DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	1.59e-08	-0.617161	5e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	2.77e-08	-0.573754	5e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	1.59e-08	-0.617161	1e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	2.77e-08	-0.573754	1e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	1.59e-08	-0.617161	1e-06
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	2.77e-08	-0.573754	1e-06
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	1.59e-08	-0.617161	2e-06
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	2.77e-08	-0.573754	2e-06
rheumatoid arthritis	1_161505960	rs10494360	ENSG00000244682.7	FCGR2C	-75379	7.15e-08	-0.630321	3e-07
rheumatoid arthritis	1_161505960	rs10494360	ENSG00000225217.1	HSPA7	-100331	7.39e-08	-0.666716	3e-07
rheumatoid arthritis	1_17087404	rs761426	ENSG00000058453.16	CROCC	165454	8.67e-06	0.254274	2e-10
rheumatoid arthritis	1_17087404	rs761426	ENSG00000117118.9	SDHB	33234	4.05e-05	-0.167698	2e-10
rheumatoid arthritis	1_17087404	rs761426	ENSG00000058453.16	CROCC	165454	8.67e-06	0.254274	1e-06
rheumatoid arthritis	1_17087404	rs761426	ENSG00000117118.9	SDHB	33234	4.05e-05	-0.167698	1e-06
rheumatoid arthritis	1_19845021	rs10737481	ENSG00000169914.5	OTUD3	-37492	3.29e-05	0.226823	3e-19
rheumatoid arthritis	1_2552522	rs2258734	ENSG00000142606.15	MMEL1	-80468	1.97e-05	-0.327856	6e-14
rheumatoid arthritis	1_2569783	rs10797431	ENSG00000142606.15	MMEL1	-63207	1.87e-05	-0.328712	1e-08
rheumatoid arthritis	1_2603539	rs6664969	ENSG00000142606.15	MMEL1	-29451	1.44e-05	-0.336794	1e-08
rheumatoid arthritis	1_2608357	rs4073285	ENSG00000142606.15	MMEL1	-24633	1.48e-05	-0.348642	2e-13
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	1.58e-05	-0.341174	1e-07
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	1.58e-05	-0.341174	2e-08
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	1.58e-05	-0.341174	4e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	1.58e-05	-0.341174	1e-06
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	7.77e-10	0.432163	6e-12
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	7.77e-10	0.432163	6e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	7.77e-10	0.432163	3e-12
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	7.77e-10	0.432163	2e-11
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	7.77e-10	0.432163	5e-09
rheumatoid arthritis	11_609888	rs12421158	ENSG00000177042.14	TMEM80	-85645	1.92e-07	0.365303	4e-06
rheumatoid arthritis	11_633689	rs7929541	ENSG00000177042.14	TMEM80	-61844	4.41e-08	0.369626	2e-10
rheumatoid arthritis	12_48021974	rs4760609	ENSG00000167528.12	ZNF641	-329440	4.09e-07	0.356497	3e-12
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.07e-40	0.8271	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.07e-40	0.8271	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.07e-40	0.8271	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.07e-40	0.8271	1e-09
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	2.46e-09	0.188483	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	1.79e-08	-0.358657	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	2.46e-09	0.188483	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	1.79e-08	-0.358657	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	2.46e-09	0.188483	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	1.79e-08	-0.358657	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	2.46e-09	0.188483	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	1.79e-08	-0.358657	9e-08
rheumatoid arthritis	13_39760715	rs9603612	ENSG00000133103.16	COG6	105088	7.91e-06	-0.175154	3e-13
rheumatoid arthritis	13_39776775	rs7993214	ENSG00000133103.16	COG6	121148	1.07e-05	0.166622	5e-06
rheumatoid arthritis	13_39781776	rs9532434	ENSG00000133103.16	COG6	126149	3.73e-07	0.187861	2e-19
rheumatoid arthritis	13_39793932	rs9603616	ENSG00000133103.16	COG6	138305	4.84e-06	-0.174047	3e-11
rheumatoid arthritis	13_39793932	rs9603616	ENSG00000133103.16	COG6	138305	4.84e-06	-0.174047	2e-12
rheumatoid arthritis	13_39793932	rs9603616	ENSG00000133103.16	COG6	138305	4.84e-06	-0.174047	8e-11
rheumatoid arthritis	13_39793932	rs9603616	ENSG00000133103.16	COG6	138305	4.84e-06	-0.174047	2e-12
rheumatoid arthritis	13_39797240	rs9603618	ENSG00000133103.16	COG6	141613	2.72e-06	-0.202092	5e-09
rheumatoid arthritis	14_104924668	rs2841277	ENSG00000140104.13	CLBA1	-61107	2.49e-07	0.309047	2e-14
