DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE rheumatoid arthritis 1_161435263 rs72717009 ENSG00000225217.1 HSPA7 -171028 4.01e-09 -0.488079 1e-07 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000244682.7 FCGR2C -146076 3.53e-13 -0.534412 1e-07 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000225217.1 HSPA7 -171028 4.01e-09 -0.488079 1e-06 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000244682.7 FCGR2C -146076 3.53e-13 -0.534412 1e-06 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000225217.1 HSPA7 -171028 4.01e-09 -0.488079 5e-07 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000244682.7 FCGR2C -146076 3.53e-13 -0.534412 5e-07 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000225217.1 HSPA7 -171028 4.01e-09 -0.488079 2e-06 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000244682.7 FCGR2C -146076 3.53e-13 -0.534412 2e-06 rheumatoid arthritis 1_161505960 rs10494360 ENSG00000244682.7 FCGR2C -75379 1.85e-14 -0.622114 3e-07 rheumatoid arthritis 1_161505960 rs10494360 ENSG00000225217.1 HSPA7 -100331 2.37e-10 -0.58086 3e-07 rheumatoid arthritis 1_17087404 rs761426 ENSG00000117115.12 PADI2 -32031 4.63e-14 -0.403851 2e-10 rheumatoid arthritis 1_17087404 rs761426 ENSG00000058453.16 CROCC 165454 2.44e-11 0.224355 2e-10 rheumatoid arthritis 1_17087404 rs761426 ENSG00000117115.12 PADI2 -32031 4.63e-14 -0.403851 1e-06 rheumatoid arthritis 1_17087404 rs761426 ENSG00000058453.16 CROCC 165454 2.44e-11 0.224355 1e-06 rheumatoid arthritis 1_17103279 rs2235909 ENSG00000117115.12 PADI2 -16156 6.85e-14 -0.358931 2e-09 rheumatoid arthritis 1_17103279 rs2235909 ENSG00000058453.16 CROCC 181329 1.75e-06 0.14611 2e-09 rheumatoid arthritis 1_17346235 rs2301888 ENSG00000159339.13 PADI4 38040 2.53e-10 0.281183 6e-09 rheumatoid arthritis 1_17346235 rs2301888 ENSG00000159339.13 PADI4 38040 2.53e-10 0.281183 1e-18 rheumatoid arthritis 1_17346235 rs2301888 ENSG00000159339.13 PADI4 38040 2.53e-10 0.281183 9e-13 rheumatoid arthritis 1_17346235 rs2301888 ENSG00000159339.13 PADI4 38040 2.53e-10 0.281183 5e-21 rheumatoid arthritis 1_17346235 rs2301888 ENSG00000159339.13 PADI4 38040 2.53e-10 0.281183 6e-09 rheumatoid arthritis 1_17346235 rs2301888 ENSG00000159339.13 PADI4 38040 2.53e-10 0.281183 6e-19 rheumatoid arthritis 1_17346235 rs2301888 ENSG00000159339.13 PADI4 38040 2.53e-10 0.281183 8e-13 rheumatoid arthritis 1_17346235 rs2301888 ENSG00000159339.13 PADI4 38040 2.53e-10 0.281183 4e-26 rheumatoid arthritis 1_17347613 rs2240339 ENSG00000159339.13 PADI4 39418 3.9e-09 0.259306 3e-10 rheumatoid arthritis 1_17347613 rs2240339 ENSG00000159339.13 PADI4 39418 3.9e-09 0.259306 1e-10 rheumatoid arthritis 1_17348042 rs2240335 ENSG00000159339.13 PADI4 39847 7.49e-09 0.254822 2e-08 rheumatoid arthritis 1_17348042 rs2240335 ENSG00000159339.13 PADI4 39847 7.49e-09 0.254822 2e-08 rheumatoid arthritis 1_186663185 rs10911902 ENSG00000116690.12 PRG4 366906 4.22e-05 0.313552 2e-08 rheumatoid arthritis 1_2608357 rs4073285 ENSG00000215912.12 TTC34 -193360 1.96e-05 0.219866 2e-13 rheumatoid arthritis 1_2622185 rs3890745 ENSG00000215912.12 TTC34 -179532 2.22e-05 0.214372 4e-06 rheumatoid arthritis 1_2622185 rs3890745 ENSG00000215912.12 TTC34 -179532 2.22e-05 0.214372 1e-06 rheumatoid arthritis 1_2622185 rs3890745 ENSG00000215912.12 TTC34 -179532 2.22e-05 0.214372 1e-07 rheumatoid arthritis 1_2622185 rs3890745 ENSG00000215912.12 TTC34 -179532 2.22e-05 0.214372 2e-08 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000204084.12 INPP5B -134150 1.98e-23 0.507478 6e-09 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000204084.12 INPP5B -134150 1.98e-23 0.507478 2e-11 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000204084.12 INPP5B -134150 1.98e-23 0.507478 3e-12 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000204084.12 INPP5B -134150 1.98e-23 0.507478 6e-12 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000204084.12 INPP5B -134150 1.98e-23 0.507478 5e-09 rheumatoid arthritis 11_609888 rs12421158 ENSG00000177042.14 TMEM80 -85645 1.49e-11 0.362295 4e-06 rheumatoid arthritis 11_61138978 rs508970 ENSG00000110448.10 CD5 36583 9.23e-07 -0.262701 3e-06 rheumatoid arthritis 11_61138978 rs508970 ENSG00000110448.10 CD5 36583 9.23e-07 -0.262701 4e-06 rheumatoid arthritis 11_61142109 rs595158 ENSG00000110448.10 CD5 39714 4.4e-06 -0.244165 6e-06 rheumatoid arthritis 11_61142109 rs595158 ENSG00000110448.10 CD5 39714 4.4e-06 -0.244165 3e-08 rheumatoid arthritis 11_61142109 rs595158 ENSG00000110448.10 CD5 39714 4.4e-06 -0.244165 6e-06 rheumatoid arthritis 11_61822009 rs28456 ENSG00000149485.18 FADS1 -7309 6.67e-08 -0.179895 4e-06 rheumatoid arthritis 11_61822009 rs28456 ENSG00000134824.13 FADS2 5753 1.24e-20 0.379515 4e-06 rheumatoid arthritis 11_61828092 rs968567 ENSG00000134824.13 FADS2 11836 3.83e-35 0.645555 2e-08 rheumatoid arthritis 11_61828092 rs968567 ENSG00000134824.13 FADS2 11836 3.83e-35 0.645555 7e-07 rheumatoid arthritis 11_633689 rs7929541 ENSG00000177042.14 TMEM80 -61844 2.16e-18 0.462503 2e-10 rheumatoid arthritis 11_64275525 rs660442 ENSG00000173457.10 PPP1R14B 28587 1.07e-05 -0.167368 1e-09 rheumatoid arthritis 11_64275525 rs660442 ENSG00000168071.21 CCDC88B -64698 8.64e-05 -0.186047 1e-09 rheumatoid arthritis 11_72662452 rs3781913 ENSG00000214530.8 STARD10 -131716 1.86e-05 0.144033 6e-10 rheumatoid arthritis 12_48021974 rs4760609 ENSG00000167528.12 ZNF641 -329440 2.01e-06 0.203527 3e-12 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 3.24e-65 0.816501 9e-08 rheumatoid arthritis 12_56001170 rs773125 ENSG00000111540.15 RAB5B 27257 1.81e-05 -0.0964606 9e-08 rheumatoid arthritis 12_56001170 rs773125 ENSG00000139531.12 SUOX 3990 2.36e-15 -0.155166 9e-08 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 3.24e-65 0.816501 1e-10 rheumatoid arthritis 12_56001170 rs773125 ENSG00000111540.15 RAB5B 27257 1.81e-05 -0.0964606 1e-10 rheumatoid arthritis 12_56001170 rs773125 ENSG00000139531.12 SUOX 3990 2.36e-15 -0.155166 1e-10 