DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
rheumatoid arthritis	1_113891324	rs1217393	ENSG00000134262.12	AP4B1	-13816	2.14e-11	-0.348981	5e-09
rheumatoid arthritis	1_17087404	rs761426	ENSG00000159363.17	ATP13A2	75476	4.77e-05	-0.169973	2e-10
rheumatoid arthritis	1_17087404	rs761426	ENSG00000159363.17	ATP13A2	75476	4.77e-05	-0.169973	1e-06
rheumatoid arthritis	1_2552522	rs2258734	ENSG00000157873.17	TNFRSF14	-4175	3.31e-07	0.396047	6e-14
rheumatoid arthritis	1_2552522	rs2258734	ENSG00000215912.12	TTC34	-249195	1.25e-11	0.394277	6e-14
rheumatoid arthritis	1_2552522	rs2258734	ENSG00000157870.14	PRXL2B	-33969	2.32e-05	-0.265275	6e-14
rheumatoid arthritis	1_2569783	rs10797431	ENSG00000157873.17	TNFRSF14	13086	7.97e-08	0.401255	1e-08
rheumatoid arthritis	1_2569783	rs10797431	ENSG00000157870.14	PRXL2B	-16708	1.72e-06	-0.28798	1e-08
rheumatoid arthritis	1_2569783	rs10797431	ENSG00000215912.12	TTC34	-231934	2.23e-10	0.360109	1e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000215912.12	TTC34	-205023	1.82e-13	-0.417152	4e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000157870.14	PRXL2B	10203	3.6e-05	0.255452	4e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000157873.17	TNFRSF14	39997	1.21e-07	-0.40326	4e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000215912.12	TTC34	-205023	1.82e-13	-0.417152	7e-10
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000157870.14	PRXL2B	10203	3.6e-05	0.255452	7e-10
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000157873.17	TNFRSF14	39997	1.21e-07	-0.40326	7e-10
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000215912.12	TTC34	-205023	1.82e-13	-0.417152	7e-12
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000157870.14	PRXL2B	10203	3.6e-05	0.255452	7e-12
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000157873.17	TNFRSF14	39997	1.21e-07	-0.40326	7e-12
rheumatoid arthritis	1_2603539	rs6664969	ENSG00000157873.17	TNFRSF14	46842	1.58e-07	0.403204	1e-08
rheumatoid arthritis	1_2603539	rs6664969	ENSG00000215912.12	TTC34	-198178	1.28e-12	0.40766	1e-08
rheumatoid arthritis	1_2608357	rs4073285	ENSG00000157873.17	TNFRSF14	51660	1.51e-07	0.402436	2e-13
rheumatoid arthritis	1_2608357	rs4073285	ENSG00000215912.12	TTC34	-193360	4.51e-13	0.413254	2e-13
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157870.14	PRXL2B	35694	2.21e-05	-0.263204	2e-08
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	4.84e-13	0.412797	2e-08
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157873.17	TNFRSF14	65488	1.03e-07	0.407276	2e-08
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157870.14	PRXL2B	35694	2.21e-05	-0.263204	4e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	4.84e-13	0.412797	4e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157873.17	TNFRSF14	65488	1.03e-07	0.407276	4e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157870.14	PRXL2B	35694	2.21e-05	-0.263204	1e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	4.84e-13	0.412797	1e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157873.17	TNFRSF14	65488	1.03e-07	0.407276	1e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157870.14	PRXL2B	35694	2.21e-05	-0.263204	1e-07
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	4.84e-13	0.412797	1e-07
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157873.17	TNFRSF14	65488	1.03e-07	0.407276	1e-07
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	8.9e-17	0.802676	2e-11
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	8.9e-17	0.802676	3e-12
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	8.9e-17	0.802676	6e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	8.9e-17	0.802676	5e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	8.9e-17	0.802676	6e-12
rheumatoid arthritis	11_118741072	rs10892279	ENSG00000019144.18	PHLDB1	134632	7.72e-11	0.441259	3e-08
rheumatoid arthritis	11_118741072	rs10892279	ENSG00000019144.18	PHLDB1	134632	7.72e-11	0.441259	1e-10
rheumatoid arthritis	11_118806377	rs11217037	ENSG00000019144.18	PHLDB1	199937	1.99e-10	0.440869	1e-12
rheumatoid arthritis	11_118809939	rs11217040	ENSG00000019144.18	PHLDB1	203499	4.18e-10	0.437066	2e-11
rheumatoid arthritis	11_118858682	rs10790268	ENSG00000019144.18	PHLDB1	252242	1.54e-08	-0.372956	1e-15
rheumatoid arthritis	11_118858682	rs10790268	ENSG00000019144.18	PHLDB1	252242	1.54e-08	-0.372956	1e-17
rheumatoid arthritis	11_118858682	rs10790268	ENSG00000019144.18	PHLDB1	252242	1.54e-08	-0.372956	3e-15
rheumatoid arthritis	11_118858682	rs10790268	ENSG00000019144.18	PHLDB1	252242	1.54e-08	-0.372956	1e-13
rheumatoid arthritis	11_118871133	rs4938573	ENSG00000019144.18	PHLDB1	264693	1.19e-07	-0.344314	5e-07
rheumatoid arthritis	11_609888	rs12421158	ENSG00000070047.11	PHRF1	33402	4.85e-05	0.214868	4e-06
rheumatoid arthritis	11_61138978	rs508970	ENSG00000110448.10	CD5	36583	6e-17	-0.738892	3e-06
rheumatoid arthritis	11_61138978	rs508970	ENSG00000110448.10	CD5	36583	6e-17	-0.738892	4e-06
rheumatoid arthritis	11_61142109	rs595158	ENSG00000110448.10	CD5	39714	5.2e-14	-0.656613	6e-06
