DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
rheumatoid arthritis	1_2552522	rs2258734	ENSG00000142606.15	MMEL1	-80468	1.34e-13	-0.385516	6e-14
rheumatoid arthritis	1_2569783	rs10797431	ENSG00000142606.15	MMEL1	-63207	3.57e-13	-0.362898	1e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000142606.15	MMEL1	-36296	9.7e-15	0.39426	4e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000142606.15	MMEL1	-36296	9.7e-15	0.39426	7e-12
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000142606.15	MMEL1	-36296	9.7e-15	0.39426	7e-10
rheumatoid arthritis	1_2603539	rs6664969	ENSG00000215912.12	TTC34	-198178	5.71e-06	0.187781	1e-08
rheumatoid arthritis	1_2603539	rs6664969	ENSG00000142606.15	MMEL1	-29451	3.47e-13	-0.372003	1e-08
rheumatoid arthritis	1_2608357	rs4073285	ENSG00000142606.15	MMEL1	-24633	5.73e-14	-0.386716	2e-13
rheumatoid arthritis	1_2608357	rs4073285	ENSG00000215912.12	TTC34	-193360	5.68e-06	0.190198	2e-13
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	3.13e-14	-0.384592	4e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	3.13e-14	-0.384592	1e-07
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	3.13e-14	-0.384592	2e-08
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	3.13e-14	-0.384592	1e-06
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	2.16e-09	0.444744	6e-12
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	2.16e-09	0.444744	5e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	2.16e-09	0.444744	6e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	2.16e-09	0.444744	3e-12
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	2.16e-09	0.444744	2e-11
rheumatoid arthritis	10_99530544	rs6584283	ENSG00000257582.5	LINC01475	-633	1.34e-12	-0.577424	3e-10
rheumatoid arthritis	10_99538694	rs1332099	ENSG00000257582.5	LINC01475	7517	1.07e-09	-0.500076	5e-10
rheumatoid arthritis	11_609888	rs12421158	ENSG00000177042.14	TMEM80	-85645	1.14e-07	0.443403	4e-06
rheumatoid arthritis	11_61822009	rs28456	ENSG00000134824.13	FADS2	5753	3.82e-13	0.645715	4e-06
rheumatoid arthritis	11_61828092	rs968567	ENSG00000134824.13	FADS2	11836	2.03e-31	1.1278	2e-08
rheumatoid arthritis	11_61828092	rs968567	ENSG00000134824.13	FADS2	11836	2.03e-31	1.1278	7e-07
rheumatoid arthritis	11_633689	rs7929541	ENSG00000177042.14	TMEM80	-61844	5.45e-07	0.416823	2e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	2.4e-16	-0.430787	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.68e-22	0.853772	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	2.4e-16	-0.430787	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.68e-22	0.853772	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	2.4e-16	-0.430787	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.68e-22	0.853772	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	2.4e-16	-0.430787	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	1.68e-22	0.853772	1e-10
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	1.69e-06	-0.24651	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	1.69e-06	-0.24651	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	1.69e-06	-0.24651	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	1.69e-06	-0.24651	1e-07
rheumatoid arthritis	15_90350436	rs6496667	ENSG00000140575.12	IQGAP1	-37782	7e-09	0.319334	1e-06
rheumatoid arthritis	15_90483245	rs8040585	ENSG00000140575.12	IQGAP1	95027	8.15e-12	0.302562	2e-08
rheumatoid arthritis	16_11745470	rs4780401	ENSG00000153066.12	TXNDC11	9237	6.14e-06	-0.168872	4e-08
rheumatoid arthritis	16_11745470	rs4780401	ENSG00000153066.12	TXNDC11	9237	6.14e-06	-0.168872	9e-09
rheumatoid arthritis	16_11745470	rs4780401	ENSG00000153066.12	TXNDC11	9237	6.14e-06	-0.168872	6e-07
rheumatoid arthritis	16_11745470	rs4780401	ENSG00000153066.12	TXNDC11	9237	6.14e-06	-0.168872	5e-07
rheumatoid arthritis	17_39583908	rs1877030	ENSG00000108306.11	FBXL20	181385	4.84e-06	0.404377	1e-08
