10	-0.431693	2e-10
breast cancer	19_43919418	rs375066	ENSG00000267191.1	ZNF45-AS1	17417	1.61e-05	-0.458498	2e-14
breast cancer	19_43919418	rs375066	ENSG00000176222.8	ZNF404	35367	1.49e-18	-0.552121	2e-14
breast cancer	19_51869723	rs10411161	ENSG00000198093.10	ZNF649	-35317	1.12e-07	-0.514754	7e-06
breast cancer	19_51942133	rs8113308	ENSG00000269235.1	ZNF350-AS1	-7001	4.04e-12	0.694393	6e-07
breast cancer	2_171513371	rs11680449	ENSG00000071967.11	CYBRD1	-8876	6.62e-05	0.200518	4e-09
breast cancer	2_171568284	rs11675683	ENSG00000071967.11	CYBRD1	46037	1.9e-07	0.239854	4e-08
breast cancer	2_201258707	rs3769821	ENSG00000155749.12	FLACC1	-98691	1.88e-13	-0.380577	4e-18
breast cancer	2_201279205	rs10931936	ENSG00000155749.12	FLACC1	-78193	1.14e-13	-0.41419	6e-06
breast cancer	2_201288355	rs1035142	ENSG00000155749.12	FLACC1	-69043	7.39e-24	-0.474304	3e-09
breast cancer	2_201288502	rs700635	ENSG00000155749.12	FLACC1	-68896	8.86e-14	-0.41703	5e-16
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.75e-12	-0.400205	9e-14
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.75e-12	-0.400205	7e-07
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.75e-12	-0.400205	2e-16
breast cancer	2_201316524	rs1830298	ENSG00000155749.12	FLACC1	-40874	1.75e-12	-0.400205	6e-24
breast cancer	2_201384985	rs2714486	ENSG00000155749.12	FLACC1	27587	9.84e-06	0.31448	7e-10
breast cancer	2_24906604	rs6725517	ENSG00000138031.14	ADCY3	-13235	1.78e-06	-0.189637	5e-11
breast cancer	2_24906604	rs6725517	ENSG00000138031.14	ADCY3	-13235	1.78e-06	-0.189637	3e-12
breast cancer	2_25068670	rs1971136	ENSG00000138031.14	ADCY3	148831	2.34e-05	0.165259	5e-09
breast cancer	2_25068670	rs1971136	ENSG00000224165.5	DNAJC27-AS1	97280	5.31e-07	0.302039	5e-09
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	4.06e-05	0.37274	5e-09
breast cancer	2_28896719	rs67073037	ENSG00000171103.10	TRMT61B	26418	4.06e-05	0.37274	3e-06
breast cancer	2_69900097	rs6716937	ENSG00000124380.10	SNRNP27	6537	3.25e-09	-0.326199	4e-07
breast cancer	2_69945455	rs6756513	ENSG00000087338.4	GMCL1	115813	2.6e-06	-0.292453	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	1.61e-12	-0.984742	6e-09
breast cancer	21_46360308	rs9808759	ENSG00000160282.13	FTCD	204741	1.39e-05	-0.493845	6e-09
breast cancer	21_46360308	rs9808759	ENSG00000182362.13	YBEY	73971	1.61e-12	-0.984742	4e-07
breast cancer	21_46360308	rs9808759	ENSG00000160282.13	FTCD	204741	1.39e-05	-0.493845	4e-07
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	1.64e-05	-0.647681	9e-14
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	1.64e-05	-0.647681	3e-17
breast cancer	22_38962032	rs12628403	ENSG00000179750.15	APOBEC3B	-20315	1.64e-05	-0.647681	4e-06
breast cancer	3_155285814	rs4679741	ENSG00000240045.1	STRIT1	-7877	1.5e-07	-0.4326	2e-07
breast cancer	4_105435604	rs77928427	ENSG00000138777.19	PPA2	-38477	2.39e-06	-0.26638	3e-08
breast cancer	5_124400713	rs6878727	ENSG00000253807.5	LINC01170	-4366	2.24e-05	-0.324974	6e-06
breast cancer	5_128098106	rs1112956	ENSG00000245937.7	SLC12A2-DT	14934	7.46e-12	0.430091	9e-06
breast cancer	5_128227188	rs36715	ENSG00000245937.7	SLC12A2-DT	144016	1.12e-05	0.250375	4e-06
breast cancer	5_132304843	rs6860806	ENSG00000233006.6	MIR3936HG	-64805	1.88e-07	0.480982	8e-08