rheumatoid arthritis	11_61142109	rs595158	ENSG00000110448.10	CD5	39714	5.2e-14	-0.656613	3e-08
rheumatoid arthritis	11_61142109	rs595158	ENSG00000110448.10	CD5	39714	5.2e-14	-0.656613	6e-06
rheumatoid arthritis	11_61822009	rs28456	ENSG00000221968.8	FADS3	-70042	4.63e-11	-0.36707	4e-06
rheumatoid arthritis	11_61822009	rs28456	ENSG00000149485.18	FADS1	-7309	1.29e-27	-0.778272	4e-06
rheumatoid arthritis	11_61828092	rs968567	ENSG00000221968.8	FADS3	-63959	2.21e-06	-0.38443	7e-07
rheumatoid arthritis	11_61828092	rs968567	ENSG00000149485.18	FADS1	-1226	2.17e-14	-0.837309	7e-07
rheumatoid arthritis	11_61828092	rs968567	ENSG00000221968.8	FADS3	-63959	2.21e-06	-0.38443	2e-08
rheumatoid arthritis	11_61828092	rs968567	ENSG00000149485.18	FADS1	-1226	2.17e-14	-0.837309	2e-08
rheumatoid arthritis	11_633689	rs7929541	ENSG00000174775.16	HRAS	96402	3.06e-05	-0.170011	2e-10
rheumatoid arthritis	11_633689	rs7929541	ENSG00000254815.5	LMNTD2-AS1	76048	1.73e-05	0.27676	2e-10
rheumatoid arthritis	11_633689	rs7929541	ENSG00000185522.8	LMNTD2	72910	6.28e-05	0.221843	2e-10
rheumatoid arthritis	11_633689	rs7929541	ENSG00000177042.14	TMEM80	-61844	2.6e-09	0.495339	2e-10
rheumatoid arthritis	11_633689	rs7929541	ENSG00000177106.14	EPS8L2	-60749	3.12e-08	0.479584	2e-10
rheumatoid arthritis	11_64275525	rs660442	ENSG00000168071.21	CCDC88B	-64698	7.47e-10	-0.697382	1e-09
rheumatoid arthritis	11_72662452	rs3781913	ENSG00000186642.15	PDE2A	-12139	5.79e-10	0.448239	6e-10
rheumatoid arthritis	12_48021974	rs4760609	ENSG00000177981.10	ASB8	-159239	8.17e-10	0.383953	3e-12
rheumatoid arthritis	12_48021974	rs4760609	ENSG00000187166.1	H1-7	-307006	0.000112691	0.302124	3e-12
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	4.79e-29	-0.606588	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.92e-43	0.96807	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	4.79e-29	-0.606588	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.92e-43	0.96807	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	4.79e-29	-0.606588	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.92e-43	0.96807	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	4.79e-29	-0.606588	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.92e-43	0.96807	2e-08
rheumatoid arthritis	12_57574932	rs1678542	ENSG00000123427.16	EEF1AKMT3	-196674	2.03e-05	0.351795	1e-07
rheumatoid arthritis	12_57574932	rs1678542	ENSG00000123427.16	EEF1AKMT3	-196674	2.03e-05	0.351795	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	6.09e-05	-0.253032	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	7.22e-18	-0.60127	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000135452.9	TSPAN31	-25467	7.79e-06	0.231802	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	6.09e-05	-0.253032	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	7.22e-18	-0.60127	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000135452.9	TSPAN31	-25467	7.79e-06	0.231802	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	6.09e-05	-0.253032	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	7.22e-18	-0.60127	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000135452.9	TSPAN31	-25467	7.79e-06	0.231802	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	6.09e-05	-0.253032	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	7.22e-18	-0.60127	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000135452.9	TSPAN31	-25467	7.79e-06	0.231802	1e-07
rheumatoid arthritis	13_39760715	rs9603612	ENSG00000133103.16	COG6	105088	6.42e-05	0.184168	3e-13
rheumatoid arthritis	13_39776775	rs7993214	ENSG00000133103.16	COG6	121148	6.47e-05	-0.181346	5e-06
rheumatoid arthritis	14_104919812	rs2841269	ENSG00000185567.6	AHNAK2	-58545	1.98e-05	-0.21787	2e-16
rheumatoid arthritis	14_104919812	rs2841269	ENSG00000140104.13	CLBA1	-65963	6.57e-08	0.352824	2e-16
rheumatoid arthritis	14_104924668	rs2841277	ENSG00000140104.13	CLBA1	-61107	1.55e-08	0.38225	2e-14
rheumatoid arthritis	14_104924668	rs2841277	ENSG00000185567.6	AHNAK2	-53689	1.87e-07	-0.272903	2e-14
rheumatoid arthritis	14_54881400	rs3783637	ENSG00000131979.18	GCH1	-21452	4.5e-09	-0.617695	2e-06
rheumatoid arthritis	15_90350436	rs6496667	ENSG00000140575.12	IQGAP1	-37782	1.37e-20	0.793792	1e-06
rheumatoid arthritis	15_90483245	rs8040585	ENSG00000259262.1	NDUFA3P4	97431	2.42e-05	0.357067	2e-08
rheumatoid arthritis	15_90483245	rs8040585	ENSG00000140575.12	IQGAP1	95027	5.78e-11	0.457499	2e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000178226.10	PRSS36	-534799	5.86e-09	0.590529	3e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000103549.21	RNF40	-147823	2.88e-06	0.232142	3e-08
rheumatoid arthritis	17_5369285	rs72634030	ENSG00000029725.16	RABEP1	87020	1.06e-06	0.341922	7e-08
rheumatoid arthritis	17_5369285	rs72634030	ENSG00000029725.16	RABEP1	87020	1.06e-06	0.341922	2e-09
rheumatoid arthritis	19_10351837	rs11085725	ENSG00000105397.13	TYK2	-28839	1.42e-05	0.221737	3e-10
rheumatoid arthritis	19_10359299	rs12720356	ENSG00000267673.6	FDX2	43284	5.12e-06	-0.393249	4e-09
