DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE rheumatoid arthritis 11_633689 rs7929541 ENSG00000177042.14 TMEM80 -61844 2.1e-09 0.709709 2e-10 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 9.01e-22 0.963915 1e-10 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 9.01e-22 0.963915 1e-09 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 9.01e-22 0.963915 2e-08 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 9.01e-22 0.963915 9e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 8.24e-06 -0.470722 7e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 8.24e-06 -0.470722 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 8.24e-06 -0.470722 9e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 8.24e-06 -0.470722 1e-07 rheumatoid arthritis 15_90350436 rs6496667 ENSG00000140575.12 IQGAP1 -37782 4.9e-10 0.508716 1e-06 rheumatoid arthritis 15_90483245 rs8040585 ENSG00000140575.12 IQGAP1 95027 3e-08 0.356512 2e-08 rheumatoid arthritis 5_150858959 rs147018773 ENSG00000197083.11 ZNF300P1 -87330 2.27e-07 1.04604 2e-09 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000237541.3 HLA-DQA2 -333146 5.46e-07 0.794074 2e-124 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000198502.5 HLA-DRB5 -108759 6.8e-06 -0.500071 3e-10 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 2.62e-09 0.605148 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 1.99e-05 -0.262862 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 2.62e-09 0.605148 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 1.99e-05 -0.262862 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 2.62e-09 0.605148 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 1.99e-05 -0.262862 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 2.62e-09 0.605148 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 1.99e-05 -0.262862 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 2.62e-09 0.605148 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 1.99e-05 -0.262862 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 2.62e-09 0.605148 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 1.99e-05 -0.262862 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 2.62e-09 0.605148 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 1.99e-05 -0.262862 1e-100 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000196126.11 HLA-DRB1 -113427 8.37e-06 -0.272223 5e-58 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000229391.7 HLA-DRB6 -83601 4.67e-09 0.594907 5e-58 rheumatoid arthritis 6_32486159 rs112062732 ENSG00000229391.7 HLA-DRB6 -73863 7.03e-09 0.602827 6e-227 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000198502.5 HLA-DRB5 3080 1.47e-08 -0.625681 9e-52 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 9.42e-12 0.958901 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 9.42e-12 0.958901 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 9.42e-12 0.958901 1e-108 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 9.42e-12 0.958901 2e-08 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000229391.7 HLA-DRB6 54851 1.42e-06 0.700201 5e-21 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000237541.3 HLA-DQA2 -126469 3.54e-11 0.997348 5e-21 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000196126.11 HLA-DRB1 25025 1.39e-05 -0.369505 5e-21 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000229391.7 HLA-DRB6 54851 1.42e-06 0.700201 2e-10 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000237541.3 HLA-DQA2 -126469 3.54e-11 0.997348 2e-10 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000196126.11 HLA-DRB1 25025 1.39e-05 -0.369505 2e-10 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000196126.11 HLA-DRB1 25732 1.39e-05 -0.369505 2e-10 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000237541.3 HLA-DQA2 -125762 3.54e-11 0.997348 2e-10 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000229391.7 HLA-DRB6 55558 1.42e-06 0.700201 2e-10 rheumatoid arthritis 6_32615965 rs9271348 ENSG00000198502.5 HLA-DRB5 85678 2.82e-11 -0.761578 5e-07 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000237541.3 HLA-DQA2 -112097 3.54e-11 0.997348 3e-11 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000229391.7 HLA-DRB6 69223 1.42e-06 0.700201 3e-11 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000196126.11 HLA-DRB1 39397 1.39e-05 -0.369505 3e-11 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000179344.16 HLA-DQB1 27691 5.23e-08 -0.583119 5e-75 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000179344.16 HLA-DQB1 27691 5.23e-08 -0.583119 1e-09 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000179344.16 HLA-DQB1 27839 5.23e-08 -0.583119 4e-186 rheumatoid arthritis 6_32699330 rs9275334 