DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE rheumatoid arthritis 1_113891324 rs1217393 ENSG00000134262.12 AP4B1 -13816 2.48e-06 -0.147345 5e-09 rheumatoid arthritis 1_154452980 rs12126142 ENSG00000160712.12 IL6R 47787 4.52e-05 -0.281985 1e-10 rheumatoid arthritis 1_154454494 rs8192284 ENSG00000160712.12 IL6R 49301 5.48e-05 -0.278901 2e-07 rheumatoid arthritis 1_154454494 rs2228145 ENSG00000160712.12 IL6R 49301 5.48e-05 -0.278901 1e-07 rheumatoid arthritis 1_154454494 rs2228145 ENSG00000160712.12 IL6R 49301 5.48e-05 -0.278901 5e-06 rheumatoid arthritis 1_154454494 rs2228145 ENSG00000160712.12 IL6R 49301 5.48e-05 -0.278901 5e-06 rheumatoid arthritis 1_154454494 rs8192284 ENSG00000160712.12 IL6R 49301 5.48e-05 -0.278901 1e-08 rheumatoid arthritis 1_154454494 rs2228145 ENSG00000160712.12 IL6R 49301 5.48e-05 -0.278901 3e-09 rheumatoid arthritis 1_154454494 rs2228145 ENSG00000160712.12 IL6R 49301 5.48e-05 -0.278901 4e-09 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000225217.1 HSPA7 -171028 7.21e-08 -0.53151 2e-06 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000244682.7 FCGR2C -146076 7.8e-09 -0.599209 2e-06 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000225217.1 HSPA7 -171028 7.21e-08 -0.53151 5e-07 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000244682.7 FCGR2C -146076 7.8e-09 -0.599209 5e-07 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000225217.1 HSPA7 -171028 7.21e-08 -0.53151 1e-07 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000244682.7 FCGR2C -146076 7.8e-09 -0.599209 1e-07 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000225217.1 HSPA7 -171028 7.21e-08 -0.53151 1e-06 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000244682.7 FCGR2C -146076 7.8e-09 -0.599209 1e-06 rheumatoid arthritis 1_161505960 rs10494360 ENSG00000225217.1 HSPA7 -100331 1.25e-08 -0.57834 3e-07 rheumatoid arthritis 1_161505960 rs10494360 ENSG00000244682.7 FCGR2C -75379 1.13e-08 -0.61238 3e-07 rheumatoid arthritis 1_2596694 rs2843401 ENSG00000215912.12 TTC34 -205023 2.15e-05 -0.169112 7e-10 rheumatoid arthritis 1_2596694 rs2843401 ENSG00000215912.12 TTC34 -205023 2.15e-05 -0.169112 4e-08 rheumatoid arthritis 1_2596694 rs2843401 ENSG00000215912.12 TTC34 -205023 2.15e-05 -0.169112 7e-12 rheumatoid arthritis 1_2603539 rs6664969 ENSG00000215912.12 TTC34 -198178 3.6e-05 0.162474 1e-08 rheumatoid arthritis 1_2608357 rs4073285 ENSG00000215912.12 TTC34 -193360 1.14e-05 0.173029 2e-13 rheumatoid arthritis 1_2622185 rs3890745 ENSG00000215912.12 TTC34 -179532 9.85e-06 0.173263 4e-06 rheumatoid arthritis 1_2622185 rs3890745 ENSG00000215912.12 TTC34 -179532 9.85e-06 0.173263 1e-07 rheumatoid arthritis 1_2622185 rs3890745 ENSG00000215912.12 TTC34 -179532 9.85e-06 0.173263 2e-08 rheumatoid arthritis 1_2622185 rs3890745 ENSG00000215912.12 TTC34 -179532 9.85e-06 0.173263 1e-06 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000204084.12 INPP5B -134150 2.22e-15 0.488529 3e-12 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000204084.12 INPP5B -134150 2.22e-15 0.488529 6e-09 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000204084.12 INPP5B -134150 2.22e-15 0.488529 6e-12 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000204084.12 INPP5B -134150 2.22e-15 0.488529 2e-11 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000204084.12 INPP5B -134150 2.22e-15 0.488529 5e-09 rheumatoid arthritis 10_99530544 rs6584283 ENSG00000257582.5 LINC01475 -633 6.16e-30 -0.654282 3e-10 rheumatoid arthritis 10_99538694 rs1332099 ENSG00000257582.5 LINC01475 7517 8.17e-24 -0.581141 5e-10 rheumatoid arthritis 11_609888 rs12421158 ENSG00000174775.16 HRAS 72601 8.75e-05 -0.118755 4e-06 rheumatoid arthritis 11_609888 rs12421158 ENSG00000177042.14 TMEM80 -85645 3.7e-13 0.455929 4e-06 rheumatoid arthritis 11_61138978 rs508970 ENSG00000110448.10 CD5 36583 1.52e-07 -0.29156 4e-06 rheumatoid arthritis 11_61138978 rs508970 ENSG00000110448.10 CD5 36583 1.52e-07 -0.29156 3e-06 rheumatoid arthritis 11_61142109 rs595158 ENSG00000110448.10 CD5 39714 1.34e-06 -0.259603 3e-08 rheumatoid arthritis 11_61142109 rs595158 ENSG00000110448.10 CD5 39714 1.34e-06 -0.259603 6e-06 rheumatoid arthritis 11_61142109 rs595158 ENSG00000110448.10 CD5 39714 1.34e-06 -0.259603 6e-06 rheumatoid arthritis 11_61822009 rs28456 ENSG00000134825.15 TMEM258 29373 1.52e-06 0.180103 4e-06 rheumatoid arthritis 11_61822009 rs28456 ENSG00000134824.13 FADS2 5753 6.91e-10 0.322437 4e-06 rheumatoid arthritis 11_61822009 rs28456 ENSG00000149485.18 FADS1 -7309 9.75e-10 -0.28454 4e-06 rheumatoid arthritis 11_61828092 rs968567 ENSG00000134825.15 TMEM258 35456 2.49e-06 0.22934 2e-08 rheumatoid arthritis 11_61828092 rs968567 ENSG00000134824.13 FADS2 11836 2.58e-29 0.704929 2e-08 rheumatoid arthritis 11_61828092 rs968567 ENSG00000134825.15 TMEM258 35456 2.49e-06 0.22934 7e-07 rheumatoid arthritis 11_61828092 rs968567 ENSG00000134824.13 FADS2 11836 2.58e-29 0.704929 7e-07 rheumatoid arthritis 11_633689 rs7929541 ENSG00000174775.16 HRAS 96402 3.13e-08 -0.156944 2e-10 rheumatoid arthritis 11_633689 rs7929541 ENSG00000177042.14 TMEM80 -61844 2.31e-22 0.55841 2e-10 rheumatoid arthritis 11_64275525 rs660442 ENSG00000168071.21 CCDC88B -64698 1.08e-05 -0.224668 1e-09 rheumatoid arthritis 11_64275525 rs660442 ENSG00000173457.10 PPP1R14B 28587 1.1e-06 -0.206846 1e-09 rheumatoid arthritis 12_111446804 rs3184504 ENSG00000198270.12 TMEM116 -566381 