DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
rheumatoid arthritis	1_3412820	rs2493291	ENSG00000142611.16	PRDM16	343652	4.47e-06	0.570718	2e-14
rheumatoid arthritis	10_80462422	rs7100689	ENSG00000122359.17	ANXA11	256850	4.67e-06	0.294592	7e-08
rheumatoid arthritis	11_609888	rs12421158	ENSG00000174775.16	HRAS	72601	3.58e-06	-0.262915	4e-06
rheumatoid arthritis	11_61822009	rs28456	ENSG00000149485.18	FADS1	-7309	2.33e-05	-0.414991	4e-06
rheumatoid arthritis	11_633689	rs7929541	ENSG00000177042.14	TMEM80	-61844	1.11e-09	0.618104	2e-10
rheumatoid arthritis	11_72662452	rs3781913	ENSG00000186642.15	PDE2A	-12139	3.1e-19	0.905196	6e-10
rheumatoid arthritis	12_48021974	rs4760609	ENSG00000177981.10	ASB8	-159239	9.85e-06	0.407941	3e-12
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	2.06e-05	-0.4148	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.94e-29	1.14028	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	2.06e-05	-0.4148	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.94e-29	1.14028	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	2.06e-05	-0.4148	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.94e-29	1.14028	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	2.06e-05	-0.4148	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.94e-29	1.14028	2e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	3.53e-07	-0.510442	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	3.53e-07	-0.510442	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	3.53e-07	-0.510442	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	3.53e-07	-0.510442	1e-07
rheumatoid arthritis	13_39760715	rs9603612	ENSG00000133103.16	COG6	105088	5.35e-08	-0.37651	3e-13
rheumatoid arthritis	13_39776775	rs7993214	ENSG00000133103.16	COG6	121148	2.46e-07	0.351719	5e-06
rheumatoid arthritis	13_39781776	rs9532434	ENSG00000133103.16	COG6	126149	4.43e-07	0.342242	2e-19
rheumatoid arthritis	13_39793932	rs9603616	ENSG00000133103.16	COG6	138305	4.28e-07	-0.342533	8e-11
rheumatoid arthritis	13_39793932	rs9603616	ENSG00000133103.16	COG6	138305	4.28e-07	-0.342533	3e-11
rheumatoid arthritis	13_39793932	rs9603616	ENSG00000133103.16	COG6	138305	4.28e-07	-0.342533	2e-12
rheumatoid arthritis	13_39793932	rs9603616	ENSG00000133103.16	COG6	138305	4.28e-07	-0.342533	2e-12
rheumatoid arthritis	15_90350436	rs6496667	ENSG00000140575.12	IQGAP1	-37782	9.65e-19	0.727346	1e-06
rheumatoid arthritis	15_90483245	rs8040585	ENSG00000140575.12	IQGAP1	95027	8.27e-11	0.465498	2e-08
rheumatoid arthritis	2_201196097	rs3731714	ENSG00000240344.8	PPIL3	306794	8.07e-07	0.65214	7e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	2.54e-09	-0.916995	3e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	2.54e-09	-0.916995	5e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	2.54e-09	-0.916995	3e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	2.54e-09	-0.916995	2e-09
rheumatoid arthritis	21_33391982	rs73194058	ENSG00000142188.16	TMEM50B	-88029	2.29e-05	-0.729859	7e-08
rheumatoid arthritis	21_33391982	rs73194058	ENSG00000142188.16	TMEM50B	-88029	2.29e-05	-0.729859	3e-08
rheumatoid arthritis	21_33391982	rs73194058	ENSG00000142188.16	TMEM50B	-88029	2.29e-05	-0.729859	8e-07
rheumatoid arthritis	21_33391982	rs73194058	ENSG00000142188.16	TMEM50B	-88029	2.29e-05	-0.729859	1e-06
rheumatoid arthritis	22_30174033	rs1003342	ENSG00000214491.8	SEC14L6	-372649	2.57e-05	-0.430547	6e-10
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000164062.12	APEH	-13976	9.48e-05	0.284406	6e-06
rheumatoid arthritis	4_25415622	rs3816587	ENSG00000053900.10	ANAPC4	38409	9.28e-06	-0.317132	9e-06
rheumatoid arthritis	5_150858959	rs147018773	ENSG00000197083.11	ZNF300P1	-87330	9.23e-07	1.1054	2e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204338.8	CYP21A1P	-620137	3.2e-06	-0.751901	9e-09
rheumatoid arthritis	6_31654829	rs805297	ENSG00000213676.10	ATF6B	-473424	3.4e-12	0.583293	3e-10
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000229391.7	HLA-DRB6	-151826	2.13e-05	0.535256	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000237541.3	HLA-DQA2	-333146	9.54e-07	0.748254	2e-124
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000213676.10	ATF6B	293275	9.91e-07	0.409741	3e-10
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	2.93e-06	-0.481059	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.1e-10	0.585752	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	5.02e-07	-0.382778	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	2.93e-06	-0.481059	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.1e-10	0.585752	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	5.02e-07	-0.382778	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	2.93e-06	-0.481059	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.1e-10	0.585752	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	5.02e-07	-0.382778	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	2.93e-06	-0.481059	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.1e-10	0.585752	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	5.02e-07	-0.382778	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	2.93e-06	-0.481059	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.1e-10	0.585752	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	5.02e-07	-0.382778	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	2.93e-06	-0.481059	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.1e-10	0.585752	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	5.02e-07	-0.382778	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	2.93e-06	-0.481059	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.1e-10	0.585752	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	5.02e-07	-0.382778	3e-07
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000223534.1	HLA-DQB1-AS1	-183934	2.93e-06	-0.481059	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000229391.7	HLA-DRB6	-83601	1.1e-10	0.585752	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000196735.11	HLA-DQA1	-151758	5.02e-07	-0.382778	5e-58
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000196735.11	HLA-DQA1	-142020	1.27e-06	-0.379308	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000223534.1	HLA-DQB1-AS1	-174196	6.58e-06	-0.476482	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000229391.7	HLA-DRB6	-73863	7.39e-09	0.547719	6e-227
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000198502.5	HLA-DRB5	3080	4.52e-12	-0.649798	9e-52
rheumatoid arthritis	6_32606394	rs615672	ENSG00000198502.5	HLA-DRB5	76107	1.26e-07	-0.538395	8e-27