rheumatoid arthritis	19_10359299	rs12720356	ENSG00000220201.7	ZGLP1	49419	3.8e-08	-0.393806	4e-09
rheumatoid arthritis	2_100056230	rs10209110	ENSG00000144218.18	AFF3	-86509	1.83e-07	0.245944	1e-08
rheumatoid arthritis	2_100056230	rs10209110	ENSG00000144218.18	AFF3	-86509	1.83e-07	0.245944	7e-08
rheumatoid arthritis	2_100143710	rs11123811	ENSG00000144218.18	AFF3	971	4.86e-07	0.242188	2e-18
rheumatoid arthritis	2_100143710	rs11123811	ENSG00000144218.18	AFF3	971	4.86e-07	0.242188	9e-16
rheumatoid arthritis	2_100190052	rs6712515	ENSG00000144218.18	AFF3	47313	9.9e-06	0.213843	2e-11
rheumatoid arthritis	2_100190052	rs6712515	ENSG00000144218.18	AFF3	47313	9.9e-06	0.213843	3e-11
rheumatoid arthritis	2_100190478	rs11676922	ENSG00000144218.18	AFF3	47739	1.55e-05	0.207766	1e-14
rheumatoid arthritis	2_100190478	rs11676922	ENSG00000144218.18	AFF3	47739	1.55e-05	0.207766	2e-08
rheumatoid arthritis	2_100208905	rs9653442	ENSG00000144218.18	AFF3	66166	2.51e-07	0.240906	2e-15
rheumatoid arthritis	2_100208905	rs9653442	ENSG00000144218.18	AFF3	66166	2.51e-07	0.240906	1e-14
rheumatoid arthritis	2_100208905	rs9653442	ENSG00000144218.18	AFF3	66166	2.51e-07	0.240906	2e-18
rheumatoid arthritis	2_100208905	rs9653442	ENSG00000144218.18	AFF3	66166	2.51e-07	0.240906	4e-12
rheumatoid arthritis	2_100219272	rs10865035	ENSG00000144218.18	AFF3	76533	3.74e-06	0.216836	2e-06
rheumatoid arthritis	2_190700031	rs744600	ENSG00000138386.16	NAB1	53285	3.62e-06	-0.219024	7e-11
rheumatoid arthritis	2_197748584	rs770667	ENSG00000115524.15	SF3B1	313493	0.000162097	-0.167845	2e-08
rheumatoid arthritis	2_201196097	rs3731714	ENSG00000240344.8	PPIL3	306794	4.87e-05	0.348889	7e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	9.39e-08	-0.588505	3e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000196290.14	NIF3L1	400347	8.66e-06	-0.370288	3e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000155749.12	FLACC1	-67724	1.04e-05	0.571624	3e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	9.39e-08	-0.588505	3e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000196290.14	NIF3L1	400347	8.66e-06	-0.370288	3e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000155749.12	FLACC1	-67724	1.04e-05	0.571624	3e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	9.39e-08	-0.588505	2e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000196290.14	NIF3L1	400347	8.66e-06	-0.370288	2e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000155749.12	FLACC1	-67724	1.04e-05	0.571624	2e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	9.39e-08	-0.588505	5e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000196290.14	NIF3L1	400347	8.66e-06	-0.370288	5e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000155749.12	FLACC1	-67724	1.04e-05	0.571624	5e-07
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162927.13	PUS10	-120446	1.05e-06	0.473557	4e-13
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162927.13	PUS10	-120446	1.05e-06	0.473557	5e-14
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162927.13	PUS10	-120446	1.05e-06	0.473557	2e-13
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162927.13	PUS10	-120446	1.05e-06	0.473557	4e-16
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162927.13	PUS10	-120446	1.05e-06	0.473557	3e-08
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162927.13	PUS10	-120446	1.05e-06	0.473557	2e-15
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162927.13	PUS10	-120446	1.05e-06	0.473557	4e-06
rheumatoid arthritis	2_60908994	rs13031237	ENSG00000162927.13	PUS10	-109167	2.12e-07	0.503805	8e-07
rheumatoid arthritis	2_60908994	rs13031237	ENSG00000162927.13	PUS10	-109167	2.12e-07	0.503805	1e-11
rheumatoid arthritis	2_60908994	rs13031237	ENSG00000162927.13	PUS10	-109167	2.12e-07	0.503805	1e-09
rheumatoid arthritis	2_60937196	rs13017599	ENSG00000162927.13	PUS10	-80965	4.67e-07	0.488759	2e-12
rheumatoid arthritis	20_46105671	rs6032662	ENSG00000101017.13	CD40	-12601	9.9e-08	0.5606	1e-09
rheumatoid arthritis	20_46118343	rs1883832	ENSG00000101017.13	CD40	71	6.51e-07	0.527325	2e-13
rheumatoid arthritis	20_46118343	rs1883832	ENSG00000101017.13	CD40	71	6.51e-07	0.527325	1e-16
rheumatoid arthritis	20_46118343	rs1883832	ENSG00000101017.13	CD40	71	6.51e-07	0.527325	9e-15
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	9.85e-07	0.517852	9e-11
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	9.85e-07	0.517852	3e-09
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	9.85e-07	0.517852	8e-09
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	9.85e-07	0.517852	2e-07
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	5.23e-07	0.515819	4e-14
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	5.23e-07	0.515819	3e-14
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	5.23e-07	0.515819	4e-18
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	5.23e-07	0.515819	1e-16
rheumatoid arthritis	22_21561877	rs5754100	ENSG00000161180.10	CCDC116	-70839	5.49e-14	-0.791478	9e-09
