DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
rheumatoid arthritis	1_157699488	rs3761959	ENSG00000160856.20	FCRL3	-1369	5.77e-09	0.35427	1e-08
rheumatoid arthritis	1_157699488	rs3761959	ENSG00000160856.20	FCRL3	-1369	5.77e-09	0.35427	1e-10
rheumatoid arthritis	1_157705207	rs2317230	ENSG00000160856.20	FCRL3	4350	4.21e-07	0.321078	1e-08
rheumatoid arthritis	1_157705207	rs2317230	ENSG00000160856.20	FCRL3	4350	4.21e-07	0.321078	2e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	1.04e-06	-0.472953	2e-06
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	1.04e-06	-0.472953	1e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	1.04e-06	-0.472953	5e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	1.04e-06	-0.472953	1e-06
rheumatoid arthritis	1_161505960	rs10494360	ENSG00000244682.7	FCGR2C	-75379	1.63e-06	-0.481219	3e-07
rheumatoid arthritis	1_17087404	rs761426	ENSG00000117115.12	PADI2	-32031	4.64e-07	-0.475667	2e-10
rheumatoid arthritis	1_17087404	rs761426	ENSG00000117115.12	PADI2	-32031	4.64e-07	-0.475667	1e-06
rheumatoid arthritis	1_17103279	rs2235909	ENSG00000117115.12	PADI2	-16156	1.76e-06	-0.40911	2e-09
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	3.61e-08	0.403903	9e-13
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	3.61e-08	0.403903	8e-13
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	3.61e-08	0.403903	6e-19
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	3.61e-08	0.403903	6e-09
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	3.61e-08	0.403903	4e-26
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	3.61e-08	0.403903	5e-21
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	3.61e-08	0.403903	6e-09
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	3.61e-08	0.403903	1e-18
rheumatoid arthritis	1_17347613	rs2240339	ENSG00000159339.13	PADI4	39418	8.87e-08	0.386666	1e-10
rheumatoid arthritis	1_17347613	rs2240339	ENSG00000159339.13	PADI4	39418	8.87e-08	0.386666	3e-10
rheumatoid arthritis	1_17348042	rs2240335	ENSG00000159339.13	PADI4	39847	8.87e-08	0.386666	2e-08
rheumatoid arthritis	1_17348042	rs2240335	ENSG00000159339.13	PADI4	39847	8.87e-08	0.386666	2e-08
rheumatoid arthritis	1_2552522	rs2258734	ENSG00000157873.17	TNFRSF14	-4175	1.05e-05	0.17685	6e-14
rheumatoid arthritis	1_2552522	rs2258734	ENSG00000142606.15	MMEL1	-80468	8.67e-14	-0.632335	6e-14
rheumatoid arthritis	1_2569783	rs10797431	ENSG00000142606.15	MMEL1	-63207	2.32e-14	-0.651939	1e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000157873.17	TNFRSF14	39997	8.71e-06	-0.178379	4e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000142606.15	MMEL1	-36296	7.31e-14	0.63386	4e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000157873.17	TNFRSF14	39997	8.71e-06	-0.178379	7e-10
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000142606.15	MMEL1	-36296	7.31e-14	0.63386	7e-10
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000157873.17	TNFRSF14	39997	8.71e-06	-0.178379	7e-12
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000142606.15	MMEL1	-36296	7.31e-14	0.63386	7e-12
rheumatoid arthritis	1_2603539	rs6664969	ENSG00000142606.15	MMEL1	-29451	2.59e-15	-0.666295	1e-08
rheumatoid arthritis	1_2603539	rs6664969	ENSG00000157873.17	TNFRSF14	46842	4.33e-06	0.184615	1e-08
rheumatoid arthritis	1_2608357	rs4073285	ENSG00000142606.15	MMEL1	-24633	2.77e-15	-0.674903	2e-13
rheumatoid arthritis	1_2608357	rs4073285	ENSG00000157873.17	TNFRSF14	51660	5.67e-06	0.185015	2e-13
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	3.23e-14	-0.655516	2e-08
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157873.17	TNFRSF14	65488	3.07e-06	0.190715	2e-08
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	3.23e-14	-0.655516	4e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157873.17	TNFRSF14	65488	3.07e-06	0.190715	4e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	3.23e-14	-0.655516	1e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157873.17	TNFRSF14	65488	3.07e-06	0.190715	1e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	3.23e-14	-0.655516	1e-07
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157873.17	TNFRSF14	65488	3.07e-06	0.190715	1e-07
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	4.6e-09	0.359864	3e-12
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	4.6e-09	0.359864	2e-11
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	4.6e-09	0.359864	6e-12
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	4.6e-09	0.359864	6e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	4.6e-09	0.359864	5e-09
rheumatoid arthritis	11_118741072	rs10892279	ENSG00000118094.11	TREH	61399	8.23e-12	-0.584731	1e-10
rheumatoid arthritis	11_118741072	rs10892279	ENSG00000118094.11	TREH	61399	8.23e-12	-0.584731	3e-08
rheumatoid arthritis	11_118806377	rs11217037	ENSG00000118094.11	TREH	126704	7.37e-14	-0.670659	1e-12
