DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
rheumatoid arthritis	11_61138978	rs508970	ENSG00000110448.10	CD5	36583	1.36e-06	-0.638491	4e-06
rheumatoid arthritis	11_61138978	rs508970	ENSG00000110448.10	CD5	36583	1.36e-06	-0.638491	3e-06
rheumatoid arthritis	11_61142109	rs595158	ENSG00000110448.10	CD5	39714	1.01e-06	-0.625703	6e-06
rheumatoid arthritis	11_61142109	rs595158	ENSG00000110448.10	CD5	39714	1.01e-06	-0.625703	6e-06
rheumatoid arthritis	11_61142109	rs595158	ENSG00000110448.10	CD5	39714	1.01e-06	-0.625703	3e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	8.7e-17	1.00843	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	8.7e-17	1.00843	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	8.7e-17	1.00843	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	8.7e-17	1.00843	2e-08
rheumatoid arthritis	15_90350436	rs6496667	ENSG00000140575.12	IQGAP1	-37782	9.51e-09	0.467927	1e-06
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	2.23e-05	-0.58168	3e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	2.23e-05	-0.58168	5e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	2.23e-05	-0.58168	3e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	2.23e-05	-0.58168	2e-09
rheumatoid arthritis	22_21561877	rs5754100	ENSG00000161180.10	CCDC116	-70839	1.01e-08	-0.732167	9e-09
rheumatoid arthritis	22_21562072	rs5754104	ENSG00000161180.10	CCDC116	-70644	1.27e-08	-0.75081	1e-10
rheumatoid arthritis	22_21602364	rs2283790	ENSG00000161180.10	CCDC116	-30352	1.6e-08	-0.740622	2e-11
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.61e-06	-0.596665	2e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.61e-06	-0.596665	6e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.61e-06	-0.596665	2e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.61e-06	-0.596665	1e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	1.61e-06	-0.596665	4e-06
rheumatoid arthritis	22_21625000	rs4821124	ENSG00000161180.10	CCDC116	-7716	1.27e-08	-0.75081	2e-11
rheumatoid arthritis	22_21630805	rs5754467	ENSG00000161180.10	CCDC116	-1911	4.3e-07	-0.612168	1e-13
rheumatoid arthritis	4_25415622	rs3816587	ENSG00000053900.10	ANAPC4	38409	4.9e-06	-0.355241	9e-06
rheumatoid arthritis	4_971932	rs13101828	ENSG00000127415.12	IDUA	-15065	2.13e-07	0.400353	1e-08
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145217.13	SLC26A1	-21508	4.41e-09	-0.582662	1e-08
rheumatoid arthritis	5_150858959	rs147018773	ENSG00000197083.11	ZNF300P1	-87330	5.2e-16	1.37792	2e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204516.9	MICB	-109329	7.14e-07	0.798276	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204525.16	HLA-C	113447	2.12e-05	0.667689	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204536.13	CCHCR1	227314	2.05e-05	0.371812	9e-09
rheumatoid arthritis	6_32315077	rs6910071	ENSG00000237541.3	HLA-DQA2	-426265	9.05e-06	0.695234	1e-299
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000237541.3	HLA-DQA2	-333146	5.8e-12	0.988217	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000229391.7	HLA-DRB6	-151826	1.44e-09	0.771665	2e-124
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	4.37e-13	0.766361	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.71e-09	0.762138	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	4.37e-13	0.766361	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.71e-09	0.762138	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	4.37e-13	0.766361	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.71e-09	0.762138	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	4.37e-13	0.766361	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.71e-09	0.762138	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	4.37e-13	0.766361	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.71e-09	0.762138	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	4.37e-13	0.766361	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.71e-09	0.762138	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	4.37e-13	0.766361	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.71e-09	0.762138	1e-250
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000229391.7	HLA-DRB6	-83601	4.37e-13	0.766361	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000237541.3	HLA-DQA2	-264921	1.71e-09	0.762138	5e-58
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000229391.7	HLA-DRB6	-73863	1.32e-12	0.78293	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000237541.3	HLA-DQA2	-255183	1.02e-09	0.800319	6e-227
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000198502.5	HLA-DRB5	3080	2.32e-09	-0.677744	9e-52
rheumatoid arthritis	6_32606394	rs615672	ENSG00000198502.5	HLA-DRB5	76107	1.62e-05	-0.483233	8e-27