breast cancer	5_132304843	rs6860806	ENSG00000233006.6	MIR3936HG	-64805	1.88e-07	0.480982	3e-08
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	2.55e-09	-0.580975	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	5.3e-05	-0.225033	3e-07
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	2.55e-09	-0.580975	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	5.3e-05	-0.225033	1e-08
breast cancer	5_132466255	rs2522057	ENSG00000233006.6	MIR3936HG	96607	2.55e-09	-0.580975	9e-08
breast cancer	5_132466255	rs2522057	ENSG00000197536.11	IRF1-AS1	55619	5.3e-05	-0.225033	9e-08
breast cancer	5_132497907	rs736801	ENSG00000197536.11	IRF1-AS1	87271	6.55e-05	0.226121	8e-08
breast cancer	5_132497907	rs736801	ENSG00000233006.6	MIR3936HG	128259	5.01e-08	0.545327	8e-08
breast cancer	5_133071366	rs6596100	ENSG00000170606.14	HSPA4	19404	4.91e-08	0.322051	8e-09
breast cancer	5_133071366	rs6596100	ENSG00000170606.14	HSPA4	19404	4.91e-08	0.322051	2e-08
breast cancer	5_154976135	rs6890610	ENSG00000155508.13	CNOT8	118582	2.17e-05	-0.238179	6e-06
breast cancer	5_56977866	rs10036895	ENSG00000155542.11	SETD9	68606	2.29e-06	0.391731	2e-12
breast cancer	5_81972251	rs111549985	ENSG00000205464.11	ATP6AP1L	-307211	1.51e-18	0.641102	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000186468.12	RPS23	-306326	5.64e-26	-0.682031	6e-12
breast cancer	5_81972251	rs111549985	ENSG00000152348.15	ATG10	226	3.26e-14	0.724055	6e-12
breast cancer	5_82161539	rs2407064	ENSG00000152348.15	ATG10	189514	1.04e-12	-0.686912	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000205464.11	ATP6AP1L	-117923	1.14e-21	-0.682906	3e-08
breast cancer	5_82161539	rs2407064	ENSG00000186468.12	RPS23	-117038	1.57e-26	0.687136	3e-08
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.59e-27	0.690197	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.58e-12	-0.676288	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	6.87e-23	-0.691636	4e-09
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.59e-27	0.690197	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.58e-12	-0.676288	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	6.87e-23	-0.691636	2e-12
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.59e-27	0.690197	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.58e-12	-0.676288	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	6.87e-23	-0.691636	5e-11
breast cancer	5_82242227	rs7707921	ENSG00000186468.12	RPS23	-36350	1.59e-27	0.690197	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000152348.15	ATG10	270202	1.58e-12	-0.676288	1e-12
breast cancer	5_82242227	rs7707921	ENSG00000205464.11	ATP6AP1L	-37235	6.87e-23	-0.691636	1e-12
breast cancer	5_82340549	rs2407156	ENSG00000186468.12	RPS23	61972	4.49e-22	-0.592539	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000205464.11	ATP6AP1L	61087	4.13e-20	0.612441	2e-06
breast cancer	5_82340549	rs2407156	ENSG00000152348.15	ATG10	368524	6.52e-08	0.497885	2e-06
breast cancer	6_25710343	rs68006638	ENSG00000186470.13	BTN3A2	-654816	4.24e-06	-0.819231	2e-07
breast cancer	6_25874195	rs13198474	ENSG00000186470.13	BTN3A2	-490964	8.24e-07	-0.875116	2e-07
breast cancer	6_26175638	rs17598658	ENSG00000186470.13	BTN3A2	-189521	6.54e-12	-1.02799	2e-09