8.01e-05 0.198697 6e-06 rheumatoid arthritis 12_112172910 rs11066188 ENSG00000198270.12 TMEM116 159725 6.81e-05 -0.1993 9e-10 rheumatoid arthritis 12_112433568 rs11066301 ENSG00000198270.12 TMEM116 420383 4.66e-05 -0.202429 4e-08 rheumatoid arthritis 12_48021974 rs4760609 ENSG00000139620.12 KANSL2 -660264 0.000138952 -0.228003 3e-12 rheumatoid arthritis 12_48021974 rs4760609 ENSG00000167528.12 ZNF641 -329440 7.87e-05 0.253468 3e-12 rheumatoid arthritis 12_56001170 rs773125 ENSG00000139531.12 SUOX 3990 4.46e-21 -0.358868 1e-09 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 1.29e-63 1.02631 1e-09 rheumatoid arthritis 12_56001170 rs773125 ENSG00000139531.12 SUOX 3990 4.46e-21 -0.358868 2e-08 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 1.29e-63 1.02631 2e-08 rheumatoid arthritis 12_56001170 rs773125 ENSG00000139531.12 SUOX 3990 4.46e-21 -0.358868 1e-10 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 1.29e-63 1.02631 1e-10 rheumatoid arthritis 12_56001170 rs773125 ENSG00000139531.12 SUOX 3990 4.46e-21 -0.358868 9e-08 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 1.29e-63 1.02631 9e-08 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000123427.16 EEF1AKMT3 -196674 1.46e-06 0.259969 9e-08 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000166896.7 ATP23 -366609 5.92e-06 -0.299825 9e-08 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000123297.17 TSFM -207657 0.000127199 -0.142062 9e-08 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000123427.16 EEF1AKMT3 -196674 1.46e-06 0.259969 1e-07 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000166896.7 ATP23 -366609 5.92e-06 -0.299825 1e-07 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000123297.17 TSFM -207657 0.000127199 -0.142062 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000135506.15 OS9 20314 1.79e-06 0.14087 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123297.17 TSFM -68320 4.62e-12 0.23741 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 1.53e-14 -0.383074 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000135506.15 OS9 20314 1.79e-06 0.14087 7e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123297.17 TSFM -68320 4.62e-12 0.23741 7e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 1.53e-14 -0.383074 7e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000135506.15 OS9 20314 1.79e-06 0.14087 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123297.17 TSFM -68320 4.62e-12 0.23741 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 1.53e-14 -0.383074 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000135506.15 OS9 20314 1.79e-06 0.14087 9e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123297.17 TSFM -68320 4.62e-12 0.23741 9e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 1.53e-14 -0.383074 9e-08 rheumatoid arthritis 13_39760715 rs9603612 ENSG00000133103.16 COG6 105088 4.55e-07 -0.242436 3e-13 rheumatoid arthritis 13_39776775 rs7993214 ENSG00000133103.16 COG6 121148 6.11e-06 0.216699 5e-06 rheumatoid arthritis 13_39781776 rs9532434 ENSG00000133103.16 COG6 126149 2.51e-06 0.225673 2e-19 rheumatoid arthritis 13_39793932 rs9603616 ENSG00000133103.16 COG6 138305 2.56e-06 -0.225498 3e-11 rheumatoid arthritis 13_39793932 rs9603616 ENSG00000133103.16 COG6 138305 2.56e-06 -0.225498 2e-12 rheumatoid arthritis 13_39793932 rs9603616 ENSG00000133103.16 COG6 138305 2.56e-06 -0.225498 2e-12 rheumatoid arthritis 13_39793932 rs9603616 ENSG00000133103.16 COG6 138305 2.56e-06 -0.225498 8e-11 rheumatoid arthritis 13_39797240 rs9603618 ENSG00000133103.16 COG6 141613 1.26e-05 -0.221055 5e-09 rheumatoid arthritis 14_104919812 rs2841269 ENSG00000140104.13 CLBA1 -65963 2.16e-05 0.23226 2e-16 rheumatoid arthritis 14_104924668 rs2841277 ENSG00000140104.13 CLBA1 -61107 1.42e-06 0.270588 2e-14 rheumatoid arthritis 15_90350436 rs6496667 ENSG00000196391.10 ZNF774 -1809 4.12e-05 0.181578 1e-06 rheumatoid arthritis 15_90350436 rs6496667 ENSG00000140575.12 IQGAP1 -37782 8.77e-11 0.243851 1e-06 rheumatoid arthritis 15_90483245 rs8040585 ENSG00000140575.12 IQGAP1 95027 9.26e-07 0.164792 2e-08 rheumatoid arthritis 15_90483245 rs8040585 ENSG00000196391.10 ZNF774 131000 1.9e-05 0.166104 2e-08 rheumatoid arthritis 16_23877519 rs7404928 ENSG00000166501.12 PRKCB 41518 4.18e-23 0.559093 4e-06 rheumatoid arthritis 16_30615295 rs12918327 ENSG00000103510.19 KAT8 -500459 1.87e-08 0.23458 3e-08 rheumatoid arthritis 16_30615295 rs12918327 ENSG00000103549.21 RNF40 -147823 1.33e-05 0.166998 3e-08 rheumatoid arthritis 16_50722970 rs2076756 ENSG00000261644.2 CYLD-AS1 -19789 6.87e-05 0.254756 5e-13 rheumatoid arthritis 17_39877024 rs1054609 ENSG00000167914.11 GSDMA -76239 2.12e-12 0.462097 6e-07 rheumatoid arthritis 17_39884510 rs2872507 ENSG00000167914.11 GSDMA -68753 2.12e-12 0.462097 3e-09 rheumatoid arthritis 17_39884510 rs2872507 ENSG00000167914.11 GSDMA -68753 2.12e-12 0.462097 9e-07 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000167914.11 GSDMA -65867 9.95e-12 0.464691 1e-10 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000167914.11 GSDMA -65867 9.95e-12 0.464691 4e-07 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000167914.11 GSDMA -65867 9.95e-12 0.464691 7e-07 rheumatoid arthritis 17_39905943 rs2305480 ENSG00000167914.11 GSDMA -47320 8.94e-12 0.474543 4e-09 rheumatoid arthritis 18_12797695 rs2847297 ENSG00000260302.1 LINC01882 21772 1.37e-09 0.472602 3e-14 rheumatoid