rheumatoid arthritis	17_39583908	rs1877030	ENSG00000108306.11	FBXL20	181385	4.84e-06	0.404377	2e-08
rheumatoid arthritis	17_39877024	rs1054609	ENSG00000161395.13	PGAP3	180227	1.45e-07	-0.163845	6e-07
rheumatoid arthritis	17_39877024	rs1054609	ENSG00000172057.9	ORMDL3	-50577	9.19e-07	-0.289882	6e-07
rheumatoid arthritis	17_39877024	rs1054609	ENSG00000073605.18	GSDMB	-41626	2.04e-13	-0.262448	6e-07
rheumatoid arthritis	17_39884510	rs2872507	ENSG00000161395.13	PGAP3	187713	2.45e-07	-0.161025	9e-07
rheumatoid arthritis	17_39884510	rs2872507	ENSG00000172057.9	ORMDL3	-43091	1.56e-06	-0.284084	9e-07
rheumatoid arthritis	17_39884510	rs2872507	ENSG00000073605.18	GSDMB	-34140	1.21e-13	-0.264302	9e-07
rheumatoid arthritis	17_39884510	rs2872507	ENSG00000161395.13	PGAP3	187713	2.45e-07	-0.161025	3e-09
rheumatoid arthritis	17_39884510	rs2872507	ENSG00000172057.9	ORMDL3	-43091	1.56e-06	-0.284084	3e-09
rheumatoid arthritis	17_39884510	rs2872507	ENSG00000073605.18	GSDMB	-34140	1.21e-13	-0.264302	3e-09
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000161395.13	PGAP3	190599	4.77e-06	-0.151552	1e-10
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000172057.9	ORMDL3	-40205	1.21e-06	-0.301405	1e-10
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000073605.18	GSDMB	-31254	1.27e-14	-0.286523	1e-10
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000161395.13	PGAP3	190599	4.77e-06	-0.151552	7e-07
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000172057.9	ORMDL3	-40205	1.21e-06	-0.301405	7e-07
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000073605.18	GSDMB	-31254	1.27e-14	-0.286523	7e-07
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000161395.13	PGAP3	190599	4.77e-06	-0.151552	4e-07
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000172057.9	ORMDL3	-40205	1.21e-06	-0.301405	4e-07
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000073605.18	GSDMB	-31254	1.27e-14	-0.286523	4e-07
rheumatoid arthritis	17_39905943	rs2305480	ENSG00000172057.9	ORMDL3	-21658	3.9e-06	-0.288754	4e-09
rheumatoid arthritis	17_39905943	rs2305480	ENSG00000161395.13	PGAP3	209146	9.9e-06	-0.147248	4e-09
rheumatoid arthritis	17_39905943	rs2305480	ENSG00000073605.18	GSDMB	-12707	4.82e-14	-0.282309	4e-09
rheumatoid arthritis	17_5369285	rs72634030	ENSG00000167842.15	MIS12	-117000	6.71e-07	-0.49573	7e-08
rheumatoid arthritis	17_5369285	rs72634030	ENSG00000167842.15	MIS12	-117000	6.71e-07	-0.49573	2e-09
rheumatoid arthritis	18_69876810	rs2469434	ENSG00000206052.10	DOK6	475755	2.51e-06	0.329458	2e-06
rheumatoid arthritis	18_69876810	rs2469434	ENSG00000206052.10	DOK6	475755	2.51e-06	0.329458	2e-06
rheumatoid arthritis	18_69876810	rs2469434	ENSG00000206052.10	DOK6	475755	2.51e-06	0.329458	1e-08
rheumatoid arthritis	18_69876810	rs2469434	ENSG00000206052.10	DOK6	475755	2.51e-06	0.329458	9e-10
rheumatoid arthritis	2_197748584	rs770667	ENSG00000162944.10	RFTN2	72539	3.54e-05	-0.181808	2e-08
rheumatoid arthritis	2_203745673	rs1980422	ENSG00000224791.1	KRT18P39	-19920	1.48e-05	-0.30235	2e-17
rheumatoid arthritis	2_203745673	rs1980422	ENSG00000224791.1	KRT18P39	-19920	1.48e-05	-0.30235	6e-11
rheumatoid arthritis	2_203745673	rs1980422	ENSG00000224791.1	KRT18P39	-19920	1.48e-05	-0.30235	3e-07
rheumatoid arthritis	2_203745673	rs1980422	ENSG00000224791.1	KRT18P39	-19920	1.48e-05	-0.30235	3e-12
rheumatoid arthritis	2_203745673	rs1980422	ENSG00000224791.1	KRT18P39	-19920	1.48e-05	-0.30235	5e-06
rheumatoid arthritis	2_203745673	rs1980422	ENSG00000224791.1	KRT18P39	-19920	1.48e-05	-0.30235	3e-14
rheumatoid arthritis	2_203745673	rs1980422	ENSG00000224791.1	KRT18P39	-19920	1.48e-05	-0.30235	2e-13
rheumatoid arthritis	2_203747335	rs7426056	ENSG00000224791.1	KRT18P39	-18258	2.24e-05	-0.293284	1e-08
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	2.04e-13	0.355362	8e-11
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	2.04e-13	0.355362	8e-11
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	2.04e-13	0.355362	7e-12
