DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	3.51e-06	-0.507613	5e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	1.54e-07	-0.564579	5e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	3.51e-06	-0.507613	1e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	1.54e-07	-0.564579	1e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	3.51e-06	-0.507613	1e-06
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	1.54e-07	-0.564579	1e-06
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	3.51e-06	-0.507613	2e-06
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	1.54e-07	-0.564579	2e-06
rheumatoid arthritis	1_161505960	rs10494360	ENSG00000225217.1	HSPA7	-100331	2.88e-07	-0.568338	3e-07
rheumatoid arthritis	1_161505960	rs10494360	ENSG00000244682.7	FCGR2C	-75379	9.95e-08	-0.583319	3e-07
rheumatoid arthritis	1_2552522	rs2258734	ENSG00000215912.12	TTC34	-249195	1.02e-05	0.207936	6e-14
rheumatoid arthritis	1_2569783	rs10797431	ENSG00000215912.12	TTC34	-231934	5.61e-06	0.209889	1e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000215912.12	TTC34	-205023	4.39e-07	-0.236549	7e-12
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000215912.12	TTC34	-205023	4.39e-07	-0.236549	4e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000215912.12	TTC34	-205023	4.39e-07	-0.236549	7e-10
rheumatoid arthritis	1_2603539	rs6664969	ENSG00000215912.12	TTC34	-198178	2.18e-07	0.240215	1e-08
rheumatoid arthritis	1_2608357	rs4073285	ENSG00000215912.12	TTC34	-193360	4.78e-08	0.255675	2e-13
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	2.37e-08	0.258851	4e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	2.37e-08	0.258851	1e-07
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	2.37e-08	0.258851	2e-08
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	2.37e-08	0.258851	1e-06
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	1.83e-10	0.290279	6e-12
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	1.83e-10	0.290279	5e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	1.83e-10	0.290279	2e-11
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	1.83e-10	0.290279	6e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	1.83e-10	0.290279	3e-12
rheumatoid arthritis	11_609888	rs12421158	ENSG00000069696.6	DRD4	-27405	3.69e-05	-0.209849	4e-06
rheumatoid arthritis	11_609888	rs12421158	ENSG00000177042.14	TMEM80	-85645	1.23e-08	0.400333	4e-06
rheumatoid arthritis	11_61138978	rs508970	ENSG00000110448.10	CD5	36583	8.47e-06	-0.270415	3e-06
rheumatoid arthritis	11_61138978	rs508970	ENSG00000110448.10	CD5	36583	8.47e-06	-0.270415	4e-06
rheumatoid arthritis	11_61142109	rs595158	ENSG00000110448.10	CD5	39714	1.96e-05	-0.246574	6e-06
rheumatoid arthritis	11_61142109	rs595158	ENSG00000110448.10	CD5	39714	1.96e-05	-0.246574	3e-08
rheumatoid arthritis	11_61142109	rs595158	ENSG00000110448.10	CD5	39714	1.96e-05	-0.246574	6e-06
rheumatoid arthritis	11_61822009	rs28456	ENSG00000149485.18	FADS1	-7309	1.4e-05	-0.268581	4e-06
rheumatoid arthritis	11_633689	rs7929541	ENSG00000069696.6	DRD4	-3604	5.01e-06	-0.230727	2e-10
rheumatoid arthritis	11_633689	rs7929541	ENSG00000177042.14	TMEM80	-61844	6.62e-15	0.527089	2e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.48e-38	1.01977	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	2.15e-18	-0.38911	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.48e-38	1.01977	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	2.15e-18	-0.38911	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.48e-38	1.01977	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	2.15e-18	-0.38911	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.48e-38	1.01977	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	2.15e-18	-0.38911	9e-08
rheumatoid arthritis	15_90350436	rs6496667	ENSG00000140575.12	IQGAP1	-37782	3.02e-13	0.354228	1e-06
rheumatoid arthritis	15_90483245	rs8040585	ENSG00000140575.12	IQGAP1	95027	8.01e-11	0.303603	2e-08
rheumatoid arthritis	16_23877519	rs7404928	ENSG00000166501.12	PRKCB	41518	7.11e-06	0.198062	4e-06
rheumatoid arthritis	17_39877024	rs1054609	ENSG00000067191.15	CACNB1	679321	6.69e-06	0.319529	6e-07
rheumatoid arthritis	17_39884510	rs2872507	ENSG00000067191.15	CACNB1	686807	8.83e-06	0.314999	3e-09
rheumatoid arthritis	17_39884510	rs2872507	ENSG00000067191.15	CACNB1	686807	8.83e-06	0.314999	9e-07
