DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
rheumatoid arthritis	1_17328912	rs1748041	ENSG00000159339.13	PADI4	20717	2.36e-12	0.696308	2e-09
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.15e-43	0.994233	5e-21
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.15e-43	0.994233	6e-09
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.15e-43	0.994233	4e-26
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.15e-43	0.994233	6e-19
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.15e-43	0.994233	8e-13
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.15e-43	0.994233	9e-13
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.15e-43	0.994233	1e-18
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.15e-43	0.994233	6e-09
rheumatoid arthritis	1_17347613	rs2240339	ENSG00000159339.13	PADI4	39418	7e-46	1.01398	3e-10
rheumatoid arthritis	1_17347613	rs2240339	ENSG00000159339.13	PADI4	39418	7e-46	1.01398	1e-10
rheumatoid arthritis	1_17347907	rs2240336	ENSG00000159339.13	PADI4	39712	8.36e-46	0.994195	4e-08
rheumatoid arthritis	1_17347907	rs2240336	ENSG00000159339.13	PADI4	39712	8.36e-46	0.994195	6e-09
rheumatoid arthritis	1_17348042	rs2240335	ENSG00000159339.13	PADI4	39847	3e-46	1.01611	2e-08
rheumatoid arthritis	1_17348042	rs2240335	ENSG00000159339.13	PADI4	39847	3e-46	1.01611	2e-08
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	1.15e-10	0.430953	2e-11
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	1.15e-10	0.430953	3e-12
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	1.15e-10	0.430953	5e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	1.15e-10	0.430953	6e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	1.15e-10	0.430953	6e-12
rheumatoid arthritis	10_80462422	rs7100689	ENSG00000122359.17	ANXA11	256850	5.1e-09	0.367094	7e-08
rheumatoid arthritis	11_609888	rs12421158	ENSG00000069696.6	DRD4	-27405	7.7e-07	-0.310373	4e-06
rheumatoid arthritis	11_609888	rs12421158	ENSG00000177042.14	TMEM80	-85645	4.15e-05	0.367521	4e-06
rheumatoid arthritis	11_609888	rs12421158	ENSG00000174775.16	HRAS	72601	2.24e-05	-0.203877	4e-06
rheumatoid arthritis	11_61822009	rs28456	ENSG00000149485.18	FADS1	-7309	2.91e-12	-0.322288	4e-06
rheumatoid arthritis	11_61828092	rs968567	ENSG00000149485.18	FADS1	-1226	1.05e-05	-0.292241	2e-08
rheumatoid arthritis	11_61828092	rs968567	ENSG00000149485.18	FADS1	-1226	1.05e-05	-0.292241	7e-07
rheumatoid arthritis	11_633689	rs7929541	ENSG00000069696.6	DRD4	-3604	3.1e-07	-0.299414	2e-10
rheumatoid arthritis	11_633689	rs7929541	ENSG00000177042.14	TMEM80	-61844	1.71e-12	0.563115	2e-10
rheumatoid arthritis	11_64275525	rs660442	ENSG00000168071.21	CCDC88B	-64698	1.51e-06	-0.370345	1e-09
rheumatoid arthritis	12_112433568	rs11066301	ENSG00000089022.13	MAPKAPK5	590465	3.25e-05	0.233601	4e-08
rheumatoid arthritis	12_48021974	rs4760609	ENSG00000177981.10	ASB8	-159239	1.38e-11	0.403981	3e-12
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.45e-08	-0.257828	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.62e-43	0.893187	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.45e-08	-0.257828	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.62e-43	0.893187	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.45e-08	-0.257828	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.62e-43	0.893187	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.45e-08	-0.257828	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.62e-43	0.893187	9e-08
rheumatoid arthritis	12_57574932	rs1678542	ENSG00000123427.16	EEF1AKMT3	-196674	1.41e-05	0.292872	1e-07
rheumatoid arthritis	12_57574932	rs1678542	ENSG00000123427.16	EEF1AKMT3	-196674	1.41e-05	0.292872	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	2.27e-11	-0.409219	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	9.26e-05	0.20763	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	2.27e-11	-0.409219	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	9.26e-05	0.20763	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	2.27e-11	-0.409219	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	9.26e-05	0.20763	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	2.27e-11	-0.409219	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	9.26e-05	0.20763	1e-07
rheumatoid arthritis	14_104919812	rs2841269	ENSG00000140104.13	CLBA1	-65963	1.11e-09	0.317477	2e-16