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	2.04e-13	0.355362	2e-13
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	2.04e-13	0.355362	6e-12
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	2.04e-13	0.355362	1e-08
rheumatoid arthritis	22_21561877	rs5754100	ENSG00000161180.10	CCDC116	-70839	4.25e-06	-0.543153	9e-09
rheumatoid arthritis	22_21562072	rs5754104	ENSG00000161180.10	CCDC116	-70644	6.13e-06	-0.549901	1e-10
rheumatoid arthritis	22_21602364	rs2283790	ENSG00000161180.10	CCDC116	-30352	1.95e-07	-0.584012	2e-11
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	2.03e-10	-0.656416	4e-06
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	2.03e-10	-0.656416	2e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	2.03e-10	-0.656416	2e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	2.03e-10	-0.656416	1e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	2.03e-10	-0.656416	6e-07
rheumatoid arthritis	22_21625000	rs4821124	ENSG00000161180.10	CCDC116	-7716	7.93e-07	-0.581797	2e-11
rheumatoid arthritis	22_21630805	rs5754467	ENSG00000161180.10	CCDC116	-1911	5.49e-07	-0.577772	1e-13
rheumatoid arthritis	22_39351666	rs909685	ENSG00000100321.14	SYNGR1	1741	4.29e-19	0.378117	6e-12
rheumatoid arthritis	22_39351666	rs909685	ENSG00000100321.14	SYNGR1	1741	4.29e-19	0.378117	4e-06
rheumatoid arthritis	22_39351666	rs909685	ENSG00000100321.14	SYNGR1	1741	4.29e-19	0.378117	3e-09
rheumatoid arthritis	22_39351666	rs909685	ENSG00000100321.14	SYNGR1	1741	4.29e-19	0.378117	4e-14
rheumatoid arthritis	22_39351666	rs909685	ENSG00000100321.14	SYNGR1	1741	4.29e-19	0.378117	3e-10
rheumatoid arthritis	22_39351666	rs909685	ENSG00000100321.14	SYNGR1	1741	4.29e-19	0.378117	2e-07
rheumatoid arthritis	22_39351666	rs909685	ENSG00000100321.14	SYNGR1	1741	4.29e-19	0.378117	1e-16
rheumatoid arthritis	22_39351775	rs2069235	ENSG00000100321.14	SYNGR1	1850	4.29e-19	0.378117	2e-20
rheumatoid arthritis	22_39353976	rs5757628	ENSG00000100321.14	SYNGR1	4051	1.51e-11	0.346619	8e-10
rheumatoid arthritis	22_39360645	rs2049985	ENSG00000100321.14	SYNGR1	10720	1.88e-10	0.339234	4e-09
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000182179.12	UBA7	-153920	5.95e-06	0.164847	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000004534.14	RBM6	-279981	2.44e-05	0.298652	6e-06
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000182179.12	UBA7	-139082	5.46e-06	0.167548	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000004534.14	RBM6	-265143	4.6e-05	0.292665	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000164068.15	RNF123	-14638	9.41e-05	-0.129937	5e-07
rheumatoid arthritis	3_58197909	rs35677470	ENSG00000168297.15	PXK	-134971	5.49e-05	0.325451	5e-09
rheumatoid arthritis	3_58197909	rs35677470	ENSG00000168297.15	PXK	-134971	5.49e-05	0.325451	2e-07
rheumatoid arthritis	3_58197909	rs35677470	ENSG00000168297.15	PXK	-134971	5.49e-05	0.325451	2e-08
rheumatoid arthritis	3_58197909	rs35677470	ENSG00000168297.15	PXK	-134971	5.49e-05	0.325451	1e-06
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000168297.15	PXK	-15672	2.19e-06	0.36975	5e-08
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000168297.15	PXK	-15672	2.19e-06	0.36975	1e-08
rheumatoid arthritis	3_58317208	rs73081554	ENSG00000168297.15	PXK	-15672	2.19e-06	0.36975	5e-08
rheumatoid arthritis	4_25415622	rs3816587	ENSG00000053900.10	ANAPC4	38409	5.1e-16	-0.471547	9e-06
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145214.13	DGKQ	-14963	7.93e-07	0.177229	1e-08
rheumatoid arthritis	4_971932	rs13101828	ENSG00000127415.12	IDUA	-15065	1.58e-05	0.238607	1e-08
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145217.13	SLC26A1	-21508	1.27e-10	-0.324082	1e-08
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	1.47e-05	0.511442	7e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	1.47e-05	0.511442	1e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	1.47e-05	0.511442	1e-09