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000067191.15	CACNB1	689693	1.21e-05	0.323433	7e-07
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000067191.15	CACNB1	689693	1.21e-05	0.323433	1e-10
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000067191.15	CACNB1	689693	1.21e-05	0.323433	4e-07
rheumatoid arthritis	17_39905943	rs2305480	ENSG00000067191.15	CACNB1	708240	6.84e-06	0.32932	4e-09
rheumatoid arthritis	17_5369285	rs72634030	ENSG00000167842.15	MIS12	-117000	1.08e-06	-0.525866	7e-08
rheumatoid arthritis	17_5369285	rs72634030	ENSG00000167842.15	MIS12	-117000	1.08e-06	-0.525866	2e-09
rheumatoid arthritis	19_10359299	rs12720356	ENSG00000220201.7	ZGLP1	49419	1.48e-05	-0.216833	4e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	3.63e-09	-0.626079	3e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	3.63e-09	-0.626079	3e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	3.63e-09	-0.626079	2e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	3.63e-09	-0.626079	5e-07
rheumatoid arthritis	21_33391982	rs73194058	ENSG00000142188.16	TMEM50B	-88029	3.27e-07	-0.649335	1e-06
rheumatoid arthritis	21_33391982	rs73194058	ENSG00000142188.16	TMEM50B	-88029	3.27e-07	-0.649335	7e-08
rheumatoid arthritis	21_33391982	rs73194058	ENSG00000142188.16	TMEM50B	-88029	3.27e-07	-0.649335	8e-07
rheumatoid arthritis	21_33391982	rs73194058	ENSG00000142188.16	TMEM50B	-88029	3.27e-07	-0.649335	3e-08
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.53e-11	0.401504	6e-12
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.53e-11	0.401504	8e-11
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.53e-11	0.401504	7e-12
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.53e-11	0.401504	8e-11
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.53e-11	0.401504	2e-13
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	3.53e-11	0.401504	1e-08
rheumatoid arthritis	22_19750832	rs1005133	ENSG00000184058.12	TBX1	-5871	7.09e-11	0.669169	4e-08
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000004534.14	RBM6	-279981	8.97e-08	0.294273	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000145029.13	NICN1	230700	7.5e-05	0.175256	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000173531.15	MST1	-29472	7.02e-05	0.154376	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000173540.12	GMPPB	-63925	8.01e-05	-0.176498	6e-06
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000173540.12	GMPPB	-49087	8.56e-05	-0.179293	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000004534.14	RBM6	-265143	2.42e-07	0.290602	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000173531.15	MST1	-14634	6.3e-05	0.158408	5e-07
rheumatoid arthritis	4_25415622	rs3816587	ENSG00000053900.10	ANAPC4	38409	1.14e-14	-0.428765	9e-06
rheumatoid arthritis	4_25415622	rs3816587	ENSG00000038210.12	PI4K2B	181647	1.83e-05	-0.222076	9e-06
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145214.13	DGKQ	-14963	4.38e-12	0.360692	1e-08
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145217.13	SLC26A1	-21508	3.2e-15	-0.617556	1e-08
rheumatoid arthritis	5_103261019	rs26232	ENSG00000175749.11	EIF3KP1	228643	9.98e-09	0.583956	4e-08
rheumatoid arthritis	5_103261591	rs39984	ENSG00000175749.11	EIF3KP1	229215	9.98e-09	0.583956	3e-06
rheumatoid arthritis	5_103261591	rs39984	ENSG00000175749.11	EIF3KP1	229215	9.98e-09	0.583956	9e-08
rheumatoid arthritis	5_103268000	rs403214	ENSG00000175749.11	EIF3KP1	235624	8.89e-09	0.592594	4e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	5.16e-10	0.647603	6e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	5.16e-10	0.647603	7e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	5.16e-10	0.647603	2e-11
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	5.16e-10	0.647603	1e-09
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	5.16e-10	0.647603	1e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	5.16e-10	0.647603	5e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	5.16e-10	0.647603	9e-08