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 3.24e-65 0.816501 2e-08 rheumatoid arthritis 12_56001170 rs773125 ENSG00000111540.15 RAB5B 27257 1.81e-05 -0.0964606 2e-08 rheumatoid arthritis 12_56001170 rs773125 ENSG00000139531.12 SUOX 3990 2.36e-15 -0.155166 2e-08 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 3.24e-65 0.816501 1e-09 rheumatoid arthritis 12_56001170 rs773125 ENSG00000111540.15 RAB5B 27257 1.81e-05 -0.0964606 1e-09 rheumatoid arthritis 12_56001170 rs773125 ENSG00000139531.12 SUOX 3990 2.36e-15 -0.155166 1e-09 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000135502.17 SLC26A10 -44595 2.36e-09 0.220872 1e-07 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000135502.17 SLC26A10 -44595 2.36e-09 0.220872 9e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000166896.7 ATP23 -227272 0.000104508 0.238088 7e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000135502.17 SLC26A10 94742 1.12e-17 -0.30869 7e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123297.17 TSFM -68320 1.23e-09 0.170709 7e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 1.21e-08 -0.188722 7e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000166896.7 ATP23 -227272 0.000104508 0.238088 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000135502.17 SLC26A10 94742 1.12e-17 -0.30869 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123297.17 TSFM -68320 1.23e-09 0.170709 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 1.21e-08 -0.188722 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000166896.7 ATP23 -227272 0.000104508 0.238088 9e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000135502.17 SLC26A10 94742 1.12e-17 -0.30869 9e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123297.17 TSFM -68320 1.23e-09 0.170709 9e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 1.21e-08 -0.188722 9e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000166896.7 ATP23 -227272 0.000104508 0.238088 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000135502.17 SLC26A10 94742 1.12e-17 -0.30869 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123297.17 TSFM -68320 1.23e-09 0.170709 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 1.21e-08 -0.188722 1e-07 rheumatoid arthritis 13_39760715 rs9603612 ENSG00000133103.16 COG6 105088 8.75e-16 -0.224909 3e-13 rheumatoid arthritis 13_39776775 rs7993214 ENSG00000133103.16 COG6 121148 1.45e-14 0.211641 5e-06 rheumatoid arthritis 13_39781776 rs9532434 ENSG00000133103.16 COG6 126149 2.77e-14 0.21173 2e-19 rheumatoid arthritis 13_39793932 rs9603616 ENSG00000133103.16 COG6 138305 2.94e-15 -0.219668 8e-11 rheumatoid arthritis 13_39793932 rs9603616 ENSG00000133103.16 COG6 138305 2.94e-15 -0.219668 2e-12 rheumatoid arthritis 13_39793932 rs9603616 ENSG00000133103.16 COG6 138305 2.94e-15 -0.219668 3e-11 rheumatoid arthritis 13_39793932 rs9603616 ENSG00000133103.16 COG6 138305 2.94e-15 -0.219668 2e-12 rheumatoid arthritis 13_39797240 rs9603618 ENSG00000133103.16 COG6 141613 6.11e-14 -0.225183 5e-09 rheumatoid arthritis 14_104919812 rs2841269 ENSG00000140104.13 CLBA1 -65963 6.19e-08 0.278495 2e-16 rheumatoid arthritis 14_104924668 rs2841277 ENSG00000140104.13 CLBA1 -61107 7.02e-11 0.335704 2e-14 rheumatoid arthritis 14_54881400 rs3783637 ENSG00000131979.18 GCH1 -21452 7.65e-06 -0.202691 2e-06 rheumatoid arthritis 15_90350436 rs6496667 ENSG00000140575.12 IQGAP1 -37782 3.57e-32 0.3549 1e-06 rheumatoid arthritis 15_90483245 rs8040585 ENSG00000196391.10 ZNF774 131000 2.03e-05 0.15199 2e-08 rheumatoid arthritis 15_90483245 rs8040585 ENSG00000140575.12 IQGAP1 95027 4e-21 0.25624 2e-08 rheumatoid arthritis 16_11740030 rs7206670 ENSG00000184602.5 SNN 71616 4.58e-08 0.204199 4e-09 rheumatoid arthritis 16_11745470 rs4780401 ENSG00000153066.12 TXNDC11 9237 3.6e-05 -0.153806 6e-07 rheumatoid arthritis 16_11745470 rs4780401 ENSG00000184602.5 SNN 77056 3.66e-10 0.235449 6e-07 rheumatoid arthritis 16_11745470 rs4780401 ENSG00000153066.12 TXNDC11 9237 3.6e-05 -0.153806 4e-08 rheumatoid arthritis 16_11745470 rs4780401 ENSG00000184602.5 SNN 77056 3.66e-10 0.235449 4e-08 rheumatoid arthritis 16_11745470 rs4780401 ENSG00000153066.12 TXNDC11 9237 3.6e-05 -0.153806 5e-07 rheumatoid arthritis 16_11745470 rs4780401 ENSG00000184602.5 SNN 77056 3.66e-10 0.235449 5e-07 rheumatoid arthritis 16_11745470 rs4780401 ENSG00000153066.12 TXNDC11 9237 3.6e-05 -0.153806 9e-09 rheumatoid arthritis 16_11745470 rs4780401 ENSG00000184602.5 SNN 77056 3.66e-10 0.235449 9e-09 rheumatoid arthritis 16_30615295 rs12918327 ENSG00000099377.13 HSD3B7 -372976 0.000142769 0.133893 3e-08 rheumatoid arthritis 16_30615295 rs12918327 ENSG00000103549.21 RNF40 -147823 6.62e-06 0.138824 3e-08 rheumatoid arthritis 17_39583908 rs1877030 ENSG00000161395.13 PGAP3 -112889 1.71e-10 -0.26335 1e-08 rheumatoid arthritis 17_39583908 rs1877030 ENSG00000161395.13 PGAP3 -112889 1.71e-10 -0.26335 2e-08 rheumatoid arthritis 17_39877024 rs1054609 ENSG00000161395.13 PGAP3 180227 3.69e-10 -0.1904 6e-07 rheumatoid arthritis 17_39877024 rs1054609 ENSG00000167914.11 GSDMA -76239 2.72e-08 0.355461 6e-07 rheumatoid arthritis 17_39884510 rs2872507 ENSG00000161395.13 PGAP3 187713 3.69e-10 -0.1904 3e-09 rheumatoid arthritis 17_39884510 rs2872507 ENSG00000167914.11 GSDMA -68753 2.72e-08 0.355461 3e-09 rheumatoid arthritis 17_39884510 rs2872507 ENSG00000161395.13 PGAP3 187713 3.69e-10 -0.1904 9e-07 rheumatoid arthritis 17_39884510 rs2872507 ENSG00000167914.11 GSDMA -68753 2.72e-08 0.355461 9e-07 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000141744.3 PNMT 219415 6.05e-05 -0.140771 1e-10 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000167914.11 GSDMA -65867 7.12e-09 0.378584 1e-10 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000161395.13 PGAP3 190599 1.11e-09 -0.190051 1e-10 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000141744.3 PNMT 219415 6.05e-05 -0.140771 4e-07 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000167914.11 GSDMA -65867 