DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
rheumatoid arthritis	1_157699488	rs3761959	ENSG00000160856.20	FCRL3	-1369	6.89e-15	0.278551	1e-08
rheumatoid arthritis	1_157699488	rs3761959	ENSG00000160856.20	FCRL3	-1369	6.89e-15	0.278551	1e-10
rheumatoid arthritis	1_157705207	rs2317230	ENSG00000160856.20	FCRL3	4350	6.9e-13	0.264581	2e-07
rheumatoid arthritis	1_157705207	rs2317230	ENSG00000160856.20	FCRL3	4350	6.9e-13	0.264581	1e-08
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	5.42e-07	-0.404427	5e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	3.79e-09	-0.43309	5e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	5.42e-07	-0.404427	1e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	3.79e-09	-0.43309	1e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	5.42e-07	-0.404427	1e-06
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	3.79e-09	-0.43309	1e-06
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	5.42e-07	-0.404427	2e-06
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	3.79e-09	-0.43309	2e-06
rheumatoid arthritis	1_161505960	rs10494360	ENSG00000225217.1	HSPA7	-100331	1.42e-08	-0.476607	3e-07
rheumatoid arthritis	1_161505960	rs10494360	ENSG00000244682.7	FCGR2C	-75379	3.64e-11	-0.50583	3e-07
rheumatoid arthritis	1_17087404	rs761426	ENSG00000117115.12	PADI2	-32031	1.95e-06	-0.225273	2e-10
rheumatoid arthritis	1_17087404	rs761426	ENSG00000058453.16	CROCC	165454	1.41e-07	0.210912	2e-10
rheumatoid arthritis	1_17087404	rs761426	ENSG00000186715.10	MST1L	317167	0.000156408	0.213974	2e-10
rheumatoid arthritis	1_17087404	rs761426	ENSG00000117115.12	PADI2	-32031	1.95e-06	-0.225273	1e-06
rheumatoid arthritis	1_17087404	rs761426	ENSG00000058453.16	CROCC	165454	1.41e-07	0.210912	1e-06
rheumatoid arthritis	1_17087404	rs761426	ENSG00000186715.10	MST1L	317167	0.000156408	0.213974	1e-06
rheumatoid arthritis	1_17103279	rs2235909	ENSG00000117115.12	PADI2	-16156	9.24e-07	-0.214024	2e-09
rheumatoid arthritis	1_17103279	rs2235909	ENSG00000058453.16	CROCC	181329	5.82e-05	0.149533	2e-09
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.13e-07	0.251616	8e-13
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.13e-07	0.251616	1e-18
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.13e-07	0.251616	5e-21
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.13e-07	0.251616	4e-26
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.13e-07	0.251616	6e-19
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.13e-07	0.251616	6e-09
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.13e-07	0.251616	6e-09
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.13e-07	0.251616	9e-13
rheumatoid arthritis	1_17347613	rs2240339	ENSG00000159339.13	PADI4	39418	2.37e-05	0.215996	3e-10
rheumatoid arthritis	1_17347613	rs2240339	ENSG00000159339.13	PADI4	39418	2.37e-05	0.215996	1e-10
rheumatoid arthritis	1_17348042	rs2240335	ENSG00000159339.13	PADI4	39847	1.29e-05	0.223144	2e-08
rheumatoid arthritis	1_17348042	rs2240335	ENSG00000159339.13	PADI4	39847	1.29e-05	0.223144	2e-08
rheumatoid arthritis	1_200905600	rs55838263	ENSG00000163362.10	INAVA	14552	1.54e-17	0.234208	4e-15
rheumatoid arthritis	1_2552522	rs2258734	ENSG00000157870.14	PRXL2B	-33969	3.49e-08	0.185194	6e-14
rheumatoid arthritis	1_2552522	rs2258734	ENSG00000215912.12	TTC34	-249195	2.05e-07	0.219187	6e-14
rheumatoid arthritis	1_2569783	rs10797431	ENSG00000215912.12	TTC34	-231934	1.45e-06	0.200128	1e-08
rheumatoid arthritis	1_2569783	rs10797431	ENSG00000157870.14	PRXL2B	-16708	8.89e-05	0.130415	1e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000157870.14	PRXL2B	10203	8.43e-09	-0.193679	7e-12
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000215912.12	TTC34	-205023	1.74e-08	-0.237877	7e-12
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000157870.14	PRXL2B	10203	8.43e-09	-0.193679	7e-10
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000215912.12	TTC34	-205023	1.74e-08	-0.237877	7e-10
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000157870.14	PRXL2B	10203	8.43e-09	-0.193679	4e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000215912.12	TTC34	-205023	1.74e-08	-0.237877	4e-08
rheumatoid arthritis	1_2603539	rs6664969	ENSG00000215912.12	TTC34	-198178	2.44e-08	0.23254	1e-08
rheumatoid arthritis	1_2603539	rs6664969	ENSG00000157870.14	PRXL2B	17048	8.2e-08	0.178526	1e-08
rheumatoid arthritis	1_2608357	rs4073285	ENSG00000215912.12	TTC34	-193360	8.29e-09	0.2415	2e-13
rheumatoid arthritis	1_2608357	rs4073285	ENSG00000157870.14	PRXL2B	21866	2.46e-06	0.158472	2e-13
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	5.53e-09	0.242611	1e-07
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157870.14	PRXL2B	35694	3.06e-07	0.170658	1e-07
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	5.53e-09	0.242611	2e-08
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157870.14	PRXL2B	35694	3.06e-07	0.170658	2e-08
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	5.53e-09	0.242611	4e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157870.14	PRXL2B	35694	3.06e-07	0.170658	4e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	5.53e-09	0.242611	1e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157870.14	PRXL2B	35694	3.06e-07	0.170658	1e-06
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	1.94e-32	0.518712	2e-11
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	1.94e-32	0.518712	6e-12
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	1.94e-32	0.518712	3e-12
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	1.94e-32	0.518712	5e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	1.94e-32	0.518712	6e-09
rheumatoid arthritis	1_67215986	rs7517847	ENSG00000081985.10	IL12RB2	-91378	0.000108095	0.150054	5e-43
rheumatoid arthritis	10_62198353	rs3125734	ENSG00000138311.15	ZNF365	-175839	1.31e-06	0.126485	5e-09
rheumatoid arthritis	10_62198353	rs3125734	ENSG00000182010.10	RTKN2	-70354	0.000107206	-0.114762	5e-09
rheumatoid arthritis	10_62198353	rs3125734	ENSG00000234756.1	LINC02621	-91168	2.06e-06	0.159574	5e-09
rheumatoid arthritis	10_62277122	rs6479800	ENSG00000182010.10	RTKN2	8415	1.59e-11	0.210181	4e-08
rheumatoid arthritis	10_62277122	rs6479800	ENSG00000182010.10	RTKN2	8415	1.59e-11	0.210181	4e-06
rheumatoid arthritis	10_62277122	rs6479800	ENSG00000182010.10	RTKN2	8415	1.59e-11	0.210181	7e-07
rheumatoid arthritis	10_62277122	rs6479800	ENSG00000182010.10	RTKN2	8415	1.59e-11	0.210181	8e-08
rheumatoid arthritis	10_62303318	rs56139217	ENSG00000182010.10	RTKN2	34611	4.01e-07	0.19347	1e-08
rheumatoid arthritis	10_79947217	rs726288	ENSG00000230091.6	TMEM254-AS1	-131695	1.6e-05	0.706447	9e-09
rheumatoid arthritis	10_79947217	rs726288	ENSG00000230091.6	TMEM254-AS1	-131695	1.6e-05	0.706447	1e-06
rheumatoid arthritis	10_79947217	rs726288	ENSG00000230091.6	TMEM254-AS1	-131695	1.6e-05	0.706447	8e-08
rheumatoid arthritis	10_80462422	rs7100689	ENSG00000122378.13	PRXL2A	54593	8.82e-25	-0.400755	7e-08
rheumatoid arthritis	11_118741072	rs10892279	ENSG00000118094.11	TREH	61399	1.57e-08	-0.226147	3e-08
rheumatoid arthritis	11_118741072	rs10892279	ENSG00000118094.11	TREH	61399	1.57e-08	-0.226147	1e-10
rheumatoid arthritis	11_118806377	rs11217037	ENSG00000255121.2	CENATAC-DT	-191627	6.61e-05	0.196308	1e-12
rheumatoid arthritis	11_118806377	rs11217037	ENSG00000118094.11	TREH	126704	9.65e-09	-0.24498	1e-12
rheumatoid arthritis	11_118809939	rs11217040	ENSG00000118094.11	TREH	130266	2.24e-07	-0.217457	2e-11
rheumatoid arthritis	11_118809939	rs11217040	ENSG00000255121.2	CENATAC-DT	-188065	3.61e-05	0.199039	2e-11
rheumatoid arthritis	11_118858682	rs10790268	ENSG00000118094.11	TREH	179009	3.46e-06	0.194925	1e-13
rheumatoid arthritis	11_118858682	rs10790268	ENSG00000118094.11	TREH	179009	3.46e-06	0.194925	1e-17
rheumatoid arthritis	11_118858682	rs10790268	ENSG00000118094.11	TREH	179009	3.46e-06	0.194925	3e-15
rheumatoid arthritis	11_118858682	rs10790268	ENSG00000118094.11	TREH	179009	3.46e-06	0.194925	1e-15
rheumatoid arthritis	11_118871133	rs4938573	ENSG00000118094.11	TREH	191460	6.18e-07	0.20519	5e-07
rheumatoid arthritis	11_609888	rs12421158	ENSG00000069696.6	DRD4	-27405	1.18e-10	-0.228983	4e-06
rheumatoid arthritis	11_609888	rs12421158	ENSG00000177042.14	TMEM80	-85645	2.77e-06	0.162224	4e-06
rheumatoid arthritis	11_609888	rs12421158	ENSG00000070047.11	PHRF1	33402	1.27e-10	-0.200767	4e-06
rheumatoid arthritis	11_609888	rs12421158	ENSG00000174775.16	HRAS	72601	0.000114675	-0.0869267	4e-06
rheumatoid arthritis	11_61138978	rs508970	ENSG00000167987.10	VPS37C	-22639	6.01e-05	0.0950176	4e-06
rheumatoid arthritis	11_61138978	rs508970	ENSG00000167987.10	VPS37C	-22639	6.01e-05	0.0950176	3e-06
rheumatoid arthritis	11_61822009	rs28456	ENSG00000134824.13	FADS2	5753	8.8e-05	0.188563	4e-06
rheumatoid arthritis	11_61822009	rs28456	ENSG00000124920.13	MYRF	69360	8.77e-06	-0.194607	4e-06
rheumatoid arthritis	11_61822009	rs28456	ENSG00000149485.18	FADS1	-7309	6.22e-36	-0.457743	4e-06
rheumatoid arthritis	11_61822009	rs28456	ENSG00000134780.9	DAGLA	141576	8.91e-07	-0.142569	4e-06
rheumatoid arthritis	11_61828092	rs968567	ENSG00000149485.18	FADS1	-1226	5.1e-11	-0.339275	2e-08
rheumatoid arthritis	11_61828092	rs968567	ENSG00000134824.13	FADS2	11836	1.03e-21	0.583728	2e-08
rheumatoid arthritis	11_61828092	rs968567	ENSG00000149485.18	FADS1	-1226	5.1e-11	-0.339275	7e-07
rheumatoid arthritis	11_61828092	rs968567	ENSG00000134824.13	FADS2	11836	1.03e-21	0.583728	7e-07
rheumatoid arthritis	11_633689	rs7929541	ENSG00000177030.16	DEAF1	-72905	6.9e-05	0.111305	2e-10
rheumatoid arthritis	11_633689	rs7929541	ENSG00000177042.14	TMEM80	-61844	1.14e-10	0.218807	2e-10
rheumatoid arthritis	11_633689	rs7929541	ENSG00000070047.11	PHRF1	57203	1.25e-08	-0.177208	2e-10
