DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE rheumatoid arthritis 1_113891324 rs1217393 ENSG00000134262.12 AP4B1 -13816 8.45e-08 -0.217158 5e-09 rheumatoid arthritis 1_113891324 rs1217393 ENSG00000226167.1 AP4B1-AS1 34689 8.33e-15 -0.440637 5e-09 rheumatoid arthritis 1_154452980 rs12126142 ENSG00000169291.9 SHE -49133 2.63e-06 -0.178197 1e-10 rheumatoid arthritis 1_154454494 rs8192284 ENSG00000169291.9 SHE -47619 1.03e-06 -0.186208 1e-08 rheumatoid arthritis 1_154454494 rs2228145 ENSG00000169291.9 SHE -47619 1.03e-06 -0.186208 5e-06 rheumatoid arthritis 1_154454494 rs2228145 ENSG00000169291.9 SHE -47619 1.03e-06 -0.186208 1e-07 rheumatoid arthritis 1_154454494 rs2228145 ENSG00000169291.9 SHE -47619 1.03e-06 -0.186208 3e-09 rheumatoid arthritis 1_154454494 rs2228145 ENSG00000169291.9 SHE -47619 1.03e-06 -0.186208 4e-09 rheumatoid arthritis 1_154454494 rs8192284 ENSG00000169291.9 SHE -47619 1.03e-06 -0.186208 2e-07 rheumatoid arthritis 1_154454494 rs2228145 ENSG00000169291.9 SHE -47619 1.03e-06 -0.186208 5e-06 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000225217.1 HSPA7 -171028 8.41e-11 -0.606221 5e-07 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000244682.7 FCGR2C -146076 1.56e-08 -0.526873 5e-07 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000225217.1 HSPA7 -171028 8.41e-11 -0.606221 1e-07 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000244682.7 FCGR2C -146076 1.56e-08 -0.526873 1e-07 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000225217.1 HSPA7 -171028 8.41e-11 -0.606221 1e-06 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000244682.7 FCGR2C -146076 1.56e-08 -0.526873 1e-06 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000225217.1 HSPA7 -171028 8.41e-11 -0.606221 2e-06 rheumatoid arthritis 1_161435263 rs72717009 ENSG00000244682.7 FCGR2C -146076 1.56e-08 -0.526873 2e-06 rheumatoid arthritis 1_161505960 rs10494360 ENSG00000235101.1 SETP9 835812 7.69e-05 0.257514 3e-07 rheumatoid arthritis 1_161505960 rs10494360 ENSG00000225217.1 HSPA7 -100331 1.25e-09 -0.567058 3e-07 rheumatoid arthritis 1_161505960 rs10494360 ENSG00000244682.7 FCGR2C -75379 1.22e-07 -0.49238 3e-07 rheumatoid arthritis 1_17087404 rs761426 ENSG00000117118.9 SDHB 33234 1.47e-07 -0.223131 1e-06 rheumatoid arthritis 1_17087404 rs761426 ENSG00000117118.9 SDHB 33234 1.47e-07 -0.223131 2e-10 rheumatoid arthritis 1_17103279 rs2235909 ENSG00000117118.9 SDHB 49109 2.54e-05 -0.170263 2e-09 rheumatoid arthritis 1_200905600 rs55838263 ENSG00000233217.2 MROH3P -11860 1.44e-05 0.182915 4e-15 rheumatoid arthritis 1_200905600 rs55838263 ENSG00000163362.10 INAVA 14552 2.65e-06 -0.275001 4e-15 rheumatoid arthritis 1_200905600 rs55838263 ENSG00000081248.10 CACNA1S -206966 4.65e-07 0.287946 4e-15 rheumatoid arthritis 1_2608357 rs4073285 ENSG00000215912.12 TTC34 -193360 3.51e-05 0.0919254 2e-13 rheumatoid arthritis 1_2622185 rs3890745 ENSG00000215912.12 TTC34 -179532 3.3e-05 0.0924367 1e-07 rheumatoid arthritis 1_2622185 rs3890745 ENSG00000215912.12 TTC34 -179532 3.3e-05 0.0924367 1e-06 rheumatoid arthritis 1_2622185 rs3890745 ENSG00000215912.12 TTC34 -179532 3.3e-05 0.0924367 2e-08 rheumatoid arthritis 1_2622185 rs3890745 ENSG00000215912.12 TTC34 -179532 3.3e-05 0.0924367 4e-06 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000204084.12 INPP5B -134150 8.63e-17 0.335896 2e-11 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000214141.4 ACTN4P2 36237 1.91e-19 -0.683658 2e-11 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000204084.12 INPP5B -134150 8.63e-17 0.335896 6e-09 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000214141.4 ACTN4P2 36237 1.91e-19 -0.683658 6e-09 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000204084.12 INPP5B -134150 8.63e-17 0.335896 6e-12 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000214141.4 ACTN4P2 36237 1.91e-19 -0.683658 6e-12 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000204084.12 INPP5B -134150 8.63e-17 0.335896 3e-12 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000214141.4 ACTN4P2 36237 1.91e-19 -0.683658 3e-12 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000204084.12 INPP5B -134150 8.63e-17 0.335896 5e-09 rheumatoid arthritis 1_37812907 rs28411352 ENSG00000214141.4 ACTN4P2 36237 1.91e-19 -0.683658 5e-09 rheumatoid arthritis 1_67215986 rs7517847 ENSG00000203963.11 C1orf141 -15867 1.5e-09 -0.252742 5e-43 rheumatoid arthritis 10_31061565 rs1776616 ENSG00000183621.15 ZNF438 29628 7.84e-08 0.307383 2e-09 rheumatoid arthritis 10_31122426 rs1538981 ENSG00000183621.15 ZNF438 90489 5.38e-08 0.269054 4e-09 rheumatoid arthritis 10_31126177 rs793108 ENSG00000183621.15 ZNF438 94240 1.19e-06 0.23279 6e-07 rheumatoid arthritis 10_31126177 rs793108 ENSG00000183621.15 ZNF438 94240 1.19e-06 0.23279 8e-06 rheumatoid arthritis 10_31126177 rs793108 ENSG00000183621.15 ZNF438 94240 1.19e-06 0.23279 1e-09 rheumatoid arthritis 10_31126177 rs793108 ENSG00000183621.15 ZNF438 94240 1.19e-06 0.23279 2e-07 rheumatoid arthritis 10_6059750 rs3118470 ENSG00000170525.19 PFKFB3 -85184 1.89e-05 0.208263 1e-06 rheumatoid arthritis 10_62685804 rs10761659 ENSG00000181915.4 ADO -119053 2.38e-05 -0.113615 2e-20 rheumatoid arthritis 10_80462422 rs7100689 ENSG00000151224.12 MAT1A 172738 4.96e-08 -0.293725 7e-08 rheumatoid arthritis 10_80462422 rs7100689 ENSG00000178217.13 SH2D4B -75480 4.07e-05 -0.379112 7e-08 rheumatoid arthritis 11_108096623 rs138193887 ENSG00000178202.12 POGLUT3 -401809 0.000126551 0.174211 4e-07 rheumatoid arthritis 11_118741072 rs10892279 ENSG00000255239.1 TREHP1 50472 1.72e-07 -0.489679 1e-10 rheumatoid arthritis 11_118741072 rs10892279 ENSG00000255239.1 TREHP1 50472 1.72e-07 -0.489679 3e-08 rheumatoid arthritis 11_118806377 rs11217037 ENSG00000255239.1 TREHP1 115777 1.36e-05 -0.42933 1e-12 rheumatoid arthritis 11_118809939 rs11217040 ENSG00000255239.1 TREHP1 119339 6.38e-06 -0.439091 2e-11 rheumatoid arthritis 11_118858682 rs10790268 ENSG00000255239.1 TREHP1 168082 3.46e-05 0.393707 1e-13 rheumatoid arthritis 11_118858682 rs10790268 ENSG00000255239.1 TREHP1 168082 3.46e-05 0.393707 3e-15 rheumatoid arthritis 11_118858682 rs10790268 ENSG00000255239.1 TREHP1 168082 3.46e-05 0.393707 1e-17 rheumatoid arthritis 11_118858682 rs10790268 ENSG00000255239.1 TREHP1 168082 3.46e-05 0.393707 1e-15 rheumatoid arthritis 11_118871133 rs4938573 ENSG00000255239.1 TREHP1 180533 0.000110177 0.366813 5e-07 rheumatoid arthritis 11_609888 rs12421158 ENSG00000177042.14 TMEM80 -85645 5.82e-08 0.362393 4e-06 rheumatoid arthritis 11_609888 rs12421158 ENSG00000185507.19 IRF7 -6111 5.07e-05 0.150752 4e-06 rheumatoid arthritis 11_609888 rs12421158 ENSG00000069696.6 DRD4 -27405 4.51e-06 -0.218638 4e-06 rheumatoid arthritis 11_61138978 rs508970 ENSG00000110448.10 CD5 36583 7.44e-49 -0.922161 4e-06 rheumatoid arthritis 11_61138978 rs508970 ENSG00000167987.10 VPS37C -22639 4.45e-24 0.48486 4e-06 rheumatoid arthritis 11_61138978 rs508970 ENSG00000110448.10 CD5 36583 7.44e-49 -0.922161 3e-06 rheumatoid arthritis 11_61138978 rs508970 ENSG00000167987.10 VPS37C -22639 4.45e-24 0.48486 3e-06 rheumatoid arthritis 11_61142109 rs595158 ENSG00000167987.10 VPS37C -19508 4.83e-20 0.427137 3e-08 rheumatoid arthritis 11_61142109 rs595158 ENSG00000110448.10 CD5 39714 3.48e-46 -0.865625 3e-08 rheumatoid arthritis 11_61142109 rs595158 ENSG00000167987.10 VPS37C -19508 4.83e-20 0.427137 6e-06 rheumatoid arthritis 11_61142109 rs595158 ENSG00000110448.10 CD5 39714 3.48e-46 -0.865625 6e-06 rheumatoid arthritis 11_61142109 rs595158 ENSG00000167987.10 VPS37C -19508 4.83e-20 0.427137 6e-06 rheumatoid arthritis 11_61142109 rs595158 ENSG00000110448.10 CD5 39714 3.48e-46 -0.865625 6e-06 rheumatoid arthritis 11_61822009 rs28456 ENSG00000149485.18 FADS1 -7309 7.75e-12 -0.307282 4e-06 rheumatoid arthritis 11_61822009 rs28456 ENSG00000134824.13 FADS2 5753 2.33e-08 0.33607 4e-06 rheumatoid arthritis 11_61828092 rs968567 ENSG00000134824.13 FADS2 11836 9.83e-07 0.39469 2e-08 rheumatoid arthritis 11_61828092 rs968567 ENSG00000149485.18 FADS1 -1226 2.29e-09 -0.360839 2e-08 rheumatoid arthritis 11_61828092 rs968567 