7.12e-09 0.378584 4e-07 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000161395.13 PGAP3 190599 1.11e-09 -0.190051 4e-07 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000141744.3 PNMT 219415 6.05e-05 -0.140771 7e-07 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000167914.11 GSDMA -65867 7.12e-09 0.378584 7e-07 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000161395.13 PGAP3 190599 1.11e-09 -0.190051 7e-07 rheumatoid arthritis 17_39905943 rs2305480 ENSG00000141744.3 PNMT 237962 5.42e-05 -0.142449 4e-09 rheumatoid arthritis 17_39905943 rs2305480 ENSG00000167914.11 GSDMA -47320 1.21e-08 0.375133 4e-09 rheumatoid arthritis 17_39905943 rs2305480 ENSG00000161395.13 PGAP3 209146 4.58e-10 -0.195235 4e-09 rheumatoid arthritis 18_79400235 rs56376587 ENSG00000131196.17 NFATC1 4379 7.61e-11 -0.243515 4e-09 rheumatoid arthritis 19_10338682 rs7258015 ENSG00000105376.4 ICAM5 48701 2.49e-06 0.282015 3e-08 rheumatoid arthritis 19_10351837 rs11085725 ENSG00000105376.4 ICAM5 61856 1.11e-07 -0.286748 3e-10 rheumatoid arthritis 2_190673836 rs10931468 ENSG00000198130.15 HIBCH 353791 8.34e-05 -0.183775 1e-08 rheumatoid arthritis 2_190700031 rs744600 ENSG00000198130.15 HIBCH 379986 1.84e-09 0.199422 7e-11 rheumatoid arthritis 2_197748584 rs770667 ENSG00000162944.10 RFTN2 72539 5.37e-05 -0.112653 2e-08 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000240344.8 PPIL3 400371 2.75e-14 -0.617219 3e-07 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000240344.8 PPIL3 400371 2.75e-14 -0.617219 5e-07 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000240344.8 PPIL3 400371 2.75e-14 -0.617219 3e-09 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000240344.8 PPIL3 400371 2.75e-14 -0.617219 2e-09 rheumatoid arthritis 2_60841032 rs1432296 ENSG00000162927.13 PUS10 -177129 0.000115956 0.308386 8e-10 rheumatoid arthritis 2_70532029 rs428225 ENSG00000163235.15 TGFA -22164 6.51e-06 -0.263292 8e-06 rheumatoid arthritis 20_37423443 rs6018432 ENSG00000101425.12 BPI -836706 5.2e-05 -0.272893 4e-13 rheumatoid arthritis 20_46105671 rs6032662 ENSG00000101017.13 CD40 -12601 5.28e-09 0.217714 1e-09 rheumatoid arthritis 20_46118343 rs1883832 ENSG00000101017.13 CD40 71 3.48e-09 0.221235 9e-15 rheumatoid arthritis 20_46118343 rs1883832 ENSG00000101017.13 CD40 71 3.48e-09 0.221235 2e-13 rheumatoid arthritis 20_46118343 rs1883832 ENSG00000101017.13 CD40 71 3.48e-09 0.221235 1e-16 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000101017.13 CD40 1036 1.62e-08 0.209688 9e-11 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000101017.13 CD40 1036 1.62e-08 0.209688 8e-09 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000101017.13 CD40 1036 1.62e-08 0.209688 2e-07 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000101017.13 CD40 1036 1.62e-08 0.209688 3e-09 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000101017.13 CD40 2340 9.48e-07 0.169694 4e-14 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000101017.13 CD40 2340 9.48e-07 0.169694 4e-18 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000101017.13 CD40 2340 9.48e-07 0.169694 3e-14 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000101017.13 CD40 2340 9.48e-07 0.169694 1e-16 rheumatoid arthritis 22_21561877 rs5754100 ENSG00000161180.10 CCDC116 -70839 2.25e-06 -0.335492 9e-09 rheumatoid arthritis 22_21562072 rs5754104 ENSG00000161180.10 CCDC116 -70644 1.01e-05 -0.318778 1e-10 rheumatoid arthritis 22_21602364 rs2283790 ENSG00000161180.10 CCDC116 -30352 3.15e-06 -0.322907 2e-11 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000161180.10 CCDC116 -7909 1.46e-07 -0.369147 4e-06 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000161180.10 CCDC116 -7909 1.46e-07 -0.369147 1e-09 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000161180.10 CCDC116 -7909 1.46e-07 -0.369147 6e-07 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000161180.10 CCDC116 -7909 1.46e-07 -0.369147 2e-09 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000161180.10 CCDC116 -7909 1.46e-07 -0.369147 2e-07 rheumatoid arthritis 22_21625000 rs4821124 ENSG00000161180.10 CCDC116 -7716 3.85e-06 -0.32409 2e-11 rheumatoid arthritis 22_21630805 rs5754467 ENSG00000161180.10 CCDC116 -1911 1.69e-05 -0.293678 1e-13 rheumatoid arthritis 3_49660026 rs9836291 ENSG00000173531.15 MST1 -29472 0.000373528 0.12486 6e-06 rheumatoid arthritis 3_49660026 rs9836291 ENSG00000004534.14 RBM6 -279981 2.32e-11 0.234694 6e-06 rheumatoid arthritis 3_49660026 rs9836291 ENSG00000226913.1 BSN-DT 105660 0.000364226 0.221323 6e-06 rheumatoid arthritis 3_49674864 rs11130213 ENSG00000173531.15 MST1 -14634 0.00029938 0.126073 5e-07 rheumatoid arthritis 3_49674864 rs11130213 ENSG00000004534.14 RBM6 -265143 3.72e-10 0.219553 5e-07 rheumatoid arthritis 3_58197909 rs35677470 ENSG00000168297.15 PXK -134971 9.15e-05 0.294444 2e-08 rheumatoid arthritis 3_58197909 rs35677470 ENSG00000163684.11 RPP14 -108338 0.000107145 -0.304837 2e-08 rheumatoid arthritis 3_58197909 rs35677470 ENSG00000168297.15 PXK -134971 9.15e-05 0.294444 2e-07 rheumatoid arthritis 3_58197909 rs35677470 ENSG00000163684.11 RPP14 -108338 0.000107145 -0.304837 2e-07 rheumatoid arthritis 3_58197909 rs35677470 ENSG00000168297.15 PXK -134971 9.15e-05 0.294444 5e-09 rheumatoid arthritis 3_58197909 rs35677470 ENSG00000163684.11 RPP14 -108338 0.000107145 -0.304837 5e-09 rheumatoid arthritis 3_58197909 rs35677470 ENSG00000168297.15 PXK -134971 9.15e-05 0.294444 1e-06 rheumatoid arthritis 3_58197909 rs35677470 ENSG00000163684.11 RPP14 -108338 0.000107145 -0.304837 1e-06 rheumatoid arthritis 3_58317208 rs73081554 ENSG00000168297.15 PXK -15672 2.77e-07 0.393794 5e-08 rheumatoid arthritis 3_58317208 rs73081554 ENSG00000163684.11 RPP14 10961 1.53e-07 -0.420054 5e-08 rheumatoid arthritis 3_58317208 rs73081554 ENSG00000168297.15 PXK -15672 2.77e-07 0.393794 5e-08 rheumatoid arthritis 3_58317208 rs73081554 ENSG00000163684.11 RPP14 10961 1.53e-07 -0.420054 5e-08 rheumatoid arthritis 