rheumatoid arthritis	11_633689	rs7929541	ENSG00000069696.6	DRD4	-3604	4.99e-12	-0.242607	2e-10
rheumatoid arthritis	11_64275525	rs660442	ENSG00000149782.11	PLCB3	24002	9.9e-08	0.206115	1e-09
rheumatoid arthritis	11_64275525	rs660442	ENSG00000168071.21	CCDC88B	-64698	5.15e-13	-0.390575	1e-09
rheumatoid arthritis	11_64275525	rs660442	ENSG00000162302.12	RPS6KA4	-83623	5.53e-05	-0.110154	1e-09
rheumatoid arthritis	11_72662452	rs3781913	ENSG00000186635.14	ARAP1	-89951	2.95e-09	-0.22634	6e-10
rheumatoid arthritis	11_9731194	rs9943599	ENSG00000133789.14	SWAP70	67117	1.6e-05	-0.116732	3e-10
rheumatoid arthritis	11_9751970	rs360136	ENSG00000133789.14	SWAP70	87893	9.96e-05	-0.106001	5e-10
rheumatoid arthritis	12_111395984	rs10774624	ENSG00000111275.12	ALDH2	-370903	5.02e-09	-0.215292	8e-08
rheumatoid arthritis	12_111395984	rs10774624	ENSG00000185847.7	LINC01405	459399	2.48e-06	-0.230932	8e-08
rheumatoid arthritis	12_111395984	rs10774624	ENSG00000111275.12	ALDH2	-370903	5.02e-09	-0.215292	2e-07
rheumatoid arthritis	12_111395984	rs10774624	ENSG00000185847.7	LINC01405	459399	2.48e-06	-0.230932	2e-07
rheumatoid arthritis	12_111395984	rs10774624	ENSG00000111275.12	ALDH2	-370903	5.02e-09	-0.215292	7e-09
rheumatoid arthritis	12_111395984	rs10774624	ENSG00000185847.7	LINC01405	459399	2.48e-06	-0.230932	7e-09
rheumatoid arthritis	12_111446804	rs3184504	ENSG00000185847.7	LINC01405	510219	6.77e-07	-0.244904	6e-06
rheumatoid arthritis	12_111446804	rs3184504	ENSG00000111275.12	ALDH2	-320083	4.81e-11	-0.242584	6e-06
rheumatoid arthritis	12_112172910	rs11066188	ENSG00000111275.12	ALDH2	406023	1.22e-09	0.229192	9e-10
rheumatoid arthritis	12_112433568	rs11066301	ENSG00000111275.12	ALDH2	666681	2.54e-08	0.208808	4e-08
rheumatoid arthritis	12_48021974	rs4760609	ENSG00000167528.12	ZNF641	-329440	7.52e-06	0.149275	3e-12
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	1.52e-08	-0.180838	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.33e-99	0.95057	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000123411.14	IKZF4	-6489	7.85e-07	0.217199	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	1.52e-08	-0.180838	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.33e-99	0.95057	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000123411.14	IKZF4	-6489	7.85e-07	0.217199	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	1.52e-08	-0.180838	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.33e-99	0.95057	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000123411.14	IKZF4	-6489	7.85e-07	0.217199	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	1.52e-08	-0.180838	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.33e-99	0.95057	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000123411.14	IKZF4	-6489	7.85e-07	0.217199	1e-09
rheumatoid arthritis	12_57574932	rs1678542	ENSG00000123427.16	EEF1AKMT3	-196674	8.63e-06	0.17777	1e-07
rheumatoid arthritis	12_57574932	rs1678542	ENSG00000166896.7	ATP23	-366609	8e-08	-0.259331	1e-07
rheumatoid arthritis	12_57574932	rs1678542	ENSG00000123427.16	EEF1AKMT3	-196674	8.63e-06	0.17777	9e-08
rheumatoid arthritis	12_57574932	rs1678542	ENSG00000166896.7	ATP23	-366609	8e-08	-0.259331	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000135506.15	OS9	20314	7.19e-18	0.168709	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	1.94e-14	-0.269787	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	1.45e-06	0.113873	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000166896.7	ATP23	-227272	0.000144666	0.167014	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000135506.15	OS9	20314	7.19e-18	0.168709	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	1.94e-14	-0.269787	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	1.45e-06	0.113873	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000166896.7	ATP23	-227272	0.000144666	0.167014	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000135506.15	OS9	20314	7.19e-18	0.168709	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	1.94e-14	-0.269787	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	1.45e-06	0.113873	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000166896.7	ATP23	-227272	0.000144666	0.167014	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000135506.15	OS9	20314	7.19e-18	0.168709	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	1.94e-14	-0.269787	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	1.45e-06	0.113873	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000166896.7	ATP23	-227272	0.000144666	0.167014	9e-08
rheumatoid arthritis	14_104919812	rs2841269	ENSG00000140104.13	CLBA1	-65963	4.75e-08	0.202832	2e-16
rheumatoid arthritis	14_104924668	rs2841277	ENSG00000140104.13	CLBA1	-61107	3.3e-10	0.238096	2e-14
rheumatoid arthritis	15_38535939	rs8043085	ENSG00000172575.11	RASGRP1	-29636	3.22e-31	0.375492	2e-08
rheumatoid arthritis	15_38535939	rs8043085	ENSG00000172575.11	RASGRP1	-29636	3.22e-31	0.375492	5e-11
rheumatoid arthritis	15_38535939	rs8043085	ENSG00000172575.11	RASGRP1	-29636	3.22e-31	0.375492	2e-09
rheumatoid arthritis	15_38541832	rs8032939	ENSG00000172575.11	RASGRP1	-23743	4.38e-35	0.40032	3e-14
rheumatoid arthritis	15_38541832	rs8032939	ENSG00000172575.11	RASGRP1	-23743	4.38e-35	0.40032	2e-18
rheumatoid arthritis	15_38541832	rs8032939	ENSG00000172575.11	RASGRP1	-23743	4.38e-35	0.40032	5e-24
rheumatoid arthritis	15_38541832	rs8032939	ENSG00000172575.11	RASGRP1	-23743	4.38e-35	0.40032	2e-12
rheumatoid arthritis	15_38541832	rs8032939	ENSG00000172575.11	RASGRP1	-23743	4.38e-35	0.40032	2e-17
rheumatoid arthritis	15_38541832	rs8032939	ENSG00000172575.11	RASGRP1	-23743	4.38e-35	0.40032	9e-06
rheumatoid arthritis	15_38541832	rs8032939	ENSG00000172575.11	RASGRP1	-23743	4.38e-35	0.40032	1e-09
rheumatoid arthritis	15_38541832	rs8032939	ENSG00000172575.11	RASGRP1	-23743	4.38e-35	0.40032	3e-16
rheumatoid arthritis	15_90350436	rs6496667	ENSG00000196391.10	ZNF774	-1809	3.11e-08	-0.200581	1e-06
rheumatoid arthritis	15_90350436	rs6496667	ENSG00000140575.12	IQGAP1	-37782	7.11e-19	0.185933	1e-06
rheumatoid arthritis	15_90483245	rs8040585	ENSG00000140575.12	IQGAP1	95027	1.47e-30	0.203074	2e-08
rheumatoid arthritis	16_1491460	rs2745106	ENSG00000100726.14	TELO2	-1884	4.51e-05	-0.185313	2e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000103510.19	KAT8	-500459	4.88e-15	0.290182	3e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000196118.11	CFAP119	-147415	3.38e-05	-0.230837	3e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000099365.10	STX1B	-395366	1.3e-06	0.175769	3e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000099377.13	HSD3B7	-372976	2.41e-16	0.310681	3e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000156858.11	PRR14	-35434	1.6e-05	-0.104084	3e-08
rheumatoid arthritis	16_50722970	rs2076756	ENSG00000261644.2	CYLD-AS1	-19789	4.84e-06	0.226893	5e-13
rheumatoid arthritis	16_50722970	rs2076756	ENSG00000083799.17	CYLD	-19080	8.32e-08	0.179065	5e-13
rheumatoid arthritis	16_50722970	rs2076756	ENSG00000167207.11	NOD2	29367	1.66e-13	0.288957	5e-13
rheumatoid arthritis	17_39583908	rs1877030	ENSG00000131771.13	PPP1R1B	-42832	6.51e-15	0.388448	1e-08
rheumatoid arthritis	17_39583908	rs1877030	ENSG00000131771.13	PPP1R1B	-42832	6.51e-15	0.388448	2e-08
rheumatoid arthritis	17_39877024	rs1054609	ENSG00000172057.9	ORMDL3	-50577	2.45e-05	-0.108177	6e-07
rheumatoid arthritis	17_39884510	rs2872507	ENSG00000172057.9	ORMDL3	-43091	4.13e-05	-0.105284	9e-07
rheumatoid arthritis	17_39884510	rs2872507	ENSG00000172057.9	ORMDL3	-43091	4.13e-05	-0.105284	3e-09
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000172057.9	ORMDL3	-40205	1.01e-05	-0.117046	7e-07
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000172057.9	ORMDL3	-40205	1.01e-05	-0.117046	4e-07
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000172057.9	ORMDL3	-40205	1.01e-05	-0.117046	1e-10
rheumatoid arthritis	17_39905943	rs2305480	ENSG00000172057.9	ORMDL3	-21658	4.24e-06	-0.122863	4e-09
rheumatoid arthritis	17_5369285	rs72634030	ENSG00000005100.12	DHX33	-99775	6e-05	-0.16325	2e-09
rheumatoid arthritis	17_5369285	rs72634030	ENSG00000108559.11	NUP88	-50355	2.52e-07	-0.201139	2e-09
rheumatoid arthritis	17_5369285	rs72634030	ENSG00000029725.16	RABEP1	87020	6.71e-05	0.221901	2e-09
rheumatoid arthritis	17_5369285	rs72634030	ENSG00000005100.12	DHX33	-99775	6e-05	-0.16325	7e-08
rheumatoid arthritis	17_5369285	rs72634030	ENSG00000108559.11	NUP88	-50355	2.52e-07	-0.201139	7e-08
rheumatoid arthritis	17_5369285	rs72634030	ENSG00000029725.16	RABEP1	87020	6.71e-05	0.221901	7e-08
rheumatoid arthritis	17_78232490	rs11868709	ENSG00000089685.14	BIRC5	18304	6.35e-12	-0.110211	7e-11
rheumatoid arthritis	18_12797695	rs2847297	ENSG00000260302.1	LINC01882	21772	4.09e-08	0.324833	2e-08
rheumatoid arthritis	18_12797695	rs2847297	ENSG00000260302.1	LINC01882	21772	4.09e-08	0.324833	3e-08
rheumatoid arthritis	18_12797695	rs2847297	ENSG00000260302.1	LINC01882	21772	4.09e-08	0.324833	3e-14
rheumatoid arthritis	19_10359299	rs12720356	ENSG00000220201.7	ZGLP1	49419	2.43e-05	-0.150515	4e-09
rheumatoid arthritis	2_181246479	rs16867384	ENSG00000170035.15	UBE2E3	279231	8.3e-05	-0.143157	6e-09
rheumatoid arthritis	2_190700031	rs744600	ENSG00000198130.15	HIBCH	379986	2.38e-05	0.123877	7e-11
rheumatoid arthritis	2_201196097	rs3731714	ENSG00000240344.8	PPIL3	306794	1.48e-07	0.30307	7e-09
rheumatoid arthritis	2_201196097	rs3731714	ENSG00000155749.12	FLACC1	-161301	1.94e-05	-0.271099	7e-09
rheumatoid arthritis	2_201196097	rs3731714	ENSG00000003400.14	CASP10	13216	2.85e-31	-0.595994	7e-09