rheumatoid arthritis	14_104924668	rs2841277	ENSG00000140104.13	CLBA1	-61107	7.47e-11	0.345322	2e-14
rheumatoid arthritis	15_90350436	rs6496667	ENSG00000140575.12	IQGAP1	-37782	2.11e-22	0.505584	1e-06
rheumatoid arthritis	15_90483245	rs8040585	ENSG00000140575.12	IQGAP1	95027	2.68e-14	0.329341	2e-08
rheumatoid arthritis	16_1491460	rs2745106	ENSG00000100726.14	TELO2	-1884	2.42e-07	-0.471501	2e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000103510.19	KAT8	-500459	4.31e-05	0.264319	3e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000178226.10	PRSS36	-534799	2.18e-06	0.487164	3e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000196118.11	CFAP119	-147415	1.63e-06	-0.304951	3e-08
rheumatoid arthritis	19_10359299	rs12720356	ENSG00000220201.7	ZGLP1	49419	4.47e-05	-0.271887	4e-09
rheumatoid arthritis	2_100056230	rs10209110	ENSG00000144218.18	AFF3	-86509	9.7e-08	0.262674	1e-08
rheumatoid arthritis	2_100056230	rs10209110	ENSG00000144218.18	AFF3	-86509	9.7e-08	0.262674	7e-08
rheumatoid arthritis	2_100142823	rs11123810	ENSG00000144218.18	AFF3	84	8.4e-09	0.285738	7e-12
rheumatoid arthritis	2_100143710	rs11123811	ENSG00000144218.18	AFF3	971	2.39e-06	0.238747	9e-16
rheumatoid arthritis	2_100143710	rs11123811	ENSG00000144218.18	AFF3	971	2.39e-06	0.238747	2e-18
rheumatoid arthritis	2_100147542	rs13415465	ENSG00000144218.18	AFF3	4803	8.4e-09	0.285738	7e-11
rheumatoid arthritis	2_100208905	rs9653442	ENSG00000144218.18	AFF3	66166	5.3e-05	0.202315	2e-15
rheumatoid arthritis	2_100208905	rs9653442	ENSG00000144218.18	AFF3	66166	5.3e-05	0.202315	1e-14
rheumatoid arthritis	2_100208905	rs9653442	ENSG00000144218.18	AFF3	66166	5.3e-05	0.202315	4e-12
rheumatoid arthritis	2_100208905	rs9653442	ENSG00000144218.18	AFF3	66166	5.3e-05	0.202315	2e-18
rheumatoid arthritis	2_190673836	rs10931468	ENSG00000138386.16	NAB1	27090	6.62e-05	0.263958	1e-08
rheumatoid arthritis	2_190700031	rs744600	ENSG00000138386.16	NAB1	53285	3.26e-07	-0.24991	7e-11
rheumatoid arthritis	20_46105671	rs6032662	ENSG00000101017.13	CD40	-12601	1.66e-06	0.303008	1e-09
rheumatoid arthritis	20_46118343	rs1883832	ENSG00000101017.13	CD40	71	5.55e-07	0.315662	2e-13
rheumatoid arthritis	20_46118343	rs1883832	ENSG00000101017.13	CD40	71	5.55e-07	0.315662	9e-15
rheumatoid arthritis	20_46118343	rs1883832	ENSG00000101017.13	CD40	71	5.55e-07	0.315662	1e-16
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	8.42e-07	0.309017	8e-09
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	8.42e-07	0.309017	9e-11
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	8.42e-07	0.309017	2e-07
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	8.42e-07	0.309017	3e-09
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	2.37e-06	0.29135	1e-16
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	2.37e-06	0.29135	3e-14
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	2.37e-06	0.29135	4e-18
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	2.37e-06	0.29135	4e-14
rheumatoid arthritis	22_21561877	rs5754100	ENSG00000161180.10	CCDC116	-70839	2.21e-08	-0.615139	9e-09
rheumatoid arthritis	22_21562072	rs5754104	ENSG00000161180.10	CCDC116	-70644	5.26e-08	-0.61268	1e-10
rheumatoid arthritis	22_21602364	rs2283790	ENSG00000161180.10	CCDC116	-30352	1.13e-08	-0.612779	2e-11
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.4e-07	-0.597535	4e-06
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.4e-07	-0.597535	2e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.4e-07	-0.597535	6e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.4e-07	-0.597535	1e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.4e-07	-0.597535	2e-09
rheumatoid arthritis	22_21625000	rs4821124	ENSG00000161180.10	CCDC116	-7716	4.37e-08	-0.596105	2e-11
rheumatoid arthritis	22_21630805	rs5754467	ENSG00000161180.10	CCDC116	-1911	1.23e-07	-0.570429	1e-13
rheumatoid arthritis	22_30285268	rs1043099	ENSG00000239282.7	CASTOR1	-4359	2.36e-05	-0.196541	7e-09
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000164061.4	BSN	105537	4.48e-05	-0.0826579	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000173540.12	GMPPB	-63925	0.000107383	-0.279984	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000233276.3	GPX1	301426	5.62e-05	-0.234534	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000004534.14	RBM6	-279981	1.01e-05	0.281061	6e-06