rheumatoid arthritis	11_118809939	rs11217040	ENSG00000118094.11	TREH	130266	4.02e-13	-0.629295	2e-11
rheumatoid arthritis	11_118858682	rs10790268	ENSG00000118094.11	TREH	179009	1.13e-09	0.541999	1e-13
rheumatoid arthritis	11_118858682	rs10790268	ENSG00000118094.11	TREH	179009	1.13e-09	0.541999	3e-15
rheumatoid arthritis	11_118858682	rs10790268	ENSG00000118094.11	TREH	179009	1.13e-09	0.541999	1e-17
rheumatoid arthritis	11_118858682	rs10790268	ENSG00000118094.11	TREH	179009	1.13e-09	0.541999	1e-15
rheumatoid arthritis	11_118871133	rs4938573	ENSG00000118094.11	TREH	191460	4.99e-09	0.52306	5e-07
rheumatoid arthritis	11_61822009	rs28456	ENSG00000221968.8	FADS3	-70042	6.55e-08	-0.413374	4e-06
rheumatoid arthritis	11_61822009	rs28456	ENSG00000149485.18	FADS1	-7309	1.01e-06	-0.415775	4e-06
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	7.85e-08	-0.209612	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	3.61e-29	0.795551	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	7.85e-08	-0.209612	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	3.61e-29	0.795551	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	7.85e-08	-0.209612	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	3.61e-29	0.795551	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	7.85e-08	-0.209612	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	3.61e-29	0.795551	1e-09
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	3.62e-07	0.241	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	3.62e-07	0.241	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	3.62e-07	0.241	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	3.62e-07	0.241	7e-08
rheumatoid arthritis	14_104924668	rs2841277	ENSG00000140104.13	CLBA1	-61107	1.17e-05	0.253418	2e-14
rheumatoid arthritis	15_90350436	rs6496667	ENSG00000140575.12	IQGAP1	-37782	1.23e-13	0.325439	1e-06
rheumatoid arthritis	15_90483245	rs8040585	ENSG00000140575.12	IQGAP1	95027	3.23e-08	0.208097	2e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000167395.10	ZNF646	-459127	3.13e-05	0.252854	3e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000167397.14	VKORC1	-480685	3.48e-05	0.381613	3e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000103549.21	RNF40	-147823	2.58e-05	0.15984	3e-08
rheumatoid arthritis	17_39583908	rs1877030	ENSG00000161395.13	PGAP3	-112889	3.29e-07	-0.253832	2e-08
rheumatoid arthritis	17_39583908	rs1877030	ENSG00000161395.13	PGAP3	-112889	3.29e-07	-0.253832	1e-08
rheumatoid arthritis	17_78232490	rs11868709	ENSG00000089685.14	BIRC5	18304	6.42e-06	-0.347922	7e-11
rheumatoid arthritis	18_12881362	rs8083786	ENSG00000260302.1	LINC01882	105439	1.33e-05	0.52226	2e-15
rheumatoid arthritis	18_12881362	rs8083786	ENSG00000260302.1	LINC01882	105439	1.33e-05	0.52226	8e-09
rheumatoid arthritis	18_12881362	rs8083786	ENSG00000260302.1	LINC01882	105439	1.33e-05	0.52226	1e-07
rheumatoid arthritis	18_12881362	rs8083786	ENSG00000260302.1	LINC01882	105439	1.33e-05	0.52226	6e-18
rheumatoid arthritis	18_12881362	rs8083786	ENSG00000260302.1	LINC01882	105439	1.33e-05	0.52226	2e-11
rheumatoid arthritis	18_12881362	rs8083786	ENSG00000260302.1	LINC01882	105439	1.33e-05	0.52226	2e-10
rheumatoid arthritis	2_201196097	rs3731714	ENSG00000240344.8	PPIL3	306794	2.12e-06	0.389791	7e-09
rheumatoid arthritis	2_233275771	rs3792109	ENSG00000085978.21	ATG16L1	65720	6.19e-06	0.23835	2e-16
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.79e-09	0.488127	2e-13
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.79e-09	0.488127	6e-12
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.79e-09	0.488127	8e-11
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.79e-09	0.488127	7e-12
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.79e-09	0.488127	8e-11
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.79e-09	0.488127	1e-08
rheumatoid arthritis	4_25415622	rs3816587	ENSG00000053900.10	ANAPC4	38409	1.69e-14	-0.442131	9e-06
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145214.13	DGKQ	-14963	9.1e-07	0.261579	1e-08
rheumatoid arthritis	5_150858959	rs147018773	ENSG00000197083.11	ZNF300P1	-87330	1.63e-18	1.20737	2e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000244731.7	C4A	-596472	4.36e-16	-0.657784	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000250535.1	STK19B	-627718	2.67e-08	-0.617127	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204308.7	RNF5	-792802	2.63e-05	-0.354124	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000137411.16	VARS2	471347	3.6e-05	-0.4826	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204525.16	HLA-C	113447	9.29e-06	0.589887	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204338.8	CYP21A1P	-620137	3.09e-09	-0.655806	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204516.9	MICB	-109329	7.75e-06	0.529879	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000248290.1	TNXA	-626920	9.82e-09	-0.758563	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204536.13	CCHCR1	227314	4.77e-05	0.412802	9e-09