rheumatoid arthritis	2_201196097	rs3731714	ENSG00000064012.21	CASP8	-37346	3.99e-10	0.220637	7e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000003402.19	CFLAR	173570	0.000115543	0.167183	3e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	3.43e-18	-0.657748	3e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000003402.19	CFLAR	173570	0.000115543	0.167183	5e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	3.43e-18	-0.657748	5e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000003402.19	CFLAR	173570	0.000115543	0.167183	3e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	3.43e-18	-0.657748	3e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000003402.19	CFLAR	173570	0.000115543	0.167183	2e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	3.43e-18	-0.657748	2e-09
rheumatoid arthritis	2_233275771	rs3792109	ENSG00000085978.21	ATG16L1	65720	1.79e-28	0.48723	2e-16
rheumatoid arthritis	2_60841032	rs1432296	ENSG00000162927.13	PUS10	-177129	8.13e-11	0.362239	8e-10
rheumatoid arthritis	2_60841032	rs1432296	ENSG00000237651.6	C2orf74	-304036	7.59e-05	-0.337133	8e-10
rheumatoid arthritis	2_60877850	rs10203477	ENSG00000173209.22	AHSA2P	-299568	1.67e-05	-0.101524	4e-08
rheumatoid arthritis	2_60877850	rs10203477	ENSG00000237651.6	C2orf74	-267218	4.75e-06	0.26872	4e-08
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162924.13	REL	16194	3.43e-05	-0.103632	5e-14
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162927.13	PUS10	-120446	3.1e-05	0.172335	5e-14
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162924.13	REL	16194	3.43e-05	-0.103632	2e-15
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162927.13	PUS10	-120446	3.1e-05	0.172335	2e-15
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162924.13	REL	16194	3.43e-05	-0.103632	3e-08
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162927.13	PUS10	-120446	3.1e-05	0.172335	3e-08
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162924.13	REL	16194	3.43e-05	-0.103632	4e-06
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162927.13	PUS10	-120446	3.1e-05	0.172335	4e-06
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162924.13	REL	16194	3.43e-05	-0.103632	4e-16
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162927.13	PUS10	-120446	3.1e-05	0.172335	4e-16
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162924.13	REL	16194	3.43e-05	-0.103632	4e-13
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162927.13	PUS10	-120446	3.1e-05	0.172335	4e-13
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162924.13	REL	16194	3.43e-05	-0.103632	2e-13
rheumatoid arthritis	2_60897715	rs34695944	ENSG00000162927.13	PUS10	-120446	3.1e-05	0.172335	2e-13
rheumatoid arthritis	2_60908994	rs13031237	ENSG00000162924.13	REL	27473	4.82e-05	-0.102671	8e-07
rheumatoid arthritis	2_60908994	rs13031237	ENSG00000162927.13	PUS10	-109167	2.14e-05	0.177413	8e-07
rheumatoid arthritis	2_60908994	rs13031237	ENSG00000162924.13	REL	27473	4.82e-05	-0.102671	1e-09
rheumatoid arthritis	2_60908994	rs13031237	ENSG00000162927.13	PUS10	-109167	2.14e-05	0.177413	1e-09
rheumatoid arthritis	2_60908994	rs13031237	ENSG00000162924.13	REL	27473	4.82e-05	-0.102671	1e-11
rheumatoid arthritis	2_60908994	rs13031237	ENSG00000162927.13	PUS10	-109167	2.14e-05	0.177413	1e-11
rheumatoid arthritis	2_60937196	rs13017599	ENSG00000162924.13	REL	55675	6.68e-05	-0.100045	2e-12
rheumatoid arthritis	2_60937196	rs13017599	ENSG00000162927.13	PUS10	-80965	3.39e-05	0.171893	2e-12
rheumatoid arthritis	20_46105671	rs6032662	ENSG00000101017.13	CD40	-12601	1.51e-08	0.18524	1e-09
rheumatoid arthritis	20_46118343	rs1883832	ENSG00000101017.13	CD40	71	1.55e-08	0.187521	1e-16
rheumatoid arthritis	20_46118343	rs1883832	ENSG00000101017.13	CD40	71	1.55e-08	0.187521	9e-15
rheumatoid arthritis	20_46118343	rs1883832	ENSG00000101017.13	CD40	71	1.55e-08	0.187521	2e-13
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	1.19e-07	0.17227	8e-09
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	1.19e-07	0.17227	9e-11
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	1.19e-07	0.17227	3e-09
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	1.19e-07	0.17227	2e-07
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	1.84e-05	0.130839	3e-14
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	1.84e-05	0.130839	1e-16
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	1.84e-05	0.130839	4e-18
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	1.84e-05	0.130839	4e-14
rheumatoid arthritis	20_63852655	rs6011186	ENSG00000198276.15	UCKL1	-98471	6.88e-06	-0.249472	3e-10
rheumatoid arthritis	21_33391982	rs73194058	ENSG00000142188.16	TMEM50B	-88029	1.25e-07	-0.293839	3e-08
rheumatoid arthritis	21_33391982	rs73194058	ENSG00000142188.16	TMEM50B	-88029	1.25e-07	-0.293839	1e-06
rheumatoid arthritis	21_33391982	rs73194058	ENSG00000142188.16	TMEM50B	-88029	1.25e-07	-0.293839	7e-08
rheumatoid arthritis	21_33391982	rs73194058	ENSG00000142188.16	TMEM50B	-88029	1.25e-07	-0.293839	8e-07
rheumatoid arthritis	21_34539301	rs2834512	ENSG00000159200.17	RCAN1	-75841	3.72e-07	0.228244	3e-08
rheumatoid arthritis	21_34539301	rs2834512	ENSG00000159200.17	RCAN1	-75841	3.72e-07	0.228244	4e-06
rheumatoid arthritis	21_34539301	rs2834512	ENSG00000159200.17	RCAN1	-75841	3.72e-07	0.228244	4e-07
rheumatoid arthritis	21_34555942	rs147868091	ENSG00000159200.17	RCAN1	-59200	8.22e-08	0.252804	3e-07
rheumatoid arthritis	21_34555942	rs147868091	ENSG00000159200.17	RCAN1	-59200	8.22e-08	0.252804	7e-07
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.27e-19	0.304064	1e-08
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.27e-19	0.304064	7e-12
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.27e-19	0.304064	6e-12
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.27e-19	0.304064	2e-13
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.27e-19	0.304064	8e-11
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.27e-19	0.304064	8e-11
rheumatoid arthritis	22_21561877	rs5754100	ENSG00000161180.10	CCDC116	-70839	6.23e-15	-0.523402	9e-09
rheumatoid arthritis	22_21561877	rs5754100	ENSG00000185651.14	UBE2L3	-5670	1.72e-08	0.174878	9e-09
rheumatoid arthritis	22_21562072	rs5754104	ENSG00000185651.14	UBE2L3	-5475	1.53e-08	0.17867	1e-10
rheumatoid arthritis	22_21562072	rs5754104	ENSG00000161180.10	CCDC116	-70644	1.01e-14	-0.528986	1e-10
rheumatoid arthritis	22_21602364	rs2283790	ENSG00000161180.10	CCDC116	-30352	7.53e-15	-0.510644	2e-11
rheumatoid arthritis	22_21602364	rs2283790	ENSG00000185651.14	UBE2L3	34817	1.01e-09	0.184791	2e-11
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.64e-14	-0.505245	2e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000185651.14	UBE2L3	57260	2.66e-09	0.180483	2e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000100023.18	PPIL2	-41202	1.83e-05	0.158787	2e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.64e-14	-0.505245	6e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000185651.14	UBE2L3	57260	2.66e-09	0.180483	6e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000100023.18	PPIL2	-41202	1.83e-05	0.158787	6e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.64e-14	-0.505245	1e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000185651.14	UBE2L3	57260	2.66e-09	0.180483	1e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000100023.18	PPIL2	-41202	1.83e-05	0.158787	1e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.64e-14	-0.505245	2e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000185651.14	UBE2L3	57260	2.66e-09	0.180483	2e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000100023.18	PPIL2	-41202	1.83e-05	0.158787	2e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.64e-14	-0.505245	4e-06
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000185651.14	UBE2L3	57260	2.66e-09	0.180483	4e-06
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000100023.18	PPIL2	-41202	1.83e-05	0.158787	4e-06
rheumatoid arthritis	22_21625000	rs4821124	ENSG00000161180.10	CCDC116	-7716	2.4e-14	-0.510209	2e-11
rheumatoid arthritis	22_21625000	rs4821124	ENSG00000185651.14	UBE2L3	57453	4.06e-09	0.181293	2e-11
rheumatoid arthritis	22_21630805	rs5754467	ENSG00000161180.10	CCDC116	-1911	1.4e-12	-0.464084	1e-13
rheumatoid arthritis	22_21630805	rs5754467	ENSG00000185651.14	UBE2L3	63258	7.88e-10	0.18437	1e-13
rheumatoid arthritis	22_21642781	rs13054355	ENSG00000100023.18	PPIL2	-23228	6.55e-05	0.159292	6e-12
rheumatoid arthritis	22_30174033	rs1003342	ENSG00000184117.11	NIPSNAP1	592696	4.52e-07	0.147687	6e-10
rheumatoid arthritis	22_30174033	rs1003342	ENSG00000100330.15	MTMR3	290878	2.56e-06	0.131546	6e-10
rheumatoid arthritis	22_39353976	rs5757628	ENSG00000100321.14	SYNGR1	4051	3.69e-08	0.134043	8e-10
rheumatoid arthritis	22_39360645	rs2049985	ENSG00000100321.14	SYNGR1	10720	4.95e-08	0.134179	4e-09
rheumatoid arthritis	3_46232768	rs67676925	ENSG00000163823.3	CCR1	24372	1.77e-08	0.360195	2e-11
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000145020.15	AMT	237273	1.61e-11	0.153466	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000004534.14	RBM6	-279981	1.07e-22	0.291117	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000233276.3	GPX1	301426	0.000260085	0.134808	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000182179.12	UBA7	-153920	9.11e-12	0.170549	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000185614.4	INKA1	-143228	1.31e-15	-0.250519	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000145029.13	NICN1	230700	2.52e-09	0.170169	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000178252.17	WDR6	652871	2.98e-08	0.252089	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000068745.14	IP6K2	919673	0.000176237	-0.102997	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000164068.15	RNF123	-29476	0.000166752	-0.104288	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000185909.14	KLHDC8B	488415	0.000381168	-0.123249	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000173402.11	DAG1	191323	2.4e-06	0.122106	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000164062.12	APEH	-13976	2.75e-17	0.216456	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000173531.15	MST1	-29472	4.57e-14	0.197344	6e-06