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000004534.14	RBM6	-265143	3.92e-06	0.29165	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000164061.4	BSN	120375	5.43e-05	-0.0814135	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000233276.3	GPX1	316264	1.65e-05	-0.248766	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000173540.12	GMPPB	-49087	0.000118853	-0.276978	5e-07
rheumatoid arthritis	4_25415622	rs3816587	ENSG00000053900.10	ANAPC4	38409	2.6e-09	-0.287035	9e-06
rheumatoid arthritis	4_78581818	rs10028001	ENSG00000138772.12	ANXA3	30299	3.8e-05	-0.215279	7e-06
rheumatoid arthritis	4_78592061	rs2867461	ENSG00000138772.12	ANXA3	40542	3.9e-05	-0.206026	1e-12
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145217.13	SLC26A1	-21508	2.97e-12	-0.50403	1e-08
rheumatoid arthritis	5_132094425	rs657075	ENSG00000164398.12	ACSL6	82182	3.29e-07	-0.357927	8e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000164398.12	ACSL6	82182	3.29e-07	-0.357927	6e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000164398.12	ACSL6	82182	3.29e-07	-0.357927	1e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000164398.12	ACSL6	82182	3.29e-07	-0.357927	3e-10
rheumatoid arthritis	5_132094425	rs657075	ENSG00000164398.12	ACSL6	82182	3.29e-07	-0.357927	8e-07
rheumatoid arthritis	5_132461855	rs6894249	ENSG00000158987.20	RAPGEF6	826619	0.000153649	0.181009	1e-14
rheumatoid arthritis	5_132461855	rs6894249	ENSG00000197536.11	IRF1-AS1	51219	3.12e-05	-0.251328	1e-14
rheumatoid arthritis	5_132461855	rs6894249	ENSG00000164398.12	ACSL6	449612	3.71e-06	-0.209289	1e-14
rheumatoid arthritis	5_150858959	rs147018773	ENSG00000197083.11	ZNF300P1	-87330	4.54e-19	1.07142	2e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204516.9	MICB	-109329	7.81e-06	0.574446	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000231852.6	CYP21A2	-652713	4.44e-05	0.519119	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204525.16	HLA-C	113447	3.68e-10	0.707945	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000224389.8	C4B	-629210	2.92e-05	0.35942	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000244731.7	C4A	-596472	2.12e-06	-0.508429	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204338.8	CYP21A1P	-620137	2.13e-06	-0.6968	9e-09
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204338.8	CYP21A1P	-350860	4.94e-08	0.56741	3e-10
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204463.12	BAG6	2124	2.4e-15	0.545321	3e-10
rheumatoid arthritis	6_32315077	rs6910071	ENSG00000204463.12	BAG6	662372	9.08e-05	0.305887	1e-299
rheumatoid arthritis	6_32315077	rs6910071	ENSG00000196126.11	HLA-DRB1	-274771	2.57e-05	-0.336687	1e-299
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000196126.11	HLA-DRB1	-181652	9.52e-08	-0.415527	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000237541.3	HLA-DQA2	-333146	9.13e-09	0.684834	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000229391.7	HLA-DRB6	-151826	9.27e-07	0.50817	2e-124
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000196126.11	HLA-DRB1	-168320	1.56e-05	-0.276411	3e-10
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000204308.7	RNF5	243174	7.69e-05	0.221024	3e-10
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000237541.3	HLA-DQA2	-294039	4.43e-05	-0.515828	2e-09
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	4.19e-07	-0.316182	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.44e-05	-0.331167	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	4.98e-17	0.649071	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	1.43e-05	-0.288459	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	1.62e-05	-0.390589	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	2.56e-06	0.455166	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	4.19e-07	-0.316182	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.44e-05	-0.331167	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	4.98e-17	0.649071	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	1.43e-05	-0.288459	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	1.62e-05	-0.390589	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	2.56e-06	0.455166	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	4.19e-07	-0.316182	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.44e-05	