ENSG00000237541.3 HLA-DQA2 -42012 1.16e-06 0.986525 2e-06 rheumatoid arthritis 6_32699330 rs9275334 ENSG00000229391.7 HLA-DRB6 139308 7.22e-06 0.838993 2e-06 rheumatoid arthritis 6_32705797 rs9275495 ENSG00000237541.3 HLA-DQA2 -35545 1.16e-06 0.986525 2e-06 rheumatoid arthritis 6_32705797 rs9275495 ENSG00000229391.7 HLA-DRB6 145775 7.22e-06 0.838993 2e-06 rheumatoid arthritis 6_32707746 rs9275530 ENSG00000229391.7 HLA-DRB6 147724 7.22e-06 0.838993 2e-06 rheumatoid arthritis 6_32707746 rs9275530 ENSG00000237541.3 HLA-DQA2 -33596 1.16e-06 0.986525 2e-06 rheumatoid arthritis 6_32707857 rs9275532 ENSG00000237541.3 HLA-DQA2 -33485 1.16e-06 0.986525 5e-06 rheumatoid arthritis 6_32707857 rs9275532 ENSG00000229391.7 HLA-DRB6 147835 7.22e-06 0.838993 5e-06 rheumatoid arthritis 6_32713706 rs7454108 ENSG00000229391.7 HLA-DRB6 153684 7.22e-06 0.838993 2e-06 rheumatoid arthritis 6_32713706 rs7454108 ENSG00000237541.3 HLA-DQA2 -27636 1.16e-06 0.986525 2e-06 rheumatoid arthritis 6_32713753 rs3957146 ENSG00000237541.3 HLA-DQA2 -27589 1.16e-06 0.986525 1e-06 rheumatoid arthritis 6_32713753 rs3957146 ENSG00000229391.7 HLA-DRB6 153731 7.22e-06 0.838993 1e-06 rheumatoid arthritis 6_32714242 rs3998159 ENSG00000237541.3 HLA-DQA2 -27100 1.16e-06 0.986525 2e-06 rheumatoid arthritis 6_32714242 rs3998159 ENSG00000229391.7 HLA-DRB6 154220 7.22e-06 0.838993 2e-06 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000226752.9 CUTALP 49015 1.44e-05 -0.49005 5e-11 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000056558.10 TRAF1 -55330 4.57e-06 0.319105 5e-11 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000226752.9 CUTALP 49015 1.44e-05 -0.49005 4e-09 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000056558.10 TRAF1 -55330 4.57e-06 0.319105 4e-09 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000226752.9 CUTALP 49015 1.44e-05 -0.49005 2e-08 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000056558.10 TRAF1 -55330 4.57e-06 0.319105 2e-08 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000226752.9 CUTALP 49015 1.44e-05 -0.49005 3e-09 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000056558.10 TRAF1 -55330 4.57e-06 0.319105 3e-09 rheumatoid arthritis 9_120889023 rs2072438 ENSG00000056558.10 TRAF1 -40150 9.2e-06 0.323813 3e-09 rheumatoid arthritis 9_120889023 rs2072438 ENSG00000226752.9 CUTALP 64195 2.15e-06 -0.553852 3e-09 rheumatoid arthritis 9_120890620 rs881375 ENSG00000056558.10 TRAF1 -38553 4.8e-13 0.462396 4e-08 rheumatoid arthritis 9_120890620 rs881375 ENSG00000226752.9 CUTALP 65792 1.47e-05 -0.48826 4e-08 rheumatoid arthritis 9_120900340 rs10760126 ENSG00000056558.10 TRAF1 -28833 9.2e-06 0.323813 4e-12 rheumatoid arthritis 9_120900340 rs10760126 ENSG00000226752.9 CUTALP 75512 2.15e-06 -0.553852 4e-12 rheumatoid arthritis 9_120905921 rs10435844 ENSG00000226752.9 CUTALP 81093 1.47e-05 -0.48826 1e-10 rheumatoid arthritis 9_120905921 rs10435844 ENSG00000056558.10 TRAF1 -23252 4.8e-13 0.462396 1e-10 rheumatoid arthritis 9_120921291 rs2269060 ENSG00000056558.10 TRAF1 -7882 6.61e-07 0.338036 2e-08 rheumatoid arthritis 9_120921291 rs2269060 ENSG00000226752.9 CUTALP 96463 9.8e-06 -0.491703 2e-08 rheumatoid arthritis 9_120921291 rs2269060 ENSG00000056558.10 TRAF1 -7882 6.61e-07 0.338036 4e-07 rheumatoid arthritis 9_120921291 rs2269060 ENSG00000226752.9 CUTALP 96463 9.8e-06 -0.491703 4e-07 rheumatoid arthritis 9_120927961 rs3761847 ENSG00000056558.10 TRAF1 -1212 6.61e-07 0.338036 4e-14 rheumatoid arthritis 9_120927961 rs3761847 ENSG00000226752.9 CUTALP 103133 9.8e-06 -0.491703 4e-14 rheumatoid arthritis 9_120927961 rs3761847 ENSG00000056558.10 TRAF1 -1212 6.61e-07 0.338036 2e-07 rheumatoid arthritis 9_120927961 rs3761847 ENSG00000226752.9 CUTALP 103133 9.8e-06 -0.491703 2e-07 rheumatoid arthritis 9_120933004 rs10739580 ENSG00000056558.10 TRAF1 3831 2.35e-13 0.470463 2e-06 rheumatoid arthritis 9_120933004 rs10739580 ENSG00000226752.9 CUTALP 108176 9.02e-06 -0.502803 2e-06 rheumatoid arthritis 9_120944104 rs2900180 ENSG00000056558.10 TRAF1 14931 2.35e-13 0.470463 6e-09 rheumatoid arthritis 9_120944104 rs2900180 ENSG00000226752.9 CUTALP 119276 9.02e-06 -0.502803 6e-09 rheumatoid arthritis X_153982797 rs13397 ENSG00000177854.7 TMEM187 10470 1.27e-07 -0.51948 1e-12 rheumatoid arthritis X_153982797 rs13397 ENSG00000177854.7 TMEM187 10470 1.27e-07 -0.51948 3e-12 rheumatoid arthritis X_154018741 rs1059702 ENSG00000177854.7 TMEM187 46414 1.27e-07 0.51948 5e-10 rheumatoid arthritis X_154036016 rs5987194 ENSG00000177854.7 TMEM187 63689 4.67e-06 0.459759 3e-12 rheumatoid arthritis X_154036016 rs5987194 ENSG00000177854.7 TMEM187 63689 4.67e-06 0.459759 5e-16 rheumatoid arthritis X_154036016 rs5987194 ENSG00000177854.7 TMEM187 63689 4.67e-06 0.459759 4e-22