breast cancer	6_26463346	rs13195401	ENSG00000186470.13	BTN3A2	98187	1.1e-12	-1.00853	2e-09
breast cancer	6_26993501	rs34546498	ENSG00000186470.13	BTN3A2	628342	1.1e-12	-1.00853	9e-10
breast cancer	6_27307055	rs56114371	ENSG00000219392.1	ZNF602P	-808573	5.69e-07	-0.736919	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000197062.11	ZSCAN26	-959955	1.34e-06	-0.549661	2e-09
breast cancer	6_27307055	rs56114371	ENSG00000186470.13	BTN3A2	941896	1.1e-12	-1.00853	2e-09
breast cancer	6_27457865	rs34196306	ENSG00000219392.1	ZNF602P	-657763	3.91e-07	-0.749323	1e-09
breast cancer	6_27457865	rs34196306	ENSG00000197062.11	ZSCAN26	-809145	1.56e-06	-0.548417	1e-09
breast cancer	6_27873148	rs45509595	ENSG00000197062.11	ZSCAN26	-393862	2.23e-06	-0.529136	5e-09
breast cancer	6_27873148	rs45509595	ENSG00000219392.1	ZNF602P	-242480	1.4e-06	-0.699963	5e-09
breast cancer	6_28106103	rs34662244	ENSG00000216901.1	ZNF603P	-70085	0.000189215	0.709088	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000219392.1	ZNF602P	-9525	2.39e-06	-0.677126	3e-09
breast cancer	6_28106103	rs34662244	ENSG00000197062.11	ZSCAN26	-160907	1.29e-06	-0.53394	3e-09
breast cancer	6_28364364	rs13214023	ENSG00000197062.11	ZSCAN26	97354	1.29e-06	-0.53394	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000219392.1	ZNF602P	248736	2.39e-06	-0.677126	1e-09
breast cancer	6_28364364	rs13214023	ENSG00000216901.1	ZNF603P	188176	0.000189215	0.709088	1e-09
breast cancer	6_28958443	rs9257408	ENSG00000189298.13	ZKSCAN3	608529	2.35e-05	-0.299712	3e-07
breast cancer	6_28958443	rs9257408	ENSG00000189298.13	ZKSCAN3	608529	2.35e-05	-0.299712	5e-08
breast cancer	6_28958443	rs9257408	ENSG00000189298.13	ZKSCAN3	608529	2.35e-05	-0.299712	7e-08
breast cancer	6_28958443	rs9257408	ENSG00000189298.13	ZKSCAN3	608529	2.35e-05	-0.299712	5e-07
breast cancer	6_29280372	rs3130834	ENSG00000270604.5	HCG17	-974092	2.37e-07	-0.8336	5e-09
breast cancer	6_29388554	rs9257809	ENSG00000270604.5	HCG17	-865910	1.77e-07	-0.810673	3e-08
breast cancer	6_29693039	rs3116813	ENSG00000270604.5	HCG17	-561425	3.43e-06	-0.74425	6e-07
breast cancer	6_29785031	rs147680653	ENSG00000270604.5	HCG17	-469433	6.09e-07	-0.788969	1e-06
breast cancer	6_29785031	rs147680653	ENSG00000137312.14	FLOT1	-957702	1.92e-05	0.357337	1e-06
breast cancer	6_29882943	rs1611579	ENSG00000270604.5	HCG17	-371521	1.1e-06	-0.75675	8e-07
breast cancer	6_29882943	rs1611579	ENSG00000137312.14	FLOT1	-859790	4.32e-05	0.335997	8e-07
breast cancer	6_30003183	rs3094146	ENSG00000137312.14	FLOT1	-739550	4.32e-05	0.335997	7e-07
breast cancer	6_30003183	rs3094146	ENSG00000270604.5	HCG17	-251281	1.1e-06	-0.75675	7e-07
breast cancer	6_30365728	rs3094054	ENSG00000270604.5	HCG17	111264	1.63e-06	-0.755882	1e-07
breast cancer	6_30365728	rs3094054	ENSG00000137312.14	FLOT1	-377005	3.19e-06	0.384975	1e-07
breast cancer	6_30374976	rs115707823	ENSG00000270604.5	HCG17	120512	4.62e-08	-0.774026	2e-06
breast cancer	6_30374976	rs115707823	ENSG00000270604.5	HCG17	120512	4.62e-08	-0.774026	5e-07
breast cancer	6_30473526	rs3132615	ENSG00000270604.5	HCG17	219062	2.71e-07	-0.763756	2e-06
breast cancer	6_30473526	rs3132615	ENSG00000137312.14	FLOT1	-269207	3.32e-06	0.364036	2e-06
breast cancer	6_30576624	rs3132610	ENSG00000270604.5	HCG17	322160	1.22e-06	-0.719205	1e-06