rheumatoid arthritis	22_21561877	rs5754100	ENSG00000161179.13	YDJC	-68187	2.27e-05	0.252778	9e-09
rheumatoid arthritis	22_21562072	rs5754104	ENSG00000161179.13	YDJC	-67992	5.62e-05	0.245603	1e-10
rheumatoid arthritis	22_21562072	rs5754104	ENSG00000161180.10	CCDC116	-70644	5.02e-14	-0.807781	1e-10
rheumatoid arthritis	22_21602364	rs2283790	ENSG00000161180.10	CCDC116	-30352	8.61e-16	-0.822166	2e-11
rheumatoid arthritis	22_21602364	rs2283790	ENSG00000161179.13	YDJC	-27700	3.78e-05	0.24179	2e-11
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	6.44e-11	-0.714509	1e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	6.44e-11	-0.714509	4e-06
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	6.44e-11	-0.714509	2e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	6.44e-11	-0.714509	6e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	6.44e-11	-0.714509	2e-09
rheumatoid arthritis	22_21625000	rs4821124	ENSG00000161180.10	CCDC116	-7716	5.49e-14	-0.791478	2e-11
rheumatoid arthritis	22_21625000	rs4821124	ENSG00000161179.13	YDJC	-5064	2.27e-05	0.252778	2e-11
rheumatoid arthritis	22_21630805	rs5754467	ENSG00000161180.10	CCDC116	-1911	8.02e-13	-0.764229	1e-13
rheumatoid arthritis	22_30285268	rs1043099	ENSG00000239282.7	CASTOR1	-4359	4.96e-06	-0.255069	7e-09
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000004534.14	RBM6	-279981	1.18e-07	0.360981	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000185614.4	INKA1	-143228	8.9e-09	-0.441031	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000233276.3	GPX1	301426	0.000228258	-0.201861	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000164068.15	RNF123	-29476	3.82e-06	-0.228953	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000173531.15	MST1	-29472	6.63e-07	0.40547	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000068745.14	IP6K2	919673	8.4e-06	-0.255738	6e-06
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000185614.4	INKA1	-128390	2.03e-08	-0.423358	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000004534.14	RBM6	-265143	1.01e-07	0.356123	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000164068.15	RNF123	-14638	3.7e-06	-0.22507	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000233276.3	GPX1	316264	0.00015462	-0.203225	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000173531.15	MST1	-14634	6.05e-08	0.430822	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000068745.14	IP6K2	934511	1.91e-05	-0.241492	5e-07
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000163684.11	RPP14	10961	1.34e-05	-0.500611	5e-08
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000168297.15	PXK	-15672	2.45e-06	-0.536963	5e-08
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000168291.12	PDHB	-116649	8.82e-06	-0.461447	5e-08
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000163684.11	RPP14	10961	1.34e-05	-0.500611	5e-08
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000168297.15	PXK	-15672	2.45e-06	-0.536963	5e-08
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000168291.12	PDHB	-116649	8.82e-06	-0.461447	5e-08
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000163684.11	RPP14	10961	1.34e-05	-0.500611	1e-08
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000168297.15	PXK	-15672	2.45e-06	-0.536963	1e-08
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000168291.12	PDHB	-116649	8.82e-06	-0.461447	1e-08
rheumatoid arthritis	4_10724896	rs13103285	ENSG00000109684.14	CLNK	40031	6.38e-05	-0.420435	4e-14
rheumatoid arthritis	4_10725733	rs13142500	ENSG00000109684.14	CLNK	40868	5.19e-05	-0.416543	2e-06
rheumatoid arthritis	4_10725733	rs13142500	ENSG00000109684.14	CLNK	40868	5.19e-05	-0.416543	2e-06
rheumatoid arthritis	4_10725733	rs13142500	ENSG00000109684.14	CLNK	40868	5.19e-05	-0.416543	3e-09
rheumatoid arthritis	4_10725733	rs13142500	ENSG00000109684.14	CLNK	40868	5.19e-05	-0.416543	7e-09
rheumatoid arthritis	4_25415622	rs3816587	ENSG00000053900.10	ANAPC4	38409	2.19e-06	-0.242368	9e-06
rheumatoid arthritis	4_25415622	rs3816587	ENSG00000038210.12	PI4K2B	181647	9.6e-08	-0.424481	9e-06
rheumatoid arthritis	4_78581818	rs10028001	ENSG00000138772.12	ANXA3	30299	2.79e-05	-0.233282	7e-06
rheumatoid arthritis	4_78592061	rs2867461	ENSG00000138772.12	ANXA3	40542	9.87e-05	-0.212416	1e-12
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145217.13	SLC26A1	-21508	2.89e-13	-0.483551	1e-08
rheumatoid arthritis	4_971932	rs13101828	ENSG00000127419.16	TMEM175	39545	2.56e-05	0.200841	1e-08
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145214.13	DGKQ	-14963	9.66e-07	0.253426	1e-08
rheumatoid arthritis	5_103261019	rs26232	ENSG00000175749.11	EIF3KP1	228643	4.05e-12	0.710591	4e-08
rheumatoid arthritis	5_103261019	rs26232	ENSG00000145730.20	PAM	507038	4.57e-07	0.335807	4e-08
rheumatoid arthritis	5_103261591	rs39984	ENSG00000145730.20	PAM	507610	4.57e-07	0.335807	3e-06
rheumatoid arthritis	5_103261591	rs39984	ENSG00000175749.11	EIF3KP1	229215	4.05e-12	0.710591	3e-06
rheumatoid arthritis	5_103261591	rs39984	ENSG00000145730.20	PAM	507610	4.57e-07	0.335807	9e-08