ENSG00000134824.13 FADS2 11836 9.83e-07 0.39469 7e-07 rheumatoid arthritis 11_61828092 rs968567 ENSG00000149485.18 FADS1 -1226 2.29e-09 -0.360839 7e-07 rheumatoid arthritis 11_633689 rs7929541 ENSG00000177042.14 TMEM80 -61844 2.57e-16 0.546831 2e-10 rheumatoid arthritis 11_633689 rs7929541 ENSG00000069696.6 DRD4 -3604 8.22e-05 -0.195108 2e-10 rheumatoid arthritis 12_112172910 rs11066188 ENSG00000089234.15 BRAP 486924 5.87e-05 -0.0578999 9e-10 rheumatoid arthritis 12_112433568 rs11066301 ENSG00000089234.15 BRAP 747582 4.18e-05 -0.0594131 4e-08 rheumatoid arthritis 12_24660347 rs4963581 ENSG00000197503.4 LINC00477 76787 6.23e-08 -0.275575 4e-08 rheumatoid arthritis 12_48021974 rs4760609 ENSG00000177981.10 ASB8 -159239 3.16e-11 0.313844 3e-12 rheumatoid arthritis 12_48021974 rs4760609 ENSG00000079387.13 SENP1 -83860 7e-09 0.117878 3e-12 rheumatoid arthritis 12_56001170 rs773125 ENSG00000139531.12 SUOX 3990 4.8e-22 -0.388693 2e-08 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 5.3e-61 0.890186 2e-08 rheumatoid arthritis 12_56001170 rs773125 ENSG00000139531.12 SUOX 3990 4.8e-22 -0.388693 9e-08 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 5.3e-61 0.890186 9e-08 rheumatoid arthritis 12_56001170 rs773125 ENSG00000139531.12 SUOX 3990 4.8e-22 -0.388693 1e-09 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 5.3e-61 0.890186 1e-09 rheumatoid arthritis 12_56001170 rs773125 ENSG00000139531.12 SUOX 3990 4.8e-22 -0.388693 1e-10 rheumatoid arthritis 12_56001170 rs773125 ENSG00000197728.9 RPS26 -40683 5.3e-61 0.890186 1e-10 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000123297.17 TSFM -207657 0.000128626 -0.198813 1e-07 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000135506.15 OS9 -119023 1.45e-05 -0.106874 1e-07 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000123329.17 ARHGAP9 86118 2.34e-13 0.259696 1e-07 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000166986.14 MARS1 99487 4.58e-07 0.218328 1e-07 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000123297.17 TSFM -207657 0.000128626 -0.198813 9e-08 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000135506.15 OS9 -119023 1.45e-05 -0.106874 9e-08 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000123329.17 ARHGAP9 86118 2.34e-13 0.259696 9e-08 rheumatoid arthritis 12_57574932 rs1678542 ENSG00000166986.14 MARS1 99487 4.58e-07 0.218328 9e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123297.17 TSFM -68320 1.69e-08 0.275712 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123329.17 ARHGAP9 225455 2.07e-05 -0.149073 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 1.03e-05 -0.235503 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000135506.15 OS9 20314 2.62e-21 0.209476 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123297.17 TSFM -68320 1.69e-08 0.275712 7e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123329.17 ARHGAP9 225455 2.07e-05 -0.149073 7e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 1.03e-05 -0.235503 7e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000135506.15 OS9 20314 2.62e-21 0.209476 7e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123297.17 TSFM -68320 1.69e-08 0.275712 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123329.17 ARHGAP9 225455 2.07e-05 -0.149073 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 1.03e-05 -0.235503 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000135506.15 OS9 20314 2.62e-21 0.209476 1e-07 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123297.17 TSFM -68320 1.69e-08 0.275712 9e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123329.17 ARHGAP9 225455 2.07e-05 -0.149073 9e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000123427.16 EEF1AKMT3 -57337 1.03e-05 -0.235503 9e-08 rheumatoid arthritis 12_57714269 rs1633360 ENSG00000135506.15 OS9 20314 2.62e-21 0.209476 9e-08 rheumatoid arthritis 13_39760715 rs9603612 ENSG00000133103.16 COG6 105088 7.16e-14 -0.313884 3e-13 rheumatoid arthritis 13_39776775 rs7993214 ENSG00000133103.16 COG6 121148 1.8e-12 0.294252 5e-06 rheumatoid arthritis 13_39781776 rs9532434 ENSG00000133103.16 COG6 126149 7.72e-13 0.294436 2e-19 rheumatoid arthritis 13_39793932 rs9603616 ENSG00000133103.16 COG6 138305 3.67e-12 -0.286229 2e-12 rheumatoid arthritis 13_39793932 rs9603616 ENSG00000133103.16 COG6 138305 3.67e-12 -0.286229 2e-12 rheumatoid arthritis 13_39793932 rs9603616 ENSG00000133103.16 COG6 138305 3.67e-12 -0.286229 8e-11 rheumatoid arthritis 13_39793932 rs9603616 ENSG00000133103.16 COG6 138305 3.67e-12 -0.286229 3e-11 rheumatoid arthritis 13_39797240 rs9603618 ENSG00000133103.16 COG6 141613 7.21e-09 -0.255334 5e-09 rheumatoid arthritis 14_104919812 rs2841269 ENSG00000166428.12 PLD4 -5004 2.25e-31 -0.591172 2e-16 rheumatoid arthritis 14_104924668 rs2841277 ENSG00000166428.12 PLD4 -148 1.06e-21 -0.507908 2e-14 rheumatoid arthritis 15_38535939 rs8043085 ENSG00000172575.11 RASGRP1 -29636 1.97e-05 -0.210815 2e-09 rheumatoid arthritis 15_38535939 rs8043085 ENSG00000172575.11 RASGRP1 -29636 1.97e-05 -0.210815 5e-11 rheumatoid arthritis 15_38535939 rs8043085 ENSG00000172575.11 RASGRP1 -29636 1.97e-05 -0.210815 2e-08 rheumatoid arthritis 15_38541832 rs8032939 ENSG00000172575.11 RASGRP1 -23743 3.32e-05 -0.20607 1e-09 rheumatoid arthritis 15_38541832 rs8032939 ENSG00000172575.11 RASGRP1 -23743 3.32e-05 -0.20607 2e-17 rheumatoid arthritis 15_38541832 rs8032939 ENSG00000172575.11 RASGRP1 -23743 3.32e-05 -0.20607 5e-24 rheumatoid arthritis 15_38541832 rs8032939 ENSG00000172575.11 RASGRP1 -23743 3.32e-05 -0.20607 9e-06 rheumatoid arthritis 15_38541832 rs8032939 ENSG00000172575.11 RASGRP1 -23743 3.32e-05 -0.20607 3e-16 rheumatoid arthritis 15_38541832 rs8032939 ENSG00000172575.11 RASGRP1 -23743 3.32e-05 -0.20607 2e-12 rheumatoid arthritis 15_38541832 rs8032939 ENSG00000172575.11 RASGRP1 -23743 3.32e-05 -0.20607 2e-18 rheumatoid arthritis 15_38541832 rs8032939 ENSG00000172575.11 RASGRP1 -23743 3.32e-05 -0.20607 3e-14 rheumatoid arthritis 15_90350436 rs6496667 ENSG00000140575.12 IQGAP1 -37782 3.31e-34 0.363894 1e-06 rheumatoid arthritis 15_90483245 rs8040585 ENSG00000140575.12 IQGAP1 95027 5.4e-19 0.23802 2e-08 rheumatoid arthritis 15_90483245 rs8040585 ENSG00000196391.10 ZNF774 131000 1.36e-08 -0.221084 2e-08 rheumatoid arthritis 16_30615295 rs12918327 ENSG00000140678.16 ITGAX -739839 6.82e-05 -0.207525 3e-08 rheumatoid arthritis 16_30615295 rs12918327 ENSG00000103549.21 RNF40 -147823 0.000126087 0.170614 3e-08 rheumatoid arthritis 16_30615295 rs12918327 ENSG00000099365.10 STX1B -395366 2.59e-05 0.218297 3e-08 rheumatoid arthritis 16_30615295 rs12918327 ENSG00000196118.11 CFAP119 -147415 2.48e-07 -0.190194 3e-08 rheumatoid arthritis 16_50722970 rs2076756 ENSG00000261644.2 CYLD-AS1 -19789 1.4e-07 0.351256 5e-13 rheumatoid arthritis 17_39583908 rs1877030 ENSG00000186075.12 ZPBP2 -284256 1.38e-05 -0.146916 1e-08 rheumatoid arthritis 17_39583908 rs1877030 ENSG00000186075.12 ZPBP2 -284256 1.38e-05 -0.146916 2e-08 rheumatoid arthritis 17_39877024 rs1054609 ENSG00000108344.14 PSMD3 -103773 1.74e-05 0.147282 6e-07 rheumatoid arthritis 17_39877024 rs1054609 ENSG00000186075.12 ZPBP2 8860 1.43e-21 -0.204217 6e-07 rheumatoid arthritis 17_39884510 rs2872507 ENSG00000186075.12 ZPBP2 16346 1.19e-21 -0.204884 9e-07 rheumatoid arthritis 17_39884510 rs2872507 ENSG00000108344.14 PSMD3 -96287 1.15e-05 0.150549 9e-07 rheumatoid arthritis 17_39884510 rs2872507 ENSG00000186075.12 ZPBP2 16346 1.19e-21 -0.204884 3e-09 rheumatoid arthritis 17_39884510 rs2872507 ENSG00000108344.14 PSMD3 -96287 1.15e-05 0.150549 3e-09 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000108344.14 PSMD3 -93401 7.07e-06 0.157246 4e-07 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000186075.12 ZPBP2 19232 1.75e-23 -0.216974 4e-07 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000108344.14 PSMD3 -93401 7.07e-06 0.157246 1e-10 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000186075.12 ZPBP2 19232 1.75e-23 -0.216974 1e-10 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000108344.14 PSMD3 -93401 7.07e-06 0.157246 7e-07 rheumatoid