breast cancer	6_30576624	rs3132610	ENSG00000137312.14	FLOT1	-166109	6.36e-07	0.385408	1e-06
breast cancer	6_30682249	rs9262142	ENSG00000137312.14	FLOT1	-60484	8.14e-07	0.38622	3e-06
breast cancer	6_30682249	rs9262142	ENSG00000270604.5	HCG17	427785	5.02e-07	-0.751184	3e-06
breast cancer	6_30793795	rs3129984	ENSG00000270604.5	HCG17	539331	1.38e-07	-0.763695	8e-06
breast cancer	6_30793795	rs3129984	ENSG00000137312.14	FLOT1	51062	8.96e-06	0.341138	8e-06
breast cancer	6_31347004	rs115392158	ENSG00000204540.10	PSORS1C1	232254	3.33e-06	-0.617438	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204338.8	CYP21A1P	-658685	4.86e-05	-0.495249	3e-07
breast cancer	6_31347004	rs115392158	ENSG00000204540.10	PSORS1C1	232254	3.33e-06	-0.617438	9e-06
breast cancer	6_31347004	rs115392158	ENSG00000204338.8	CYP21A1P	-658685	4.86e-05	-0.495249	9e-06
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	1.58e-07	-0.539891	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000231852.6	CYP21A2	661431	8.15e-05	0.416828	5e-07
breast cancer	6_32699696	rs147527678	ENSG00000179344.16	HLA-DQB1	31313	1.58e-07	-0.539891	6e-08
breast cancer	6_32699696	rs147527678	ENSG00000231852.6	CYP21A2	661431	8.15e-05	0.416828	6e-08
breast cancer	6_33272092	rs17215231	ENSG00000231500.6	RPS18	44	1.14e-32	-0.780408	9e-13
breast cancer	6_43259403	rs111342015	ENSG00000112659.13	CUL9	77228	7.54e-06	-0.339267	9e-08
breast cancer	7_144351809	rs62485509	ENSG00000050327.14	ARHGEF5	-3479	4.87e-08	0.438607	4e-12
breast cancer	7_144377836	rs720475	ENSG00000050327.14	ARHGEF5	22548	1.02e-12	0.472471	1e-11
breast cancer	7_144377836	rs720475	ENSG00000050327.14	ARHGEF5	22548	1.02e-12	0.472471	1e-08
breast cancer	7_144377836	rs720475	ENSG00000050327.14	ARHGEF5	22548	1.02e-12	0.472471	7e-12
breast cancer	7_144377836	rs720475	ENSG00000050327.14	ARHGEF5	22548	1.02e-12	0.472471	2e-11
breast cancer	7_144377836	rs720475	ENSG00000050327.14	ARHGEF5	22548	1.02e-12	0.472471	4e-10
breast cancer	7_144377836	rs720475	ENSG00000050327.14	ARHGEF5	22548	1.02e-12	0.472471	7e-11
breast cancer	7_144477198	rs13230714	ENSG00000050327.14	ARHGEF5	121910	2.88e-07	0.320259	1e-06
breast cancer	7_74696373	rs74910854	ENSG00000123965.13	PMS2P5	-197743	3.76e-07	0.900788	5e-06
breast cancer	7_74696373	rs74910854	ENSG00000196275.13	GTF2IRD2	-155178	5.5e-09	0.716331	5e-06
breast cancer	8_117869627	rs10103490	ENSG00000182197.10	EXT1	-242226	1.45e-05	0.321575	4e-06
breast cancer	8_17926905	rs11779988	ENSG00000078674.17	PCM1	4065	1.13e-14	-0.568535	2e-06
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	4.08e-06	0.504299	1e-08
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	4.08e-06	0.504299	6e-09
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	4.08e-06	0.504299	3e-08
breast cancer	8_220692	rs66823261	ENSG00000223508.5	RPL23AP53	-11444	4.08e-06	0.504299	3e-07
breast cancer	9_103912867	rs718857	ENSG00000136824.18	SMC2	-181393	1.16e-10	-0.420967	2e-06
breast cancer	9_104094512	rs4742903	ENSG00000136824.18	SMC2	252	1.97e-28	-0.672856	2e-07
breast cancer	9_104094512	rs4742903	ENSG00000136824.18	SMC2	252	1.97e-28	-0.672856	3e-08
breast cancer	9_133463535	rs3124765	ENSG00000148290.9	SURF1	106859	6.21e-09	0.522766	2e-06