rheumatoid arthritis	5_150858959	rs147018773	ENSG00000197083.11	ZNF300P1	-87330	2.24e-14	1.01456	2e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204540.10	PSORS1C1	270802	1.27e-05	-0.761971	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000137312.14	FLOT1	642819	9.53e-07	0.380483	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000146112.11	PPP1R18	697657	2.79e-05	-0.25697	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000244731.7	C4A	-596472	1.02e-07	-0.581388	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204525.16	HLA-C	113447	1.97e-05	0.647647	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204338.8	CYP21A1P	-620137	1.56e-05	-0.59032	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204536.13	CCHCR1	227314	4.86e-06	0.393912	9e-09
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204428.12	LY6G5C	-29211	2.74e-05	0.303454	3e-10
rheumatoid arthritis	6_31654829	rs805297	ENSG00000213676.10	ATF6B	-473424	6.19e-05	0.191187	3e-10
rheumatoid arthritis	6_32315077	rs6910071	ENSG00000237541.3	HLA-DQA2	-426265	2.08e-11	0.794964	1e-299
rheumatoid arthritis	6_32315077	rs6910071	ENSG00000229391.7	HLA-DRB6	-244945	4.04e-06	0.534028	1e-299
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000196126.11	HLA-DRB1	-181652	5.97e-08	-0.355859	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000237541.3	HLA-DQA2	-333146	4.48e-19	0.943362	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000229391.7	HLA-DRB6	-151826	3.25e-12	0.725437	2e-124
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000198502.5	HLA-DRB5	-108759	2.38e-06	-0.409203	3e-10
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000198502.5	HLA-DRB5	-82984	2.33e-05	-0.47396	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000244731.7	C4A	465279	8.33e-07	-0.369545	2e-09
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	8.36e-06	-0.293696	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	2.04e-14	0.696762	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	7.86e-23	0.807009	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	8.36e-06	-0.293696	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	2.04e-14	0.696762	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	7.86e-23	0.807009	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	8.36e-06	-0.293696	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	2.04e-14	0.696762	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	7.86e-23	0.807009	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	8.36e-06	-0.293696	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	2.04e-14	0.696762	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	7.86e-23	0.807009	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	8.36e-06	-0.293696	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	2.04e-14	0.696762	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	7.86e-23	0.807009	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	8.36e-06	-0.293696	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	2.04e-14	0.696762	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	7.86e-23	0.807009	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	8.36e-06	-0.293696	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	2.04e-14	0.696762	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	7.86e-23	0.807009	3e-07
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000237541.3	HLA-DQA2	-264921	2.04e-14	0.696762	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000229391.7	HLA-DRB6	-83601	7.86e-23	0.807009	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000223534.1	HLA-DQB1-AS1	-183934	8.36e-06	-0.293696	5e-58
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000223534.1	HLA-DQB1-AS1	-174196	1.58e-05	-0.295526	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000237541.3	HLA-DQA2	-255183	5.78e-12	0.65998	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000229391.7	HLA-DRB6	-73863	2.46e-18	0.762659	6e-227
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000198502.5	HLA-DRB5	3080	2.15e-20	-0.716254	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000237541.3	HLA-DQA2	-207975	3.32e-05	-0.397927	9e-52
rheumatoid arthritis	6_32606394	rs615672	ENSG00000198502.5	HLA-DRB5	76107	5.14e-13	-0.577996	8e-27
rheumatoid arthritis	6_32606394	rs615672	ENSG00000244731.7	C4A	624370	3.71e-05	-0.233697	8e-27