-0.331167	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	4.98e-17	0.649071	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	1.43e-05	-0.288459	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	1.62e-05	-0.390589	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	2.56e-06	0.455166	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	4.19e-07	-0.316182	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.44e-05	-0.331167	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	4.98e-17	0.649071	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	1.43e-05	-0.288459	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	1.62e-05	-0.390589	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	2.56e-06	0.455166	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	4.19e-07	-0.316182	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.44e-05	-0.331167	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	4.98e-17	0.649071	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	1.43e-05	-0.288459	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	1.62e-05	-0.390589	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	2.56e-06	0.455166	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	4.19e-07	-0.316182	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.44e-05	-0.331167	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	4.98e-17	0.649071	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	1.43e-05	-0.288459	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	1.62e-05	-0.390589	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	2.56e-06	0.455166	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	4.19e-07	-0.316182	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.44e-05	-0.331167	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	4.98e-17	0.649071	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	1.43e-05	-0.288459	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	1.62e-05	-0.390589	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	2.56e-06	0.455166	4e-134
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000196126.11	HLA-DRB1	-113427	2.32e-07	-0.32524	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000237541.3	HLA-DQA2	-264921	4.09e-06	0.450006	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000179344.16	HLA-DQB1	-191962	2.05e-05	-0.342834	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000229391.7	HLA-DRB6	-83601	9.23e-17	0.649773	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000196735.11	HLA-DQA1	-151758	1.12e-05	-0.294112	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000223534.1	HLA-DQB1-AS1	-183934	8.07e-06	-0.406806	5e-58
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000229391.7	HLA-DRB6	-73863	2.07e-14	0.641373	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000196735.11	HLA-DQA1	-142020	6.5e-05	-0.284156	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000196126.11	HLA-DRB1	-103689	1.25e-05	-0.293746	6e-227
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000198502.5	HLA-DRB5	3080	1.59e-15	-0.651662	9e-52
rheumatoid arthritis	6_32606394	rs615672	ENSG00000198502.5	HLA-DRB5	76107	6.31e-08	-0.466307	8e-27
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.77e-08	0.700999	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.89e-17	0.955258	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	6.82e-07	-0.388067	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.77e-08	0.700999	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.89e-17	0.955258	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	6.82e-07	-0.388067	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.77e-08	0.700999	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.89e-17	0.955258	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	6.82e-07	-0.388067	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.77e-08	0.700999	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.89e-17	0.955258	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	6.82e-07	-0.388067	1e-108