arthritis 18_12797695 rs2847297 ENSG00000260302.1 LINC01882 21772 1.37e-09 0.472602 3e-08 rheumatoid arthritis 18_12797695 rs2847297 ENSG00000260302.1 LINC01882 21772 1.37e-09 0.472602 2e-08 rheumatoid arthritis 18_12881362 rs8083786 ENSG00000260302.1 LINC01882 105439 6.89e-07 0.495169 8e-09 rheumatoid arthritis 18_12881362 rs8083786 ENSG00000260302.1 LINC01882 105439 6.89e-07 0.495169 1e-07 rheumatoid arthritis 18_12881362 rs8083786 ENSG00000260302.1 LINC01882 105439 6.89e-07 0.495169 6e-18 rheumatoid arthritis 18_12881362 rs8083786 ENSG00000260302.1 LINC01882 105439 6.89e-07 0.495169 2e-15 rheumatoid arthritis 18_12881362 rs8083786 ENSG00000260302.1 LINC01882 105439 6.89e-07 0.495169 2e-11 rheumatoid arthritis 18_12881362 rs8083786 ENSG00000260302.1 LINC01882 105439 6.89e-07 0.495169 2e-10 rheumatoid arthritis 19_10351837 rs11085725 ENSG00000105397.13 TYK2 -28839 6.42e-07 0.158683 3e-10 rheumatoid arthritis 19_10661265 rs147622113 ENSG00000065989.15 PDE4A 244492 3.32e-05 -0.45142 9e-10 rheumatoid arthritis 19_10661265 rs147622113 ENSG00000065989.15 PDE4A 244492 3.32e-05 -0.45142 1e-09 rheumatoid arthritis 2_191068557 rs13389408 ENSG00000138378.17 STAT4 -83039 5.33e-05 -0.297369 3e-17 rheumatoid arthritis 2_201196097 rs3731714 ENSG00000240344.8 PPIL3 306794 8.5e-08 0.371106 7e-09 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000240344.8 PPIL3 400371 4.2e-14 -0.714435 5e-07 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000240344.8 PPIL3 400371 4.2e-14 -0.714435 2e-09 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000240344.8 PPIL3 400371 4.2e-14 -0.714435 3e-09 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000240344.8 PPIL3 400371 4.2e-14 -0.714435 3e-07 rheumatoid arthritis 2_60841032 rs1432296 ENSG00000162927.13 PUS10 -177129 9.53e-13 0.528265 8e-10 rheumatoid arthritis 2_60897715 rs34695944 ENSG00000162927.13 PUS10 -120446 9.87e-08 0.313786 3e-08 rheumatoid arthritis 2_60897715 rs34695944 ENSG00000162927.13 PUS10 -120446 9.87e-08 0.313786 2e-15 rheumatoid arthritis 2_60897715 rs34695944 ENSG00000162927.13 PUS10 -120446 9.87e-08 0.313786 2e-13 rheumatoid arthritis 2_60897715 rs34695944 ENSG00000162927.13 PUS10 -120446 9.87e-08 0.313786 4e-13 rheumatoid arthritis 2_60897715 rs34695944 ENSG00000162927.13 PUS10 -120446 9.87e-08 0.313786 4e-06 rheumatoid arthritis 2_60897715 rs34695944 ENSG00000162927.13 PUS10 -120446 9.87e-08 0.313786 4e-16 rheumatoid arthritis 2_60897715 rs34695944 ENSG00000162927.13 PUS10 -120446 9.87e-08 0.313786 5e-14 rheumatoid arthritis 2_60908994 rs13031237 ENSG00000162927.13 PUS10 -109167 9.66e-08 0.312725 1e-09 rheumatoid arthritis 2_60908994 rs13031237 ENSG00000162927.13 PUS10 -109167 9.66e-08 0.312725 1e-11 rheumatoid arthritis 2_60908994 rs13031237 ENSG00000162927.13 PUS10 -109167 9.66e-08 0.312725 8e-07 rheumatoid arthritis 2_60937196 rs13017599 ENSG00000162927.13 PUS10 -80965 1.51e-07 0.305897 2e-12 rheumatoid arthritis 20_46105671 rs6032662 ENSG00000101017.13 CD40 -12601 8.58e-09 0.294727 1e-09 rheumatoid arthritis 20_46118343 rs1883832 ENSG00000101017.13 CD40 71 8.16e-09 0.300514 9e-15 rheumatoid arthritis 20_46118343 rs1883832 ENSG00000101017.13 CD40 71 8.16e-09 0.300514 1e-16 rheumatoid arthritis 20_46118343 rs1883832 ENSG00000101017.13 CD40 71 8.16e-09 0.300514 2e-13 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000101017.13 CD40 1036 4.59e-09 0.303583 9e-11 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000101017.13 CD40 1036 4.59e-09 0.303583 2e-07 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000101017.13 CD40 1036 4.59e-09 0.303583 8e-09 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000101017.13 CD40 1036 4.59e-09 0.303583 3e-09 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000101017.13 CD40 2340 2.2e-08 0.278144 4e-18 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000101017.13 CD40 2340 2.2e-08 0.278144 3e-14 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000101017.13 CD40 2340 2.2e-08 0.278144 1e-16 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000101017.13 CD40 2340 2.2e-08 0.278144 4e-14 rheumatoid arthritis 21_41139991 rs2837960 ENSG00000226496.2 LINC00323 -8142 8.5e-08 0.433394 2e-06 rheumatoid arthritis 22_21561877 rs5754100 ENSG00000161180.10 CCDC116 -70839 1.11e-18 -0.646217 9e-09 rheumatoid arthritis 22_21561877 rs5754100 ENSG00000161179.13 YDJC -68187 5.29e-05 0.222372 9e-09 rheumatoid arthritis 22_21562072 rs5754104 ENSG00000161180.10 CCDC116 -70644 5.94e-18 -0.64348 1e-10 rheumatoid arthritis 22_21602364 rs2283790 ENSG00000161180.10 CCDC116 -30352 2.28e-18 -0.62464 2e-11 rheumatoid arthritis 22_21602364 rs2283790 ENSG00000161179.13 YDJC -27700 6.95e-06 0.240048 2e-11 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000161180.10 CCDC116 -7909 2.4e-16 -0.606487 2e-09 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000161179.13 YDJC -5257 6.88e-05 0.219099 2e-09 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000161180.10 CCDC116 -7909 2.4e-16 -0.606487 6e-07 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000161179.13 YDJC -5257 6.88e-05 0.219099 6e-07 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000161180.10 CCDC116 -7909 2.4e-16 -0.606487 2e-07 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000161179.13 YDJC -5257 6.88e-05 0.219099 2e-07 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000161180.10 CCDC116 -7909 2.4e-16 -0.606487 4e-06 