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	7.35e-07	0.519012	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	1.46e-05	-0.281402	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000179344.16	HLA-DQB1	-58780	3.32e-05	-0.376533	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.46e-26	1.0526	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	7.35e-07	0.519012	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	1.46e-05	-0.281402	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000179344.16	HLA-DQB1	-58780	3.32e-05	-0.376533	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.46e-26	1.0526	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	7.35e-07	0.519012	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	1.46e-05	-0.281402	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000179344.16	HLA-DQB1	-58780	3.32e-05	-0.376533	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.46e-26	1.0526	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	7.35e-07	0.519012	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	1.46e-05	-0.281402	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000179344.16	HLA-DQB1	-58780	3.32e-05	-0.376533	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.46e-26	1.0526	1e-300
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	2.1e-28	1.22222	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	5.55e-12	0.79292	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000196126.11	HLA-DRB1	25025	6.85e-06	-0.329994	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	2.1e-28	1.22222	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	5.55e-12	0.79292	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000196126.11	HLA-DRB1	25025	6.85e-06	-0.329994	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000229391.7	HLA-DRB6	55558	5.55e-12	0.79292	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000196126.11	HLA-DRB1	25732	6.85e-06	-0.329994	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000237541.3	HLA-DQA2	-125762	2.1e-28	1.22222	2e-10
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000198502.5	HLA-DRB5	85678	4.67e-23	-0.789867	5e-07
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000229391.7	HLA-DRB6	69223	2.23e-11	0.772269	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000196126.11	HLA-DRB1	39397	1.73e-05	-0.315825	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000237541.3	HLA-DQA2	-112097	3.96e-29	1.23311	3e-11
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	3.28e-08	0.49039	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000223534.1	HLA-DQB1-AS1	35719	1.06e-08	-0.347774	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000179344.16	HLA-DQB1	27691	1.58e-06	-0.348946	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	3.28e-08	0.49039	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000223534.1	HLA-DQB1-AS1	35719	1.06e-08	-0.347774	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000179344.16	HLA-DQB1	27691	1.58e-06	-0.348946	1e-09
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000237541.3	HLA-DQA2	-45120	3.28e-08	0.49039	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000179344.16	HLA-DQB1	27839	1.58e-06	-0.348946	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000223534.1	HLA-DQB1-AS1	35867	1.06e-08	-0.347774	4e-186
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000237541.3	HLA-DQA2	-42012	1.54e-15	1.14563	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000241106.6	HLA-DOB	-117718	1.55e-08	0.72111	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000229391.7	HLA-DRB6	139308	3.48e-08	0.783301	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000237541.3	HLA-DQA2	-35545	1.54e-15	1.14563	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000229391.7	HLA-DRB6	145775	3.48e-08	0.783301	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000241106.6	HLA-DOB	-111251	1.55e-08	0.72111	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000241106.6	HLA-DOB	-109302	1.55e-08	0.72111	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000229391.7	HLA-DRB6	147724	3.48e-08	0.783301	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000237541.3	HLA-DQA2	-33596	1.54e-15	1.14563	2e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000241106.6	HLA-DOB	-109191	1.55e-08	0.72111	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000237541.3	HLA-DQA2	-33485	1.54e-15	1.14563	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000229391.7	HLA-DRB6	147835	3.48e-08	0.783301	5e-06