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	2.11e-07	0.578393	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	3.98e-16	0.999257	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000232629.8	HLA-DQB2	-148661	1.01e-06	0.666723	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000234515.1	PPP1R2P1	-264975	5.93e-05	-0.456731	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000196126.11	HLA-DRB1	25025	1.19e-08	-0.47697	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	2.11e-07	0.578393	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	3.98e-16	0.999257	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000232629.8	HLA-DQB2	-148661	1.01e-06	0.666723	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000234515.1	PPP1R2P1	-264975	5.93e-05	-0.456731	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000196126.11	HLA-DRB1	25025	1.19e-08	-0.47697	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000232629.8	HLA-DQB2	-147954	1.01e-06	0.666723	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000234515.1	PPP1R2P1	-264268	5.93e-05	-0.456731	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000196126.11	HLA-DRB1	25732	1.19e-08	-0.47697	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000229391.7	HLA-DRB6	55558	2.11e-07	0.578393	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000237541.3	HLA-DQA2	-125762	3.98e-16	0.999257	2e-10
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000198502.5	HLA-DRB5	85678	1.97e-17	-0.782546	5e-07
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000237541.3	HLA-DQA2	-112097	3.98e-16	0.999257	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000229391.7	HLA-DRB6	69223	2.11e-07	0.578393	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000196126.11	HLA-DRB1	39397	1.19e-08	-0.47697	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000234515.1	PPP1R2P1	-250603	5.93e-05	-0.456731	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000232629.8	HLA-DQB2	-134289	1.01e-06	0.666723	3e-11
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	7.97e-08	0.5485	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000196126.11	HLA-DRB1	106226	4.49e-06	-0.307791	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000223534.1	HLA-DQB1-AS1	35719	1.99e-05	-0.412346	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000232629.8	HLA-DQB2	-67460	1.6e-08	0.600349	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	7.97e-08	0.5485	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000196126.11	HLA-DRB1	106226	4.49e-06	-0.307791	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000223534.1	HLA-DQB1-AS1	35719	1.99e-05	-0.412346	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000232629.8	HLA-DQB2	-67460	1.6e-08	0.600349	5e-75
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000232629.8	HLA-DQB2	-67312	1.6e-08	0.600349	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000196126.11	HLA-DRB1	106374	4.49e-06	-0.307791	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000237541.3	HLA-DQA2	-45120	7.97e-08	0.5485	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000223534.1	HLA-DQB1-AS1	35867	1.99e-05	-0.412346	4e-186
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000237541.3	HLA-DQA2	-42012	1.83e-07	0.954002	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000196126.11	HLA-DRB1	109482	7.36e-05	-0.478704	2e-06
rheumatoid arthritis	6_32703326	rs13192471	ENSG00000232629.8	HLA-DQB2	-60208	6.87e-08	-0.80675	2e-58
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000237541.3	HLA-DQA2	-35545	1.83e-07	0.954002	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000196126.11	HLA-DRB1	115949	7.36e-05	-0.478704	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000196126.11	HLA-DRB1	117898	7.36e-05	-0.478704	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000237541.3	HLA-DQA2	-33596	1.83e-07	0.954002	2e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000237541.3	HLA-DQA2	-33485	1.83e-07	0.954002	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000196126.11	HLA-DRB1	118009	7.36e-05	-0.478704	5e-06
rheumatoid arthritis	6_32713151	rs7765379	ENSG00000237541.3	HLA-DQA2	-28191	9.09e-06	0.709909	5e-23
rheumatoid arthritis	6_32713151	rs7765379	ENSG00000232629.8	HLA-DQB2	-50383	1.57e-08	0.927687	5e-23
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000237541.3	HLA-DQA2	-27636	1.83e-07	0.954002	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000196126.11	HLA-DRB1	123858	7.36e-05	-0.478704	2e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000196126.11	HLA-DRB1	123905	7.36e-05	-0.478704	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000237541.3	HLA-DQA2	-27589	1.83e-07	0.954002	1e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000237541.3	HLA-DQA2	-27100	1.83e-07	0.954002	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000196126.11	HLA-DRB1	124394	7.36e-05	-0.478704	2e-06