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000178252.17	WDR6	667709	6.78e-09	0.264965	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000185909.14	KLHDC8B	503253	0.000198425	-0.129857	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000145029.13	NICN1	245538	2.83e-09	0.170779	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000068745.14	IP6K2	934511	0.000668449	-0.094186	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000164068.15	RNF123	-14638	0.000101898	-0.108311	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000233276.3	GPX1	316264	0.000131312	0.14199	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000182179.12	UBA7	-139082	1.86e-12	0.17704	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000004534.14	RBM6	-265143	1.45e-21	0.285914	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000164062.12	APEH	862	5.52e-17	0.215973	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000173531.15	MST1	-14634	1.37e-14	0.202481	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000173402.11	DAG1	206161	2.19e-06	0.123403	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000185614.4	INKA1	-128390	1.93e-15	-0.250808	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000145020.15	AMT	252111	2.28e-11	0.153398	5e-07
rheumatoid arthritis	3_58197909	rs35677470	ENSG00000163684.11	RPP14	-108338	2.68e-05	-0.357146	2e-08
rheumatoid arthritis	3_58197909	rs35677470	ENSG00000163684.11	RPP14	-108338	2.68e-05	-0.357146	5e-09
rheumatoid arthritis	3_58197909	rs35677470	ENSG00000163684.11	RPP14	-108338	2.68e-05	-0.357146	2e-07
rheumatoid arthritis	3_58197909	rs35677470	ENSG00000163684.11	RPP14	-108338	2.68e-05	-0.357146	1e-06
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000168291.12	PDHB	-116649	7.06e-05	-0.18898	1e-08
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000163684.11	RPP14	10961	9.4e-06	-0.356023	1e-08
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000168291.12	PDHB	-116649	7.06e-05	-0.18898	5e-08
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000163684.11	RPP14	10961	9.4e-06	-0.356023	5e-08
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000168291.12	PDHB	-116649	7.06e-05	-0.18898	5e-08
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000163684.11	RPP14	10961	9.4e-06	-0.356023	5e-08
rheumatoid arthritis	4_25415622	rs3816587	ENSG00000053900.10	ANAPC4	38409	1.14e-27	-0.306494	9e-06
rheumatoid arthritis	4_48218822	rs2664035	ENSG00000074966.10	TXK	84566	0.000172778	-0.140778	2e-06
rheumatoid arthritis	4_48218822	rs2664035	ENSG00000074966.10	TXK	84566	0.000172778	-0.140778	3e-08
rheumatoid arthritis	4_48218822	rs2664035	ENSG00000074966.10	TXK	84566	0.000172778	-0.140778	4e-06
rheumatoid arthritis	4_48218822	rs2664035	ENSG00000074966.10	TXK	84566	0.000172778	-0.140778	1e-07
rheumatoid arthritis	4_78581818	rs10028001	ENSG00000138772.12	ANXA3	30299	1.21e-05	0.111894	7e-06
rheumatoid arthritis	4_78592061	rs2867461	ENSG00000138772.12	ANXA3	40542	3.4e-07	0.126148	1e-12
rheumatoid arthritis	4_971932	rs13101828	ENSG00000127415.12	IDUA	-15065	2.18e-08	0.12929	1e-08
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145214.13	DGKQ	-14963	1.89e-39	0.428196	1e-08
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145217.13	SLC26A1	-21508	7.09e-34	-0.503365	1e-08
rheumatoid arthritis	5_10704685	rs2918392	ENSG00000112977.15	DAP	-56587	5.23e-16	-0.314087	5e-08
rheumatoid arthritis	5_132094425	rs657075	ENSG00000158987.20	RAPGEF6	459189	4.25e-05	0.20903	6e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000197536.11	IRF1-AS1	-316211	0.000110876	-0.178396	6e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000072682.18	P4HA2	-200890	9.69e-05	-0.290908	6e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000158987.20	RAPGEF6	459189	4.25e-05	0.20903	3e-10
rheumatoid arthritis	5_132094425	rs657075	ENSG00000197536.11	IRF1-AS1	-316211	0.000110876	-0.178396	3e-10
rheumatoid arthritis	5_132094425	rs657075	ENSG00000072682.18	P4HA2	-200890	9.69e-05	-0.290908	3e-10
rheumatoid arthritis	5_132094425	rs657075	ENSG00000158987.20	RAPGEF6	459189	4.25e-05	0.20903	8e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000197536.11	IRF1-AS1	-316211	0.000110876	-0.178396	8e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000072682.18	P4HA2	-200890	9.69e-05	-0.290908	8e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000158987.20	RAPGEF6	459189	4.25e-05	0.20903	1e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000197536.11	IRF1-AS1	-316211	0.000110876	-0.178396	1e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000072682.18	P4HA2	-200890	9.69e-05	-0.290908	1e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000158987.20	RAPGEF6	459189	4.25e-05	0.20903	8e-07
rheumatoid arthritis	5_132094425	rs657075	ENSG00000197536.11	IRF1-AS1	-316211	0.000110876	-0.178396	8e-07
rheumatoid arthritis	5_132094425	rs657075	ENSG00000072682.18	P4HA2	-200890	9.69e-05	-0.290908	8e-07
rheumatoid arthritis	5_132461855	rs6894249	ENSG00000197375.12	SLC22A5	92103	2.94e-06	0.162518	1e-14
rheumatoid arthritis	5_132461855	rs6894249	ENSG00000197208.5	SLC22A4	167412	8.99e-05	-0.168805	1e-14
rheumatoid arthritis	5_132461855	rs6894249	ENSG00000197536.11	IRF1-AS1	51219	2.79e-07	-0.135274	1e-14
rheumatoid arthritis	5_132461855	rs6894249	ENSG00000072682.18	P4HA2	166540	0.000325207	-0.154268	1e-14
rheumatoid arthritis	5_150858959	rs147018773	ENSG00000197083.11	ZNF300P1	-87330	9.24e-35	1.13585	2e-09
rheumatoid arthritis	6_167119305	rs3093024	ENSG00000026297.15	RNASET2	162121	1.05e-07	0.245398	8e-19
rheumatoid arthritis	6_167119574	rs1854853	ENSG00000026297.15	RNASET2	162390	1.04e-06	0.21974	2e-10
rheumatoid arthritis	6_167119574	rs1854853	ENSG00000026297.15	RNASET2	162390	1.04e-06	0.21974	7e-15
rheumatoid arthritis	6_167120802	rs3093023	ENSG00000026297.15	RNASET2	163618	3.06e-08	-0.259522	2e-11
rheumatoid arthritis	6_167120802	rs3093023	ENSG00000026297.15	RNASET2	163618	3.06e-08	-0.259522	4e-09
rheumatoid arthritis	6_167126167	rs3093019	ENSG00000026297.15	RNASET2	168983	9.14e-08	0.242066	1e-13
rheumatoid arthritis	6_167127354	rs1571878	ENSG00000026297.15	RNASET2	170170	5.92e-08	0.248908	5e-35
rheumatoid arthritis	6_167127354	rs1571878	ENSG00000026297.15	RNASET2	170170	5.92e-08	0.248908	4e-40
rheumatoid arthritis	6_167127354	rs1571878	ENSG00000026297.15	RNASET2	170170	5.92e-08	0.248908	1e-20
rheumatoid arthritis	6_167127354	rs1571878	ENSG00000026297.15	RNASET2	170170	5.92e-08	0.248908	1e-12
rheumatoid arthritis	6_167127354	rs1571878	ENSG00000026297.15	RNASET2	170170	5.92e-08	0.248908	2e-18
rheumatoid arthritis	6_167127354	rs1571878	ENSG00000026297.15	RNASET2	170170	5.92e-08	0.248908	2e-08
rheumatoid arthritis	6_167127354	rs1571878	ENSG00000026297.15	RNASET2	170170	5.92e-08	0.248908	5e-15
rheumatoid arthritis	6_167127354	rs1571878	ENSG00000026297.15	RNASET2	170170	5.92e-08	0.248908	1e-31
rheumatoid arthritis	6_167127354	rs1571878	ENSG00000026297.15	RNASET2	170170	5.92e-08	0.248908	1e-22
rheumatoid arthritis	6_167127354	rs1571878	ENSG00000026297.15	RNASET2	170170	5.92e-08	0.248908	5e-17
rheumatoid arthritis	6_167127770	rs3093017	ENSG00000026297.15	RNASET2	170586	5.27e-08	0.250158	2e-19
rheumatoid arthritis	6_167127770	rs3093017	ENSG00000026297.15	RNASET2	170586	5.27e-08	0.250158	4e-20
rheumatoid arthritis	6_167127770	rs3093017	ENSG00000026297.15	RNASET2	170586	5.27e-08	0.250158	2e-18
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204520.12	MICA	-14232	0.000231072	0.227912	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204301.6	NOTCH4	-838515	9.55e-07	-0.296616	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204525.16	HLA-C	113447	2.13e-15	0.55452	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000214894.6	LINC00243	554893	0.000270902	0.345062	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000244731.7	C4A	-596472	3.02e-25	-0.747351	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000224389.8	C4B	-629210	9.19e-06	0.326417	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204540.10	PSORS1C1	270802	3.56e-10	-0.6351	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204421.2	LY6G6C	-336293	5.66e-15	0.542191	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204351.11	SKIV2L	-573559	4.58e-05	-0.221537	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000277402.1	MIR6891	30236	4.53e-06	-0.422886	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204338.8	CYP21A1P	-620137	6.31e-17	-0.769882	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204516.9	MICB	-109329	5.53e-18	0.666561	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204420.8	MPIG6B	-337792	7.53e-07	0.325173	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204410.14	MSH5	-354396	0.000134592	-0.149458	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000137331.11	IER3	640998	0.000246973	0.210103	9e-09
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204421.2	LY6G6C	-67016	3.11e-05	-0.197294	3e-10
rheumatoid arthritis	6_31654829	rs805297	ENSG00000277402.1	MIR6891	299513	1.58e-06	0.294272	3e-10
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204338.8	CYP21A1P	-350860	9.46e-09	0.359317	3e-10
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204420.8	MPIG6B	-68515	2.9e-05	-0.183615	3e-10