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000161179.13 YDJC -5257 6.88e-05 0.219099 4e-06 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000161180.10 CCDC116 -7909 2.4e-16 -0.606487 1e-09 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000161179.13 YDJC -5257 6.88e-05 0.219099 1e-09 rheumatoid arthritis 22_21625000 rs4821124 ENSG00000161179.13 YDJC -5064 2.8e-05 0.230359 2e-11 rheumatoid arthritis 22_21625000 rs4821124 ENSG00000161180.10 CCDC116 -7716 6.38e-18 -0.634151 2e-11 rheumatoid arthritis 22_21630805 rs5754467 ENSG00000161180.10 CCDC116 -1911 2.21e-15 -0.57935 1e-13 rheumatoid arthritis 22_21630805 rs5754467 ENSG00000161179.13 YDJC 741 5.31e-06 0.245413 1e-13 rheumatoid arthritis 22_30174033 rs1003342 ENSG00000128342.4 LIF -70900 2.06e-05 -0.206767 6e-10 rheumatoid arthritis 3_49660026 rs9836291 ENSG00000004534.14 RBM6 -279981 5.52e-11 0.288304 6e-06 rheumatoid arthritis 3_49660026 rs9836291 ENSG00000235908.1 RHOA-IT1 293020 0.000326113 0.228986 6e-06 rheumatoid arthritis 3_49660026 rs9836291 ENSG00000145020.15 AMT 237273 0.000212647 0.125402 6e-06 rheumatoid arthritis 3_49660026 rs9836291 ENSG00000173531.15 MST1 -29472 4.73e-05 0.179964 6e-06 rheumatoid arthritis 3_49660026 rs9836291 ENSG00000068745.14 IP6K2 919673 9.45e-05 -0.139235 6e-06 rheumatoid arthritis 3_49660026 rs9836291 ENSG00000187492.8 CDHR4 -139809 7.12e-05 -0.199105 6e-06 rheumatoid arthritis 3_49660026 rs9836291 ENSG00000145029.13 NICN1 230700 2.03e-07 0.180927 6e-06 rheumatoid arthritis 3_49660026 rs9836291 ENSG00000164068.15 RNF123 -29476 9.42e-09 -0.167314 6e-06 rheumatoid arthritis 3_49674864 rs11130213 ENSG00000145029.13 NICN1 245538 1.57e-07 0.184063 5e-07 rheumatoid arthritis 3_49674864 rs11130213 ENSG00000164068.15 RNF123 -14638 5.68e-09 -0.171072 5e-07 rheumatoid arthritis 3_49674864 rs11130213 ENSG00000173531.15 MST1 -14634 2.42e-05 0.188127 5e-07 rheumatoid arthritis 3_49674864 rs11130213 ENSG00000004534.14 RBM6 -265143 2.4e-09 0.266497 5e-07 rheumatoid arthritis 3_49674864 rs11130213 ENSG00000068745.14 IP6K2 934511 7.88e-05 -0.141941 5e-07 rheumatoid arthritis 3_49674864 rs11130213 ENSG00000145020.15 AMT 252111 0.000191027 0.127366 5e-07 rheumatoid arthritis 3_58317208 rs73081554 ENSG00000163684.11 RPP14 10961 1.37e-06 -0.453262 5e-08 rheumatoid arthritis 3_58317208 rs73081554 ENSG00000163684.11 RPP14 10961 1.37e-06 -0.453262 5e-08 rheumatoid arthritis 3_58317208 rs73081554 ENSG00000163684.11 RPP14 10961 1.37e-06 -0.453262 1e-08 rheumatoid arthritis 4_122297158 rs13119723 ENSG00000138685.13 FGF2 -529550 6.71e-05 0.234275 7e-07 rheumatoid arthritis 4_25415622 rs3816587 ENSG00000053900.10 ANAPC4 38409 5.71e-32 -0.497711 9e-06 rheumatoid arthritis 4_971932 rs13101828 ENSG00000145214.13 DGKQ -14963 2.03e-17 0.298807 1e-08 rheumatoid arthritis 4_971932 rs13101828 ENSG00000127415.12 IDUA -15065 2.27e-11 0.23747 1e-08 rheumatoid arthritis 4_971932 rs13101828 ENSG00000145217.13 SLC26A1 -21508 3.15e-16 -0.513182 1e-08 rheumatoid arthritis 5_103261019 rs26232 ENSG00000145725.19 PPIP5K2 140867 4.36e-05 -0.124633 4e-08 rheumatoid arthritis 5_103261019 rs26232 ENSG00000175749.11 EIF3KP1 228643 3.65e-07 0.413562 4e-08 rheumatoid arthritis 5_103261591 rs39984 ENSG00000145725.19 PPIP5K2 141439 4.36e-05 -0.124633 3e-06 rheumatoid arthritis 5_103261591 rs39984 ENSG00000175749.11 EIF3KP1 229215 3.65e-07 0.413562 3e-06 rheumatoid arthritis 5_103261591 rs39984 ENSG00000145725.19 PPIP5K2 141439 4.36e-05 -0.124633 9e-08 rheumatoid arthritis 5_103261591 rs39984 ENSG00000175749.11 EIF3KP1 229215 3.65e-07 0.413562 9e-08 rheumatoid arthritis 5_103268000 rs403214 ENSG00000145725.19 PPIP5K2 147848 6.08e-05 -0.124521 4e-10 rheumatoid arthritis 5_103268000 rs403214 ENSG00000175749.11 EIF3KP1 235624 3.35e-07 0.422253 4e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000175749.11 EIF3KP1 240847 2.18e-07 0.433509 6e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145725.19 PPIP5K2 153071 8.62e-05 -0.12342 6e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000175749.11 EIF3KP1 240847 2.18e-07 0.433509 9e-08 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145725.19 PPIP5K2 153071 8.62e-05 -0.12342 9e-08 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000175749.11 EIF3KP1 240847 2.18e-07 0.433509 7e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145725.19 PPIP5K2 153071 8.62e-05 -0.12342 7e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000175749.11 EIF3KP1 240847 2.18e-07 0.433509 1e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145725.19 PPIP5K2 153071 8.62e-05 -0.12342 1e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000175749.11 EIF3KP1 240847 2.18e-07 0.433509 2e-11 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145725.19 PPIP5K2 153071 8.62e-05 -0.12342 2e-11 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000175749.11 EIF3KP1 240847 2.18e-07 0.433509 5e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145725.19 PPIP5K2 153071 8.62e-05 -0.12342 5e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000175749.11 EIF3KP1 240847 2.18e-07 0.433509 1e-09 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145725.19 PPIP5K2 153071 8.62e-05 -0.12342 1e-09 rheumatoid arthritis 5_10704685 rs2918392 ENSG00000112977.15 DAP -56587 6.26e-07 -0.219369 5e-08 rheumatoid arthritis 5_132094425 rs657075 ENSG00000164398.12 ACSL6 82182 1.01e-16 0.914739 8e-07 rheumatoid arthritis 5_132094425 