rheumatoid arthritis	5_103261591	rs39984	ENSG00000175749.11	EIF3KP1	229215	4.05e-12	0.710591	9e-08
rheumatoid arthritis	5_103268000	rs403214	ENSG00000145730.20	PAM	514019	3.24e-07	0.339343	4e-10
rheumatoid arthritis	5_103268000	rs403214	ENSG00000175749.11	EIF3KP1	235624	4.57e-12	0.708091	4e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	6.74e-14	0.772587	5e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000145730.20	PAM	519242	4.81e-07	0.341162	5e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	6.74e-14	0.772587	6e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000145730.20	PAM	519242	4.81e-07	0.341162	6e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	6.74e-14	0.772587	1e-09
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000145730.20	PAM	519242	4.81e-07	0.341162	1e-09
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	6.74e-14	0.772587	1e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000145730.20	PAM	519242	4.81e-07	0.341162	1e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	6.74e-14	0.772587	2e-11
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000145730.20	PAM	519242	4.81e-07	0.341162	2e-11
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	6.74e-14	0.772587	9e-08
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000145730.20	PAM	519242	4.81e-07	0.341162	9e-08
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	6.74e-14	0.772587	7e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000145730.20	PAM	519242	4.81e-07	0.341162	7e-10
rheumatoid arthritis	5_10704685	rs2918392	ENSG00000112977.15	DAP	-56587	1.01e-05	0.233162	5e-08
rheumatoid arthritis	5_132094425	rs657075	ENSG00000164398.12	ACSL6	82182	3.32e-08	-0.517881	8e-07
rheumatoid arthritis	5_132094425	rs657075	ENSG00000164398.12	ACSL6	82182	3.32e-08	-0.517881	3e-10
rheumatoid arthritis	5_132094425	rs657075	ENSG00000164398.12	ACSL6	82182	3.32e-08	-0.517881	8e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000164398.12	ACSL6	82182	3.32e-08	-0.517881	6e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000164398.12	ACSL6	82182	3.32e-08	-0.517881	1e-06
rheumatoid arthritis	5_132461855	rs6894249	ENSG00000197536.11	IRF1-AS1	51219	1.62e-05	-0.360762	1e-14
rheumatoid arthritis	5_150858959	rs147018773	ENSG00000197083.11	ZNF300P1	-87330	1.94e-35	1.45265	2e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000244731.7	C4A	-596472	1.17e-09	-0.842874	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204525.16	HLA-C	113447	7.58e-08	0.648826	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204536.13	CCHCR1	227314	1.21e-09	0.768491	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000231852.6	CYP21A2	-652713	2.42e-06	0.774267	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204516.9	MICB	-109329	5.87e-12	1.12328	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000137312.14	FLOT1	642819	5.68e-06	0.465336	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000224389.8	C4B	-629210	6.6e-07	0.629931	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204338.8	CYP21A1P	-620137	9.73e-09	-0.919638	9e-09
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204428.12	LY6G5C	-29211	4.12e-06	0.411079	3e-10
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204525.16	HLA-C	382724	4.84e-07	-0.42586	3e-10
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204463.12	BAG6	2124	2.17e-13	0.443262	3e-10
rheumatoid arthritis	6_32315077	rs6910071	ENSG00000237541.3	HLA-DQA2	-426265	3.95e-05	0.489092	1e-299
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000196126.11	HLA-DRB1	-181652	3.49e-06	-0.419308	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000237541.3	HLA-DQA2	-333146	2.32e-09	0.672485	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000229391.7	HLA-DRB6	-151826	2.08e-07	0.583942	2e-124
rheumatoid arthritis	6_32446496	rs3129890	ENSG00000224389.8	C4B	431734	5.31e-05	0.380723	1e-10
rheumatoid arthritis	6_32446496	rs3129890	ENSG00000244731.7	C4A	464472	5.49e-05	-0.423049	1e-10
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000204301.6	NOTCH4	223236	2.9e-05	-0.316268	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000213722.8	DDAH2	716723	7.45e-06	-0.25215	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000244731.7	C4A	465279	7.01e-08	-0.616681	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000204387.12	SNHG32	612695	0.000128203	-0.288677	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000204338.8	CYP21A1P	441614	9.73e-05	-0.523384	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000204308.7	RNF5	268949	2.4e-05	-0.407353	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000204516.9	MICB	952422	8.31e-06	0.617708	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000224389.8	C4B	432541	6.09e-07	0.515734	2e-09