rheumatoid arthritis	6_32713151	rs7765379	ENSG00000237541.3	HLA-DQA2	-28191	4.36e-05	0.604386	5e-23
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000229391.7	HLA-DRB6	153684	3.48e-08	0.783301	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000241106.6	HLA-DOB	-103342	1.55e-08	0.72111	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000237541.3	HLA-DQA2	-27636	1.54e-15	1.14563	2e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000229391.7	HLA-DRB6	153731	3.48e-08	0.783301	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000237541.3	HLA-DQA2	-27589	1.54e-15	1.14563	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000241106.6	HLA-DOB	-103295	1.55e-08	0.72111	1e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000241106.6	HLA-DOB	-102806	1.55e-08	0.72111	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000237541.3	HLA-DQA2	-27100	1.54e-15	1.14563	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000229391.7	HLA-DRB6	154220	3.48e-08	0.783301	2e-06
rheumatoid arthritis	6_36387877	rs2234067	ENSG00000010030.13	ETV7	77	4.91e-09	0.381974	4e-08
rheumatoid arthritis	6_36387877	rs2234067	ENSG00000010030.13	ETV7	77	4.91e-09	0.381974	2e-09
rheumatoid arthritis	7_128932712	rs4731532	ENSG00000128604.19	IRF5	-4900	2.16e-06	0.248543	1e-07
rheumatoid arthritis	7_128933913	rs4728142	ENSG00000128604.19	IRF5	-3699	2.69e-07	0.282339	5e-12
rheumatoid arthritis	7_128933913	rs4728142	ENSG00000128604.19	IRF5	-3699	2.69e-07	0.282339	7e-10
rheumatoid arthritis	7_128936032	rs3757387	ENSG00000128604.19	IRF5	-1580	3.14e-07	0.273189	2e-19
rheumatoid arthritis	7_128936032	rs3757387	ENSG00000128604.19	IRF5	-1580	3.14e-07	0.273189	5e-09
rheumatoid arthritis	7_128939988	rs3778753	ENSG00000128604.19	IRF5	2376	2.33e-06	0.249677	3e-14
rheumatoid arthritis	7_128939988	rs3778753	ENSG00000128604.19	IRF5	2376	2.33e-06	0.249677	4e-12
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	3.72e-06	0.243445	3e-07
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	3.72e-06	0.243445	5e-10
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	3.72e-06	0.243445	7e-10
rheumatoid arthritis	7_128949579	rs10954214	ENSG00000128604.19	IRF5	11967	6.97e-06	0.23708	7e-17
rheumatoid arthritis	7_92607515	rs4272	ENSG00000157259.6	GATAD1	160062	5.19e-05	-0.248238	3e-07
rheumatoid arthritis	7_92607515	rs4272	ENSG00000157259.6	GATAD1	160062	5.19e-05	-0.248238	5e-07
rheumatoid arthritis	7_92607515	rs4272	ENSG00000157259.6	GATAD1	160062	5.19e-05	-0.248238	1e-08
rheumatoid arthritis	7_92607515	rs4272	ENSG00000157259.6	GATAD1	160062	5.19e-05	-0.248238	5e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	1.64e-13	-0.610226	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	1.64e-13	-0.610226	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	1.64e-13	-0.610226	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	1.64e-13	-0.610226	4e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000226752.9	CUTALP	64195	7.74e-14	-0.610798	3e-09
rheumatoid arthritis	9_120890620	rs881375	ENSG00000226752.9	CUTALP	65792	1.3e-16	-0.720542	4e-08
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000226752.9	CUTALP	75512	4.35e-15	-0.648031	4e-12
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000226752.9	CUTALP	81093	4.04e-17	-0.725429	1e-10
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	1.77e-15	-0.62946	4e-07
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	1.77e-15	-0.62946	2e-08
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	6.6e-16	-0.634927	4e-14
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	6.6e-16	-0.634927	2e-07
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000226752.9	CUTALP	108176	2.13e-18	-0.745628	2e-06
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000226752.9	CUTALP	119276	1.53e-18	-0.74915	6e-09
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	2.19e-05	-0.247712	1e-12
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	2.19e-05	-0.247712	3e-12
rheumatoid arthritis	X_154018741	rs1059702	ENSG00000177854.7	TMEM187	46414	1.2e-05	0.253032	5e-10
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	2.6e-05	0.239939	4e-22
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	2.6e-05	0.239939	5e-16
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	2.6e-05	0.239939	3e-12