rheumatoid arthritis	6_31654829	rs805297	ENSG00000213676.10	ATF6B	-473424	1.98e-07	0.184399	3e-10
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204525.16	HLA-C	382724	6.55e-06	-0.214872	3e-10
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204314.10	PRRT1	-499131	1.79e-06	0.146015	3e-10
rheumatoid arthritis	6_32251212	rs9296015	ENSG00000223534.1	HLA-DQB1-AS1	-409143	7.25e-05	-0.222024	2e-38
rheumatoid arthritis	6_32315077	rs6910071	ENSG00000237541.3	HLA-DQA2	-426265	7.99e-12	0.493516	1e-299
rheumatoid arthritis	6_32315077	rs6910071	ENSG00000244731.7	C4A	333053	1.51e-05	0.253398	1e-299
rheumatoid arthritis	6_32315077	rs6910071	ENSG00000204301.6	NOTCH4	91010	2.85e-08	0.258721	1e-299
rheumatoid arthritis	6_32315077	rs6910071	ENSG00000229391.7	HLA-DRB6	-244945	1.1e-06	0.337425	1e-299
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000232629.8	HLA-DQB2	-355338	1.9e-05	0.213025	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000250535.1	STK19B	394926	3.3e-05	0.307762	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000204338.8	CYP21A1P	402507	1.63e-07	0.360655	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000240053.8	LY6G5B	738029	0.000149584	-0.120972	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000237541.3	HLA-DQA2	-333146	4.59e-31	0.751332	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000229391.7	HLA-DRB6	-151826	9.5e-20	0.57468	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000196735.11	HLA-DQA1	-219983	5.65e-10	-0.28768	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000196126.11	HLA-DRB1	-181652	1.25e-06	-0.181949	2e-124
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000198502.5	HLA-DRB5	-108759	1.87e-07	-0.27856	3e-10
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000204314.10	PRRT1	267568	8.09e-08	0.149574	3e-10
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000240053.8	LY6G5B	751361	2.23e-05	-0.112644	3e-10
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000196735.11	HLA-DQA1	-206651	5.5e-05	-0.158154	3e-10
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000204344.14	STK19	450362	0.000245734	-0.140455	3e-10
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000250535.1	STK19B	408258	1.29e-06	0.2984	3e-10
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000179344.16	HLA-DQB1	-246855	1.68e-05	-0.223511	3e-10
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000204338.8	CYP21A1P	415839	6.16e-05	0.231735	3e-10
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000229391.7	HLA-DRB6	-138494	3.08e-07	0.278745	3e-10
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000204420.8	MPIG6B	698184	7.68e-05	-0.159048	3e-10
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000237541.3	HLA-DQA2	-319814	2.71e-07	0.295677	3e-10
rheumatoid arthritis	6_32446496	rs3129890	ENSG00000204338.8	CYP21A1P	440807	1.71e-08	-0.3768	1e-10
rheumatoid arthritis	6_32446496	rs3129890	ENSG00000244731.7	C4A	464472	2.56e-17	-0.441505	1e-10
rheumatoid arthritis	6_32446496	rs3129890	ENSG00000204516.9	MICB	951615	8.69e-07	0.277258	1e-10
rheumatoid arthritis	6_32446496	rs3129890	ENSG00000198502.5	HLA-DRB5	-83791	2.65e-09	-0.369112	1e-10
rheumatoid arthritis	6_32446496	rs3129890	ENSG00000204420.8	MPIG6B	723152	6.29e-07	0.232404	1e-10
rheumatoid arthritis	6_32446496	rs3129890	ENSG00000196735.11	HLA-DQA1	-181683	1.95e-05	0.195	1e-10
rheumatoid arthritis	6_32446496	rs3129890	ENSG00000204421.2	LY6G6C	724651	2.5e-06	0.237204	1e-10
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000196735.11	HLA-DQA1	-180876	9.91e-05	0.194962	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000204257.14	HLA-DMA	-521791	7.9e-05	0.155986	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000204301.6	NOTCH4	223236	3.47e-05	-0.195499	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000204338.8	CYP21A1P	441614	5.38e-07	-0.368071	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000204516.9	MICB	952422	1.44e-09	0.370645	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000244731.7	C4A	465279	1.68e-17	-0.48588	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000204420.8	MPIG6B	723959	0.000102395	0.199509	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000237541.3	HLA-DQA2	-294039	9.34e-05	-0.28861	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000204421.2	LY6G6C	725458	9.8e-06	0.244254	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000198502.5	HLA-DRB5	-82984	2.71e-09	-0.403843	2e-09
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000204338.8	CYP21A1P	455306	2.08e-07	0.301853	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000244731.7	C4A	478971	5.41e-07	0.232907	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.31e-23	0.558418	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	6.11e-17	-0.321632	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	5.56e-34	0.624931	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	1.81e-13	-0.229088	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	1.24e-11	-0.301705	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000204516.9	MICB	966114	1.3e-06	-0.236801	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.41e-09	-0.307621	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000204338.8	CYP21A1P	455306	2.08e-07	0.301853	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000244731.7	C4A	478971	5.41e-07	0.232907	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.31e-23	0.558418	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	6.11e-17	-0.321632	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	5.56e-34	0.624931	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	1.81e-13	-0.229088	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	1.24e-11	-0.301705	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000204516.9	MICB	966114	1.3e-06	-0.236801	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.41e-09	-0.307621	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000204338.8	CYP21A1P	455306	2.08e-07	0.301853	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000244731.7	C4A	478971	5.41e-07	0.232907	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.31e-23	0.558418	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	6.11e-17	-0.321632	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	5.56e-34	0.624931	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	1.81e-13	-0.229088	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	1.24e-11	-0.301705	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000204516.9	MICB	966114	1.3e-06	-0.236801	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.41e-09	-0.307621	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000204338.8	CYP21A1P	455306	2.08e-07	0.301853	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000244731.7	C4A	478971	5.41e-07	0.232907	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.31e-23	0.558418	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	6.11e-17	-0.321632	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	5.56e-34	0.624931	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	1.81e-13	-0.229088	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	1.24e-11	-0.301705	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000204516.9	MICB	966114	1.3e-06	-0.236801	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.41e-09	-0.307621	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000204338.8	CYP21A1P	455306	2.08e-07	0.301853	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000244731.7	C4A	478971	5.41e-07	0.232907	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.31e-23	0.558418	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	6.11e-17	-0.321632	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	5.56e-34	0.624931	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	1.81e-13	-0.229088	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	1.24e-11	-0.301705	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000204516.9	MICB	966114	1.3e-06	-0.236801	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.41e-09	-0.307621	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000204338.8	CYP21A1P	455306	2.08e-07	0.301853	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000244731.7	C4A	478971	5.41e-07	0.232907	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.31e-23	0.558418	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	6.11e-17	-0.321632	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	5.56e-34	0.624931	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	1.81e-13	-0.229088	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	1.24e-11	-0.301705	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000204516.9	MICB	966114	1.3e-06	-0.236801	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.41e-09	-0.307621	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000204338.8	CYP21A1P	455306	2.08e-07	0.301853	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000244731.7	C4A	478971	5.41e-07	0.232907	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.31e-23	0.558418	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196735.11	HLA-DQA1	-167184	6.11e-17	-0.321632	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	5.56e-34	0.624931	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	1.81e-13	-0.229088	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	1.24e-11	-0.301705	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000204516.9	MICB	966114	1.3e-06	-0.236801	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.41e-09	-0.307621	1e-250