rheumatoid arthritis	14_104924668	rs2841277	ENSG00000258701.1	LINC00638	103467	1.53e-05	-0.269371	2e-14
rheumatoid arthritis	15_90350436	rs6496667	ENSG00000140575.12	IQGAP1	-37782	5.67e-07	0.240876	1e-06
rheumatoid arthritis	15_90483245	rs8040585	ENSG00000140575.12	IQGAP1	95027	1.42e-07	0.210506	2e-08
rheumatoid arthritis	16_1491460	rs2745106	ENSG00000100726.14	TELO2	-1884	1.31e-09	-0.459584	2e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000103510.19	KAT8	-500459	2.21e-08	0.337758	3e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000103549.21	RNF40	-147823	4.41e-06	0.19755	3e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000099377.13	HSD3B7	-372976	1.9e-06	0.299098	3e-08
rheumatoid arthritis	17_39583908	rs1877030	ENSG00000125686.11	MED1	132622	7.24e-05	-0.196973	2e-08
rheumatoid arthritis	17_39583908	rs1877030	ENSG00000125686.11	MED1	132622	7.24e-05	-0.196973	1e-08
rheumatoid arthritis	17_39877024	rs1054609	ENSG00000167914.11	GSDMA	-76239	6.07e-10	0.492181	6e-07
rheumatoid arthritis	17_39884510	rs2872507	ENSG00000167914.11	GSDMA	-68753	2.73e-09	0.474654	3e-09
rheumatoid arthritis	17_39884510	rs2872507	ENSG00000167914.11	GSDMA	-68753	2.73e-09	0.474654	9e-07
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000161395.13	PGAP3	190599	6.42e-05	-0.215794	7e-07
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000167914.11	GSDMA	-65867	4.25e-09	0.488758	7e-07
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000161395.13	PGAP3	190599	6.42e-05	-0.215794	4e-07
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000167914.11	GSDMA	-65867	4.25e-09	0.488758	4e-07
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000161395.13	PGAP3	190599	6.42e-05	-0.215794	1e-10
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000167914.11	GSDMA	-65867	4.25e-09	0.488758	1e-10
rheumatoid arthritis	17_39905943	rs2305480	ENSG00000167914.11	GSDMA	-47320	1.06e-08	0.480196	4e-09
rheumatoid arthritis	19_10351837	rs11085725	ENSG00000105397.13	TYK2	-28839	5.04e-11	0.40974	3e-10
rheumatoid arthritis	19_10359299	rs12720356	ENSG00000105397.13	TYK2	-21377	6.14e-05	0.448421	4e-09
rheumatoid arthritis	2_190700031	rs744600	ENSG00000198130.15	HIBCH	379986	2.61e-08	0.336377	7e-11
rheumatoid arthritis	2_201196097	rs3731714	ENSG00000064012.21	CASP8	-37346	1.08e-05	0.276899	7e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	9.56e-13	-0.842925	3e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	9.56e-13	-0.842925	5e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	9.56e-13	-0.842925	2e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	9.56e-13	-0.842925	3e-07
rheumatoid arthritis	2_60841032	rs1432296	ENSG00000162927.13	PUS10	-177129	9.61e-07	0.388713	8e-10
rheumatoid arthritis	2_60841032	rs1432296	ENSG00000237651.6	C2orf74	-304036	1.24e-05	-0.482457	8e-10
rheumatoid arthritis	2_65329190	rs6546146	ENSG00000204929.12	LINC02934	-107521	4.1e-06	0.389414	8e-07
rheumatoid arthritis	2_65353087	rs11126034	ENSG00000204929.12	LINC02934	-83624	1.8e-05	0.369708	3e-09
rheumatoid arthritis	2_65370537	rs11673987	ENSG00000204929.12	LINC02934	-66174	7.67e-06	0.384519	3e-08
rheumatoid arthritis	2_65371107	rs1858036	ENSG00000204929.12	LINC02934	-65604	7.67e-06	0.384519	7e-10
rheumatoid arthritis	2_65371166	rs1858037	ENSG00000204929.12	LINC02934	-65545	7.67e-06	0.384519	2e-09
rheumatoid arthritis	2_65371166	rs1858037	ENSG00000204929.12	LINC02934	-65545	7.67e-06	0.384519	6e-10
rheumatoid arthritis	2_65371166	rs1858037	ENSG00000204929.12	LINC02934	-65545	7.67e-06	0.384519	1e-08
rheumatoid arthritis	2_65371166	rs1858037	ENSG00000204929.12	LINC02934	-65545	7.67e-06	0.384519	8e-14
rheumatoid arthritis	2_65371166	rs1858037	ENSG00000204929.12	LINC02934	-65545	7.67e-06	0.384519	3e-15
rheumatoid arthritis	2_65371166	rs1858037	ENSG00000204929.12	LINC02934	-65545	7.67e-06	0.384519	1e-14
rheumatoid arthritis	2_65371166	rs1858037	ENSG00000204929.12	LINC02934	-65545	7.67e-06	0.384519	7e-07
rheumatoid arthritis	20_46105671	rs6032662	ENSG00000101017.13	CD40	-12601	1.52e-07	0.324568	1e-09
rheumatoid arthritis	20_46118343	rs1883832	ENSG00000101017.13	CD40	71	6.87e-07	0.310562	2e-13
rheumatoid arthritis	20_46118343	rs1883832	ENSG00000101017.13	CD40	71	6.87e-07	0.310562	1e-16
rheumatoid arthritis	20_46118343	rs1883832	ENSG00000101017.13	CD40	71	6.87e-07	0.310562	9e-15
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	6.87e-07	0.310562	9e-11
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	6.87e-07	0.310562	2e-07