3_58317208 rs73081554 ENSG00000168297.15 PXK -15672 2.77e-07 0.393794 1e-08 rheumatoid arthritis 3_58317208 rs73081554 ENSG00000163684.11 RPP14 10961 1.53e-07 -0.420054 1e-08 rheumatoid arthritis 4_112286121 rs17604670 ENSG00000174749.5 FAM241A 140724 0.000103 -0.248202 4e-08 rheumatoid arthritis 4_112286121 rs17604670 ENSG00000145365.10 TIFA 218 1.17e-10 -0.416583 4e-08 rheumatoid arthritis 4_25415622 rs3816587 ENSG00000038210.12 PI4K2B 181647 1.68e-05 -0.130983 9e-06 rheumatoid arthritis 4_25415622 rs3816587 ENSG00000053900.10 ANAPC4 38409 5.85e-12 -0.260609 9e-06 rheumatoid arthritis 4_971932 rs13101828 ENSG00000145214.13 DGKQ -14963 1.2e-20 0.258424 1e-08 rheumatoid arthritis 4_971932 rs13101828 ENSG00000145217.13 SLC26A1 -21508 3.25e-15 -0.463872 1e-08 rheumatoid arthritis 4_971932 rs13101828 ENSG00000127415.12 IDUA -15065 7.86e-14 0.194419 1e-08 rheumatoid arthritis 5_103261019 rs26232 ENSG00000145725.19 PPIP5K2 140867 6.27e-06 -0.115287 4e-08 rheumatoid arthritis 5_103261019 rs26232 ENSG00000175749.11 EIF3KP1 228643 7.12e-09 0.412223 4e-08 rheumatoid arthritis 5_103261019 rs26232 ENSG00000145723.16 GIN1 140871 1.66e-08 0.146463 4e-08 rheumatoid arthritis 5_103261591 rs39984 ENSG00000175749.11 EIF3KP1 229215 7.12e-09 0.412223 9e-08 rheumatoid arthritis 5_103261591 rs39984 ENSG00000145725.19 PPIP5K2 141439 6.27e-06 -0.115287 9e-08 rheumatoid arthritis 5_103261591 rs39984 ENSG00000145723.16 GIN1 141443 1.66e-08 0.146463 9e-08 rheumatoid arthritis 5_103261591 rs39984 ENSG00000175749.11 EIF3KP1 229215 7.12e-09 0.412223 3e-06 rheumatoid arthritis 5_103261591 rs39984 ENSG00000145725.19 PPIP5K2 141439 6.27e-06 -0.115287 3e-06 rheumatoid arthritis 5_103261591 rs39984 ENSG00000145723.16 GIN1 141443 1.66e-08 0.146463 3e-06 rheumatoid arthritis 5_103268000 rs403214 ENSG00000175749.11 EIF3KP1 235624 7.07e-09 0.41461 4e-10 rheumatoid arthritis 5_103268000 rs403214 ENSG00000145725.19 PPIP5K2 147848 9.61e-06 -0.113663 4e-10 rheumatoid arthritis 5_103268000 rs403214 ENSG00000145723.16 GIN1 147852 9.4e-09 0.149698 4e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000175749.11 EIF3KP1 240847 6.73e-10 0.44599 7e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145723.16 GIN1 153075 1.5e-06 0.128001 7e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145725.19 PPIP5K2 153071 2.24e-05 -0.11039 7e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000175749.11 EIF3KP1 240847 6.73e-10 0.44599 1e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145723.16 GIN1 153075 1.5e-06 0.128001 1e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145725.19 PPIP5K2 153071 2.24e-05 -0.11039 1e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000175749.11 EIF3KP1 240847 6.73e-10 0.44599 6e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145723.16 GIN1 153075 1.5e-06 0.128001 6e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145725.19 PPIP5K2 153071 2.24e-05 -0.11039 6e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000175749.11 EIF3KP1 240847 6.73e-10 0.44599 9e-08 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145723.16 GIN1 153075 1.5e-06 0.128001 9e-08 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145725.19 PPIP5K2 153071 2.24e-05 -0.11039 9e-08 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000175749.11 EIF3KP1 240847 6.73e-10 0.44599 2e-11 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145723.16 GIN1 153075 1.5e-06 0.128001 2e-11 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145725.19 PPIP5K2 153071 2.24e-05 -0.11039 2e-11 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000175749.11 EIF3KP1 240847 6.73e-10 0.44599 5e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145723.16 GIN1 153075 1.5e-06 0.128001 5e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145725.19 PPIP5K2 153071 2.24e-05 -0.11039 5e-10 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000175749.11 EIF3KP1 240847 6.73e-10 0.44599 1e-09 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145723.16 GIN1 153075 1.5e-06 0.128001 1e-09 rheumatoid arthritis 5_103273223 rs2561477 ENSG00000145725.19 PPIP5K2 153071 2.24e-05 -0.11039 1e-09 rheumatoid arthritis 5_132094425 rs657075 ENSG00000158987.20 RAPGEF6 459189 4.6e-06 0.357418 3e-10 rheumatoid arthritis 5_132094425 rs657075 ENSG00000158987.20 RAPGEF6 459189 4.6e-06 0.357418 8e-07 rheumatoid arthritis 5_132094425 rs657075 ENSG00000158987.20 RAPGEF6 459189 4.6e-06 0.357418 6e-06 rheumatoid arthritis 5_132094425 rs657075 ENSG00000158987.20 RAPGEF6 459189 4.6e-06 0.357418 8e-06 rheumatoid arthritis 5_132094425 rs657075 ENSG00000158987.20 RAPGEF6 459189 4.6e-06 0.357418 1e-06 rheumatoid arthritis 5_132461855 rs6894249 ENSG00000197536.11 IRF1-AS1 51219 9.6e-07 -0.173105 1e-14 rheumatoid arthritis 5_132461855 rs6894249 ENSG00000125347.13 IRF1 -28943 1.89e-05 -0.145118 1e-14 rheumatoid arthritis 5_150858959 rs147018773 ENSG00000197083.11 ZNF300P1 -87330 5.63e-32 1.1423 2e-09 rheumatoid arthritis 6_167119305 rs3093024 ENSG00000213066.11 CEP43 120123 3.12e-06 -0.173991 8e-19 rheumatoid arthritis 6_167120802 rs3093023 ENSG00000213066.11 CEP43 121620 2.56e-06 0.177627 4e-09 rheumatoid arthritis 6_167120802 rs3093023 ENSG00000213066.11 CEP43 121620 2.56e-06 0.177627 2e-11 rheumatoid arthritis 6_167127354 rs1571878 ENSG00000213066.11 CEP43 128172 7.13e-06 -0.166607 5e-35 rheumatoid arthritis 6_167127354 rs1571878 ENSG00000213066.11 CEP43 128172 7.13e-06 -0.166607 2e-18 rheumatoid arthritis 6_167127354 rs1571878 ENSG00000213066.11 CEP43 128172 7.13e-06 -0.166607 1e-22 rheumatoid arthritis 6_167127354 rs1571878 ENSG00000213066.11 CEP43 128172 7.13e-06 -0.166607 1e-31 rheumatoid arthritis 6_167127354 rs1571878 ENSG00000213066.11 CEP43 128172 7.13e-06 -0.166607 5e-15 rheumatoid arthritis 6_167127354 rs1571878 ENSG00000213066.11 CEP43 128172 7.13e-06 -0.166607 2e-08 rheumatoid arthritis 6_167127354 rs1571878 ENSG00000213066.11 CEP43 128172 7.13e-06 -0.166607 1e-20 rheumatoid arthritis 6_167127354 rs1571878 