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	3.48e-20	0.718721	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	5.11e-07	0.432162	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	3.48e-20	0.718721	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	5.11e-07	0.432162	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	3.48e-20	0.718721	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	5.11e-07	0.432162	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	3.48e-20	0.718721	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	5.11e-07	0.432162	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	3.48e-20	0.718721	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	5.11e-07	0.432162	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	3.48e-20	0.718721	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	5.11e-07	0.432162	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	3.48e-20	0.718721	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	5.11e-07	0.432162	1e-100
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000229391.7	HLA-DRB6	-83601	3.48e-20	0.718721	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000237541.3	HLA-DQA2	-264921	5.11e-07	0.432162	5e-58
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000229391.7	HLA-DRB6	-73863	7.13e-18	0.721097	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000237541.3	HLA-DQA2	-255183	1.91e-05	0.392697	6e-227
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000198502.5	HLA-DRB5	3080	1.05e-14	-0.640677	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000244731.7	C4A	551343	2.45e-06	-0.398563	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000231852.6	CYP21A2	495102	5.74e-07	0.488751	9e-52
rheumatoid arthritis	6_32593593	rs35139284	ENSG00000229391.7	HLA-DRB6	33571	1.55e-07	0.506653	4e-287
rheumatoid arthritis	6_32606394	rs615672	ENSG00000198502.5	HLA-DRB5	76107	5.09e-08	-0.501523	8e-27
rheumatoid arthritis	6_32606394	rs615672	ENSG00000231852.6	CYP21A2	568129	4.09e-06	0.482084	8e-27
rheumatoid arthritis	6_32606394	rs615672	ENSG00000244731.7	C4A	624370	0.000110543	-0.351858	8e-27
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	1.13e-05	-0.374679	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.63e-05	0.480979	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000179344.16	HLA-DQB1	-58780	3.78e-05	-0.414048	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	2.27e-16	0.831669	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	1.04e-05	0.471719	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	1.13e-05	-0.374679	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.63e-05	0.480979	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000179344.16	HLA-DQB1	-58780	3.78e-05	-0.414048	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	2.27e-16	0.831669	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	1.04e-05	0.471719	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	1.13e-05	-0.374679	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.63e-05	0.480979	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000179344.16	HLA-DQB1	-58780	3.78e-05	-0.414048	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	2.27e-16	0.831669	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	1.04e-05	0.471719	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	1.13e-05	-0.374679	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.63e-05	0.480979	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000179344.16	HLA-DQB1	-58780	3.78e-05	-0.414048	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	2.27e-16	0.831669	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	1.04e-05	0.471719	1e-300
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000179344.16	HLA-DQB1	-53510	7.31e-06	-0.491536	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	4.59e-10	0.710709	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	4.05e-16	0.904967	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000196126.11	HLA-DRB1	25025	4.79e-06	-0.426689	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000179344.16	HLA-DQB1	-53510	7.31e-06	-0.491536	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	4.59e-10	0.710709	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	4.05e-16	0.904967	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000196126.11	HLA-DRB1	25025	4.79e-06	-0.426689	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000179344.16	HLA-DQB1	-52803	7.31e-06	-0.491536	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000196126.11	HLA-DRB1	25732	4.79e-06	-0.426689	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000229391.7	HLA-DRB6	55558	4.59e-10	0.710709	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000237541.3	HLA-DQA2	-125762	4.05e-16	0.904967	2e-10
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000198502.5	HLA-DRB5	85678	6.91e-15	-0.750936	5e-07
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000196126.11	HLA-DRB1	39397	4.79e-06	-0.426689	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000229391.7	HLA-DRB6	69223	4.59e-10	0.710709	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000179344.16	HLA-DQB1	-39138	7.31e-06	-0.491536	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000237541.3	HLA-DQA2	-112097	4.05e-16	0.904967	3e-11