arthritis 17_39887396 rs12936409 ENSG00000186075.12 ZPBP2 19232 1.75e-23 -0.216974 7e-07 rheumatoid arthritis 17_39905943 rs2305480 ENSG00000108344.14 PSMD3 -74854 1.27e-05 0.155831 4e-09 rheumatoid arthritis 17_39905943 rs2305480 ENSG00000186075.12 ZPBP2 37779 1.19e-22 -0.217498 4e-09 rheumatoid arthritis 17_5369285 rs72634030 ENSG00000108559.11 NUP88 -50355 4.1e-11 -0.347122 7e-08 rheumatoid arthritis 17_5369285 rs72634030 ENSG00000161929.14 SCIMP 134425 5.08e-05 -0.500463 7e-08 rheumatoid arthritis 17_5369285 rs72634030 ENSG00000029725.16 RABEP1 87020 8.8e-07 -0.343113 7e-08 rheumatoid arthritis 17_5369285 rs72634030 ENSG00000129197.14 RPAIN -50876 3.87e-07 -0.400423 7e-08 rheumatoid arthritis 17_5369285 rs72634030 ENSG00000108559.11 NUP88 -50355 4.1e-11 -0.347122 2e-09 rheumatoid arthritis 17_5369285 rs72634030 ENSG00000161929.14 SCIMP 134425 5.08e-05 -0.500463 2e-09 rheumatoid arthritis 17_5369285 rs72634030 ENSG00000029725.16 RABEP1 87020 8.8e-07 -0.343113 2e-09 rheumatoid arthritis 17_5369285 rs72634030 ENSG00000129197.14 RPAIN -50876 3.87e-07 -0.400423 2e-09 rheumatoid arthritis 17_78232490 rs11868709 ENSG00000089685.14 BIRC5 18304 3.4e-13 -0.21601 7e-11 rheumatoid arthritis 18_69876810 rs2469434 ENSG00000150637.8 CD226 -84993 4.71e-06 -0.271233 1e-08 rheumatoid arthritis 18_69876810 rs2469434 ENSG00000150637.8 CD226 -84993 4.71e-06 -0.271233 2e-06 rheumatoid arthritis 18_69876810 rs2469434 ENSG00000150637.8 CD226 -84993 4.71e-06 -0.271233 2e-06 rheumatoid arthritis 18_69876810 rs2469434 ENSG00000150637.8 CD226 -84993 4.71e-06 -0.271233 9e-10 rheumatoid arthritis 18_75750899 rs1943199 ENSG00000261194.1 LINC01898 38514 1.88e-07 0.731178 2e-08 rheumatoid arthritis 18_79400235 rs56376587 ENSG00000131196.17 NFATC1 4379 3.23e-07 -0.298488 4e-09 rheumatoid arthritis 19_10338682 rs7258015 ENSG00000076662.9 ICAM3 -1141 1.16e-12 -0.553379 3e-08 rheumatoid arthritis 19_10359299 rs12720356 ENSG00000220201.7 ZGLP1 49419 8.36e-07 -0.243987 4e-09 rheumatoid arthritis 19_10359299 rs12720356 ENSG00000267673.6 FDX2 43284 6.21e-06 -0.21523 4e-09 rheumatoid arthritis 19_49618017 rs76246107 ENSG00000104872.10 PIH1D1 164520 6.81e-06 -0.56504 3e-08 rheumatoid arthritis 2_190700031 rs744600 ENSG00000115419.12 GLS -195121 0.000105265 -0.103218 7e-11 rheumatoid arthritis 2_190700031 rs744600 ENSG00000189362.11 NEMP2 165309 2.78e-07 -0.277774 7e-11 rheumatoid arthritis 2_190700031 rs744600 ENSG00000231858.5 STAT4-AS1 -321495 7.79e-05 0.209911 7e-11 rheumatoid arthritis 2_191057148 rs11893432 ENSG00000231858.5 STAT4-AS1 35622 1.46e-06 -0.316758 2e-11 rheumatoid arthritis 2_191068528 rs13426947 ENSG00000231858.5 STAT4-AS1 47002 1.03e-06 -0.32189 8e-09 rheumatoid arthritis 2_191068528 rs13426947 ENSG00000231858.5 STAT4-AS1 47002 1.03e-06 -0.32189 7e-10 rheumatoid arthritis 2_191068528 rs13426947 ENSG00000231858.5 STAT4-AS1 47002 1.03e-06 -0.32189 4e-17 rheumatoid arthritis 2_191068557 rs13389408 ENSG00000231858.5 STAT4-AS1 47031 1.29e-06 -0.429763 3e-17 rheumatoid arthritis 2_191068557 rs13389408 ENSG00000115419.12 GLS 173405 6.52e-05 0.178728 3e-17 rheumatoid arthritis 2_197748584 rs770667 ENSG00000115524.15 SF3B1 313493 3.96e-10 -0.110116 2e-08 rheumatoid arthritis 2_197748584 rs770667 ENSG00000065413.18 ANKRD44 437411 1.06e-09 -0.379951 2e-08 rheumatoid arthritis 2_201196097 rs3731714 ENSG00000155749.12 FLACC1 -161301 4.2e-06 -0.151646 7e-09 rheumatoid arthritis 2_201196097 rs3731714 ENSG00000240344.8 PPIL3 306794 1.42e-05 0.298701 7e-09 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000240344.8 PPIL3 400371 6.71e-11 -0.654073 5e-07 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000064012.21 CASP8 56231 7.38e-08 -0.480148 5e-07 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000155749.12 FLACC1 -67724 2.63e-05 0.206845 5e-07 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000240344.8 PPIL3 400371 6.71e-11 -0.654073 2e-09 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000064012.21 CASP8 56231 7.38e-08 -0.480148 2e-09 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000155749.12 FLACC1 -67724 2.63e-05 0.206845 2e-09 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000240344.8 PPIL3 400371 6.71e-11 -0.654073 3e-07 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000064012.21 CASP8 56231 7.38e-08 -0.480148 3e-07 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000155749.12 FLACC1 -67724 2.63e-05 0.206845 3e-07 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000240344.8 PPIL3 400371 6.71e-11 -0.654073 3e-09 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000064012.21 CASP8 56231 7.38e-08 -0.480148 3e-09 rheumatoid arthritis 2_201289674 rs6715284 ENSG00000155749.12 FLACC1 -67724 2.63e-05 0.206845 3e-09 rheumatoid arthritis 2_203829153 rs231735 ENSG00000163599.14 CTLA4 -38633 8.1e-12 -0.378474 6e-09 rheumatoid arthritis 2_203874196 rs3087243 ENSG00000163599.14 CTLA4 6410 3.09e-15 0.42676 4e-22 rheumatoid arthritis 2_203874196 rs3087243 ENSG00000163599.14 CTLA4 6410 3.09e-15 0.42676 1e-23 rheumatoid arthritis 2_203874196 rs3087243 ENSG00000163599.14 CTLA4 6410 3.09e-15 0.42676 9e-15 rheumatoid arthritis 2_203874196 rs3087243 ENSG00000163599.14 CTLA4 6410 3.09e-15 0.42676 1e-11 rheumatoid arthritis 2_203874196 rs3087243 ENSG00000163599.14 CTLA4 6410 3.09e-15 0.42676 9e-20 rheumatoid arthritis 2_203874196 rs3087243 ENSG00000163599.14 CTLA4 6410 3.09e-15 0.42676 7e-11 rheumatoid arthritis 2_203874196 rs3087243 ENSG00000163599.14 CTLA4 6410 3.09e-15 0.42676 3e-25 rheumatoid arthritis 2_203874196 rs3087243 ENSG00000163599.14 CTLA4 6410 3.09e-15 0.42676 3e-24 rheumatoid arthritis 2_203874196 rs3087243 ENSG00000163599.14 CTLA4 6410 3.09e-15 0.42676 4e-11 rheumatoid arthritis 2_203874196 rs3087243 ENSG00000163599.14 CTLA4 6410 3.09e-15 0.42676 1e-08 rheumatoid arthritis 2_203878211 rs11571302 ENSG00000163599.14 CTLA4 10425 2.11e-15 0.422179 5e-07 rheumatoid arthritis 2_203878211 rs11571302 ENSG00000163599.14 CTLA4 10425 2.11e-15 0.422179 4e-08 rheumatoid arthritis 2_233275771 rs3792109 ENSG00000085978.21 ATG16L1 65720 6.16e-31 0.289104 2e-16 rheumatoid arthritis 2_60841032 rs1432296 ENSG00000162927.13 PUS10 -177129 2.24e-05 0.294856 8e-10 rheumatoid arthritis 2_60841032 rs1432296 ENSG00000212978.6 C2orf74-DT -303937 4.06e-06 0.523498 8e-10 rheumatoid arthritis 2_62225526 rs11900673 ENSG00000170340.10 B3GNT2 29413 1.52e-06 0.238065 1e-08 rheumatoid arthritis 2_62233985 rs13385025 ENSG00000170340.10 B3GNT2 37872 1.14e-05 0.22768 3e-06 rheumatoid arthritis 2_62233985 rs13385025 ENSG00000170340.10 B3GNT2 37872 1.14e-05 0.22768 9e-07 rheumatoid arthritis 2_65368452 rs934734 ENSG00000198369.9 SPRED2 -64185 8.4e-06 -0.152153 2e-08 rheumatoid arthritis 2_65368452 rs934734 ENSG00000198369.9 SPRED2 -64185 8.4e-06 -0.152153 5e-10 rheumatoid arthritis 20_46105671 rs6032662 ENSG00000213820.3 RPL13P2 6153 2.68e-07 0.44468 1e-09 rheumatoid arthritis 20_46105671 rs6032662 ENSG00000101017.13 CD40 -12601 5.3e-09 0.289169 1e-09 rheumatoid arthritis 20_46118343 rs1883832 ENSG00000213820.3 RPL13P2 18825 7.35e-07 0.433223 1e-16 rheumatoid arthritis 20_46118343 rs1883832 ENSG00000101017.13 CD40 71 5.41e-09 0.292013 1e-16 rheumatoid arthritis 20_46118343 rs1883832 ENSG00000213820.3 RPL13P2 18825 7.35e-07 0.433223 2e-13 rheumatoid arthritis 20_46118343 rs1883832 ENSG00000101017.13 CD40 71 5.41e-09 0.292013 2e-13 rheumatoid arthritis 20_46118343 rs1883832 ENSG00000213820.3 RPL13P2 18825 7.35e-07 0.433223 9e-15 rheumatoid arthritis 20_46118343 rs1883832 ENSG00000101017.13 CD40 71 5.41e-09 0.292013 9e-15 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000101017.13 CD40 1036 2.84e-08 0.269957 2e-07 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000213820.3 RPL13P2 19790 6.95e-07 0.420532 2e-07 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000101017.13 CD40 1036 2.84e-08 0.269957 9e-11 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000213820.3 RPL13P2 19790 6.95e-07 0.420532 9e-11 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000101017.13 CD40 1036 2.84e-08 0.269957 3e-09 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000213820.3 