ENSG00000213066.11 CEP43 128172 7.13e-06 -0.166607 4e-40 rheumatoid arthritis 6_167127354 rs1571878 ENSG00000213066.11 CEP43 128172 7.13e-06 -0.166607 1e-12 rheumatoid arthritis 6_167127354 rs1571878 ENSG00000213066.11 CEP43 128172 7.13e-06 -0.166607 5e-17 rheumatoid arthritis 6_167127770 rs3093017 ENSG00000213066.11 CEP43 128588 7.67e-06 -0.16596 2e-18 rheumatoid arthritis 6_167127770 rs3093017 ENSG00000213066.11 CEP43 128588 7.67e-06 -0.16596 2e-19 rheumatoid arthritis 6_167127770 rs3093017 ENSG00000213066.11 CEP43 128588 7.67e-06 -0.16596 4e-20 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204301.6 NOTCH4 -838515 5.24e-05 -0.192232 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204438.10 GPANK1 -280731 7.75e-06 -0.200055 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204338.8 CYP21A1P -620137 1.08e-06 -0.433732 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000244731.7 C4A -596472 1.33e-12 -0.495643 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204540.10 PSORS1C1 270802 4.94e-17 -0.933136 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204525.16 HLA-C 113447 3.39e-07 0.402498 9e-09 rheumatoid arthritis 6_31654829 rs805297 ENSG00000204435.13 CSNK2B -10562 6.53e-12 -0.201198 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000204338.8 CYP21A1P -350860 1.75e-05 0.245429 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000213676.10 ATF6B -473424 5.23e-13 0.306343 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000137411.16 VARS2 740624 0.000110805 0.224942 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000204525.16 HLA-C 382724 6.88e-06 -0.228133 3e-10 rheumatoid arthritis 6_32315077 rs6910071 ENSG00000237541.3 HLA-DQA2 -426265 1.29e-08 0.524622 1e-299 rheumatoid arthritis 6_32315077 rs6910071 ENSG00000204301.6 NOTCH4 91010 5.41e-06 0.160825 1e-299 rheumatoid arthritis 6_32315077 rs6910071 ENSG00000229391.7 HLA-DRB6 -244945 1.91e-05 0.357531 1e-299 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000229391.7 HLA-DRB6 -151826 3.53e-16 0.619507 2e-124 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000196126.11 HLA-DRB1 -181652 1.37e-05 -0.205639 2e-124 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000240053.8 LY6G5B 738029 0.000110791 -0.109539 2e-124 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000250535.1 STK19B 394926 3e-05 0.316585 2e-124 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000237541.3 HLA-DQA2 -333146 4.93e-24 0.83396 2e-124 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000198502.5 HLA-DRB5 -108759 5.19e-05 -0.283259 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000204338.8 CYP21A1P 415839 9.7e-05 0.203257 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000237541.3 HLA-DQA2 -319814 1.45e-06 0.349175 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000229391.7 HLA-DRB6 -138494 5.67e-10 0.39806 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000213676.10 ATF6B 293275 5.42e-06 0.179962 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000250535.1 STK19B 408258 7.61e-06 0.280245 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000240053.8 LY6G5B 751361 2.4e-07 -0.119943 3e-10 rheumatoid arthritis 6_32446496 rs3129890 ENSG00000244731.7 C4A 464472 6.07e-11 -0.339403 1e-10 rheumatoid arthritis 6_32446496 rs3129890 ENSG00000198502.5 HLA-DRB5 -83791 8.58e-08 -0.470411 1e-10 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000198502.5 HLA-DRB5 -82984 3.32e-08 -0.544752 2e-09 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000204301.6 NOTCH4 223236 9.74e-05 -0.153788 2e-09 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000244731.7 C4A 465279 1.13e-14 -0.444669 2e-09 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 1.82e-07 -0.205357 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 3.21e-39 0.771337 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 2.93e-08 -0.275678 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 7.37e-23 0.682883 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 1.82e-07 -0.205357 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 3.21e-39 0.771337 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 2.93e-08 -0.275678 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 7.37e-23 0.682883 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 1.82e-07 -0.205357 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 3.21e-39 0.771337 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 2.93e-08 -0.275678 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 7.37e-23 0.682883 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 1.82e-07 -0.205357 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 3.21e-39 0.771337 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 2.93e-08 -0.275678 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 7.37e-23 0.682883 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 1.82e-07 -0.205357 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 3.21e-39 0.771337 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 2.93e-08 -0.275678 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 7.37e-23 0.682883 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 1.82e-07 -0.205357 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 3.21e-39 0.771337 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 2.93e-08 -0.275678 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 7.37e-23 0.682883 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 1.82e-07 -0.205357 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 3.21e-39 0.771337 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 2.93e-08 -0.275678 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 7.37e-23 0.682883 3e-07 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000229391.7 HLA-DRB6 -83601 4.87e-39 0.768145 5e-58 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000223534.1 HLA-DQB1-AS1 -183934 3.94e-08 -0.272595 5e-58 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000196126.11 