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	1.47e-05	0.511442	2e-11
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	1.47e-05	0.511442	9e-08
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	1.47e-05	0.511442	5e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	1.47e-05	0.511442	6e-10
rheumatoid arthritis	5_10704685	rs2918392	ENSG00000112977.15	DAP	-56587	3.85e-07	-0.191802	5e-08
rheumatoid arthritis	5_132094425	rs657075	ENSG00000164398.12	ACSL6	82182	8.3e-06	0.654119	3e-10
rheumatoid arthritis	5_132094425	rs657075	ENSG00000164398.12	ACSL6	82182	8.3e-06	0.654119	8e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000164398.12	ACSL6	82182	8.3e-06	0.654119	1e-06
rheumatoid arthritis	5_132094425	rs657075	ENSG00000164398.12	ACSL6	82182	8.3e-06	0.654119	8e-07
rheumatoid arthritis	5_132094425	rs657075	ENSG00000164398.12	ACSL6	82182	8.3e-06	0.654119	6e-06
rheumatoid arthritis	5_132461855	rs6894249	ENSG00000113522.13	RAD50	-94164	4.58e-05	0.214772	1e-14
rheumatoid arthritis	5_150858959	rs147018773	ENSG00000197083.11	ZNF300P1	-87330	4.82e-15	0.942383	2e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204338.8	CYP21A1P	-620137	4.05e-06	-0.678648	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000137312.14	FLOT1	642819	1.98e-05	0.330202	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000244731.7	C4A	-596472	8.45e-07	-0.638554	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204536.13	CCHCR1	227314	7.06e-06	0.555798	9e-09
rheumatoid arthritis	6_31654829	rs805297	ENSG00000213676.10	ATF6B	-473424	2.02e-06	0.255193	3e-10
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204428.12	LY6G5C	-29211	8.74e-06	0.376895	3e-10
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000237541.3	HLA-DQA2	-333146	1.63e-11	0.82277	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000229391.7	HLA-DRB6	-151826	2.3e-05	0.500053	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000204290.10	BTNL2	1068	4.08e-06	0.496718	2e-124
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000244731.7	C4A	465279	5.95e-06	-0.431037	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000204305.13	AGER	262979	2.8e-05	0.271244	2e-09
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	6.41e-07	0.465328	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	3.41e-05	0.426673	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	6.41e-07	0.465328	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	3.41e-05	0.426673	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	6.41e-07	0.465328	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	3.41e-05	0.426673	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	6.41e-07	0.465328	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	3.41e-05	0.426673	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	6.41e-07	0.465328	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	3.41e-05	0.426673	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	6.41e-07	0.465328	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	3.41e-05	0.426673	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	6.41e-07	0.465328	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	3.41e-05	0.426673	1e-250
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000229391.7	HLA-DRB6	-83601	6.41e-07	0.465328	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000237541.3	HLA-DQA2	-264921	3.41e-05	0.426673	5e-58
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000229391.7	HLA-DRB6	-73863	7.12e-06	0.430936	6e-227
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000196301.3	HLA-DRB9	59867	2.19e-07	0.486276	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000198502.5	HLA-DRB5	3080	3.29e-11	-0.576176	9e-52
rheumatoid arthritis	6_32606394	rs615672	ENSG00000179344.16	HLA-DQB1	-61989	1.58e-05	-0.320063	8e-27
rheumatoid arthritis	6_32606394	rs615672	ENSG00000196301.3	HLA-DRB9	132894	3.07e-05	0.413187	8e-27