RPL13P2 19790 6.95e-07 0.420532 3e-09 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000101017.13 CD40 1036 2.84e-08 0.269957 8e-09 rheumatoid arthritis 20_46119308 rs4810485 ENSG00000213820.3 RPL13P2 19790 6.95e-07 0.420532 8e-09 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000101017.13 CD40 2340 5.62e-08 0.251944 4e-14 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000213820.3 RPL13P2 21094 4.66e-06 0.371021 4e-14 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000101017.13 CD40 2340 5.62e-08 0.251944 3e-14 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000213820.3 RPL13P2 21094 4.66e-06 0.371021 3e-14 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000101017.13 CD40 2340 5.62e-08 0.251944 4e-18 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000213820.3 RPL13P2 21094 4.66e-06 0.371021 4e-18 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000101017.13 CD40 2340 5.62e-08 0.251944 1e-16 rheumatoid arthritis 20_46120612 rs4239702 ENSG00000213820.3 RPL13P2 21094 4.66e-06 0.371021 1e-16 rheumatoid arthritis 21_33391982 rs73194058 ENSG00000142188.16 TMEM50B -88029 1.82e-07 -0.440753 3e-08 rheumatoid arthritis 21_33391982 rs73194058 ENSG00000142188.16 TMEM50B -88029 1.82e-07 -0.440753 1e-06 rheumatoid arthritis 21_33391982 rs73194058 ENSG00000142188.16 TMEM50B -88029 1.82e-07 -0.440753 8e-07 rheumatoid arthritis 21_33391982 rs73194058 ENSG00000142188.16 TMEM50B -88029 1.82e-07 -0.440753 7e-08 rheumatoid arthritis 22_21561877 rs5754100 ENSG00000185651.14 UBE2L3 -5670 1.83e-07 0.178116 9e-09 rheumatoid arthritis 22_21562072 rs5754104 ENSG00000185651.14 UBE2L3 -5475 7.74e-08 0.188399 1e-10 rheumatoid arthritis 22_21602364 rs2283790 ENSG00000185651.14 UBE2L3 34817 7.16e-08 0.183442 2e-11 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000185651.14 UBE2L3 57260 6.82e-08 0.19523 2e-07 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000185651.14 UBE2L3 57260 6.82e-08 0.19523 6e-07 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000185651.14 UBE2L3 57260 6.82e-08 0.19523 1e-09 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000185651.14 UBE2L3 57260 6.82e-08 0.19523 4e-06 rheumatoid arthritis 22_21624807 rs11089637 ENSG00000185651.14 UBE2L3 57260 6.82e-08 0.19523 2e-09 rheumatoid arthritis 22_21625000 rs4821124 ENSG00000185651.14 UBE2L3 57453 6.76e-08 0.184275 2e-11 rheumatoid arthritis 22_21630805 rs5754467 ENSG00000185651.14 UBE2L3 63258 1.34e-05 0.148708 1e-13 rheumatoid arthritis 22_30174033 rs1003342 ENSG00000184117.11 NIPSNAP1 592696 7.29e-05 0.102433 6e-10 rheumatoid arthritis 22_30174033 rs1003342 ENSG00000100325.14 ASCC2 335729 3.85e-15 0.30317 6e-10 rheumatoid arthritis 22_30285268 rs1043099 ENSG00000187860.10 CCDC157 -71367 3.39e-06 -0.16403 7e-09 rheumatoid arthritis 22_39351666 rs909685 ENSG00000100321.14 SYNGR1 1741 1.33e-21 0.448439 3e-09 rheumatoid arthritis 22_39351666 rs909685 ENSG00000100321.14 SYNGR1 1741 1.33e-21 0.448439 4e-06 rheumatoid arthritis 22_39351666 rs909685 ENSG00000100321.14 SYNGR1 1741 1.33e-21 0.448439 1e-16 rheumatoid arthritis 22_39351666 rs909685 ENSG00000100321.14 SYNGR1 1741 1.33e-21 0.448439 4e-14 rheumatoid arthritis 22_39351666 rs909685 ENSG00000100321.14 SYNGR1 1741 1.33e-21 0.448439 3e-10 rheumatoid arthritis 22_39351666 rs909685 ENSG00000100321.14 SYNGR1 1741 1.33e-21 0.448439 6e-12 rheumatoid arthritis 22_39351666 rs909685 ENSG00000100321.14 SYNGR1 1741 1.33e-21 0.448439 2e-07 rheumatoid arthritis 22_39351775 rs2069235 ENSG00000100321.14 SYNGR1 1850 1.33e-21 0.448439 2e-20 rheumatoid arthritis 22_39353976 rs5757628 ENSG00000100321.14 SYNGR1 4051 6.08e-35 0.597973 8e-10 rheumatoid arthritis 22_39360645 rs2049985 ENSG00000100321.14 SYNGR1 10720 6.08e-35 0.597973 4e-09 rheumatoid arthritis 3_160712081 rs7624766 ENSG00000169251.12 NMD3 -392615 1.52e-06 -0.15085 4e-07 rheumatoid arthritis 3_160712081 rs7624766 ENSG00000244009.1 B3GAT3P1 259483 2.8e-06 -0.302881 4e-07 rheumatoid arthritis 3_160712081 rs7624766 ENSG00000243838.1 PSMC1P7 -618157 1.86e-05 0.160511 4e-07 rheumatoid arthritis 3_160712081 rs7624766 ENSG00000169255.13 B3GALNT1 -393303 0.00012136 -0.154379 4e-07 rheumatoid arthritis 3_49660026 rs9836291 ENSG00000187492.8 CDHR4 -139809 2.52e-10 -0.367077 6e-06 rheumatoid arthritis 3_49660026 rs9836291 ENSG00000004534.14 RBM6 -279981 3.19e-08 0.207997 6e-06 rheumatoid arthritis 3_49660026 rs9836291 ENSG00000068745.14 IP6K2 919673 0.000151549 -0.124439 6e-06 rheumatoid arthritis 3_49674864 rs11130213 ENSG00000004534.14 RBM6 -265143 9.16e-08 0.202176 5e-07 rheumatoid arthritis 3_49674864 rs11130213 ENSG00000187492.8 CDHR4 -124971 7e-11 -0.379165 5e-07 rheumatoid arthritis 3_49674864 rs11130213 ENSG00000068745.14 IP6K2 934511 0.000211261 -0.122297 5e-07 rheumatoid arthritis 3_58317208 rs73081554 ENSG00000168291.12 PDHB -116649 9e-06 -0.384979 5e-08 rheumatoid arthritis 3_58317208 rs73081554 ENSG00000168291.12 PDHB -116649 9e-06 -0.384979 1e-08 rheumatoid arthritis 3_58317208 rs73081554 ENSG00000168291.12 PDHB -116649 9e-06 -0.384979 5e-08 rheumatoid arthritis 4_25415622 rs3816587 ENSG00000168228.14 ZCCHC4 102837 2.25e-05 -0.137608 9e-06 rheumatoid arthritis 4_48218822 rs2664035 ENSG00000163293.11 NIPAL1 304616 0.000172111 -0.264133 4e-06 rheumatoid arthritis 4_48218822 rs2664035 ENSG00000163293.11 NIPAL1 304616 0.000172111 -0.264133 1e-07 rheumatoid arthritis 4_48218822 rs2664035 ENSG00000163293.11 NIPAL1 304616 0.000172111 -0.264133 3e-08 rheumatoid arthritis 4_48218822 rs2664035 ENSG00000163293.11 NIPAL1 304616 0.000172111 -0.264133 2e-06 rheumatoid arthritis 4_971932 rs13101828 ENSG00000145214.13 DGKQ -14963 1.1e-28 0.467376 1e-08 rheumatoid arthritis 4_971932 rs13101828 ENSG00000145217.13 SLC26A1 -21508 6.96e-08 -0.293739 1e-08 rheumatoid arthritis 5_132094425 rs657075 ENSG00000237714.1 P4HA2-AS1 -90451 0.000209836 0.309976 3e-10 rheumatoid arthritis 5_132094425 rs657075 ENSG00000131435.12 PDLIM4 -163246 3.14e-05 -0.319738 3e-10 rheumatoid arthritis 5_132094425 rs657075 ENSG00000237714.1 P4HA2-AS1 -90451 0.000209836 0.309976 8e-07 rheumatoid arthritis 5_132094425 rs657075 ENSG00000131435.12 PDLIM4 -163246 3.14e-05 -0.319738 8e-07 rheumatoid arthritis 5_132094425 rs657075 ENSG00000237714.1 P4HA2-AS1 -90451 0.000209836 0.309976 1e-06 rheumatoid arthritis 5_132094425 rs657075 ENSG00000131435.12 PDLIM4 -163246 3.14e-05 -0.319738 1e-06 rheumatoid arthritis 5_132094425 rs657075 ENSG00000237714.1 P4HA2-AS1 -90451 0.000209836 0.309976 8e-06 rheumatoid arthritis 5_132094425 rs657075 ENSG00000131435.12 PDLIM4 -163246 3.14e-05 -0.319738 8e-06 rheumatoid arthritis 5_132094425 rs657075 ENSG00000237714.1 P4HA2-AS1 -90451 0.000209836 0.309976 6e-06 rheumatoid arthritis 5_132094425 rs657075 ENSG00000131435.12 PDLIM4 -163246 3.14e-05 -0.319738 6e-06 rheumatoid arthritis 5_132461855 rs6894249 ENSG00000072682.18 P4HA2 166540 3.92e-09 -0.236318 1e-14 rheumatoid arthritis 5_150858959 rs147018773 ENSG00000197083.11 ZNF300P1 -87330 7.62e-23 1.21036 2e-09 rheumatoid arthritis 5_150858959 rs147018773 ENSG00000237693.4 IRGM 12436 2.56e-05 0.531634 2e-09 rheumatoid arthritis 5_150858959 rs147018773 ENSG00000145908.12 ZNF300 -46024 2.8e-15 0.666768 2e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000234745.10 29110 2.47e-11 0.660585 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000237775.1 DDR1-DT 509634 3.71e-09 0.706493 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204444.10 APOM -269919 2.75e-05 -0.208391 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000244731.7 C4A -596472 2.06e-18 -0.939464 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204516.9 MICB -109329 2.9e-06 0.455327 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204338.8 CYP21A1P -620137 1.44e-16 -0.973192 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000248290.1 TNXA -626920 3.99e-05 -0.567231 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000250535.1 STK19B -627718 8.43e-07 -0.718122 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000224389.8 C4B -629210 5.06e-06 0.461962 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000230174.1 