HLA-DRB1 -113427 1.53e-07 -0.206104 5e-58 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000237541.3 HLA-DQA2 -264921 7.06e-23 0.681562 5e-58 rheumatoid arthritis 6_32486159 rs112062732 ENSG00000229391.7 HLA-DRB6 -73863 2.07e-32 0.735504 6e-227 rheumatoid arthritis 6_32486159 rs112062732 ENSG00000196126.11 HLA-DRB1 -103689 2.81e-06 -0.190768 6e-227 rheumatoid arthritis 6_32486159 rs112062732 ENSG00000223534.1 HLA-DQB1-AS1 -174196 3.63e-07 -0.261593 6e-227 rheumatoid arthritis 6_32486159 rs112062732 ENSG00000237541.3 HLA-DQA2 -255183 6.8e-19 0.643396 6e-227 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000237541.3 HLA-DQA2 -207975 7.76e-06 -0.333207 9e-52 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000198502.5 HLA-DRB5 3080 4.15e-28 -0.728616 9e-52 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000244731.7 C4A 551343 4.45e-10 -0.262678 9e-52 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000204310.12 AGPAT1 355271 6.03e-05 0.112231 9e-52 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000204301.6 NOTCH4 309300 2.61e-05 -0.119233 9e-52 rheumatoid arthritis 6_32593593 rs35139284 ENSG00000240053.8 LY6G5B 923426 8.13e-06 -0.110762 4e-287 rheumatoid arthritis 6_32593593 rs35139284 ENSG00000237541.3 HLA-DQA2 -147749 4.19e-09 0.448886 4e-287 rheumatoid arthritis 6_32593593 rs35139284 ENSG00000244731.7 C4A 611569 6.67e-05 0.177289 4e-287 rheumatoid arthritis 6_32593593 rs35139284 ENSG00000229391.7 HLA-DRB6 33571 3.3e-10 0.428722 4e-287 rheumatoid arthritis 6_32606394 rs615672 ENSG00000204310.12 AGPAT1 428298 2.83e-05 0.121267 8e-27 rheumatoid arthritis 6_32606394 rs615672 ENSG00000198502.5 HLA-DRB5 76107 8.4e-14 -0.538631 8e-27 rheumatoid arthritis 6_32606394 rs615672 ENSG00000204301.6 NOTCH4 382327 1.38e-05 -0.127651 8e-27 rheumatoid arthritis 6_32606394 rs615672 ENSG00000244731.7 C4A 624370 1.27e-07 -0.232583 8e-27 rheumatoid arthritis 6_32606394 rs615672 ENSG00000196735.11 HLA-DQA1 -21785 0.000107669 -0.223104 8e-27 rheumatoid arthritis 6_32606394 rs615672 ENSG00000179344.16 HLA-DQB1 -61989 2.2e-07 -0.338717 8e-27 rheumatoid arthritis 6_32606394 rs615672 ENSG00000232629.8 HLA-DQB2 -157140 1.71e-05 0.316205 8e-27 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 5.71e-43 1.0495 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000179344.16 HLA-DQB1 -58780 4.22e-08 -0.401112 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000229391.7 HLA-DRB6 49581 6.57e-13 0.54497 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000240053.8 LY6G5B 939436 1.65e-05 -0.120078 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 5.71e-43 1.0495 2e-08 rheumatoid arthritis 6_32609603 rs660895 ENSG00000179344.16 HLA-DQB1 -58780 4.22e-08 -0.401112 2e-08 rheumatoid arthritis 6_32609603 rs660895 ENSG00000229391.7 HLA-DRB6 49581 6.57e-13 0.54497 2e-08 rheumatoid arthritis 6_32609603 rs660895 ENSG00000240053.8 LY6G5B 939436 1.65e-05 -0.120078 2e-08 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 5.71e-43 1.0495 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000179344.16 HLA-DQB1 -58780 4.22e-08 -0.401112 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000229391.7 HLA-DRB6 49581 6.57e-13 0.54497 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000240053.8 LY6G5B 939436 1.65e-05 -0.120078 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 5.71e-43 1.0495 1e-108 rheumatoid arthritis 6_32609603 rs660895 ENSG00000179344.16 HLA-DQB1 -58780 4.22e-08 -0.401112 1e-108 rheumatoid arthritis 6_32609603 rs660895 ENSG00000229391.7 HLA-DRB6 49581 6.57e-13 0.54497 1e-108 rheumatoid arthritis 6_32609603 rs660895 ENSG00000240053.8 LY6G5B 939436 1.65e-05 -0.120078 1e-108 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000237541.3 HLA-DQA2 -126469 2.19e-43 1.18 2e-10 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000229391.7 HLA-DRB6 54851 2.4e-22 0.799265 2e-10 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000179344.16 HLA-DQB1 -53510 5.21e-07 -0.412954 2e-10 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000237541.3 HLA-DQA2 -126469 2.19e-43 1.18 5e-21 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000229391.7 HLA-DRB6 54851 2.4e-22 0.799265 5e-21 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000179344.16 HLA-DQB1 -53510 5.21e-07 -0.412954 5e-21 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000229391.7 HLA-DRB6 55558 2.4e-22 0.799265 2e-10 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000237541.3 HLA-DQA2 -125762 2.19e-43 1.18 2e-10 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000179344.16 HLA-DQB1 -52803 5.21e-07 -0.412954 2e-10 rheumatoid arthritis 6_32615965 rs9271348 ENSG00000229391.7 HLA-DRB6 55943 8.9e-09 0.407503 5e-07 rheumatoid arthritis 6_32615965 rs9271348 ENSG00000231852.6 CYP21A2 577700 9.71e-07 0.295595 5e-07 rheumatoid arthritis 6_32615965 rs9271348 ENSG00000198502.5 HLA-DRB5 85678 2.64e-29 -0.795031 5e-07 rheumatoid arthritis 6_32615965 rs9271348 ENSG00000213676.10 ATF6B 487712 7.26e-06 0.195186 5e-07 rheumatoid arthritis 6_32615965 rs9271348 ENSG00000240053.8 LY6G5B 945798 4.85e-06 -0.117188 5e-07 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000179344.16 HLA-DQB1 -39138 4.42e-07 -0.414081 3e-11 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000229391.7 HLA-DRB6 69223 2.36e-21 0.779999 3e-11 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000237541.3 HLA-DQA2 -112097 3.09e-44 1.18479 3e-11 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000223534.1 HLA-DQB1-AS1 35719 2.18e-09 -0.283827 1e-09 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000229391.7 HLA-DRB6 136052 5.4e-11 0.407269 1e-09 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000237541.3 HLA-DQA2 -45268 2.94e-13 0.501338 1e-09 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000179344.16 HLA-DQB1 27691 1.89e-05 -0.256963 1e-09 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000213676.10 ATF6B 567821 0.000118737 0.148475 1e-09 