rs657075 ENSG00000164398.12 ACSL6 82182 1.01e-16 0.914739 8e-06 rheumatoid arthritis 5_132094425 rs657075 ENSG00000164398.12 ACSL6 82182 1.01e-16 0.914739 3e-10 rheumatoid arthritis 5_132094425 rs657075 ENSG00000164398.12 ACSL6 82182 1.01e-16 0.914739 6e-06 rheumatoid arthritis 5_132094425 rs657075 ENSG00000164398.12 ACSL6 82182 1.01e-16 0.914739 1e-06 rheumatoid arthritis 5_132461855 rs6894249 ENSG00000197536.11 IRF1-AS1 51219 3.24e-05 -0.212718 1e-14 rheumatoid arthritis 5_150858959 rs147018773 ENSG00000145908.12 ZNF300 -46024 8.74e-11 0.502966 2e-09 rheumatoid arthritis 5_150858959 rs147018773 ENSG00000197083.11 ZNF300P1 -87330 7.01e-29 1.17309 2e-09 rheumatoid arthritis 5_151055333 rs6579837 ENSG00000145901.14 TNIP1 -38244 8.45e-06 0.223699 2e-06 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204463.12 BAG6 -267153 0.000117597 -0.254383 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000244731.7 C4A -596472 4.93e-15 -0.624366 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204525.16 HLA-C 113447 3.47e-08 0.537797 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204338.8 CYP21A1P -620137 2.45e-12 -0.67632 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000250535.1 STK19B -627718 2.57e-06 -0.573322 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204531.17 POU5F1 204821 1.88e-06 0.466355 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204540.10 PSORS1C1 270802 5.28e-07 -0.59082 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204536.13 CCHCR1 227314 8.94e-09 0.332333 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204516.9 MICB -109329 8.22e-05 0.331069 9e-09 rheumatoid arthritis 6_31654829 rs805297 ENSG00000204435.13 CSNK2B -10562 8.34e-09 -0.204002 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000213676.10 ATF6B -473424 2.82e-07 0.226043 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000204463.12 BAG6 2124 1.89e-15 0.321053 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000277402.1 MIR6891 299513 0.00010152 0.299029 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000204536.13 CCHCR1 496591 0.000103849 -0.145934 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000204338.8 CYP21A1P -350860 3.04e-09 0.370837 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000204525.16 HLA-C 382724 3.71e-06 -0.290975 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000231852.6 CYP21A2 -383436 1.25e-05 0.263415 3e-10 rheumatoid arthritis 6_32315077 rs6910071 ENSG00000237541.3 HLA-DQA2 -426265 8.95e-08 0.5292 1e-299 rheumatoid arthritis 6_32315077 rs6910071 ENSG00000229391.7 HLA-DRB6 -244945 1.81e-06 0.462786 1e-299 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000229391.7 HLA-DRB6 -151826 1.94e-16 0.73928 2e-124 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000237541.3 HLA-DQA2 -333146 1.62e-20 0.842373 2e-124 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000229391.7 HLA-DRB6 -138494 1.09e-07 0.409832 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000204344.14 STK19 450362 8.23e-05 -0.155576 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000250535.1 STK19B 408258 5.87e-06 0.328529 3e-10 rheumatoid arthritis 6_32446496 rs3129890 ENSG00000204516.9 MICB 951615 8.31e-05 0.223433 1e-10 rheumatoid arthritis 6_32446496 rs3129890 ENSG00000198502.5 HLA-DRB5 -83791 9.7e-10 -0.53397 1e-10 rheumatoid arthritis 6_32446496 rs3129890 ENSG00000244731.7 C4A 464472 4.31e-06 -0.256919 1e-10 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000244731.7 C4A 465279 3.54e-10 -0.375433 2e-09 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000198502.5 HLA-DRB5 -82984 5.34e-07 -0.482282 2e-09 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000204338.8 CYP21A1P 441614 2.04e-05 -0.311274 2e-09 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000204516.9 MICB 952422 4.8e-05 0.251079 2e-09 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 1.8e-06 -0.281261 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000250535.1 STK19B 447725 0.000110348 0.294844 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 5.43e-30 0.838146 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 2.58e-14 0.614187 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 1.8e-06 -0.281261 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000250535.1 STK19B 447725 0.000110348 0.294844 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 5.43e-30 0.838146 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 2.58e-14 0.614187 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 1.8e-06 -0.281261 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000250535.1 STK19B 447725 0.000110348 0.294844 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 5.43e-30 0.838146 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 2.58e-14 0.614187 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 1.8e-06 -0.281261 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000250535.1 STK19B 447725 0.000110348 0.294844 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 5.43e-30 0.838146 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 2.58e-14 0.614187 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 1.8e-06 -0.281261 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000250535.1 STK19B 447725 0.000110348 0.294844 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 5.43e-30 0.838146 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 2.58e-14 