rheumatoid arthritis	6_31654829	rs805297	ENSG00000213676.10	ATF6B	-473424	1.48e-06	0.269443	3e-10
rheumatoid arthritis	6_32315077	rs6910071	ENSG00000237541.3	HLA-DQA2	-426265	1.15e-05	0.552245	1e-299
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000232629.8	HLA-DQB2	-355338	1.26e-05	0.510327	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000237541.3	HLA-DQA2	-333146	3.76e-15	0.90946	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000204469.12	PRRC2A	787476	5.03e-05	0.194651	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000229391.7	HLA-DRB6	-151826	1.09e-09	0.703218	2e-124
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000237541.3	HLA-DQA2	-319814	1.82e-05	0.429393	3e-10
rheumatoid arthritis	6_32446496	rs3129890	ENSG00000198502.5	HLA-DRB5	-83791	4.05e-06	-0.457938	1e-10
rheumatoid arthritis	6_32446496	rs3129890	ENSG00000244731.7	C4A	464472	1.15e-07	-0.330775	1e-10
rheumatoid arthritis	6_32446496	rs3129890	ENSG00000204257.14	HLA-DMA	-522598	3.65e-08	0.458416	1e-10
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000204257.14	HLA-DMA	-521791	5.9e-09	0.587221	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000198502.5	HLA-DRB5	-82984	2.04e-05	-0.518217	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000244731.7	C4A	465279	2.38e-11	-0.495904	2e-09
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.11e-16	0.716699	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	4.79e-05	-0.334965	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.03e-12	0.655909	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.11e-16	0.716699	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	4.79e-05	-0.334965	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.03e-12	0.655909	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.11e-16	0.716699	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	4.79e-05	-0.334965	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.03e-12	0.655909	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.11e-16	0.716699	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	4.79e-05	-0.334965	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.03e-12	0.655909	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.11e-16	0.716699	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	4.79e-05	-0.334965	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.03e-12	0.655909	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.11e-16	0.716699	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	4.79e-05	-0.334965	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.03e-12	0.655909	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.11e-16	0.716699	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	4.79e-05	-0.334965	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.03e-12	0.655909	1e-100
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000237541.3	HLA-DQA2	-264921	2.36e-12	0.642342	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000229391.7	HLA-DRB6	-83601	4.23e-16	0.700493	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000223534.1	HLA-DQB1-AS1	-183934	4.95e-05	-0.332046	5e-58
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000237541.3	HLA-DQA2	-255183	1.36e-10	0.607334	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000229391.7	HLA-DRB6	-73863	2.9e-14	0.676498	6e-227
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000204257.14	HLA-DMA	-435727	2.73e-05	0.301049	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000237541.3	HLA-DQA2	-207975	3.21e-05	-0.395384	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000198502.5	HLA-DRB5	3080	2.98e-17	-0.661393	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000244731.7	C4A	551343	1.15e-06	-0.258434	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000204310.12	AGPAT1	355271	8.83e-07	0.299612	9e-52
rheumatoid arthritis	6_32593593	rs35139284	ENSG00000237541.3	HLA-DQA2	-147749	1.22e-05	0.437117	4e-287
rheumatoid arthritis	6_32606394	rs615672	ENSG00000204257.14	HLA-DMA	-362700	4.78e-06	0.334122	8e-27
rheumatoid arthritis	6_32606394	rs615672	ENSG00000179344.16	HLA-DQB1	-61989	3.8e-06	-0.34037	8e-27
rheumatoid arthritis	6_32606394	rs615672	ENSG00000244731.7	C4A	624370	7.91e-10	-0.327337	8e-27
rheumatoid arthritis	6_32606394	rs615672	ENSG00000204310.12	AGPAT1	428298	7.36e-06	0.281138	8e-27
rheumatoid arthritis	6_32606394	rs615672	ENSG00000198502.5	HLA-DRB5	76107	5.78e-11	-0.545964	8e-27