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000204338.8 CYP21A1P 690385 4.19e-07 0.253961 1e-09 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000223534.1 HLA-DQB1-AS1 35719 2.18e-09 -0.283827 5e-75 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000229391.7 HLA-DRB6 136052 5.4e-11 0.407269 5e-75 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000237541.3 HLA-DQA2 -45268 2.94e-13 0.501338 5e-75 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000179344.16 HLA-DQB1 27691 1.89e-05 -0.256963 5e-75 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000213676.10 ATF6B 567821 0.000118737 0.148475 5e-75 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000204338.8 CYP21A1P 690385 4.19e-07 0.253961 5e-75 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000237541.3 HLA-DQA2 -45120 2.94e-13 0.501338 4e-186 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000223534.1 HLA-DQB1-AS1 35867 2.18e-09 -0.283827 4e-186 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000179344.16 HLA-DQB1 27839 1.89e-05 -0.256963 4e-186 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000229391.7 HLA-DRB6 136200 5.4e-11 0.407269 4e-186 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000204338.8 CYP21A1P 690533 4.19e-07 0.253961 4e-186 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000213676.10 ATF6B 567969 0.000118737 0.148475 4e-186 rheumatoid arthritis 6_32699330 rs9275334 ENSG00000237541.3 HLA-DQA2 -42012 5.17e-21 1.07067 2e-06 rheumatoid arthritis 6_32699330 rs9275334 ENSG00000229391.7 HLA-DRB6 139308 2.89e-11 0.702263 2e-06 rheumatoid arthritis 6_32699330 rs9275334 ENSG00000179344.16 HLA-DQB1 30947 2.42e-05 -0.431869 2e-06 rheumatoid arthritis 6_32699330 rs9275334 ENSG00000241106.6 HLA-DOB -117718 1.76e-07 0.520493 2e-06 rheumatoid arthritis 6_32702178 rs9275406 ENSG00000244731.7 C4A 720154 1.81e-05 0.187594 3e-12 rheumatoid arthritis 6_32702178 rs9275406 ENSG00000237541.3 HLA-DQA2 -39164 8.91e-05 0.299661 3e-12 rheumatoid arthritis 6_32703201 rs9275428 ENSG00000237541.3 HLA-DQA2 -38141 8.91e-05 0.299661 2e-24 rheumatoid arthritis 6_32703201 rs9275428 ENSG00000244731.7 C4A 721177 1.81e-05 0.187594 2e-24 rheumatoid arthritis 6_32703326 rs13192471 ENSG00000179344.16 HLA-DQB1 34943 4.97e-09 0.48558 2e-58 rheumatoid arthritis 6_32703326 rs13192471 ENSG00000196735.11 HLA-DQA1 75147 8.99e-09 0.417144 2e-58 rheumatoid arthritis 6_32703326 rs13192471 ENSG00000244731.7 C4A 721302 9.09e-06 0.251183 2e-58 rheumatoid arthritis 6_32703326 rs13192471 ENSG00000232629.8 HLA-DQB2 -60208 1.36e-06 -0.452047 2e-58 rheumatoid arthritis 6_32705797 rs9275495 ENSG00000241106.6 HLA-DOB -111251 1.76e-07 0.520493 2e-06 rheumatoid arthritis 6_32705797 rs9275495 ENSG00000179344.16 HLA-DQB1 37414 2.42e-05 -0.431869 2e-06 rheumatoid arthritis 6_32705797 rs9275495 ENSG00000229391.7 HLA-DRB6 145775 2.89e-11 0.702263 2e-06 rheumatoid arthritis 6_32705797 rs9275495 ENSG00000237541.3 HLA-DQA2 -35545 5.17e-21 1.07067 2e-06 rheumatoid arthritis 6_32707746 rs9275530 ENSG00000241106.6 HLA-DOB -109302 1.76e-07 0.520493 2e-06 rheumatoid arthritis 6_32707746 rs9275530 ENSG00000229391.7 HLA-DRB6 147724 2.89e-11 0.702263 2e-06 rheumatoid arthritis 6_32707746 rs9275530 ENSG00000179344.16 HLA-DQB1 39363 2.42e-05 -0.431869 2e-06 rheumatoid arthritis 6_32707746 rs9275530 ENSG00000237541.3 HLA-DQA2 -33596 5.17e-21 1.07067 2e-06 rheumatoid arthritis 6_32707857 rs9275532 ENSG00000237541.3 HLA-DQA2 -33485 5.17e-21 1.07067 5e-06 rheumatoid arthritis 6_32707857 rs9275532 ENSG00000241106.6 HLA-DOB -109191 1.76e-07 0.520493 5e-06 rheumatoid arthritis 6_32707857 rs9275532 ENSG00000229391.7 HLA-DRB6 147835 2.89e-11 0.702263 5e-06 rheumatoid arthritis 6_32707857 rs9275532 ENSG00000179344.16 HLA-DQB1 39474 2.42e-05 -0.431869 5e-06 rheumatoid arthritis 6_32713151 rs7765379 ENSG00000237541.3 HLA-DQA2 -28191 2.78e-10 0.739258 5e-23 rheumatoid arthritis 6_32713151 rs7765379 ENSG00000179344.16 HLA-DQB1 44768 5.42e-06 -0.460165 5e-23 rheumatoid arthritis 6_32713706 rs7454108 ENSG00000229391.7 HLA-DRB6 153684 2.89e-11 0.702263 2e-06 rheumatoid arthritis 6_32713706 rs7454108 ENSG00000241106.6 HLA-DOB -103342 1.76e-07 0.520493 2e-06 rheumatoid arthritis 6_32713706 rs7454108 ENSG00000237541.3 HLA-DQA2 -27636 5.17e-21 1.07067 2e-06 rheumatoid arthritis 6_32713706 rs7454108 ENSG00000179344.16 HLA-DQB1 45323 2.42e-05 -0.431869 2e-06 rheumatoid arthritis 6_32713753 rs3957146 ENSG00000229391.7 HLA-DRB6 153731 2.89e-11 0.702263 1e-06 rheumatoid arthritis 6_32713753 rs3957146 ENSG00000241106.6 HLA-DOB -103295 1.76e-07 0.520493 1e-06 rheumatoid arthritis 6_32713753 rs3957146 ENSG00000237541.3 HLA-DQA2 -27589 5.17e-21 1.07067 1e-06 rheumatoid arthritis 6_32713753 rs3957146 ENSG00000179344.16 HLA-DQB1 45370 2.42e-05 -0.431869 1e-06 rheumatoid arthritis 6_32714242 rs3998159 ENSG00000237541.3 HLA-DQA2 -27100 5.17e-21 1.07067 2e-06 rheumatoid arthritis 6_32714242 rs3998159 ENSG00000179344.16 HLA-DQB1 45859 2.42e-05 -0.431869 2e-06 rheumatoid arthritis 6_32714242 rs3998159 ENSG00000241106.6 HLA-DOB -102806 1.76e-07 0.520493 2e-06 rheumatoid arthritis 6_32714242 rs3998159 ENSG00000229391.7 HLA-DRB6 154220 2.89e-11 0.702263 2e-06 rheumatoid arthritis 6_44277504 rs1044690 ENSG00000178233.17 TMEM151B 7038 2.28e-10 0.455548 9e-10 rheumatoid arthritis 6_90267049 rs72928038 ENSG00000118412.12 CASP8AP2 437155 3.41e-05 -0.154646 8e-07 rheumatoid arthritis 6_90267049 rs72928038 ENSG00000118412.12 CASP8AP2 437155 3.41e-05 -0.154646 4e-11 rheumatoid arthritis 6_90267049 rs72928038 ENSG00000118412.12 CASP8AP2 437155 3.41e-05 -0.154646 2e-08 rheumatoid arthritis 7_128932712 rs4731532 ENSG00000128604.19 IRF5 -4900 9.68e-11 0.218258 1e-07 rheumatoid arthritis 7_128932712 rs4731532 ENSG00000238072.1 CDC26P1 -477658 4.03e-05 -0.2819 1e-07 rheumatoid arthritis 7_128933913 rs4728142 ENSG00000128604.19 IRF5 -3699 1.14e-09 0.212455 5e-12 rheumatoid arthritis 7_128933913 rs4728142 ENSG00000128604.19 IRF5 -3699 1.14e-09 0.212455 7e-10 rheumatoid