0.614187 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 1.8e-06 -0.281261 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000250535.1 STK19B 447725 0.000110348 0.294844 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 5.43e-30 0.838146 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 2.58e-14 0.614187 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 1.8e-06 -0.281261 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000250535.1 STK19B 447725 0.000110348 0.294844 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 5.43e-30 0.838146 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 2.58e-14 0.614187 1e-250 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000223534.1 HLA-DQB1-AS1 -183934 4.38e-06 -0.272126 5e-58 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000237541.3 HLA-DQA2 -264921 3.14e-14 0.614992 5e-58 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000229391.7 HLA-DRB6 -83601 1.29e-29 0.837432 5e-58 rheumatoid arthritis 6_32486159 rs112062732 ENSG00000237541.3 HLA-DQA2 -255183 4.58e-13 0.608618 6e-227 rheumatoid arthritis 6_32486159 rs112062732 ENSG00000229391.7 HLA-DRB6 -73863 2.71e-27 0.836261 6e-227 rheumatoid arthritis 6_32486159 rs112062732 ENSG00000223534.1 HLA-DQB1-AS1 -174196 9.21e-06 -0.271881 6e-227 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000204301.6 NOTCH4 309300 6.24e-05 -0.164217 9e-52 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000244731.7 C4A 551343 1.39e-07 -0.246291 9e-52 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000237541.3 HLA-DQA2 -207975 5.86e-05 -0.308197 9e-52 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000198502.5 HLA-DRB5 3080 4.02e-34 -0.81045 9e-52 rheumatoid arthritis 6_32593593 rs35139284 ENSG00000237541.3 HLA-DQA2 -147749 2.05e-05 0.367334 4e-287 rheumatoid arthritis 6_32593593 rs35139284 ENSG00000229391.7 HLA-DRB6 33571 1.24e-08 0.472002 4e-287 rheumatoid arthritis 6_32593593 rs35139284 ENSG00000196126.11 HLA-DRB1 3745 3.12e-06 0.25468 4e-287 rheumatoid arthritis 6_32606394 rs615672 ENSG00000179344.16 HLA-DQB1 -61989 3.4e-08 -0.365834 8e-27 rheumatoid arthritis 6_32606394 rs615672 ENSG00000244731.7 C4A 624370 3.6e-07 -0.240588 8e-27 rheumatoid arthritis 6_32606394 rs615672 ENSG00000232629.8 HLA-DQB2 -157140 3.11e-05 0.308169 8e-27 rheumatoid arthritis 6_32606394 rs615672 ENSG00000196126.11 HLA-DRB1 16546 2.16e-06 -0.231656 8e-27 rheumatoid arthritis 6_32606394 rs615672 ENSG00000198502.5 HLA-DRB5 76107 2.83e-22 -0.683704 8e-27 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 4.46e-38 1.07026 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000179344.16 HLA-DQB1 -58780 6.16e-06 -0.370952 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000229391.7 HLA-DRB6 49581 1.66e-13 0.658096 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000232629.8 HLA-DQB2 -153931 6.14e-06 0.409055 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 4.46e-38 1.07026 2e-08 rheumatoid arthritis 6_32609603 rs660895 ENSG00000179344.16 HLA-DQB1 -58780 6.16e-06 -0.370952 2e-08 rheumatoid arthritis 6_32609603 rs660895 ENSG00000229391.7 HLA-DRB6 49581 1.66e-13 0.658096 2e-08 rheumatoid arthritis 6_32609603 rs660895 ENSG00000232629.8 HLA-DQB2 -153931 6.14e-06 0.409055 2e-08 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 4.46e-38 1.07026 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000179344.16 HLA-DQB1 -58780 6.16e-06 -0.370952 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000229391.7 HLA-DRB6 49581 1.66e-13 0.658096 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000232629.8 HLA-DQB2 -153931 6.14e-06 0.409055 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 4.46e-38 1.07026 1e-108 rheumatoid arthritis 6_32609603 rs660895 ENSG00000179344.16 HLA-DQB1 -58780 6.16e-06 -0.370952 1e-108 rheumatoid arthritis 6_32609603 rs660895 ENSG00000229391.7 HLA-DRB6 49581 1.66e-13 0.658096 1e-108 rheumatoid arthritis 6_32609603 rs660895 ENSG00000232629.8 HLA-DQB2 -153931 6.14e-06 0.409055 1e-108 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000229391.7 HLA-DRB6 54851 8.96e-26 1.00766 2e-10 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000237541.3 HLA-DQA2 -126469 7.85e-38 1.20776 2e-10 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000196126.11 HLA-DRB1 25025 4.42e-06 0.311826 2e-10 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000241106.6 HLA-DOB -202175 1.09e-06 0.439404 2e-10 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000229391.7 HLA-DRB6 54851 8.96e-26 1.00766 5e-21 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000237541.3 HLA-DQA2 -126469 7.85e-38 1.20776 5e-21 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000196126.11 HLA-DRB1 25025 4.42e-06 0.311826 5e-21 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000241106.6 HLA-DOB -202175 1.09e-06 0.439404 5e-21 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000241106.6 HLA-DOB -201468 1.09e-06 0.439404 2e-10 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000196126.11 HLA-DRB1 25732 4.42e-06 0.311826 2e-10 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000237541.3 HLA-DQA2 -125762 7.85e-38 1.20776 2e-10 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000229391.7 HLA-DRB6 55558 8.96e-26 1.00766 2e-10 rheumatoid arthritis 6_32615965 rs9271348 ENSG00000198502.5 HLA-DRB5 85678 8.29e-28 -0.873348 5e-07 rheumatoid arthritis 6_32615965 rs9271348 ENSG00000231852.6 