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	2.18e-17	1.12727	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	6.59e-06	0.582892	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	2.18e-17	1.12727	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	6.59e-06	0.582892	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	2.18e-17	1.12727	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	6.59e-06	0.582892	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	2.18e-17	1.12727	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	6.59e-06	0.582892	2e-08
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	1.83e-18	1.23997	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	9.68e-10	0.817797	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	1.83e-18	1.23997	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	9.68e-10	0.817797	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000237541.3	HLA-DQA2	-125762	1.83e-18	1.23997	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000229391.7	HLA-DRB6	55558	9.68e-10	0.817797	2e-10
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000198502.5	HLA-DRB5	85678	4.6e-12	-0.86032	5e-07
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000229391.7	HLA-DRB6	69223	9.68e-10	0.817797	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000237541.3	HLA-DQA2	-112097	1.83e-18	1.23997	3e-11
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000223534.1	HLA-DQB1-AS1	35719	2.23e-05	-0.360522	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	3.48e-06	0.597167	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000223534.1	HLA-DQB1-AS1	35719	2.23e-05	-0.360522	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	3.48e-06	0.597167	5e-75
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000223534.1	HLA-DQB1-AS1	35867	2.23e-05	-0.360522	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000237541.3	HLA-DQA2	-45120	3.48e-06	0.597167	4e-186
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000229391.7	HLA-DRB6	139308	5.14e-07	0.786115	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000237541.3	HLA-DQA2	-42012	1.1e-09	1.07065	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000237541.3	HLA-DQA2	-35545	1.1e-09	1.07065	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000229391.7	HLA-DRB6	145775	5.14e-07	0.786115	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000237541.3	HLA-DQA2	-33596	1.1e-09	1.07065	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000229391.7	HLA-DRB6	147724	5.14e-07	0.786115	2e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000229391.7	HLA-DRB6	147835	5.14e-07	0.786115	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000237541.3	HLA-DQA2	-33485	1.1e-09	1.07065	5e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000229391.7	HLA-DRB6	153684	5.14e-07	0.786115	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000237541.3	HLA-DQA2	-27636	1.1e-09	1.07065	2e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000237541.3	HLA-DQA2	-27589	1.1e-09	1.07065	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000229391.7	HLA-DRB6	153731	5.14e-07	0.786115	1e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000237541.3	HLA-DQA2	-27100	2.99e-09	1.04555	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000229391.7	HLA-DRB6	154220	4.62e-07	0.788019	2e-06
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	9.32e-10	-0.671224	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	9.32e-10	-0.671224	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	9.32e-10	-0.671224	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	9.32e-10	-0.671224	2e-08
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000226752.9	CUTALP	64195	1.3e-10	-0.699915	3e-09
rheumatoid arthritis	9_120890620	rs881375	ENSG00000226752.9	CUTALP	65792	1.87e-10	-0.768637	4e-08
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000226752.9	CUTALP	75512	5.14e-11	-0.712455	4e-12
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000226752.9	CUTALP	81093	1.87e-10	-0.768637	1e-10
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	3.22e-09	-0.648269	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	3.22e-09	-0.648269	4e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	6.96e-09	-0.630418	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	6.96e-09	-0.630418	4e-14
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000226752.9	CUTALP	108176	3.91e-11	-0.770751	2e-06
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000226752.9	CUTALP	119276	3.91e-11	-0.770751	6e-09
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	3.75e-07	-0.771424	1e-12
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	3.75e-07	-0.771424	3e-12
rheumatoid arthritis	X_154018741	rs1059702	ENSG00000177854.7	TMEM187	46414	5.62e-07	0.722898	5e-10
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	1.83e-05	0.593297	3e-12
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	1.83e-05	0.593297	5e-16
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	1.83e-05	0.593297	4e-22