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000229391.7	HLA-DRB6	136052	1.85e-05	0.393821	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000204338.8	CYP21A1P	690385	2.66e-05	0.432198	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	2.87e-06	0.434009	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000229391.7	HLA-DRB6	136052	1.85e-05	0.393821	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000204338.8	CYP21A1P	690385	2.66e-05	0.432198	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	2.87e-06	0.434009	5e-75
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000229391.7	HLA-DRB6	136200	1.85e-05	0.393821	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000204338.8	CYP21A1P	690533	2.66e-05	0.432198	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000237541.3	HLA-DQA2	-45120	2.87e-06	0.434009	4e-186
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000241106.6	HLA-DOB	-117718	1.49e-05	0.738518	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000237541.3	HLA-DQA2	-42012	8.53e-11	1.00216	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000229391.7	HLA-DRB6	139308	1.01e-06	0.764643	2e-06
rheumatoid arthritis	6_32703326	rs13192471	ENSG00000179344.16	HLA-DQB1	34943	1.68e-05	0.525499	2e-58
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000229391.7	HLA-DRB6	145775	1.01e-06	0.764643	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000241106.6	HLA-DOB	-111251	1.49e-05	0.738518	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000237541.3	HLA-DQA2	-35545	8.53e-11	1.00216	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000237541.3	HLA-DQA2	-33596	8.53e-11	1.00216	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000229391.7	HLA-DRB6	147724	1.01e-06	0.764643	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000241106.6	HLA-DOB	-109302	1.49e-05	0.738518	2e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000241106.6	HLA-DOB	-109191	1.49e-05	0.738518	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000229391.7	HLA-DRB6	147835	1.01e-06	0.764643	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000237541.3	HLA-DQA2	-33485	8.53e-11	1.00216	5e-06
rheumatoid arthritis	6_32713151	rs7765379	ENSG00000196126.11	HLA-DRB1	123303	6.63e-05	-0.443546	5e-23
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000237541.3	HLA-DQA2	-27636	8.53e-11	1.00216	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000229391.7	HLA-DRB6	153684	1.01e-06	0.764643	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000241106.6	HLA-DOB	-103342	1.49e-05	0.738518	2e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000241106.6	HLA-DOB	-103295	1.49e-05	0.738518	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000237541.3	HLA-DQA2	-27589	8.53e-11	1.00216	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000229391.7	HLA-DRB6	153731	1.01e-06	0.764643	1e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000237541.3	HLA-DQA2	-27100	8.53e-11	1.00216	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000229391.7	HLA-DRB6	154220	1.01e-06	0.764643	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000241106.6	HLA-DOB	-102806	1.49e-05	0.738518	2e-06
rheumatoid arthritis	6_44261078	rs28362859	ENSG00000146221.9	TCTE1	-36610	2.56e-06	0.761698	4e-12
rheumatoid arthritis	6_44261078	rs28362859	ENSG00000146221.9	TCTE1	-36610	2.56e-06	0.761698	1e-12
rheumatoid arthritis	6_44265183	rs2233434	ENSG00000146221.9	TCTE1	-32505	2.2e-07	0.8314	1e-15
rheumatoid arthritis	6_44265183	rs2233434	ENSG00000146221.9	TCTE1	-32505	2.2e-07	0.8314	6e-19
rheumatoid arthritis	6_44266184	rs2233424	ENSG00000146221.9	TCTE1	-31504	2.2e-07	0.8314	2e-13
rheumatoid arthritis	6_44266184	rs2233424	ENSG00000146221.9	TCTE1	-31504	2.2e-07	0.8314	3e-08
rheumatoid arthritis	6_44266184	rs2233424	ENSG00000146221.9	TCTE1	-31504	2.2e-07	0.8314	1e-19
rheumatoid arthritis	6_44266184	rs2233424	ENSG00000146221.9	TCTE1	-31504	2.2e-07	0.8314	9e-13
rheumatoid arthritis	6_44266184	rs2233424	ENSG00000146221.9	TCTE1	-31504	2.2e-07	0.8314	2e-19
rheumatoid arthritis	6_44266184	rs2233424	ENSG00000146221.9	TCTE1	-31504	2.2e-07	0.8314	7e-26
rheumatoid arthritis	6_44266184	rs2233424	ENSG00000146221.9	TCTE1	-31504	2.2e-07	0.8314	3e-08
rheumatoid arthritis	6_44277504	rs1044690	ENSG00000146221.9	TCTE1	-20184	1.73e-14	0.488671	9e-10
rheumatoid arthritis	6_44277504	rs1044690	ENSG00000124608.4	AARS2	-35822	2.83e-05	-0.226342	9e-10
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	1.57e-19	-0.659809	2e-06
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	1.57e-19	-0.659809	4e-09
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	1.57e-19	-0.659809	6e-06
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	1.57e-19	-0.659809	3e-09
rheumatoid arthritis	8_11480861	rs2618444	ENSG00000227888.4	FAM66A	-881158	3.97e-06	0.520731	7e-12
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	7.75e-06	0.505873	4e-13
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	7.75e-06	0.505873	8e-08
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	7.75e-06	0.505873	2e-06