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	2.1e-09	0.670852	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	2.63e-25	1.09379	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.13e-06	0.547474	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	2.1e-09	0.670852	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	2.63e-25	1.09379	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.13e-06	0.547474	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	2.1e-09	0.670852	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	2.63e-25	1.09379	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.13e-06	0.547474	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	2.1e-09	0.670852	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	2.63e-25	1.09379	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.13e-06	0.547474	1e-108
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	1.92e-12	0.818523	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	2.44e-28	1.20749	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000232629.8	HLA-DQB2	-148661	1.18e-05	0.525109	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	1.92e-12	0.818523	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	2.44e-28	1.20749	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000232629.8	HLA-DQB2	-148661	1.18e-05	0.525109	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000232629.8	HLA-DQB2	-147954	1.18e-05	0.525109	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000229391.7	HLA-DRB6	55558	1.92e-12	0.818523	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000237541.3	HLA-DQA2	-125762	2.44e-28	1.20749	2e-10
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000248290.1	TNXA	603493	1.29e-05	-0.411701	5e-07
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000198502.5	HLA-DRB5	85678	8.02e-20	-0.794306	5e-07
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000229391.7	HLA-DRB6	69223	1.92e-12	0.818523	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000232629.8	HLA-DQB2	-134289	1.18e-05	0.525109	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000237541.3	HLA-DQA2	-112097	2.44e-28	1.20749	3e-11
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	2.52e-06	0.452785	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000223534.1	HLA-DQB1-AS1	35719	1.01e-07	-0.432426	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	2.52e-06	0.452785	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000223534.1	HLA-DQB1-AS1	35719	1.01e-07	-0.432426	1e-09
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000237541.3	HLA-DQA2	-45120	2.52e-06	0.452785	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000223534.1	HLA-DQB1-AS1	35867	1.01e-07	-0.432426	4e-186
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000229391.7	HLA-DRB6	139308	6.92e-07	0.760277	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000241106.6	HLA-DOB	-117718	5.78e-06	0.701129	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000237541.3	HLA-DQA2	-42012	1.27e-14	1.16655	2e-06
rheumatoid arthritis	6_32702178	rs9275406	ENSG00000204310.12	AGPAT1	524082	3.05e-05	-0.289755	3e-12
rheumatoid arthritis	6_32703201	rs9275428	ENSG00000204310.12	AGPAT1	525105	2.98e-05	-0.29204	2e-24
rheumatoid arthritis	6_32703326	rs13192471	ENSG00000232629.8	HLA-DQB2	-60208	2.37e-06	-0.615368	2e-58
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000241106.6	HLA-DOB	-111251	5.78e-06	0.701129	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000229391.7	HLA-DRB6	145775	6.92e-07	0.760277	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000237541.3	HLA-DQA2	-35545	1.27e-14	1.16655	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000229391.7	HLA-DRB6	147724	6.92e-07	0.760277	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000241106.6	HLA-DOB	-109302	5.78e-06	0.701129	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000237541.3	HLA-DQA2	-33596	1.27e-14	1.16655	2e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000237541.3	HLA-DQA2	-33485	1.27e-14	1.16655	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000229391.7	HLA-DRB6	147835	6.92e-07	0.760277	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000241106.6	HLA-DOB	-109191	5.78e-06	0.701129	5e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000241106.6	HLA-DOB	-103342	5.78e-06	0.701129	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000237541.3	HLA-DQA2	-27636	1.27e-14	1.16655	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000229391.7	HLA-DRB6	153684	6.92e-07	0.760277	2e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000241106.6	HLA-DOB	-103295	5.78e-06	0.701129	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000229391.7	HLA-DRB6	153731	6.92e-07	0.760277	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000237541.3	HLA-DQA2	-27589	1.27e-14	1.16655	1e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000237541.3	HLA-DQA2	-27100	1.27e-14	1.16655	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000229391.7	HLA-DRB6	154220	6.92e-07	0.760277	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000241106.6	HLA-DOB	-102806	5.78e-06	0.701129	2e-06