LINC01149 -56115 2.21e-05 0.223687 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204296.11 TSBP1 -986360 1e-07 -0.186481 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204525.16 HLA-C 113447 6.72e-11 0.584827 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000204536.13 CCHCR1 227314 0.000141598 -0.344247 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000240053.8 LY6G5B -284615 3.32e-06 0.321614 9e-09 rheumatoid arthritis 6_31385552 rs2596565 ENSG00000231852.6 CYP21A2 -652713 9.23e-05 0.472698 9e-09 rheumatoid arthritis 6_31654829 rs805297 ENSG00000204338.8 CYP21A1P -350860 6.92e-09 0.430469 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000204528.3 PSORS1C3 476930 9.27e-05 0.352384 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000204371.11 EHMT2 -242855 0.000180754 -0.242452 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000166278.14 C2 -242956 1.02e-05 0.224819 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000234745.10 HLA-B 298387 5.06e-05 -0.251593 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000204540.10 PSORS1C1 540079 0.000165219 0.186451 3e-10 rheumatoid arthritis 6_31654829 rs805297 ENSG00000230622.1 UQCRHP1 43473 1.25e-06 0.32351 3e-10 rheumatoid arthritis 6_32251212 rs9296015 ENSG00000237285.1 HNRNPA1P2 -74007 3.64e-06 -0.333957 2e-38 rheumatoid arthritis 6_32315077 rs6910071 ENSG00000237541.3 HLA-DQA2 -426265 5.74e-06 0.440117 1e-299 rheumatoid arthritis 6_32315077 rs6910071 ENSG00000204296.11 TSBP1 -56835 1.27e-05 0.106576 1e-299 rheumatoid arthritis 6_32315077 rs6910071 ENSG00000204301.6 NOTCH4 91010 7e-05 0.239979 1e-299 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000237285.1 HNRNPA1P2 82977 1.51e-06 0.337293 2e-124 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000204338.8 CYP21A1P 402507 6.53e-07 0.403261 2e-124 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000229391.7 HLA-DRB6 -151826 1.97e-10 0.485075 2e-124 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000250535.1 STK19B 394926 7.71e-05 0.384266 2e-124 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000196126.11 HLA-DRB1 -181652 5.8e-08 -0.38713 2e-124 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000204296.11 TSBP1 36284 2.21e-07 0.120138 2e-124 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000237541.3 HLA-DQA2 -333146 9.34e-20 0.798076 2e-124 rheumatoid arthritis 6_32408196 rs3763309 ENSG00000232629.8 HLA-DQB2 -355338 3.76e-07 0.469924 2e-124 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000229391.7 HLA-DRB6 -138494 1.01e-05 0.293414 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000250535.1 STK19B 408258 3.08e-05 0.345814 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000198502.5 HLA-DRB5 -108759 4.56e-08 -0.433511 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000196735.11 HLA-DQA1 -206651 0.000145914 -0.215489 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000223534.1 HLA-DQB1-AS1 -238827 8.26e-05 -0.257889 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000204338.8 CYP21A1P 415839 2.02e-06 0.32996 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000237541.3 HLA-DQA2 -319814 9.6e-08 0.420325 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000240053.8 LY6G5B 751361 1.16e-05 -0.171918 3e-10 rheumatoid arthritis 6_32421528 rs9268557 ENSG00000196126.11 HLA-DRB1 -168320 9.8e-12 -0.409087 3e-10 rheumatoid arthritis 6_32446496 rs3129890 ENSG00000237541.3 HLA-DQA2 -294846 4.25e-05 -0.383408 1e-10 rheumatoid arthritis 6_32446496 rs3129890 ENSG00000225914.1 TSBP1-AS1 190785 0.000115565 0.367878 1e-10 rheumatoid arthritis 6_32446496 rs3129890 ENSG00000204338.8 CYP21A1P 440807 3.11e-08 -0.448671 1e-10 rheumatoid arthritis 6_32446496 rs3129890 ENSG00000250535.1 STK19B 433226 1.14e-07 -0.512321 1e-10 rheumatoid arthritis 6_32446496 rs3129890 ENSG00000244731.7 C4A 464472 5.56e-07 -0.37437 1e-10 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000198502.5 HLA-DRB5 -82984 1.43e-05 -0.462908 2e-09 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000225914.1 TSBP1-AS1 191592 0.000115944 0.416625 2e-09 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000204410.14 MSH5 707355 0.000157875 -0.150095 2e-09 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000204338.8 CYP21A1P 441614 2.6e-11 -0.604483 2e-09 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000248290.1 TNXA 434831 2.19e-05 -0.441021 2e-09 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000250535.1 STK19B 434033 7.17e-06 -0.494843 2e-09 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000244731.7 C4A 465279 2.65e-12 -0.579778 2e-09 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000237541.3 HLA-DQA2 -294039 4.74e-09 -0.611333 2e-09 rheumatoid arthritis 6_32447303 rs3129891 ENSG00000231852.6 CYP21A2 409038 0.00011241 0.351805 2e-09 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196735.11 HLA-DQA1 -167184 7.38e-08 -0.289822 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 3.75e-07 -0.317191 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000240053.8 LY6G5B 790828 0.00014103 -0.144175 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000250535.1 STK19B 447725 1.37e-09 0.47512 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 8.37e-21 0.562239 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000204296.11 TSBP1 89083 3.09e-05 0.0801753 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000204338.8 CYP21A1P 455306 6.41e-07 0.331926 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 2.68e-15 0.580913 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 7.33e-16 -0.458293 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196735.11 HLA-DQA1 -167184 7.38e-08 -0.289822 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 3.75e-07 -0.317191 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000240053.8 LY6G5B 790828 0.00014103 -0.144175 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000250535.1 STK19B 447725 1.37e-09 0.47512 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 8.37e-21 0.562239 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000204296.11 TSBP1 89083 3.09e-05 0.0801753 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000204338.8 CYP21A1P 455306 6.41e-07 0.331926 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 2.68e-15 0.580913 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 7.33e-16 -0.458293 2e-145 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196735.11 HLA-DQA1 -167184 7.38e-08 -0.289822 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 3.75e-07 -0.317191 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000240053.8 LY6G5B 790828 0.00014103 -0.144175 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000250535.1 STK19B 447725 1.37e-09 0.47512 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 8.37e-21 0.562239 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000204296.11 TSBP1 89083 3.09e-05 0.0801753 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000204338.8 CYP21A1P 455306 6.41e-07 0.331926 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 2.68e-15 0.580913 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 7.33e-16 -0.458293 3e-07 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196735.11 HLA-DQA1 -167184 7.38e-08 -0.289822 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 3.75e-07 -0.317191 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000240053.8 LY6G5B 790828 0.00014103 -0.144175 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000250535.1 STK19B 447725 1.37e-09 0.47512 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 8.37e-21 0.562239 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000204296.11 TSBP1 89083 3.09e-05 0.0801753 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000204338.8 CYP21A1P 455306 6.41e-07 0.331926 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 2.68e-15 0.580913 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 7.33e-16 -0.458293 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196735.11 HLA-DQA1 -167184 7.38e-08 -0.289822 