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	6.87e-07	0.310562	3e-09
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	6.87e-07	0.310562	8e-09
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	4.49e-08	0.322808	1e-16
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	4.49e-08	0.322808	4e-18
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	4.49e-08	0.322808	3e-14
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	4.49e-08	0.322808	4e-14
rheumatoid arthritis	21_44283361	rs111469885	ENSG00000160213.6	CSTB	506916	9.99e-06	0.441538	3e-08
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.91e-05	-0.43813	4e-06
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.91e-05	-0.43813	2e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.91e-05	-0.43813	6e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.91e-05	-0.43813	2e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.91e-05	-0.43813	1e-09
rheumatoid arthritis	22_39353976	rs5757628	ENSG00000100321.14	SYNGR1	4051	3.38e-05	-0.213943	8e-10
rheumatoid arthritis	22_39360645	rs2049985	ENSG00000100321.14	SYNGR1	10720	1.38e-05	-0.222927	4e-09
rheumatoid arthritis	3_160712081	rs7624766	ENSG00000163590.13	PPM1L	-43521	6.59e-06	0.205073	4e-07
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000068745.14	IP6K2	919673	6.73e-05	-0.194766	6e-06
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000068745.14	IP6K2	934511	0.000171565	-0.183013	5e-07
rheumatoid arthritis	4_25415622	rs3816587	ENSG00000053900.10	ANAPC4	38409	5.65e-08	-0.230859	9e-06
rheumatoid arthritis	4_25415622	rs3816587	ENSG00000168228.14	ZCCHC4	102837	5.33e-07	-0.25527	9e-06
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145217.13	SLC26A1	-21508	3.35e-05	-0.260901	1e-08
rheumatoid arthritis	4_971932	rs13101828	ENSG00000174227.15	PIGG	472722	7.28e-05	0.242365	1e-08
rheumatoid arthritis	4_971932	rs13101828	ENSG00000127415.12	IDUA	-15065	4.21e-11	0.275209	1e-08
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145214.13	DGKQ	-14963	4.2e-06	0.223621	1e-08
rheumatoid arthritis	5_103261019	rs26232	ENSG00000175749.11	EIF3KP1	228643	5.57e-10	0.563026	4e-08
rheumatoid arthritis	5_103261591	rs39984	ENSG00000175749.11	EIF3KP1	229215	1.94e-10	0.577424	9e-08
rheumatoid arthritis	5_103261591	rs39984	ENSG00000175749.11	EIF3KP1	229215	1.94e-10	0.577424	3e-06
rheumatoid arthritis	5_103268000	rs403214	ENSG00000175749.11	EIF3KP1	235624	1.98e-10	0.579156	4e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	5.34e-11	0.595266	1e-09
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	5.34e-11	0.595266	9e-08
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	5.34e-11	0.595266	6e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	5.34e-11	0.595266	2e-11
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	5.34e-11	0.595266	5e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	5.34e-11	0.595266	1e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	5.34e-11	0.595266	7e-10
rheumatoid arthritis	5_150858959	rs147018773	ENSG00000197083.11	ZNF300P1	-87330	9.41e-16	1.04933	2e-09
rheumatoid arthritis	5_150858959	rs147018773	ENSG00000145908.12	ZNF300	-46024	1.45e-05	0.41703	2e-09
rheumatoid arthritis	6_159052542	rs212400	ENSG00000164691.16	TAGAP	7390	1.51e-05	0.378267	6e-11
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204540.10	PSORS1C1	270802	2.51e-05	-0.619469	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204308.7	RNF5	-792802	4.99e-08	-0.399774	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000250535.1	STK19B	-627718	2.77e-06	-0.399186	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204338.8	CYP21A1P	-620137	1.8e-10	-0.573603	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204525.16	HLA-C	113447	1.99e-07	0.692917	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000244731.7	C4A	-596472	1.41e-09	-0.579687	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000248290.1	TNXA	-626920	5.73e-05	-0.57242	9e-09
rheumatoid arthritis	6_31654829	rs805297	ENSG00000224389.8	C4B	-359933	5.12e-07	-0.290433	3e-10
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204338.8	CYP21A1P	-350860	3.51e-11	0.364076	3e-10
rheumatoid arthritis	6_31654829	rs805297	ENSG00000213676.10	ATF6B	-473424	1.78e-09	0.309644	3e-10
rheumatoid arthritis	6_32315077	rs6910071	ENSG00000237541.3	HLA-DQA2	-426265	9.38e-06	0.517176	1e-299