rheumatoid arthritis	7_128932712	rs4731532	ENSG00000128604.19	IRF5	-4900	1.57e-09	0.378384	1e-07
rheumatoid arthritis	7_128933913	rs4728142	ENSG00000128604.19	IRF5	-3699	1.94e-13	0.490802	7e-10
rheumatoid arthritis	7_128933913	rs4728142	ENSG00000128604.19	IRF5	-3699	1.94e-13	0.490802	5e-12
rheumatoid arthritis	7_128936032	rs3757387	ENSG00000128604.19	IRF5	-1580	5.11e-15	0.503292	5e-09
rheumatoid arthritis	7_128936032	rs3757387	ENSG00000128604.19	IRF5	-1580	5.11e-15	0.503292	2e-19
rheumatoid arthritis	7_128939988	rs3778753	ENSG00000128604.19	IRF5	2376	3.13e-13	0.468881	3e-14
rheumatoid arthritis	7_128939988	rs3778753	ENSG00000128604.19	IRF5	2376	3.13e-13	0.468881	4e-12
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	1.57e-12	0.462405	5e-10
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	1.57e-12	0.462405	7e-10
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	1.57e-12	0.462405	3e-07
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000153814.11	JAZF1	-45376	2.18e-09	-0.575677	2e-06
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000153814.11	JAZF1	-45376	2.18e-09	-0.575677	4e-09
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000153814.11	JAZF1	-45376	2.18e-09	-0.575677	6e-06
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000153814.11	JAZF1	-45376	2.18e-09	-0.575677	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	5.84e-07	-0.39347	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000095261.13	PSMD5	30859	4.83e-06	-0.327737	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	5.84e-07	-0.39347	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000095261.13	PSMD5	30859	4.83e-06	-0.327737	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	5.84e-07	-0.39347	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000095261.13	PSMD5	30859	4.83e-06	-0.327737	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	5.84e-07	-0.39347	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000095261.13	PSMD5	30859	4.83e-06	-0.327737	5e-11
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000226752.9	CUTALP	64195	4.07e-07	-0.40402	3e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000095261.13	PSMD5	46039	2.25e-06	-0.342991	3e-09
rheumatoid arthritis	9_120890620	rs881375	ENSG00000056558.10	TRAF1	-38553	3.75e-06	0.217433	4e-08
rheumatoid arthritis	9_120890620	rs881375	ENSG00000226752.9	CUTALP	65792	2.04e-07	-0.407065	4e-08
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000095261.13	PSMD5	57356	1.09e-06	-0.352466	4e-12
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000226752.9	CUTALP	75512	3e-07	-0.40791	4e-12
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000056558.10	TRAF1	-23252	1.03e-06	0.229017	1e-10
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000095261.13	PSMD5	62937	5.43e-05	-0.290904	1e-10
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000226752.9	CUTALP	81093	1.43e-07	-0.412169	1e-10
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	5.49e-07	-0.385394	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000095261.13	PSMD5	78307	5.24e-06	-0.319184	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	5.49e-07	-0.385394	4e-07
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000095261.13	PSMD5	78307	5.24e-06	-0.319184	4e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000095261.13	PSMD5	84977	4.87e-06	-0.315806	4e-14
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	3.73e-07	-0.385317	4e-14
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000095261.13	PSMD5	84977	4.87e-06	-0.315806	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	3.73e-07	-0.385317	2e-07
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000056558.10	TRAF1	3831	2.43e-07	0.239764	2e-06
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000226752.9	CUTALP	108176	6.76e-08	-0.419594	2e-06
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000095261.13	PSMD5	90020	2.88e-05	-0.299271	2e-06
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000056558.10	TRAF1	14931	3.59e-07	0.236838	6e-09
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000226752.9	CUTALP	119276	6.16e-08	-0.421246	6e-09
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000095261.13	PSMD5	101120	3.21e-05	-0.297915	6e-09
rheumatoid arthritis	9_136378050	rs3812565	ENSG00000165688.11	PMPCA	-32560	1.48e-09	0.3952	2e-09
rheumatoid arthritis	9_136378050	rs3812565	ENSG00000148396.18	SEC16A	-99639	5.16e-07	-0.181148	2e-09
rheumatoid arthritis	9_136395373	rs4266763	ENSG00000148396.18	SEC16A	-82316	9.49e-06	-0.157653	1e-13
rheumatoid arthritis	9_136395373	rs4266763	ENSG00000165688.11	PMPCA	-15237	7.53e-11	0.412908	1e-13