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 3.75e-07 -0.317191 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000240053.8 LY6G5B 790828 0.00014103 -0.144175 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000250535.1 STK19B 447725 1.37e-09 0.47512 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 8.37e-21 0.562239 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000204296.11 TSBP1 89083 3.09e-05 0.0801753 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000204338.8 CYP21A1P 455306 6.41e-07 0.331926 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 2.68e-15 0.580913 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 7.33e-16 -0.458293 4e-134 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196735.11 HLA-DQA1 -167184 7.38e-08 -0.289822 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 3.75e-07 -0.317191 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000240053.8 LY6G5B 790828 0.00014103 -0.144175 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000250535.1 STK19B 447725 1.37e-09 0.47512 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 8.37e-21 0.562239 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000204296.11 TSBP1 89083 3.09e-05 0.0801753 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000204338.8 CYP21A1P 455306 6.41e-07 0.331926 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 2.68e-15 0.580913 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 7.33e-16 -0.458293 1e-250 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196735.11 HLA-DQA1 -167184 7.38e-08 -0.289822 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000223534.1 HLA-DQB1-AS1 -199360 3.75e-07 -0.317191 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000240053.8 LY6G5B 790828 0.00014103 -0.144175 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000250535.1 STK19B 447725 1.37e-09 0.47512 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000229391.7 HLA-DRB6 -99027 8.37e-21 0.562239 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000204296.11 TSBP1 89083 3.09e-05 0.0801753 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000204338.8 CYP21A1P 455306 6.41e-07 0.331926 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000237541.3 HLA-DQA2 -280347 2.68e-15 0.580913 1e-100 rheumatoid arthritis 6_32460995 rs9268839 ENSG00000196126.11 HLA-DRB1 -128853 7.33e-16 -0.458293 1e-100 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000196126.11 HLA-DRB1 -113427 2.44e-16 -0.464384 5e-58 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000204296.11 TSBP1 104509 7.07e-05 0.0764859 5e-58 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000196735.11 HLA-DQA1 -151758 4.59e-08 -0.29377 5e-58 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000223534.1 HLA-DQB1-AS1 -183934 5.19e-07 -0.3131 5e-58 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000204338.8 CYP21A1P 470732 4.6e-07 0.335558 5e-58 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000237541.3 HLA-DQA2 -264921 8.91e-15 0.570338 5e-58 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000250535.1 STK19B 463151 1.77e-09 0.471499 5e-58 rheumatoid arthritis 6_32476421 rs12194148 ENSG00000229391.7 HLA-DRB6 -83601 1.26e-20 0.559358 5e-58 rheumatoid arthritis 6_32486159 rs112062732 ENSG00000250535.1 STK19B 472889 2.83e-10 0.510097 6e-227 rheumatoid arthritis 6_32486159 rs112062732 ENSG00000196735.11 HLA-DQA1 -142020 3.07e-06 -0.261591 6e-227 rheumatoid arthritis 6_32486159 rs112062732 ENSG00000196126.11 HLA-DRB1 -103689 2.05e-14 -0.452095 6e-227 rheumatoid arthritis 6_32486159 rs112062732 ENSG00000237541.3 HLA-DQA2 -255183 1.38e-12 0.544583 6e-227 rheumatoid arthritis 6_32486159 rs112062732 ENSG00000204338.8 CYP21A1P 480470 4.46e-06 0.317496 6e-227 rheumatoid arthritis 6_32486159 rs112062732 ENSG00000229391.7 HLA-DRB6 -73863 5.03e-17 0.529285 6e-227 rheumatoid arthritis 6_32486159 rs112062732 ENSG00000223534.1 HLA-DQB1-AS1 -174196 8.98e-06 -0.288276 6e-227 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000244731.7 C4A 551343 4.56e-08 -0.34019 9e-52 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000179344.16 HLA-DQB1 -135016 6.53e-08 -0.403921 9e-52 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000198502.5 HLA-DRB5 3080 3.14e-20 -0.682994 9e-52 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000237541.3 HLA-DQA2 -207975 1.19e-07 -0.410133 9e-52 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000241106.6 HLA-DOB -283681 8.04e-05 -0.294194 9e-52 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000204338.8 CYP21A1P 527678 0.000120115 -0.264347 9e-52 rheumatoid arthritis 6_32533367 rs2157337 ENSG00000168394.10 TAP1 -320611 4.8e-07 -0.19763 9e-52 rheumatoid arthritis 6_32593593 rs35139284 ENSG00000240053.8 LY6G5B 923426 0.000164046 -0.162054 4e-287 rheumatoid arthritis 6_32593593 rs35139284 ENSG00000196126.11 HLA-DRB1 3745 1e-05 -0.296924 4e-287 rheumatoid arthritis 6_32593593 rs35139284 ENSG00000237541.3 HLA-DQA2 -147749 4.11e-08 0.471264 4e-287 rheumatoid arthritis 6_32593593 rs35139284 ENSG00000223534.1 HLA-DQB1-AS1 -66762 0.000147268 -0.271757 4e-287 rheumatoid arthritis 6_32593593 rs35139284 ENSG00000204338.8 CYP21A1P 587904 1.19e-05 0.333083 4e-287 rheumatoid arthritis 6_32606394 rs615672 ENSG00000204267.13 TAP2 -232386 6.84e-06 -0.14734 8e-27 rheumatoid arthritis 6_32606394 rs615672 ENSG00000168394.10 TAP1 -247584 1.26e-10 -0.250192 8e-27 rheumatoid arthritis 6_32606394 rs615672 ENSG00000179344.16 HLA-DQB1 -61989 2.96e-10 -0.469063 8e-27 rheumatoid arthritis 6_32606394 rs615672 ENSG00000198502.5 HLA-DRB5 76107 3.95e-11 -0.511003 8e-27 rheumatoid arthritis 6_32606394 rs615672 ENSG00000244731.7 C4A 624370 5.62e-09 -0.363225 8e-27 rheumatoid arthritis 6_32606394 rs615672 ENSG00000204338.8 CYP21A1P 600705 1.41e-05 -0.29898 8e-27 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 3.22e-34 1.00518 2e-08 rheumatoid arthritis 6_32609603 rs660895 ENSG00000229391.7 HLA-DRB6 49581 1.13e-09 0.463291 2e-08 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237285.1 HNRNPA1P2 284384 9.91e-05 0.273565 2e-08 rheumatoid arthritis 6_32609603 rs660895 ENSG00000232629.8 HLA-DQB2 -153931 1.08e-11 0.613734 2e-08 rheumatoid arthritis 6_32609603 rs660895 ENSG00000204338.8 CYP21A1P 603914 8.64e-05 0.319352 2e-08 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 3.22e-34 1.00518 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000229391.7 HLA-DRB6 49581 1.13e-09 0.463291 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237285.1 HNRNPA1P2 284384 9.91e-05 0.273565 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000232629.8 HLA-DQB2 -153931 1.08e-11 0.613734 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000204338.8 CYP21A1P 603914 8.64e-05 0.319352 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 3.22e-34 1.00518 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000229391.7 HLA-DRB6 49581 1.13e-09 0.463291 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237285.1 HNRNPA1P2 284384 9.91e-05 0.273565 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000232629.8 HLA-DQB2 -153931 1.08e-11 0.613734 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000204338.8 CYP21A1P 603914 8.64e-05 0.319352 1e-300 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237541.3 HLA-DQA2 -131739 3.22e-34 1.00518 1e-108 rheumatoid arthritis 6_32609603 rs660895 ENSG00000229391.7 HLA-DRB6 49581 1.13e-09 0.463291 1e-108 rheumatoid arthritis 6_32609603 rs660895 ENSG00000237285.1 HNRNPA1P2 284384 9.91e-05 0.273565 1e-108 rheumatoid arthritis 6_32609603 rs660895 ENSG00000232629.8 HLA-DQB2 -153931 1.08e-11 0.613734 1e-108 rheumatoid arthritis 6_32609603 rs660895 ENSG00000204338.8 CYP21A1P 603914 8.64e-05 0.319352 1e-108 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000232629.8 HLA-DQB2 -148661 2.49e-09 0.616619 5e-21 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000196126.11 HLA-DRB1 25025 7.46e-06 -0.363841 5e-21 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000196735.11 HLA-DQA1 -13306 1.74e-05 -0.320405 5e-21 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000229391.7 HLA-DRB6 54851 