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	7.75e-06	0.505873	3e-13
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	7.75e-06	0.505873	2e-07
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	7.75e-06	0.505873	5e-22
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	7.75e-06	0.505873	2e-07
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000227888.4	FAM66A	-875555	6.94e-06	0.507315	9e-12
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000227888.4	FAM66A	-875555	6.94e-06	0.507315	6e-09
rheumatoid arthritis	8_11488036	rs4840565	ENSG00000227888.4	FAM66A	-873983	7.5e-07	0.51543	4e-06
rheumatoid arthritis	8_11491452	rs9693589	ENSG00000227888.4	FAM66A	-870567	6.94e-06	0.507315	2e-18
rheumatoid arthritis	8_11494403	rs922483	ENSG00000227888.4	FAM66A	-867616	2.32e-05	0.456937	2e-07
rheumatoid arthritis	8_11502129	rs1600249	ENSG00000254507.2	DEFB131E	-501953	1.14e-06	0.485268	5e-06
rheumatoid arthritis	8_11502129	rs1600249	ENSG00000227888.4	FAM66A	-859890	3.45e-05	0.472357	5e-06
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	4.69e-11	0.479633	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	4.67e-11	-0.624147	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	4.69e-11	0.479633	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	4.67e-11	-0.624147	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	4.69e-11	0.479633	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	4.67e-11	-0.624147	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	4.69e-11	0.479633	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	4.67e-11	-0.624147	5e-11
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000226752.9	CUTALP	64195	2.16e-12	-0.666404	3e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000056558.10	TRAF1	-40150	3.04e-11	0.488066	3e-09
rheumatoid arthritis	9_120890620	rs881375	ENSG00000056558.10	TRAF1	-38553	3.2e-24	0.689822	4e-08
rheumatoid arthritis	9_120890620	rs881375	ENSG00000226752.9	CUTALP	65792	9.33e-13	-0.677976	4e-08
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000056558.10	TRAF1	-28833	1.87e-11	0.49327	4e-12
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000226752.9	CUTALP	75512	1.24e-12	-0.673552	4e-12
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000226752.9	CUTALP	81093	4.79e-13	-0.687347	1e-10
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000056558.10	TRAF1	-23252	9.18e-25	0.697781	1e-10
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000056558.10	TRAF1	-7882	6.78e-12	0.49138	4e-07
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	1.55e-11	-0.629734	4e-07
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000056558.10	TRAF1	-7882	6.78e-12	0.49138	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	1.55e-11	-0.629734	2e-08
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000056558.10	TRAF1	-1212	6.78e-12	0.49138	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	1.55e-11	-0.629734	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000056558.10	TRAF1	-1212	6.78e-12	0.49138	4e-14
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	1.55e-11	-0.629734	4e-14
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000226752.9	CUTALP	108176	1.66e-12	-0.68162	2e-06
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000056558.10	TRAF1	3831	1.4e-25	0.715091	2e-06
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000226752.9	CUTALP	119276	1.66e-12	-0.68162	6e-09
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000056558.10	TRAF1	14931	1.4e-25	0.715091	6e-09
rheumatoid arthritis	9_136378050	rs3812565	ENSG00000148384.12	INPP5E	-61773	2.02e-08	-0.309686	2e-09
rheumatoid arthritis	9_136378050	rs3812565	ENSG00000160360.12	GPSM1	50574	2.43e-11	-0.399963	2e-09
rheumatoid arthritis	9_136395373	rs4266763	ENSG00000160360.12	GPSM1	67897	3.62e-09	-0.363483	1e-13
rheumatoid arthritis	9_136395373	rs4266763	ENSG00000148384.12	INPP5E	-44450	3.48e-08	-0.309232	1e-13
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	1.25e-13	-0.538857	1e-12
rheumatoid arthritis	X_153982797	rs13397	ENSG00000180879.13	SSR4	189281	3.75e-05	-0.240383	1e-12
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	1.25e-13	-0.538857	3e-12
rheumatoid arthritis	X_153982797	rs13397	ENSG00000180879.13	SSR4	189281	3.75e-05	-0.240383	3e-12
rheumatoid arthritis	X_154018741	rs1059702	ENSG00000180879.13	SSR4	225225	3.75e-05	0.240383	5e-10
rheumatoid arthritis	X_154018741	rs1059702	ENSG00000177854.7	TMEM187	46414	1.25e-13	0.538857	5e-10
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000180879.13	SSR4	242500	0.000126311	0.220376	4e-22
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	2.56e-11	0.483502	4e-22
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000180879.13	SSR4	242500	0.000126311	0.220376	5e-16
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	2.56e-11	0.483502	5e-16
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000180879.13	SSR4	242500	0.000126311	0.220376	3e-12
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	2.56e-11	0.483502	3e-12