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000232629.8	HLA-DQB2	-355338	6.65e-05	0.483855	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000229391.7	HLA-DRB6	-151826	1.16e-08	0.678017	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000237541.3	HLA-DQA2	-333146	4.67e-20	1.0309	2e-124
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000204338.8	CYP21A1P	415839	6.53e-06	0.252432	3e-10
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000244731.7	C4A	439504	2.55e-05	0.250511	3e-10
rheumatoid arthritis	6_32446496	rs3129890	ENSG00000244731.7	C4A	464472	3.01e-05	-0.293748	1e-10
rheumatoid arthritis	6_32446496	rs3129890	ENSG00000204338.8	CYP21A1P	440807	6.1e-05	-0.266923	1e-10
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000204338.8	CYP21A1P	441614	1.02e-05	-0.318696	2e-09
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	4.63e-14	0.713437	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	3.28e-14	0.711358	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	4.63e-14	0.713437	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	3.28e-14	0.711358	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	4.63e-14	0.713437	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	3.28e-14	0.711358	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	4.63e-14	0.713437	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	3.28e-14	0.711358	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	4.63e-14	0.713437	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	3.28e-14	0.711358	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	4.63e-14	0.713437	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	3.28e-14	0.711358	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	4.63e-14	0.713437	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	3.28e-14	0.711358	2e-145
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000237541.3	HLA-DQA2	-264921	4.63e-14	0.713437	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000229391.7	HLA-DRB6	-83601	3.28e-14	0.711358	5e-58
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000237541.3	HLA-DQA2	-255183	1.13e-11	0.671573	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000244731.7	C4A	504135	6.13e-06	0.275765	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000229391.7	HLA-DRB6	-73863	8.73e-12	0.669429	6e-227
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000198502.5	HLA-DRB5	3080	5.7e-14	-0.678091	9e-52
rheumatoid arthritis	6_32593593	rs35139284	ENSG00000225914.1	TSBP1-AS1	337882	1.74e-05	0.447053	4e-287
rheumatoid arthritis	6_32593593	rs35139284	ENSG00000229391.7	HLA-DRB6	33571	7.7e-05	0.409925	4e-287
rheumatoid arthritis	6_32593593	rs35139284	ENSG00000237541.3	HLA-DQA2	-147749	6.46e-05	0.4174	4e-287
rheumatoid arthritis	6_32606394	rs615672	ENSG00000198502.5	HLA-DRB5	76107	2.27e-07	-0.527495	8e-27
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	9.37e-25	1.06757	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	4.46e-07	0.573831	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000241106.6	HLA-DOB	-207445	3.69e-05	0.443641	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	4.95e-07	0.571966	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	9.37e-25	1.06757	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	4.46e-07	0.573831	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000241106.6	HLA-DOB	-207445	3.69e-05	0.443641	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	4.95e-07	0.571966	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	9.37e-25	1.06757	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	4.46e-07	0.573831	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000241106.6	HLA-DOB	-207445	3.69e-05	0.443641	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	4.95e-07	0.571966	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	9.37e-25	1.06757	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	4.46e-07	0.573831	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000241106.6	HLA-DOB	-207445	3.69e-05	0.443641	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	4.95e-07	0.571966	1e-300