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.59e-06	0.642391	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.34e-13	0.922292	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	3.41e-07	0.552346	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.59e-06	0.642391	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.34e-13	0.922292	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	3.41e-07	0.552346	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.59e-06	0.642391	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.34e-13	0.922292	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	3.41e-07	0.552346	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.59e-06	0.642391	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.34e-13	0.922292	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	3.41e-07	0.552346	1e-108
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	1.77e-13	1.08875	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000232629.8	HLA-DQB2	-148661	2.18e-05	0.681669	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	2.5e-10	0.785748	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	1.77e-13	1.08875	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000232629.8	HLA-DQB2	-148661	2.18e-05	0.681669	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	2.5e-10	0.785748	5e-21
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000237541.3	HLA-DQA2	-125762	1.77e-13	1.08875	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000232629.8	HLA-DQB2	-147954	2.18e-05	0.681669	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000229391.7	HLA-DRB6	55558	2.5e-10	0.785748	2e-10
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000198502.5	HLA-DRB5	85678	2.98e-12	-0.703524	5e-07
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000229391.7	HLA-DRB6	69223	6.15e-10	0.771283	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000232629.8	HLA-DQB2	-134289	3.35e-05	0.667103	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000237541.3	HLA-DQA2	-112097	3.67e-13	1.07758	3e-11
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	1.8e-07	0.576423	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000232629.8	HLA-DQB2	-67460	2.21e-07	0.571486	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	1.8e-07	0.576423	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000232629.8	HLA-DQB2	-67460	2.21e-07	0.571486	1e-09
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000232629.8	HLA-DQB2	-67312	2.21e-07	0.571486	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000237541.3	HLA-DQA2	-45120	1.8e-07	0.576423	4e-186
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000237541.3	HLA-DQA2	-42012	4e-06	1.00676	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000237541.3	HLA-DQA2	-35545	4e-06	1.00676	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000237541.3	HLA-DQA2	-33596	4e-06	1.00676	2e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000237541.3	HLA-DQA2	-33485	4e-06	1.00676	5e-06
rheumatoid arthritis	6_32713151	rs7765379	ENSG00000237541.3	HLA-DQA2	-28191	4.16e-05	0.734174	5e-23
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000237541.3	HLA-DQA2	-27636	4e-06	1.00676	2e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000237541.3	HLA-DQA2	-27589	4e-06	1.00676	1e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000237541.3	HLA-DQA2	-27100	4e-06	1.00676	2e-06
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000153814.11	JAZF1	-45376	2.8e-06	0.389793	4e-09
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000153814.11	JAZF1	-45376	2.8e-06	0.389793	3e-09
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000153814.11	JAZF1	-45376	2.8e-06	0.389793	2e-06
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000153814.11	JAZF1	-45376	2.8e-06	0.389793	6e-06
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	3.5e-08	0.49441	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	9.29e-09	-0.630347	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	3.5e-08	0.49441	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	9.29e-09	-0.630347	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	3.5e-08	0.49441	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	9.29e-09	-0.630347	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	3.5e-08	0.49441	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	9.29e-09	-0.630347	3e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000056558.10	TRAF1	-40150	2.64e-07	0.459869	3e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000226752.9	CUTALP	64195	4.57e-09	-0.63309	3e-09
rheumatoid arthritis	9_120890620	rs881375	ENSG00000226752.9	CUTALP	65792	6.14e-06	-0.513581	4e-08
rheumatoid arthritis	9_120890620	rs881375	ENSG00000056558.10	TRAF1	-38553	8.24e-16	0.670023	4e-08
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000226752.9	CUTALP	75512	3.11e-09	-0.638544	4e-12
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000056558.10	TRAF1	-28833	2.21e-07	0.462206	4e-12
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000056558.10	TRAF1	-23252	6.08e-16	0.671569	1e-10
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000226752.9	CUTALP	81093	4.7e-06	-0.518815	1e-10
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	1.81e-08	-0.608127	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000056558.10	TRAF1	-7882	1.71e-08	0.494509	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	1.81e-08	-0.608127	4e-07
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000056558.10	TRAF1	-7882	1.71e-08	0.494509	4e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	1.81e-08	-0.608127	4e-14
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000056558.10	TRAF1	-1212	1.71e-08	0.494509	4e-14
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	1.81e-08	-0.608127	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000056558.10	TRAF1	-1212	1.71e-08	0.494509	2e-07
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000226752.9	CUTALP	108176	6.17e-06	-0.51266	2e-06
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000056558.10	TRAF1	3831	1.24e-16	0.682282	2e-06
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000226752.9	CUTALP	119276	6.17e-06	-0.51266	6e-09
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000056558.10	TRAF1	14931	1.24e-16	0.682282	6e-09
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	2.04e-07	-0.527249	1e-12
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	2.04e-07	-0.527249	3e-12
rheumatoid arthritis	X_154018741	rs1059702	ENSG00000177854.7	TMEM187	46414	2.04e-07	0.527249	5e-10
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	2.04e-07	0.527249	4e-22
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	2.04e-07	0.527249	5e-16
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	2.04e-07	0.527249	3e-12