1.71e-12 0.601711 5e-21 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000237541.3 HLA-DQA2 -126469 7.27e-31 1.09383 5e-21 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000204338.8 CYP21A1P 609184 8.43e-06 0.409198 5e-21 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000232629.8 HLA-DQB2 -148661 2.49e-09 0.616619 2e-10 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000196126.11 HLA-DRB1 25025 7.46e-06 -0.363841 2e-10 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000196735.11 HLA-DQA1 -13306 1.74e-05 -0.320405 2e-10 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000229391.7 HLA-DRB6 54851 1.71e-12 0.601711 2e-10 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000237541.3 HLA-DQA2 -126469 7.27e-31 1.09383 2e-10 rheumatoid arthritis 6_32614873 rs3104413 ENSG00000204338.8 CYP21A1P 609184 8.43e-06 0.409198 2e-10 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000232629.8 HLA-DQB2 -147954 2.49e-09 0.616619 2e-10 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000229391.7 HLA-DRB6 55558 1.71e-12 0.601711 2e-10 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000204338.8 CYP21A1P 609891 8.43e-06 0.409198 2e-10 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000196126.11 HLA-DRB1 25732 7.46e-06 -0.363841 2e-10 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000237541.3 HLA-DQA2 -125762 7.27e-31 1.09383 2e-10 rheumatoid arthritis 6_32615580 rs6931277 ENSG00000196735.11 HLA-DQA1 -12599 1.74e-05 -0.320405 2e-10 rheumatoid arthritis 6_32615965 rs9271348 ENSG00000168394.10 TAP1 -238013 6.08e-08 -0.24547 5e-07 rheumatoid arthritis 6_32615965 rs9271348 ENSG00000196126.11 HLA-DRB1 26117 5.27e-09 -0.403847 5e-07 rheumatoid arthritis 6_32615965 rs9271348 ENSG00000223534.1 HLA-DQB1-AS1 -44390 1.27e-08 -0.417821 5e-07 rheumatoid arthritis 6_32615965 rs9271348 ENSG00000198502.5 HLA-DRB5 85678 8.61e-33 -0.974355 5e-07 rheumatoid arthritis 6_32615965 rs9271348 ENSG00000241106.6 HLA-DOB -201083 2.34e-06 -0.40562 5e-07 rheumatoid arthritis 6_32615965 rs9271348 ENSG00000179344.16 HLA-DQB1 -52418 2.66e-06 -0.409399 5e-07 rheumatoid arthritis 6_32615965 rs9271348 ENSG00000248290.1 TNXA 603493 4.34e-06 -0.406854 5e-07 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000229391.7 HLA-DRB6 69223 1.71e-12 0.601711 3e-11 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000204338.8 CYP21A1P 623556 8.43e-06 0.409198 3e-11 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000237541.3 HLA-DQA2 -112097 7.27e-31 1.09383 3e-11 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000196126.11 HLA-DRB1 39397 7.46e-06 -0.363841 3e-11 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000232629.8 HLA-DQB2 -134289 2.49e-09 0.616619 3e-11 rheumatoid arthritis 6_32629245 rs3129769 ENSG00000196735.11 HLA-DQA1 1066 1.74e-05 -0.320405 3e-11 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000223534.1 HLA-DQB1-AS1 35719 4.98e-11 -0.396505 5e-75 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000229391.7 HLA-DRB6 136052 4.89e-05 0.255648 5e-75 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000237541.3 HLA-DQA2 -45268 6.03e-15 0.564008 5e-75 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000204338.8 CYP21A1P 690385 1.05e-07 0.347112 5e-75 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000196126.11 HLA-DRB1 106226 8.75e-06 -0.258597 5e-75 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000223534.1 HLA-DQB1-AS1 35719 4.98e-11 -0.396505 1e-09 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000229391.7 HLA-DRB6 136052 4.89e-05 0.255648 1e-09 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000237541.3 HLA-DQA2 -45268 6.03e-15 0.564008 1e-09 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000204338.8 CYP21A1P 690385 1.05e-07 0.347112 1e-09 rheumatoid arthritis 6_32696074 rs6457617 ENSG00000196126.11 HLA-DRB1 106226 8.75e-06 -0.258597 1e-09 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000223534.1 HLA-DQB1-AS1 35867 4.98e-11 -0.396505 4e-186 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000196126.11 HLA-DRB1 106374 8.75e-06 -0.258597 4e-186 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000229391.7 HLA-DRB6 136200 4.89e-05 0.255648 4e-186 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000237541.3 HLA-DQA2 -45120 6.03e-15 0.564008 4e-186 rheumatoid arthritis 6_32696222 rs6457620 ENSG00000204338.8 CYP21A1P 690533 1.05e-07 0.347112 4e-186 rheumatoid arthritis 6_32699330 rs9275334 ENSG00000196735.11 HLA-DQA1 71151 7.92e-05 -0.369657 2e-06 rheumatoid arthritis 6_32699330 rs9275334 ENSG00000196126.11 HLA-DRB1 109482 2.92e-05 -0.426117 2e-06 rheumatoid arthritis 6_32699330 rs9275334 ENSG00000229391.7 HLA-DRB6 139308 1.08e-08 0.620277 2e-06 rheumatoid arthritis 6_32699330 rs9275334 ENSG00000237541.3 HLA-DQA2 -42012 1.08e-15 1.01042 2e-06 rheumatoid arthritis 6_32699330 rs9275334 ENSG00000204338.8 CYP21A1P 693641 1.57e-05 0.497413 2e-06 rheumatoid arthritis 6_32702178 rs9275406 ENSG00000223534.1 HLA-DQB1-AS1 41823 9.02e-06 -0.323681 3e-12 rheumatoid arthritis 6_32703201 rs9275428 ENSG00000223534.1 HLA-DQB1-AS1 42846 9.02e-06 -0.323681 2e-24 rheumatoid arthritis 6_32703326 rs13192471 ENSG00000232629.8 HLA-DQB2 -60208 4.86e-05 -0.428447 2e-58 rheumatoid arthritis 6_32703326 rs13192471 ENSG00000179344.16 HLA-DQB1 34943 1.57e-05 0.438716 2e-58 rheumatoid arthritis 6_32705797 rs9275495 ENSG00000204338.8 CYP21A1P 700108 1.57e-05 0.497413 2e-06 rheumatoid arthritis 6_32705797 rs9275495 ENSG00000196126.11 HLA-DRB1 115949 2.92e-05 -0.426117 2e-06 rheumatoid arthritis 6_32705797 rs9275495 ENSG00000237541.3 HLA-DQA2 -35545 1.08e-15 1.01042 2e-06 rheumatoid arthritis 6_32705797 rs9275495 ENSG00000196735.11 HLA-DQA1 77618 7.92e-05 -0.369657 2e-06 rheumatoid arthritis 6_32705797 rs9275495 ENSG00000229391.7 HLA-DRB6 145775 1.08e-08 0.620277 2e-06 rheumatoid arthritis 6_32707746 rs9275530 ENSG00000204338.8 CYP21A1P 702057 1.57e-05 0.497413 2e-06 rheumatoid arthritis 6_32707746 rs9275530 ENSG00000196735.11 HLA-DQA1 79567 7.92e-05 -0.369657 2e-06 rheumatoid arthritis 6_32707746 rs9275530 ENSG00000237541.3 HLA-DQA2 -33596 1.08e-15 1.01042 2e-06 rheumatoid arthritis 6_32707746 rs9275530 ENSG00000229391.7 HLA-DRB6 147724 1.08e-08 0.620277 2e-06 rheumatoid arthritis 6_32707746 rs9275530 ENSG00000196126.11 HLA-DRB1 117898 2.92e-05 -0.426117 2e-06 rheumatoid arthritis 6_32707857 rs9275532 ENSG00000237541.3 HLA-DQA2 -33485 1.08e-15 1.01042 5e-06 rheumatoid arthritis 6_32707857 rs9275532 ENSG00000204338.8 CYP21A1P 702168 1.57e-05 0.497413 5e-06 rheumatoid arthritis 6_32707857 rs9275532 ENSG00000196735.11 HLA-DQA1 79678 7.92e-05 -0.369657 5e-06 rheumatoid arthritis 6_32707857 rs9275532 ENSG00000196126.11 HLA-DRB1 118009 2.92e-05 -0.426117 5e-06 rheumatoid arthritis 6_32707857 rs9275532 ENSG00000229391.7 HLA-DRB6 147835 1.08e-08 0.620277 5e-06 rheumatoid arthritis 6_32713151 rs7765379 ENSG00000232629.8 HLA-DQB2 -50383 5.7e-09 0.747733 5e-23 rheumatoid arthritis 6_32713151 rs7765379 ENSG00000237541.3 HLA-DQA2 -28191 3.61e-08 0.708613 5e-23 rheumatoid arthritis 6_32713706 rs7454108 ENSG00000204338.8 CYP21A1P 708017 1.57e-05 0.497413 2e-06 rheumatoid arthritis 6_32713706 rs7454108 ENSG00000229391.7 HLA-DRB6 153684 1.08e-08 0.620277 2e-06 rheumatoid arthritis 6_32713706 rs7454108 ENSG00000237541.3 HLA-DQA2 -27636 1.08e-15 1.01042 2e-06 rheumatoid arthritis 6_32713706 rs7454108 ENSG00000196126.11 HLA-DRB1 123858 2.92e-05 -0.426117 2e-06 rheumatoid arthritis 6_32713706 rs7454108 ENSG00000196735.11 HLA-DQA1 85527 7.92e-05 -0.369657 2e-06 rheumatoid arthritis 6_32713753 rs3957146 ENSG00000196126.11 HLA-DRB1 123905 2.92e-05 -0.426117 1e-06 rheumatoid arthritis 6_32713753 rs3957146 ENSG00000229391.7 HLA-DRB6 153731 1.08e-08 0.620277 1e-06 rheumatoid arthritis 6_32713753 rs3957146 ENSG00000196735.11 HLA-DQA1 85574 7.92e-05 -0.369657 1e-06 rheumatoid arthritis 6_32713753 rs3957146 ENSG00000204338.8 CYP21A1P 708064 1.57e-05 0.497413 1e-06 rheumatoid arthritis 6_32713753 rs3957146 ENSG00000237541.3 HLA-DQA2 -27589 1.08e-15 1.01042 1e-06 rheumatoid arthritis 6_32714242 rs3998159 ENSG00000204338.8 