rheumatoid arthritis	6_44277504	rs1044690	ENSG00000146221.9	TCTE1	-20184	3.27e-06	0.318415	9e-10
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	6.2e-08	-0.448732	4e-09
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	6.2e-08	-0.448732	3e-09
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	6.2e-08	-0.448732	6e-06
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	6.2e-08	-0.448732	2e-06
rheumatoid arthritis	8_11480861	rs2618444	ENSG00000227888.4	FAM66A	-881158	4.48e-05	0.506357	7e-12
rheumatoid arthritis	8_11480861	rs2618444	ENSG00000254507.2	DEFB131E	-523221	6.14e-05	0.417451	7e-12
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000227888.4	FAM66A	-875555	3.82e-05	0.508027	6e-09
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000227888.4	FAM66A	-875555	3.82e-05	0.508027	9e-12
rheumatoid arthritis	8_11488036	rs4840565	ENSG00000249889.1	ALG1L11P	-690661	3.03e-05	0.470752	4e-06
rheumatoid arthritis	8_11488036	rs4840565	ENSG00000227888.4	FAM66A	-873983	4.09e-05	0.489461	4e-06
rheumatoid arthritis	8_11491452	rs9693589	ENSG00000227888.4	FAM66A	-870567	4.14e-05	0.510687	2e-18
rheumatoid arthritis	8_11502129	rs1600249	ENSG00000249889.1	ALG1L11P	-676568	3.08e-05	0.479247	5e-06
rheumatoid arthritis	8_11502129	rs1600249	ENSG00000227888.4	FAM66A	-859890	3.7e-05	0.501492	5e-06
rheumatoid arthritis	8_11502129	rs1600249	ENSG00000255020.1	TDH-AS1	154627	2.1e-05	0.377787	5e-06
rheumatoid arthritis	8_11502129	rs1600249	ENSG00000254507.2	DEFB131E	-501953	1.41e-06	0.487292	5e-06
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	2.29e-10	-0.609657	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	2.29e-10	-0.609657	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	2.29e-10	-0.609657	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	2.29e-10	-0.609657	3e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000226752.9	CUTALP	64195	4.24e-11	-0.640158	3e-09
rheumatoid arthritis	9_120890620	rs881375	ENSG00000056558.10	TRAF1	-38553	1.06e-13	0.344441	4e-08
rheumatoid arthritis	9_120890620	rs881375	ENSG00000226752.9	CUTALP	65792	7.2e-11	-0.601329	4e-08
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000226752.9	CUTALP	75512	1.67e-11	-0.652321	4e-12
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000056558.10	TRAF1	-28833	9.66e-05	0.202025	4e-12
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000056558.10	TRAF1	-23252	1.06e-13	0.344441	1e-10
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000226752.9	CUTALP	81093	7.2e-11	-0.601329	1e-10
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	1.18e-10	-0.603305	4e-07
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	1.18e-10	-0.603305	2e-08
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	1.18e-10	-0.603305	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	1.18e-10	-0.603305	4e-14
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000226752.9	CUTALP	108176	4.87e-11	-0.610251	2e-06
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000056558.10	TRAF1	3831	3.55e-14	0.352452	2e-06
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000056558.10	TRAF1	14931	3.55e-14	0.352452	6e-09
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000226752.9	CUTALP	119276	4.87e-11	-0.610251	6e-09
rheumatoid arthritis	9_136378050	rs3812565	ENSG00000160360.12	GPSM1	50574	2.42e-09	-0.258534	2e-09
rheumatoid arthritis	9_136378050	rs3812565	ENSG00000148384.12	INPP5E	-61773	3.3e-06	-0.263519	2e-09
rheumatoid arthritis	9_136395373	rs4266763	ENSG00000160360.12	GPSM1	67897	5.2e-10	-0.269705	1e-13
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	3.24e-05	-0.330672	1e-12
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	3.24e-05	-0.330672	3e-12
rheumatoid arthritis	X_154018741	rs1059702	ENSG00000177854.7	TMEM187	46414	1.91e-05	0.344124	5e-10
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	0.000103245	0.306358	4e-22
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	0.000103245	0.306358	5e-16
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	0.000103245	0.306358	3e-12