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	4.56e-11	0.825969	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	5.62e-27	1.24598	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000241106.6	HLA-DOB	-202175	3.51e-06	0.559451	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000232629.8	HLA-DQB2	-148661	3.99e-06	0.594611	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	4.56e-11	0.825969	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	5.62e-27	1.24598	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000241106.6	HLA-DOB	-202175	3.51e-06	0.559451	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000232629.8	HLA-DQB2	-148661	3.99e-06	0.594611	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000232629.8	HLA-DQB2	-147954	3.99e-06	0.594611	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000241106.6	HLA-DOB	-201468	3.51e-06	0.559451	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000237541.3	HLA-DQA2	-125762	5.62e-27	1.24598	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000229391.7	HLA-DRB6	55558	4.56e-11	0.825969	2e-10
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000229391.7	HLA-DRB6	55943	6.25e-05	0.442174	5e-07
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000204314.10	PRRT1	462005	6.02e-05	0.234631	5e-07
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000198502.5	HLA-DRB5	85678	2.95e-11	-0.672925	5e-07
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000229391.7	HLA-DRB6	69223	4.56e-11	0.825969	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000237541.3	HLA-DQA2	-112097	5.62e-27	1.24598	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000232629.8	HLA-DQB2	-134289	3.99e-06	0.594611	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000241106.6	HLA-DOB	-187803	3.51e-06	0.559451	3e-11
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000223534.1	HLA-DQB1-AS1	35719	7.86e-05	-0.291709	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000204338.8	CYP21A1P	690385	8.61e-08	0.283427	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	1.39e-06	0.456496	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000223534.1	HLA-DQB1-AS1	35719	7.86e-05	-0.291709	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000204338.8	CYP21A1P	690385	8.61e-08	0.283427	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	1.39e-06	0.456496	1e-09
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000223534.1	HLA-DQB1-AS1	35867	7.86e-05	-0.291709	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000237541.3	HLA-DQA2	-45120	1.39e-06	0.456496	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000204338.8	CYP21A1P	690533	8.61e-08	0.283427	4e-186
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000241106.6	HLA-DOB	-117718	2.47e-09	0.866842	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000229391.7	HLA-DRB6	139308	1.38e-08	0.885916	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000237541.3	HLA-DQA2	-42012	4.41e-15	1.18956	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000237541.3	HLA-DQA2	-35545	4.41e-15	1.18956	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000241106.6	HLA-DOB	-111251	2.47e-09	0.866842	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000229391.7	HLA-DRB6	145775	1.38e-08	0.885916	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000237541.3	HLA-DQA2	-33596	4.41e-15	1.18956	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000241106.6	HLA-DOB	-109302	2.47e-09	0.866842	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000229391.7	HLA-DRB6	147724	1.38e-08	0.885916	2e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000237541.3	HLA-DQA2	-33485	4.41e-15	1.18956	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000229391.7	HLA-DRB6	147835	1.38e-08	0.885916	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000241106.6	HLA-DOB	-109191	2.47e-09	0.866842	5e-06
rheumatoid arthritis	6_32713151	rs7765379	ENSG00000237541.3	HLA-DQA2	-28191	1.71e-05	0.692065	5e-23
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000229391.7	HLA-DRB6	153684	1.38e-08	0.885916	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000237541.3	HLA-DQA2	-27636	4.41e-15	1.18956	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000241106.6	HLA-DOB	-103342	2.47e-09	0.866842	2e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000241106.6	HLA-DOB	-103295	2.47e-09	0.866842	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000237541.3	HLA-DQA2	-27589	4.41e-15	1.18956	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000229391.7	HLA-DRB6	153731	1.38e-08	0.885916	1e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000229391.7	HLA-DRB6	154220	1.61e-08	0.871809	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000237541.3	HLA-DQA2	-27100	1.26e-14	1.15891	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000241106.6	HLA-DOB	-102806	2.43e-09	0.857166	2e-06
rheumatoid arthritis	6_36387877	rs2234067	ENSG00000010030.13	ETV7	77	1.24e-06	0.468658	2e-09