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000204516.9	MICB	981540	1.3e-06	-0.236427	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000179344.16	HLA-DQB1	-191962	3.62e-09	-0.306676	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000196735.11	HLA-DQA1	-151758	4.42e-17	-0.322496	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000244731.7	C4A	494397	5.39e-07	0.232599	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000196126.11	HLA-DRB1	-113427	7.23e-14	-0.232272	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000237541.3	HLA-DQA2	-264921	1.75e-23	0.556156	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000229391.7	HLA-DRB6	-83601	1.39e-33	0.620756	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000223534.1	HLA-DQB1-AS1	-183934	7.65e-12	-0.304194	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000204338.8	CYP21A1P	470732	1.57e-07	0.304318	5e-58
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000229391.7	HLA-DRB6	-73863	1.05e-27	0.586916	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000196126.11	HLA-DRB1	-103689	7.11e-11	-0.210272	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000204516.9	MICB	991278	2.38e-05	-0.213558	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000237541.3	HLA-DQA2	-255183	7.6e-19	0.515327	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000204338.8	CYP21A1P	480470	2.63e-07	0.308306	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000196735.11	HLA-DQA1	-142020	8.58e-13	-0.286282	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000179344.16	HLA-DQB1	-182224	5.37e-07	-0.270176	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000223534.1	HLA-DQB1-AS1	-174196	3.45e-11	-0.304186	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000244731.7	C4A	504135	1.39e-07	0.251699	6e-227
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000204421.2	LY6G6C	811522	0.000205018	0.155051	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000196735.11	HLA-DQA1	-94812	0.0001026	0.146579	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000198502.5	HLA-DRB5	3080	7.72e-43	-0.644162	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000244731.7	C4A	551343	3.2e-14	-0.329133	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000204301.6	NOTCH4	309300	1.28e-09	-0.213482	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000204338.8	CYP21A1P	527678	1.33e-05	-0.241824	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000237541.3	HLA-DQA2	-207975	2.52e-06	-0.260899	9e-52
rheumatoid arthritis	6_32593593	rs35139284	ENSG00000204301.6	NOTCH4	369526	7.46e-05	0.154795	4e-287
rheumatoid arthritis	6_32593593	rs35139284	ENSG00000244731.7	C4A	611569	2.49e-05	0.205328	4e-287
rheumatoid arthritis	6_32593593	rs35139284	ENSG00000237541.3	HLA-DQA2	-147749	1.02e-07	0.322708	4e-287
rheumatoid arthritis	6_32593593	rs35139284	ENSG00000204338.8	CYP21A1P	587904	8.8e-05	0.239473	4e-287
rheumatoid arthritis	6_32593593	rs35139284	ENSG00000204314.10	PRRT1	439633	1.32e-05	0.128918	4e-287
rheumatoid arthritis	6_32593593	rs35139284	ENSG00000229391.7	HLA-DRB6	33571	9.37e-06	0.255655	4e-287
rheumatoid arthritis	6_32606394	rs615672	ENSG00000198502.5	HLA-DRB5	76107	3.79e-27	-0.543166	8e-27
rheumatoid arthritis	6_32606394	rs615672	ENSG00000204301.6	NOTCH4	382327	1.42e-06	-0.176163	8e-27
rheumatoid arthritis	6_32606394	rs615672	ENSG00000204338.8	CYP21A1P	600705	3.48e-07	-0.290352	8e-27
rheumatoid arthritis	6_32606394	rs615672	ENSG00000244731.7	C4A	624370	5.02e-15	-0.348998	8e-27
rheumatoid arthritis	6_32606394	rs615672	ENSG00000240065.7	PSMB9	-247767	5.81e-06	0.128823	8e-27
rheumatoid arthritis	6_32606394	rs615672	ENSG00000179344.16	HLA-DQB1	-61989	3.17e-06	-0.239397	8e-27
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	8.35e-13	0.445652	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000179344.16	HLA-DQB1	-58780	4.17e-08	-0.328292	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	7.75e-05	0.190863	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196735.11	HLA-DQA1	-18576	8.35e-12	-0.305455	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	7.97e-51	0.895641	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	1.86e-08	-0.203382	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000240053.8	LY6G5B	939436	0.000183521	-0.115558	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	8.35e-13	0.445652	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000179344.16	HLA-DQB1	-58780	4.17e-08	-0.328292	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	7.75e-05	0.190863	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196735.11	HLA-DQA1	-18576	8.35e-12	-0.305455	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	7.97e-51	0.895641	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	1.86e-08	-0.203382	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000240053.8	LY6G5B	939436	0.000183521	-0.115558	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	8.35e-13	0.445652	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000179344.16	HLA-DQB1	-58780	4.17e-08	-0.328292	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	7.75e-05	0.190863	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196735.11	HLA-DQA1	-18576	8.35e-12	-0.305455	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	7.97e-51	0.895641	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	1.86e-08	-0.203382	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000240053.8	LY6G5B	939436	0.000183521	-0.115558	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	8.35e-13	0.445652	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000179344.16	HLA-DQB1	-58780	4.17e-08	-0.328292	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	7.75e-05	0.190863	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196735.11	HLA-DQA1	-18576	8.35e-12	-0.305455	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	7.97e-51	0.895641	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	1.86e-08	-0.203382	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000240053.8	LY6G5B	939436	0.000183521	-0.115558	2e-08
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000196126.11	HLA-DRB1	25025	5.78e-08	-0.218338	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	1.35e-48	0.977997	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000204338.8	CYP21A1P	609184	5.17e-05	0.301903	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000179344.16	HLA-DQB1	-53510	2.48e-08	-0.37077	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	2.44e-21	0.64225	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000196735.11	HLA-DQA1	-13306	3.15e-17	-0.413581	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000241106.6	HLA-DOB	-202175	7.63e-06	0.294345	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000196126.11	HLA-DRB1	25025	5.78e-08	-0.218338	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	1.35e-48	0.977997	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000204338.8	CYP21A1P	609184	5.17e-05	0.301903	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000179344.16	HLA-DQB1	-53510	2.48e-08	-0.37077	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	2.44e-21	0.64225	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000196735.11	HLA-DQA1	-13306	3.15e-17	-0.413581	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000241106.6	HLA-DOB	-202175	7.63e-06	0.294345	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000229391.7	HLA-DRB6	55558	2.44e-21	0.64225	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000196126.11	HLA-DRB1	25732	5.78e-08	-0.218338	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000179344.16	HLA-DQB1	-52803	2.48e-08	-0.37077	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000204338.8	CYP21A1P	609891	5.17e-05	0.301903	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000196735.11	HLA-DQA1	-12599	3.15e-17	-0.413581	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000237541.3	HLA-DQA2	-125762	1.35e-48	0.977997	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000241106.6	HLA-DOB	-201468	7.63e-06	0.294345	2e-10
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000229391.7	HLA-DRB6	55943	6.84e-05	0.236808	5e-07
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000198502.5	HLA-DRB5	85678	1.53e-47	-0.758766	5e-07
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000240053.8	LY6G5B	945798	2.98e-05	-0.12043	5e-07
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000204421.2	LY6G6C	894120	2.14e-06	0.222332	5e-07
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000179344.16	HLA-DQB1	-52418	0.000197726	-0.21044	5e-07
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000204314.10	PRRT1	462005	1.73e-11	0.201657	5e-07
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000229391.7	HLA-DRB6	69223	1.13e-20	0.631897	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000179344.16	HLA-DQB1	-39138	2.84e-08	-0.368945	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000241106.6	HLA-DOB	-187803	1.76e-06	0.313594	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000196735.11	HLA-DQA1	1066	3.6e-17	-0.412556	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000196126.11	HLA-DRB1	39397	3.54e-08	-0.221543	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000204338.8	CYP21A1P	623556	5.56e-05	0.300416	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000237541.3	HLA-DQA2	-112097	1.44e-49	0.984924	3e-11