CYP21A1P 708553 1.57e-05 0.497413 2e-06 rheumatoid arthritis 6_32714242 rs3998159 ENSG00000229391.7 HLA-DRB6 154220 1.08e-08 0.620277 2e-06 rheumatoid arthritis 6_32714242 rs3998159 ENSG00000237541.3 HLA-DQA2 -27100 1.08e-15 1.01042 2e-06 rheumatoid arthritis 6_32714242 rs3998159 ENSG00000196735.11 HLA-DQA1 86063 7.92e-05 -0.369657 2e-06 rheumatoid arthritis 6_32714242 rs3998159 ENSG00000196126.11 HLA-DRB1 124394 2.92e-05 -0.426117 2e-06 rheumatoid arthritis 6_36387877 rs2234067 ENSG00000224666.3 ETV7-AS1 1046 4.17e-10 0.641187 4e-08 rheumatoid arthritis 6_36387877 rs2234067 ENSG00000224666.3 ETV7-AS1 1046 4.17e-10 0.641187 2e-09 rheumatoid arthritis 6_44261078 rs28362859 ENSG00000146221.9 TCTE1 -36610 7.44e-05 0.19289 4e-12 rheumatoid arthritis 6_44261078 rs28362859 ENSG00000146221.9 TCTE1 -36610 7.44e-05 0.19289 1e-12 rheumatoid arthritis 7_128933913 rs4728142 ENSG00000064419.13 TNPO3 -121260 3.62e-05 0.123777 5e-12 rheumatoid arthritis 7_128933913 rs4728142 ENSG00000064419.13 TNPO3 -121260 3.62e-05 0.123777 7e-10 rheumatoid arthritis 7_128936032 rs3757387 ENSG00000064419.13 TNPO3 -119141 6.16e-06 0.132536 5e-09 rheumatoid arthritis 7_128936032 rs3757387 ENSG00000128604.19 IRF5 -1580 1.26e-05 0.213911 5e-09 rheumatoid arthritis 7_128936032 rs3757387 ENSG00000064419.13 TNPO3 -119141 6.16e-06 0.132536 2e-19 rheumatoid arthritis 7_128936032 rs3757387 ENSG00000128604.19 IRF5 -1580 1.26e-05 0.213911 2e-19 rheumatoid arthritis 7_128939988 rs3778753 ENSG00000064419.13 TNPO3 -115185 1.21e-05 0.127345 3e-14 rheumatoid arthritis 7_128939988 rs3778753 ENSG00000128604.19 IRF5 2376 1.95e-06 0.230295 3e-14 rheumatoid arthritis 7_128939988 rs3778753 ENSG00000242902.1 FLNC-AS1 77362 0.000137741 -0.317245 3e-14 rheumatoid arthritis 7_128939988 rs3778753 ENSG00000064419.13 TNPO3 -115185 1.21e-05 0.127345 4e-12 rheumatoid arthritis 7_128939988 rs3778753 ENSG00000128604.19 IRF5 2376 1.95e-06 0.230295 4e-12 rheumatoid arthritis 7_128939988 rs3778753 ENSG00000242902.1 FLNC-AS1 77362 0.000137741 -0.317245 4e-12 rheumatoid arthritis 7_128940626 rs3807306 ENSG00000128604.19 IRF5 3014 1.56e-06 0.229645 3e-07 rheumatoid arthritis 7_128940626 rs3807306 ENSG00000064419.13 TNPO3 -114547 1.46e-05 0.124668 3e-07 rheumatoid arthritis 7_128940626 rs3807306 ENSG00000128604.19 IRF5 3014 1.56e-06 0.229645 5e-10 rheumatoid arthritis 7_128940626 rs3807306 ENSG00000064419.13 TNPO3 -114547 1.46e-05 0.124668 5e-10 rheumatoid arthritis 7_128940626 rs3807306 ENSG00000128604.19 IRF5 3014 1.56e-06 0.229645 7e-10 rheumatoid arthritis 7_128940626 rs3807306 ENSG00000064419.13 TNPO3 -114547 1.46e-05 0.124668 7e-10 rheumatoid arthritis 7_128949579 rs10954214 ENSG00000064419.13 TNPO3 -105594 1.58e-05 0.123406 7e-17 rheumatoid arthritis 7_130322574 rs2306848 ENSG00000128510.10 CPA4 29440 4.87e-05 -0.601366 6e-12 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000234336.6 JAZF1-AS1 -44955 3.03e-13 -0.443893 2e-06 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000234336.6 JAZF1-AS1 -44955 3.03e-13 -0.443893 3e-09 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000234336.6 JAZF1-AS1 -44955 3.03e-13 -0.443893 4e-09 rheumatoid arthritis 7_28135367 rs67250450 ENSG00000234336.6 JAZF1-AS1 -44955 3.03e-13 -0.443893 6e-06 rheumatoid arthritis 7_92607515 rs4272 ENSG00000157259.6 GATAD1 160062 9.37e-05 -0.117535 1e-08 rheumatoid arthritis 7_92607515 rs4272 ENSG00000157259.6 GATAD1 160062 9.37e-05 -0.117535 5e-07 rheumatoid arthritis 7_92607515 rs4272 ENSG00000157259.6 GATAD1 160062 9.37e-05 -0.117535 3e-07 rheumatoid arthritis 7_92607515 rs4272 ENSG00000157259.6 GATAD1 160062 9.37e-05 -0.117535 5e-09 rheumatoid arthritis 7_92609830 rs42034 ENSG00000105810.9 CDK6 -226764 3.13e-06 -0.218851 1e-08 rheumatoid arthritis 7_92617430 rs42041 ENSG00000105810.9 CDK6 -219164 5.44e-07 -0.233335 4e-06 rheumatoid arthritis 8_11502129 rs1600249 ENSG00000254527.1 ENPP7P12 -704260 5.36e-05 0.359892 5e-06 rheumatoid arthritis 9_120400388 rs12379034 ENSG00000136861.17 CDK5RAP2 -179782 1.88e-23 0.468377 1e-16 rheumatoid arthritis 9_120400388 rs12379034 ENSG00000136861.17 CDK5RAP2 -179782 1.88e-23 0.468377 1e-12 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000056558.10 TRAF1 -55330 6.34e-20 0.3628 5e-11 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000056558.10 TRAF1 -55330 6.34e-20 0.3628 3e-09 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000056558.10 TRAF1 -55330 6.34e-20 0.3628 4e-09 rheumatoid arthritis 9_120873843 rs10985070 ENSG00000056558.10 TRAF1 -55330 6.34e-20 0.3628 2e-08 rheumatoid arthritis 9_120889023 rs2072438 ENSG00000056558.10 TRAF1 -40150 1.27e-16 0.332494 3e-09 rheumatoid arthritis 9_120890620 rs881375 ENSG00000056558.10 TRAF1 -38553 1.25e-29 0.433186 4e-08 rheumatoid arthritis 9_120900340 rs10760126 ENSG00000056558.10 TRAF1 -28833 2.98e-17 0.339148 4e-12 rheumatoid arthritis 9_120905921 rs10435844 ENSG00000056558.10 TRAF1 -23252 6.2e-30 0.434042 1e-10 rheumatoid arthritis 9_120921291 rs2269060 ENSG00000056558.10 TRAF1 -7882 6e-19 0.348616 2e-08 rheumatoid arthritis 9_120921291 rs2269060 ENSG00000056558.10 TRAF1 -7882 6e-19 0.348616 4e-07 rheumatoid arthritis 9_120927961 rs3761847 ENSG00000056558.10 TRAF1 -1212 2.53e-19 0.350451 4e-14 rheumatoid arthritis 9_120927961 rs3761847 ENSG00000056558.10 TRAF1 -1212 2.53e-19 0.350451 2e-07 rheumatoid arthritis 9_120933004 rs10739580 ENSG00000056558.10 TRAF1 3831 4.48e-34 0.457202 2e-06 rheumatoid arthritis 9_120944104 rs2900180 ENSG00000056558.10 TRAF1 14931 4.79e-34 0.457832 6e-09 rheumatoid arthritis 9_136378050 rs3812565 ENSG00000165689.16 ENTR1 -32519 1.2e-09 -0.258708 2e-09 rheumatoid arthritis 9_136378050 rs3812565 ENSG00000148384.12 INPP5E -61773 1.48e-19 -0.447669 2e-09 rheumatoid arthritis 9_136378050 rs3812565 ENSG00000213221.4 DNLZ 14261 2.58e-10 -0.384168 2e-09 rheumatoid arthritis 9_136395373 rs4266763 ENSG00000148384.12 INPP5E -44450 1.01e-16 -0.409846 1e-13 rheumatoid arthritis 9_136395373 rs4266763 ENSG00000165689.16 ENTR1 -15196 1.3e-08 -0.239558 1e-13 rheumatoid arthritis 9_34710263 rs2812378 ENSG00000257198.6 FAM205BP -128323 4e-07 -0.14901 4e-11 rheumatoid arthritis 9_34710263 rs2812378 ENSG00000257198.6 FAM205BP -128323 4e-07 -0.14901 9e-09 rheumatoid arthritis 9_34710263 rs2812378 ENSG00000257198.6 FAM205BP -128323 4e-07 -0.14901 3e-08 rheumatoid arthritis 9_34710263 rs2812378 ENSG00000257198.6 FAM205BP -128323 4e-07 -0.14901 5e-11 rheumatoid arthritis 9_34710263 rs2812378 ENSG00000257198.6 FAM205BP -128323 4e-07 -0.14901 1e-09 rheumatoid arthritis 9_34710341 rs11574914 ENSG00000257198.6 FAM205BP -128245 1.32e-09 0.183574 2e-13 rheumatoid arthritis 9_34710341 rs11574914 ENSG00000257198.6 FAM205BP -128245 1.32e-09 0.183574 1e-14 rheumatoid arthritis 9_34710341 rs11574914 ENSG00000257198.6 FAM205BP -128245 1.32e-09 0.183574 3e-15 rheumatoid arthritis 9_34710341 rs11574914 ENSG00000257198.6 FAM205BP -128245 1.32e-09 0.183574 1e-13 rheumatoid arthritis 9_34710341 rs11574914 ENSG00000257198.6 FAM205BP -128245 1.32e-09 0.183574 2e-15 rheumatoid arthritis 9_34743684 rs951005 ENSG00000205108.5 FAM205A 14217 1.85e-15 -0.254602 4e-10 rheumatoid arthritis 9_4981602 rs10758669 ENSG00000235917.1 MTCO2P11 -116739 1.23e-06 -0.373289 6e-08 rheumatoid arthritis 9_4981602 rs10758669 ENSG00000224083.1 MTCO1P11 -115064 2.08e-05 -0.292762 6e-08 rheumatoid arthritis 9_4981602 rs10758669 ENSG00000236254.1 MTND4P14 -126335 5.55e-05 -0.314193 6e-08 rheumatoid arthritis 9_4981602 rs10758669 ENSG00000254017.1 IGHEP2 -131947 1.54e-07 -0.298158 6e-08 rheumatoid arthritis X_153982797 rs13397 ENSG00000177854.7 TMEM187 10470 3.92e-17 -0.285277 3e-12 rheumatoid arthritis X_153982797 rs13397 ENSG00000177854.7 TMEM187 10470 3.92e-17 -0.285277 1e-12 rheumatoid arthritis X_154018741 rs1059702 ENSG00000177854.7 TMEM187 46414 1.59e-16 0.282289 5e-10 rheumatoid arthritis X_154036016 rs5987194 ENSG00000177854.7 TMEM187 63689 1.49e-15 0.262799 3e-12 rheumatoid arthritis X_154036016 rs5987194 ENSG00000177854.7 TMEM187 63689 1.49e-15 0.262799 4e-22 rheumatoid arthritis X_154036016 rs5987194 ENSG00000177854.7 TMEM187 63689 1.49e-15 0.262799 5e-16