rheumatoid arthritis	6_32606394	rs615672	ENSG00000198502.5	HLA-DRB5	76107	2.84e-06	-0.439404	8e-27
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	5.42e-18	0.904664	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.46e-06	0.432207	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	5.42e-18	0.904664	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.46e-06	0.432207	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	5.42e-18	0.904664	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.46e-06	0.432207	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	5.42e-18	0.904664	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000232629.8	HLA-DQB2	-153931	1.46e-06	0.432207	2e-08
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	9.41e-18	1.03626	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	6.05e-08	0.650806	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000232629.8	HLA-DQB2	-148661	7.27e-06	0.466241	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	9.41e-18	1.03626	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	6.05e-08	0.650806	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000232629.8	HLA-DQB2	-148661	7.27e-06	0.466241	5e-21
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000229391.7	HLA-DRB6	55558	6.05e-08	0.650806	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000232629.8	HLA-DQB2	-147954	7.27e-06	0.466241	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000237541.3	HLA-DQA2	-125762	9.41e-18	1.03626	2e-10
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000198502.5	HLA-DRB5	85678	3.44e-11	-0.653425	5e-07
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000196301.3	HLA-DRB9	142465	1.52e-06	0.515592	5e-07
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000229391.7	HLA-DRB6	55943	1.35e-05	0.449942	5e-07
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000232629.8	HLA-DQB2	-134289	6.08e-06	0.471749	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000237541.3	HLA-DQA2	-112097	3.05e-18	1.05202	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000229391.7	HLA-DRB6	69223	5.92e-07	0.607137	3e-11
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000237541.3	HLA-DQA2	-42012	2.12e-08	0.943225	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000204267.13	TAP2	-139450	8.46e-06	-0.380879	2e-06
rheumatoid arthritis	6_32703326	rs13192471	ENSG00000232629.8	HLA-DQB2	-60208	1.64e-07	-0.505237	2e-58
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000237541.3	HLA-DQA2	-35545	2.12e-08	0.943225	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000204267.13	TAP2	-132983	8.46e-06	-0.380879	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000237541.3	HLA-DQA2	-33596	2.12e-08	0.943225	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000204267.13	TAP2	-131034	8.46e-06	-0.380879	2e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000237541.3	HLA-DQA2	-33485	2.12e-08	0.943225	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000204267.13	TAP2	-130923	8.46e-06	-0.380879	5e-06
rheumatoid arthritis	6_32713151	rs7765379	ENSG00000237541.3	HLA-DQA2	-28191	1.96e-07	0.845739	5e-23
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000237541.3	HLA-DQA2	-27636	2.12e-08	0.943225	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000204267.13	TAP2	-125074	8.46e-06	-0.380879	2e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000204267.13	TAP2	-125027	8.46e-06	-0.380879	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000237541.3	HLA-DQA2	-27589	2.12e-08	0.943225	1e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000237541.3	HLA-DQA2	-27100	1.3e-07	0.903486	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000204267.13	TAP2	-124538	1.97e-06	-0.408886	2e-06
rheumatoid arthritis	7_128932712	rs4731532	ENSG00000128604.19	IRF5	-4900	5e-11	0.185015	1e-07
rheumatoid arthritis	7_128933913	rs4728142	ENSG00000128604.19	IRF5	-3699	4.65e-12	0.203928	7e-10