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000196735.11	HLA-DQA1	67895	3.8e-07	-0.193623	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000204338.8	CYP21A1P	690385	2.2e-07	0.291127	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000223534.1	HLA-DQB1-AS1	35719	1.79e-11	-0.289417	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000244731.7	C4A	714050	5.55e-05	0.182005	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000204314.10	PRRT1	542114	2.96e-06	0.127892	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000179344.16	HLA-DQB1	27691	1.85e-12	-0.351359	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000229391.7	HLA-DRB6	136052	4.33e-06	0.245354	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	4.97e-15	0.43126	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000196735.11	HLA-DQA1	67895	3.8e-07	-0.193623	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000204338.8	CYP21A1P	690385	2.2e-07	0.291127	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000223534.1	HLA-DQB1-AS1	35719	1.79e-11	-0.289417	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000244731.7	C4A	714050	5.55e-05	0.182005	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000204314.10	PRRT1	542114	2.96e-06	0.127892	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000179344.16	HLA-DQB1	27691	1.85e-12	-0.351359	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000229391.7	HLA-DRB6	136052	4.33e-06	0.245354	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	4.97e-15	0.43126	5e-75
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000244731.7	C4A	714198	5.55e-05	0.182005	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000204338.8	CYP21A1P	690533	2.2e-07	0.291127	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000229391.7	HLA-DRB6	136200	4.33e-06	0.245354	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000204314.10	PRRT1	542262	2.96e-06	0.127892	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000237541.3	HLA-DQA2	-45120	4.97e-15	0.43126	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000196735.11	HLA-DQA1	68043	3.8e-07	-0.193623	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000223534.1	HLA-DQB1-AS1	35867	1.79e-11	-0.289417	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000179344.16	HLA-DQB1	27839	1.85e-12	-0.351359	4e-186
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000204267.13	TAP2	-139450	1.37e-07	-0.257683	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000237541.3	HLA-DQA2	-42012	3.83e-26	0.901088	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000241106.6	HLA-DOB	-117718	1.19e-16	0.639097	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000179344.16	HLA-DQB1	30947	6.33e-06	-0.364449	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000196735.11	HLA-DQA1	71151	1.1e-10	-0.38788	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000229391.7	HLA-DRB6	139308	7.69e-14	0.622577	2e-06
rheumatoid arthritis	6_32702178	rs9275406	ENSG00000213719.8	CLIC1	962415	8.79e-05	0.0867651	3e-12
rheumatoid arthritis	6_32702178	rs9275406	ENSG00000244731.7	C4A	720154	7.59e-06	0.228536	3e-12
rheumatoid arthritis	6_32702178	rs9275406	ENSG00000237541.3	HLA-DQA2	-39164	0.000140518	0.244204	3e-12
rheumatoid arthritis	6_32703201	rs9275428	ENSG00000213719.8	CLIC1	963438	8.79e-05	0.0867651	2e-24
rheumatoid arthritis	6_32703201	rs9275428	ENSG00000244731.7	C4A	721177	7.59e-06	0.228536	2e-24
rheumatoid arthritis	6_32703201	rs9275428	ENSG00000237541.3	HLA-DQA2	-38141	0.000140518	0.244204	2e-24
rheumatoid arthritis	6_32703326	rs13192471	ENSG00000196735.11	HLA-DQA1	75147	5.16e-05	0.219003	2e-58
rheumatoid arthritis	6_32703326	rs13192471	ENSG00000237541.3	HLA-DQA2	-38016	2.81e-05	-0.333951	2e-58
rheumatoid arthritis	6_32703326	rs13192471	ENSG00000244731.7	C4A	721302	2.44e-05	0.268699	2e-58
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000237541.3	HLA-DQA2	-35545	3.83e-26	0.901088	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000241106.6	HLA-DOB	-111251	1.19e-16	0.639097	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000179344.16	HLA-DQB1	37414	6.33e-06	-0.364449	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000229391.7	HLA-DRB6	145775	7.69e-14	0.622577	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000196735.11	HLA-DQA1	77618	1.1e-10	-0.38788	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000204267.13	TAP2	-132983	1.37e-07	-0.257683	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000204267.13	TAP2	-131034	1.37e-07	-0.257683	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000179344.16	HLA-DQB1	39363	6.33e-06	-0.364449	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000241106.6	HLA-DOB	-109302	1.19e-16	0.639097	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000237541.3	HLA-DQA2	-33596	3.83e-26	0.901088	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000196735.11	HLA-DQA1	79567	1.1e-10	-0.38788	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000229391.7	HLA-DRB6	147724	7.69e-14	0.622577	2e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000179344.16	HLA-DQB1	39474	6.33e-06	-0.364449	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000204267.13	TAP2	-130923	1.37e-07	-0.257683	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000196735.11	HLA-DQA1	79678	1.1e-10	-0.38788	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000229391.7	HLA-DRB6	147835	7.69e-14	0.622577	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000241106.6	HLA-DOB	-109191	1.19e-16	0.639097	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000237541.3	HLA-DQA2	-33485	3.83e-26	0.901088	5e-06
rheumatoid arthritis	6_32713151	rs7765379	ENSG00000237541.3	HLA-DQA2	-28191	1.13e-11	0.629907	5e-23
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000241106.6	HLA-DOB	-103342	1.19e-16	0.639097	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000196735.11	HLA-DQA1	85527	1.1e-10	-0.38788	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000204267.13	TAP2	-125074	1.37e-07	-0.257683	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000229391.7	HLA-DRB6	153684	7.69e-14	0.622577	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000237541.3	HLA-DQA2	-27636	3.83e-26	0.901088	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000179344.16	HLA-DQB1	45323	6.33e-06	-0.364449	2e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000204267.13	TAP2	-125027	1.37e-07	-0.257683	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000241106.6	HLA-DOB	-103295	1.19e-16	0.639097	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000196735.11	HLA-DQA1	85574	1.1e-10	-0.38788	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000237541.3	HLA-DQA2	-27589	3.83e-26	0.901088	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000179344.16	HLA-DQB1	45370	6.33e-06	-0.364449	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000229391.7	HLA-DRB6	153731	7.69e-14	0.622577	1e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000196735.11	HLA-DQA1	86063	2.66e-10	-0.379059	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000229391.7	HLA-DRB6	154220	8.23e-14	0.620082	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000179344.16	HLA-DQB1	45859	1.38e-05	-0.350247	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000237541.3	HLA-DQA2	-27100	2.96e-25	0.88407	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000241106.6	HLA-DOB	-102806	1.61e-16	0.634679	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000204267.13	TAP2	-124538	1.59e-07	-0.255646	2e-06
rheumatoid arthritis	6_36387877	rs2234067	ENSG00000010030.13	ETV7	77	1.01e-13	0.377917	4e-08
rheumatoid arthritis	6_36387877	rs2234067	ENSG00000112079.8	STK38	-159593	8.3e-05	-0.156895	4e-08
rheumatoid arthritis	6_36387877	rs2234067	ENSG00000010030.13	ETV7	77	1.01e-13	0.377917	2e-09
rheumatoid arthritis	6_36387877	rs2234067	ENSG00000112079.8	STK38	-159593	8.3e-05	-0.156895	2e-09
rheumatoid arthritis	7_128932712	rs4731532	ENSG00000128604.19	IRF5	-4900	4.13e-43	0.422399	1e-07
rheumatoid arthritis	7_128933913	rs4728142	ENSG00000128604.19	IRF5	-3699	1.09e-36	0.404685	7e-10
rheumatoid arthritis	7_128933913	rs4728142	ENSG00000128604.19	IRF5	-3699	1.09e-36	0.404685	5e-12
rheumatoid arthritis	7_128936032	rs3757387	ENSG00000128604.19	IRF5	-1580	4.86e-39	0.402947	5e-09
rheumatoid arthritis	7_128936032	rs3757387	ENSG00000128604.19	IRF5	-1580	4.86e-39	0.402947	2e-19
rheumatoid arthritis	7_128939988	rs3778753	ENSG00000128604.19	IRF5	2376	5.58e-33	0.368211	4e-12
rheumatoid arthritis	7_128939988	rs3778753	ENSG00000128604.19	IRF5	2376	5.58e-33	0.368211	3e-14
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	6.95e-30	0.351952	3e-07
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	6.95e-30	0.351952	7e-10
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	6.95e-30	0.351952	5e-10
rheumatoid arthritis	7_128949579	rs10954214	ENSG00000128604.19	IRF5	11967	1.98e-15	0.268959	7e-17
rheumatoid arthritis	7_74123572	rs193107685	ENSG00000165171.10	METTL27	281037	5.68e-05	0.964404	3e-09
rheumatoid arthritis	7_92607515	rs4272	ENSG00000157259.6	GATAD1	160062	1.19e-12	-0.228622	5e-09
rheumatoid arthritis	7_92607515	rs4272	ENSG00000157259.6	GATAD1	160062	1.19e-12	-0.228622	5e-07
rheumatoid arthritis	7_92607515	rs4272	ENSG00000157259.6	GATAD1	160062	1.19e-12	-0.228622	1e-08
rheumatoid arthritis	7_92607515	rs4272	ENSG00000157259.6	GATAD1	160062	1.19e-12	-0.228622	3e-07
rheumatoid arthritis	7_92609830	rs42034	ENSG00000157259.6	GATAD1	162377	4.86e-10	-0.194702	1e-08
rheumatoid arthritis	7_92617430	rs42041	ENSG00000157259.6	GATAD1	169977	9.06e-11	-0.201126	4e-06
rheumatoid arthritis	8_11480861	rs2618444	ENSG00000136573.12	BLK	-13140	3.48e-05	-0.16574	7e-12
rheumatoid arthritis	8_11480861	rs2618444	ENSG00000154319.14	FAM167A	6146	7.27e-05	0.184262	7e-12
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000154319.14	FAM167A	9656	5.59e-05	0.18601	2e-07
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	4.53e-05	0.299778	2e-07
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000136573.12	BLK	-9630	3.13e-05	-0.165733	2e-07
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000154319.14	FAM167A	9656	5.59e-05	0.18601	8e-08