arthritis 7_128936032 rs3757387 ENSG00000128604.19 IRF5 -1580 5.67e-10 0.212259 2e-19 rheumatoid arthritis 7_128936032 rs3757387 ENSG00000128604.19 IRF5 -1580 5.67e-10 0.212259 5e-09 rheumatoid arthritis 7_128939988 rs3778753 ENSG00000128604.19 IRF5 2376 1.89e-09 0.200494 4e-12 rheumatoid arthritis 7_128939988 rs3778753 ENSG00000128604.19 IRF5 2376 1.89e-09 0.200494 3e-14 rheumatoid arthritis 7_128940626 rs3807306 ENSG00000128604.19 IRF5 3014 2.18e-09 0.201494 5e-10 rheumatoid arthritis 7_128940626 rs3807306 ENSG00000128604.19 IRF5 3014 2.18e-09 0.201494 7e-10 rheumatoid arthritis 7_128940626 rs3807306 ENSG00000128604.19 IRF5 3014 2.18e-09 0.201494 3e-07 rheumatoid arthritis 7_128949579 rs10954214 ENSG00000128604.19 IRF5 11967 2.61e-06 0.160101 7e-17 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000153814.11 JAZF1 -45376 3.45e-05 -0.122685 2e-06 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000234336.6 JAZF1-AS1 -44955 1.97e-05 -0.328605 2e-06 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000153814.11 JAZF1 -45376 3.45e-05 -0.122685 3e-09 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000234336.6 JAZF1-AS1 -44955 1.97e-05 -0.328605 3e-09 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000153814.11 JAZF1 -45376 3.45e-05 -0.122685 6e-06 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000234336.6 JAZF1-AS1 -44955 1.97e-05 -0.328605 6e-06 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000153814.11 JAZF1 -45376 3.45e-05 -0.122685 4e-09 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000234336.6 JAZF1-AS1 -44955 1.97e-05 -0.328605 4e-09 rheumatoid arthritis 7_92607515 rs4272 ENSG00000157259.6 GATAD1 160062 6.5e-05 -0.16867 5e-09 rheumatoid arthritis 7_92607515 rs4272 ENSG00000157259.6 GATAD1 160062 6.5e-05 -0.16867 3e-07 rheumatoid arthritis 7_92607515 rs4272 ENSG00000157259.6 GATAD1 160062 6.5e-05 -0.16867 1e-08 rheumatoid arthritis 7_92607515 rs4272 ENSG00000157259.6 GATAD1 160062 6.5e-05 -0.16867 5e-07 rheumatoid arthritis 7_92609830 rs42034 ENSG00000157259.6 GATAD1 162377 8.23e-05 -0.158885 1e-08 rheumatoid arthritis 7_92617430 rs42041 ENSG00000157259.6 GATAD1 169977 0.000123884 -0.158697 4e-06 rheumatoid arthritis 8_11502129 rs1600249 ENSG00000227888.4 FAM66A -859890 1.54e-05 0.347854 5e-06 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000226752.9 CUTALP 49015 3.09e-18 -0.581111 2e-08 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000095261.13 PSMD5 30859 0.000110548 -0.177461 2e-08 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000226752.9 CUTALP 49015 3.09e-18 -0.581111 4e-09 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000095261.13 PSMD5 30859 0.000110548 -0.177461 4e-09 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000226752.9 CUTALP 49015 3.09e-18 -0.581111 5e-11 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000095261.13 PSMD5 30859 0.000110548 -0.177461 5e-11 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000226752.9 CUTALP 49015 3.09e-18 -0.581111 3e-09 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000095261.13 30859 0.000110548 -0.177461 3e-09 rheumatoid arthritis 9_120889023 rs2072438 ENSG00000095261.13 46039 5.4e-05 -0.186811 3e-09 rheumatoid arthritis 9_120889023 rs2072438 ENSG00000226752.9 CUTALP 64195 2.27e-19 -0.603602 3e-09 rheumatoid arthritis 9_120890620 rs881375 ENSG00000056558.10 TRAF1 -38553 2.02e-08 0.205346 4e-08 rheumatoid arthritis 9_120890620 rs881375 ENSG00000095261.13 PSMD5 47636 9.9e-06 -0.211277 4e-08 rheumatoid arthritis 9_120890620 rs881375 ENSG00000226752.9 CUTALP 65792 2.91e-19 -0.623605 4e-08 rheumatoid arthritis 9_120900340 rs10760126 ENSG00000226752.9 CUTALP 75512 3.71e-20 -0.612754 4e-12 rheumatoid arthritis 9_120900340 rs10760126 ENSG00000095261.13 PSMD5 57356 2.27e-05 -0.194995 4e-12 rheumatoid arthritis 9_120905921 rs10435844 ENSG00000056558.10 TRAF1 -23252 1.54e-08 0.206373 1e-10 rheumatoid arthritis 9_120905921 rs10435844 ENSG00000226752.9 CUTALP 81093 7.59e-20 -0.630639 1e-10 rheumatoid arthritis 9_120905921 rs10435844 ENSG00000095261.13 PSMD5 62937 5.21e-06 -0.216949 1e-10 rheumatoid arthritis 9_120921291 rs2269060 ENSG00000226752.9 CUTALP 96463 1.14e-17 -0.562497 4e-07 rheumatoid arthritis 9_120921291 rs2269060 ENSG00000226752.9 CUTALP 96463 1.14e-17 -0.562497 2e-08 rheumatoid arthritis 9_120927961 rs3761847 ENSG00000226752.9 CUTALP 103133 9.94e-18 -0.560856 4e-14 rheumatoid arthritis 9_120927961 rs3761847 ENSG00000226752.9 CUTALP 103133 9.94e-18 -0.560856 2e-07 rheumatoid arthritis 9_120933004 rs10739580 ENSG00000056558.10 TRAF1 3831 2.59e-10 0.228922 2e-06 rheumatoid arthritis 9_120933004 rs10739580 ENSG00000226752.9 CUTALP 108176 5.2e-20 -0.632402 2e-06 rheumatoid arthritis 9_120933004 rs10739580 ENSG00000095261.13 PSMD5 90020 3.28e-06 -0.221126 2e-06 rheumatoid arthritis 9_120944104 rs2900180 ENSG00000095261.13 PSMD5 101120 3.28e-06 -0.221126 6e-09 rheumatoid arthritis 9_120944104 rs2900180 ENSG00000056558.10 TRAF1 14931 2.59e-10 0.228922 6e-09 rheumatoid arthritis 9_120944104 rs2900180 ENSG00000226752.9 CUTALP 119276 5.2e-20 -0.632402 6e-09 rheumatoid arthritis 9_136378050 rs3812565 ENSG00000213221.4 DNLZ 14261 2.81e-05 -0.230268 2e-09 rheumatoid arthritis 9_136378050 rs3812565 ENSG00000160360.12 GPSM1 50574 7.89e-07 -0.186515 2e-09 rheumatoid arthritis 9_136395373 rs4266763 ENSG00000160360.12 GPSM1 67897 1.36e-06 -0.182224 1e-13 rheumatoid arthritis X_153982797 rs13397 ENSG00000177854.7 TMEM187 10470 6.06e-21 -0.469418 3e-12 rheumatoid arthritis X_153982797 rs13397 ENSG00000177854.7 TMEM187 10470 6.06e-21 -0.469418 1e-12 rheumatoid arthritis X_154018741 rs1059702 ENSG00000177854.7 TMEM187 46414 7.91e-21 0.469883 5e-10 rheumatoid arthritis X_154036016 rs5987194 ENSG00000177854.7 TMEM187 63689 8.99e-20 0.442663 4e-22 rheumatoid arthritis X_154036016 rs5987194 ENSG00000177854.7 TMEM187 63689 8.99e-20 0.442663 5e-16 rheumatoid arthritis X_154036016 rs5987194 ENSG00000177854.7 TMEM187 63689 8.99e-20 0.442663 3e-12