CYP21A2 577700 5.6e-07 0.312304 5e-07 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000229391.7 HLA-DRB6 69223 3.46e-24 0.977632 3e-11 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000237541.3 HLA-DQA2 -112097 2.32e-38 1.2108 3e-11 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000241106.6 HLA-DOB -187803 3.92e-07 0.455272 3e-11 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000196126.11 HLA-DRB1 39397 4.34e-06 0.311229 3e-11 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000204338.8 CYP21A1P 690385 0.000108789 0.228616 1e-09 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000237541.3 HLA-DQA2 -45268 1.15e-06 0.386344 1e-09 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000179344.16 HLA-DQB1 27691 7.82e-06 -0.309156 1e-09 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000223534.1 HLA-DQB1-AS1 35719 4.74e-10 -0.344865 1e-09 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000229391.7 HLA-DRB6 136052 7.92e-05 0.3077 1e-09 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000204338.8 CYP21A1P 690385 0.000108789 0.228616 5e-75 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000237541.3 HLA-DQA2 -45268 1.15e-06 0.386344 5e-75 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000179344.16 HLA-DQB1 27691 7.82e-06 -0.309156 5e-75 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000223534.1 HLA-DQB1-AS1 35719 4.74e-10 -0.344865 5e-75 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000229391.7 HLA-DRB6 136052 7.92e-05 0.3077 5e-75 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000204338.8 CYP21A1P 690533 0.000108789 0.228616 4e-186 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000223534.1 HLA-DQB1-AS1 35867 4.74e-10 -0.344865 4e-186 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000229391.7 HLA-DRB6 136200 7.92e-05 0.3077 4e-186 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000179344.16 HLA-DQB1 27839 7.82e-06 -0.309156 4e-186 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000237541.3 HLA-DQA2 -45120 1.15e-06 0.386344 4e-186 rheumatoid arthritis 6_32699330 rs9275334 ENSG00000229391.7 HLA-DRB6 139308 1.75e-13 0.894347 2e-06 rheumatoid arthritis 6_32699330 rs9275334 ENSG00000237541.3 HLA-DQA2 -42012 9.03e-21 1.13037 2e-06 rheumatoid arthritis 6_32699330 rs9275334 ENSG00000241106.6 HLA-DOB -117718 6.64e-13 0.759078 2e-06 rheumatoid arthritis 6_32703326 rs13192471 ENSG00000232629.8 HLA-DQB2 -60208 1.54e-06 -0.480341 2e-58 rheumatoid arthritis 6_32703326 rs13192471 ENSG00000196735.11 HLA-DQA1 75147 0.00012739 0.288243 2e-58 rheumatoid arthritis 6_32703326 rs13192471 ENSG00000237541.3 HLA-DQA2 -38016 5.58e-05 -0.423709 2e-58 rheumatoid arthritis 6_32703326 rs13192471 ENSG00000241106.6 HLA-DOB -113722 6.89e-05 -0.353937 2e-58 rheumatoid arthritis 6_32705797 rs9275495 ENSG00000241106.6 HLA-DOB -111251 6.64e-13 0.759078 2e-06 rheumatoid arthritis 6_32705797 rs9275495 ENSG00000229391.7 HLA-DRB6 145775 1.75e-13 0.894347 2e-06 rheumatoid arthritis 6_32705797 rs9275495 ENSG00000237541.3 HLA-DQA2 -35545 9.03e-21 1.13037 2e-06 rheumatoid arthritis 6_32707693 rs12525220 ENSG00000232629.8 HLA-DQB2 -55841 4.03e-05 0.7687 2e-13 rheumatoid arthritis 6_32707693 rs12525220 ENSG00000232629.8 HLA-DQB2 -55841 4.03e-05 0.7687 3e-12 rheumatoid arthritis 6_32707693 rs12525220 ENSG00000232629.8 HLA-DQB2 -55841 4.03e-05 0.7687 7e-14 rheumatoid arthritis 6_32707746 rs9275530 ENSG00000241106.6 HLA-DOB -109302 6.64e-13 0.759078 2e-06 rheumatoid arthritis 6_32707746 rs9275530 ENSG00000237541.3 HLA-DQA2 -33596 9.03e-21 1.13037 2e-06 rheumatoid arthritis 6_32707746 rs9275530 ENSG00000229391.7 HLA-DRB6 147724 1.75e-13 0.894347 2e-06 rheumatoid arthritis 6_32707857 rs9275532 ENSG00000237541.3 HLA-DQA2 -33485 9.03e-21 1.13037 5e-06 rheumatoid arthritis 6_32707857 rs9275532 ENSG00000241106.6 HLA-DOB -109191 6.64e-13 0.759078 5e-06 rheumatoid arthritis 6_32707857 rs9275532 ENSG00000229391.7 HLA-DRB6 147835 1.75e-13 0.894347 5e-06 rheumatoid arthritis 6_32713151 rs7765379 ENSG00000232629.8 HLA-DQB2 -50383 1.13e-07 0.645279 5e-23 rheumatoid arthritis 6_32713151 rs7765379 ENSG00000179344.16 HLA-DQB1 44768 6.59e-05 -0.445362 5e-23 rheumatoid arthritis 6_32713151 rs7765379 ENSG00000237541.3 HLA-DQA2 -28191 3.76e-09 0.744838 5e-23 rheumatoid arthritis 6_32713706 rs7454108 ENSG00000229391.7 HLA-DRB6 153684 1.75e-13 0.894347 2e-06 rheumatoid arthritis 6_32713706 rs7454108 ENSG00000237541.3 HLA-DQA2 -27636 9.03e-21 1.13037 2e-06 rheumatoid arthritis 6_32713706 rs7454108 ENSG00000241106.6 HLA-DOB -103342 6.64e-13 0.759078 2e-06 rheumatoid arthritis 6_32713753 rs3957146 ENSG00000237541.3 HLA-DQA2 -27589 9.03e-21 1.13037 1e-06 rheumatoid arthritis 6_32713753 rs3957146 ENSG00000229391.7 HLA-DRB6 153731 1.75e-13 0.894347 1e-06 rheumatoid arthritis 6_32713753 rs3957146 ENSG00000241106.6 HLA-DOB -103295 6.64e-13 0.759078 1e-06 rheumatoid arthritis 6_32714242 rs3998159 ENSG00000241106.6 HLA-DOB -102806 5.45e-13 0.755069 2e-06 rheumatoid arthritis 6_32714242 rs3998159 ENSG00000229391.7 HLA-DRB6 154220 3.79e-13 0.875354 2e-06 rheumatoid arthritis 6_32714242 rs3998159 ENSG00000237541.3 HLA-DQA2 -27100 8.48e-20 1.09618 2e-06 rheumatoid arthritis 7_128932712 rs4731532 ENSG00000128604.19 IRF5 -4900 3.96e-12 0.25107 1e-07 rheumatoid arthritis 7_128933913 rs4728142 ENSG00000128604.19 IRF5 -3699 1e-16 0.311135 7e-10 rheumatoid arthritis 7_128933913 rs4728142 ENSG00000128604.19 