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	4.53e-05	0.299778	8e-08
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000136573.12	BLK	-9630	3.13e-05	-0.165733	8e-08
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000154319.14	FAM167A	9656	5.59e-05	0.18601	5e-22
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	4.53e-05	0.299778	5e-22
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000136573.12	BLK	-9630	3.13e-05	-0.165733	5e-22
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000154319.14	FAM167A	9656	5.59e-05	0.18601	2e-06
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	4.53e-05	0.299778	2e-06
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000136573.12	BLK	-9630	3.13e-05	-0.165733	2e-06
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000154319.14	FAM167A	9656	5.59e-05	0.18601	2e-07
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	4.53e-05	0.299778	2e-07
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000136573.12	BLK	-9630	3.13e-05	-0.165733	2e-07
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000154319.14	FAM167A	9656	5.59e-05	0.18601	3e-13
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	4.53e-05	0.299778	3e-13
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000136573.12	BLK	-9630	3.13e-05	-0.165733	3e-13
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000154319.14	FAM167A	9656	5.59e-05	0.18601	4e-13
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	4.53e-05	0.299778	4e-13
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000136573.12	BLK	-9630	3.13e-05	-0.165733	4e-13
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000136573.12	BLK	-7537	0.000109123	-0.152834	6e-09
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000227888.4	FAM66A	-875555	0.000110632	0.281869	6e-09
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000136573.12	BLK	-7537	0.000109123	-0.152834	9e-12
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000227888.4	FAM66A	-875555	0.000110632	0.281869	9e-12
rheumatoid arthritis	8_11488036	rs4840565	ENSG00000154319.14	FAM167A	13321	7.11e-05	0.172929	4e-06
rheumatoid arthritis	8_11491452	rs9693589	ENSG00000136573.12	BLK	-2549	0.000108706	-0.155711	2e-18
rheumatoid arthritis	8_11502129	rs1600249	ENSG00000136573.12	BLK	8128	2.68e-05	-0.171091	5e-06
rheumatoid arthritis	8_11502129	rs1600249	ENSG00000227888.4	FAM66A	-859890	6.8e-05	0.299857	5e-06
rheumatoid arthritis	8_129939865	rs11785995	ENSG00000147697.8	GSDMC	152977	1.63e-06	-0.433112	2e-10
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000095261.13	PSMD5	30859	5.87e-07	-0.141667	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000106804.7	C5	-176433	1.7e-05	0.14295	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000119396.10	RAB14	-349171	7.94e-10	-0.130105	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	1.82e-09	-0.153141	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	2.18e-27	-0.58696	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000095261.13	PSMD5	30859	5.87e-07	-0.141667	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000106804.7	C5	-176433	1.7e-05	0.14295	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000119396.10	RAB14	-349171	7.94e-10	-0.130105	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	1.82e-09	-0.153141	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	2.18e-27	-0.58696	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000095261.13	PSMD5	30859	5.87e-07	-0.141667	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000106804.7	C5	-176433	1.7e-05	0.14295	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000119396.10	RAB14	-349171	7.94e-10	-0.130105	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	1.82e-09	-0.153141	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	2.18e-27	-0.58696	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000095261.13	PSMD5	30859	5.87e-07	-0.141667	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000106804.7	C5	-176433	1.7e-05	0.14295	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000119396.10	RAB14	-349171	7.94e-10	-0.130105	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	1.82e-09	-0.153141	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	2.18e-27	-0.58696	4e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000226752.9	CUTALP	64195	3.66e-31	-0.622915	3e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000106804.7	C5	-161253	3.79e-05	0.137128	3e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000119396.10	RAB14	-333991	1.48e-09	-0.128168	3e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000095261.13	PSMD5	46039	4.5e-08	-0.154775	3e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000056558.10	TRAF1	-40150	1.51e-10	-0.16275	3e-09
rheumatoid arthritis	9_120890620	rs881375	ENSG00000119396.10	RAB14	-332394	4.47e-06	-0.103326	4e-08
rheumatoid arthritis	9_120890620	rs881375	ENSG00000119403.13	PHF19	-4276	0.000134573	0.0947341	4e-08
rheumatoid arthritis	9_120890620	rs881375	ENSG00000226752.9	CUTALP	65792	5.86e-31	-0.653927	4e-08
rheumatoid arthritis	9_120890620	rs881375	ENSG00000095261.13	PSMD5	47636	2.52e-07	-0.153919	4e-08
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000095261.13	PSMD5	57356	1.44e-08	-0.160405	4e-12
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000056558.10	TRAF1	-28833	4.22e-10	-0.159116	4e-12
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000226752.9	CUTALP	75512	1.26e-32	-0.636714	4e-12
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000106804.7	C5	-149936	4.07e-05	0.136792	4e-12
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000119396.10	RAB14	-322674	6.63e-10	-0.130947	4e-12
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000119403.13	PHF19	11025	0.000148337	0.0939838	1e-10
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000226752.9	CUTALP	81093	1.13e-31	-0.659529	1e-10
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000119396.10	RAB14	-317093	4.33e-06	-0.103297	1e-10
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000095261.13	PSMD5	62937	2.66e-07	-0.153363	1e-10
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	4.71e-27	-0.575677	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000106804.7	C5	-128985	0.000173161	0.123421	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000095261.13	PSMD5	78307	3.77e-07	-0.142045	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000056558.10	TRAF1	-7882	5.09e-12	-0.172263	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000119396.10	RAB14	-301723	1.46e-08	-0.118712	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	4.71e-27	-0.575677	4e-07
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000106804.7	C5	-128985	0.000173161	0.123421	4e-07
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000095261.13	PSMD5	78307	3.77e-07	-0.142045	4e-07
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000056558.10	TRAF1	-7882	5.09e-12	-0.172263	4e-07
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000119396.10	RAB14	-301723	1.46e-08	-0.118712	4e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000095261.13	PSMD5	84977	8.19e-07	-0.1379	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000106804.7	C5	-122315	0.000201599	0.122112	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	3.48e-27	-0.576636	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000056558.10	TRAF1	-1212	4.73e-11	-0.164495	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000119396.10	RAB14	-295053	1.69e-08	-0.118128	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000095261.13	PSMD5	84977	8.19e-07	-0.1379	4e-14
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000106804.7	C5	-122315	0.000201599	0.122112	4e-14
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	3.48e-27	-0.576636	4e-14
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000056558.10	TRAF1	-1212	4.73e-11	-0.164495	4e-14
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000119396.10	RAB14	-295053	1.69e-08	-0.118128	4e-14
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000119396.10	RAB14	-290010	1.87e-06	-0.106367	2e-06
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000095261.13	PSMD5	90020	2.07e-07	-0.153721	2e-06
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000226752.9	CUTALP	108176	5.81e-32	-0.657972	2e-06
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000095261.13	PSMD5	101120	1.27e-07	-0.15722	6e-09
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000226752.9	CUTALP	119276	4.44e-32	-0.662889	6e-09
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000119396.10	RAB14	-278910	9.48e-07	-0.109949	6e-09
rheumatoid arthritis	9_136378050	rs3812565	ENSG00000148384.12	INPP5E	-61773	1.09e-12	-0.180062	2e-09
rheumatoid arthritis	9_136378050	rs3812565	ENSG00000213221.4	DNLZ	14261	1.64e-05	-0.224939	2e-09
rheumatoid arthritis	9_136395373	rs4266763	ENSG00000148384.12	INPP5E	-44450	8.08e-13	-0.176202	1e-13
rheumatoid arthritis	9_136395373	rs4266763	ENSG00000165689.16	ENTR1	-15196	5.2e-05	-0.0917537	1e-13
rheumatoid arthritis	9_34743684	rs951005	ENSG00000164967.9	RPP25L	131580	0.000194758	-0.144345	4e-10
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	1.73e-26	-0.485426	3e-12
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	1.73e-26	-0.485426	1e-12
rheumatoid arthritis	X_154018741	rs1059702	ENSG00000177854.7	TMEM187	46414	1.49e-24	0.459257	5e-10
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	1.37e-21	0.411058	3e-12
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	1.37e-21	0.411058	5e-16
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	1.37e-21	0.411058	4e-22
rheumatoid arthritis	X_79110630	rs6619397	ENSG00000187325.4	TAF9B	970924	7.5e-05	-0.360413	6e-12