rheumatoid arthritis	7_128933913	rs4728142	ENSG00000128604.19	IRF5	-3699	4.65e-12	0.203928	5e-12
rheumatoid arthritis	7_128936032	rs3757387	ENSG00000128604.19	IRF5	-1580	4.04e-13	0.203403	5e-09
rheumatoid arthritis	7_128936032	rs3757387	ENSG00000128604.19	IRF5	-1580	4.04e-13	0.203403	2e-19
rheumatoid arthritis	7_128939988	rs3778753	ENSG00000128604.19	IRF5	2376	5.33e-12	0.193647	3e-14
rheumatoid arthritis	7_128939988	rs3778753	ENSG00000128604.19	IRF5	2376	5.33e-12	0.193647	4e-12
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	3.74e-12	0.192373	5e-10
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	3.74e-12	0.192373	3e-07
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	3.74e-12	0.192373	7e-10
rheumatoid arthritis	7_128949579	rs10954214	ENSG00000128604.19	IRF5	11967	3.14e-05	0.124843	7e-17
rheumatoid arthritis	7_92607515	rs4272	ENSG00000157259.6	GATAD1	160062	1.4e-06	-0.392408	3e-07
rheumatoid arthritis	7_92607515	rs4272	ENSG00000157259.6	GATAD1	160062	1.4e-06	-0.392408	5e-07
rheumatoid arthritis	7_92607515	rs4272	ENSG00000157259.6	GATAD1	160062	1.4e-06	-0.392408	5e-09
rheumatoid arthritis	7_92607515	rs4272	ENSG00000157259.6	GATAD1	160062	1.4e-06	-0.392408	1e-08
rheumatoid arthritis	7_92609830	rs42034	ENSG00000157259.6	GATAD1	162377	2.03e-05	-0.32047	1e-08
rheumatoid arthritis	8_11480861	rs2618444	ENSG00000136573.12	BLK	-13140	5.41e-06	-0.211024	7e-12
rheumatoid arthritis	8_11480861	rs2618444	ENSG00000154319.14	FAM167A	6146	1.44e-08	0.447783	7e-12
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000154319.14	FAM167A	9656	2.93e-08	0.440729	2e-07
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000154319.14	FAM167A	9656	2.93e-08	0.440729	8e-08
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000154319.14	FAM167A	9656	2.93e-08	0.440729	3e-13
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000154319.14	FAM167A	9656	2.93e-08	0.440729	2e-07
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000154319.14	FAM167A	9656	2.93e-08	0.440729	5e-22
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000154319.14	FAM167A	9656	2.93e-08	0.440729	4e-13
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000154319.14	FAM167A	9656	2.93e-08	0.440729	2e-06
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000136573.12	BLK	-7537	1.3e-05	-0.201911	6e-09
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000154319.14	FAM167A	11749	1.16e-08	0.448181	6e-09
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000136573.12	BLK	-7537	1.3e-05	-0.201911	9e-12
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000154319.14	FAM167A	11749	1.16e-08	0.448181	9e-12
rheumatoid arthritis	8_11488036	rs4840565	ENSG00000154319.14	FAM167A	13321	7.9e-07	0.377713	4e-06
rheumatoid arthritis	8_11491452	rs9693589	ENSG00000136573.12	BLK	-2549	6.36e-06	-0.214782	2e-18
rheumatoid arthritis	8_11491452	rs9693589	ENSG00000154319.14	FAM167A	16737	1.8e-08	0.456259	2e-18
rheumatoid arthritis	8_11494403	rs922483	ENSG00000154319.14	FAM167A	19688	9.11e-09	0.423313	2e-07
rheumatoid arthritis	9_120890620	rs881375	ENSG00000226752.9	CUTALP	65792	3.69e-05	-0.424731	4e-08
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000226752.9	CUTALP	81093	3.69e-05	-0.424731	1e-10
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000226752.9	CUTALP	108176	1.78e-05	-0.432252	2e-06
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000226752.9	CUTALP	119276	1.92e-05	-0.434793	6e-09
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	6.24e-10	-0.518284	1e-12
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	6.24e-10	-0.518284	3e-12
rheumatoid arthritis	X_154018741	rs1059702	ENSG00000177854.7	TMEM187	46414	4.36e-09	0.472408	5e-10
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	4.65e-08	0.413544	3e-12
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	4.65e-08	0.413544	4e-22
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	4.65e-08	0.413544	5e-16