IRF5 -3699 1e-16 0.311135 5e-12 rheumatoid arthritis 7_128936032 rs3757387 ENSG00000128604.19 IRF5 -1580 9.86e-18 0.31413 2e-19 rheumatoid arthritis 7_128936032 rs3757387 ENSG00000128604.19 IRF5 -1580 9.86e-18 0.31413 5e-09 rheumatoid arthritis 7_128939988 rs3778753 ENSG00000128604.19 IRF5 2376 3.48e-17 0.307561 4e-12 rheumatoid arthritis 7_128939988 rs3778753 ENSG00000128604.19 IRF5 2376 3.48e-17 0.307561 3e-14 rheumatoid arthritis 7_128940626 rs3807306 ENSG00000128604.19 IRF5 3014 2.26e-17 0.307171 5e-10 rheumatoid arthritis 7_128940626 rs3807306 ENSG00000128604.19 IRF5 3014 2.26e-17 0.307171 3e-07 rheumatoid arthritis 7_128940626 rs3807306 ENSG00000128604.19 IRF5 3014 2.26e-17 0.307171 7e-10 rheumatoid arthritis 7_128949579 rs10954214 ENSG00000128604.19 IRF5 11967 1.16e-07 0.204587 7e-17 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000153814.11 JAZF1 -45376 7.6e-06 -0.165591 6e-06 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000234336.6 JAZF1-AS1 -44955 1.55e-14 -0.396595 6e-06 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000153814.11 JAZF1 -45376 7.6e-06 -0.165591 3e-09 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000234336.6 JAZF1-AS1 -44955 1.55e-14 -0.396595 3e-09 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000153814.11 JAZF1 -45376 7.6e-06 -0.165591 4e-09 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000234336.6 JAZF1-AS1 -44955 1.55e-14 -0.396595 4e-09 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000153814.11 JAZF1 -45376 7.6e-06 -0.165591 2e-06 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000234336.6 JAZF1-AS1 -44955 1.55e-14 -0.396595 2e-06 rheumatoid arthritis 8_11502129 rs1600249 ENSG00000104643.9 MTMR9 217060 6.4e-05 0.168197 5e-06 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000119403.13 PHF19 -21053 6.64e-05 0.15749 3e-09 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000226752.9 CUTALP 49015 2.22e-10 -0.447494 3e-09 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000119403.13 PHF19 -21053 6.64e-05 0.15749 2e-08 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000226752.9 CUTALP 49015 2.22e-10 -0.447494 2e-08 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000119403.13 PHF19 -21053 6.64e-05 0.15749 5e-11 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000226752.9 CUTALP 49015 2.22e-10 -0.447494 5e-11 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000119403.13 PHF19 -21053 6.64e-05 0.15749 4e-09 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000226752.9 CUTALP 49015 2.22e-10 -0.447494 4e-09 rheumatoid arthritis 9_120889023 rs2072438 ENSG00000226752.9 CUTALP 64195 3.59e-13 -0.511644 3e-09 rheumatoid arthritis 9_120889023 rs2072438 ENSG00000119403.13 PHF19 -5873 7.72e-05 0.157612 3e-09 rheumatoid arthritis 9_120890620 rs881375 ENSG00000226752.9 CUTALP 65792 3.04e-12 -0.534442 4e-08 rheumatoid arthritis 9_120900340 rs10760126 ENSG00000226752.9 75512 1.36e-13 -0.521765 4e-12 rheumatoid arthritis 9_120905921 rs10435844 ENSG00000226752.9 81093 2.54e-12 -0.536538 1e-10 rheumatoid arthritis 9_120921291 rs2269060 ENSG00000226752.9 CUTALP 96463 1.57e-10 -0.450572 4e-07 rheumatoid arthritis 9_120921291 rs2269060 ENSG00000119403.13 PHF19 26395 3.73e-05 0.162511 4e-07 rheumatoid arthritis 9_120921291 rs2269060 ENSG00000226752.9 CUTALP 96463 1.57e-10 -0.450572 2e-08 rheumatoid arthritis 9_120921291 rs2269060 ENSG00000119403.13 PHF19 26395 3.73e-05 0.162511 2e-08 rheumatoid arthritis 9_120927961 rs3761847 ENSG00000119403.13 PHF19 33065 9.04e-05 0.153789 2e-07 rheumatoid arthritis 9_120927961 rs3761847 ENSG00000226752.9 CUTALP 103133 2.3e-10 -0.444617 2e-07 rheumatoid arthritis 9_120927961 rs3761847 ENSG00000119403.13 PHF19 33065 9.04e-05 0.153789 4e-14 rheumatoid arthritis 9_120927961 rs3761847 ENSG00000226752.9 CUTALP 103133 2.3e-10 -0.444617 4e-14 rheumatoid arthritis 9_120933004 rs10739580 ENSG00000226752.9 CUTALP 108176 2.66e-12 -0.530001 2e-06 rheumatoid arthritis 9_120944104 rs2900180 ENSG00000226752.9 CUTALP 119276 2.34e-12 -0.532156 6e-09 rheumatoid arthritis 9_136395373 rs4266763 ENSG00000148384.12 INPP5E -44450 6.47e-06 -0.148994 1e-13 rheumatoid arthritis 9_136395373 rs4266763 ENSG00000165689.16 ENTR1 -15196 4.14e-05 -0.124798 1e-13 rheumatoid arthritis X_153982797 rs13397 ENSG00000172534.13 HCFC1 10990 2.45e-36 0.464954 3e-12 rheumatoid arthritis X_153982797 rs13397 ENSG00000177854.7 TMEM187 10470 1.2e-24 -0.551297 3e-12 rheumatoid arthritis X_153982797 rs13397 ENSG00000172534.13 HCFC1 10990 2.45e-36 0.464954 1e-12 rheumatoid arthritis X_153982797 rs13397 ENSG00000177854.7 TMEM187 10470 1.2e-24 -0.551297 1e-12 rheumatoid arthritis X_154018741 rs1059702 ENSG00000177854.7 TMEM187 46414 1.02e-22 0.528845 5e-10 rheumatoid arthritis X_154018741 rs1059702 ENSG00000172534.13 HCFC1 46934 6.43e-32 -0.439415 5e-10 rheumatoid arthritis X_154036016 rs5987194 ENSG00000172534.13 HCFC1 64209 1.13e-30 -0.421933 5e-16 rheumatoid arthritis X_154036016 rs5987194 ENSG00000177854.7 TMEM187 63689 1.54e-21 0.503833 5e-16 rheumatoid arthritis X_154036016 rs5987194 ENSG00000172534.13 HCFC1 64209 1.13e-30 -0.421933 3e-12 rheumatoid arthritis X_154036016 rs5987194 ENSG00000177854.7 TMEM187 63689 1.54e-21 0.503833 3e-12 rheumatoid arthritis X_154036016 rs5987194 ENSG00000172534.13 HCFC1 64209 1.13e-30 -0.421933 4e-22 rheumatoid arthritis X_154036016 rs5987194 ENSG00000177854.7 TMEM187 63689 1.54e-21 0.503833 4e-22