rheumatoid arthritis	6_36387877	rs2234067	ENSG00000010030.13	ETV7	77	1.24e-06	0.468658	4e-08
rheumatoid arthritis	6_44277504	rs1044690	ENSG00000146221.9	TCTE1	-20184	1.06e-05	0.414066	9e-10
rheumatoid arthritis	7_128932712	rs4731532	ENSG00000128604.19	IRF5	-4900	5.06e-18	0.366356	1e-07
rheumatoid arthritis	7_128933913	rs4728142	ENSG00000128604.19	IRF5	-3699	1.57e-15	0.347356	7e-10
rheumatoid arthritis	7_128933913	rs4728142	ENSG00000128604.19	IRF5	-3699	1.57e-15	0.347356	5e-12
rheumatoid arthritis	7_128936032	rs3757387	ENSG00000128604.19	IRF5	-1580	4.39e-15	0.333972	2e-19
rheumatoid arthritis	7_128936032	rs3757387	ENSG00000128604.19	IRF5	-1580	4.39e-15	0.333972	5e-09
rheumatoid arthritis	7_128939988	rs3778753	ENSG00000128604.19	IRF5	2376	1.88e-14	0.324735	3e-14
rheumatoid arthritis	7_128939988	rs3778753	ENSG00000128604.19	IRF5	2376	1.88e-14	0.324735	4e-12
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	3.34e-14	0.319542	5e-10
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	3.34e-14	0.319542	3e-07
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	3.34e-14	0.319542	7e-10
rheumatoid arthritis	7_128949579	rs10954214	ENSG00000128604.19	IRF5	11967	1.29e-10	0.290537	7e-17
rheumatoid arthritis	7_92609830	rs42034	ENSG00000157259.6	GATAD1	162377	8.39e-05	-0.251033	1e-08
rheumatoid arthritis	7_92617430	rs42041	ENSG00000157259.6	GATAD1	169977	6.45e-05	-0.252544	4e-06
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	7.32e-11	-0.476858	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000095261.13	PSMD5	30859	8.41e-07	-0.242898	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	7.32e-11	-0.476858	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000095261.13	PSMD5	30859	8.41e-07	-0.242898	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	7.32e-11	-0.476858	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000095261.13	PSMD5	30859	8.41e-07	-0.242898	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	7.32e-11	-0.476858	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000095261.13	PSMD5	30859	8.41e-07	-0.242898	3e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000095261.13	PSMD5	46039	2.93e-07	-0.251484	3e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000226752.9	CUTALP	64195	8.09e-12	-0.496369	3e-09
rheumatoid arthritis	9_120890620	rs881375	ENSG00000226752.9	CUTALP	65792	1.06e-11	-0.538326	4e-08
rheumatoid arthritis	9_120890620	rs881375	ENSG00000095261.13	PSMD5	47636	4.81e-09	-0.309798	4e-08
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000095261.13	PSMD5	57356	7.98e-08	-0.266131	4e-12
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000226752.9	CUTALP	75512	7.35e-13	-0.525071	4e-12
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000095261.13	PSMD5	62937	4.67e-09	-0.311415	1e-10
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000226752.9	CUTALP	81093	3.65e-12	-0.551403	1e-10
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000095261.13	PSMD5	78307	5.11e-08	-0.264737	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	2.34e-11	-0.484102	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000095261.13	PSMD5	78307	5.11e-08	-0.264737	4e-07
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	2.34e-11	-0.484102	4e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	2.34e-11	-0.484102	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000095261.13	PSMD5	84977	5.11e-08	-0.264737	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	2.34e-11	-0.484102	4e-14
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000095261.13	PSMD5	84977	5.11e-08	-0.264737	4e-14
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000226752.9	CUTALP	108176	1.78e-11	-0.529373	2e-06
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000095261.13	PSMD5	90020	1.86e-08	-0.296582	2e-06
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000226752.9	CUTALP	119276	2.13e-11	-0.532225	6e-09
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000095261.13	PSMD5	101120	2.5e-08	-0.296689	6e-09
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	2.29e-06	-0.242533	3e-12
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	2.29e-06	-0.242533	1e-12
rheumatoid arthritis	X_154018741	rs1059702	ENSG00000177854.7	TMEM187	46414	1.28e-06	0.24538	5e-10
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	4.93e-06	0.226516	4e-22
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	4.93e-06	0.226516	5e-16
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	4.93e-06	0.226516	3e-12