DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	1.71e-08	-0.610993	5e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	2.09e-05	-0.48168	5e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	1.71e-08	-0.610993	1e-06
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	2.09e-05	-0.48168	1e-06
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	1.71e-08	-0.610993	2e-06
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	2.09e-05	-0.48168	2e-06
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000244682.7	FCGR2C	-146076	1.71e-08	-0.610993	1e-07
rheumatoid arthritis	1_161435263	rs72717009	ENSG00000225217.1	HSPA7	-171028	2.09e-05	-0.48168	1e-07
rheumatoid arthritis	1_161505960	rs10494360	ENSG00000225217.1	HSPA7	-100331	5.03e-07	-0.588381	3e-07
rheumatoid arthritis	1_161505960	rs10494360	ENSG00000244682.7	FCGR2C	-75379	1.24e-08	-0.644055	3e-07
rheumatoid arthritis	1_200905600	rs55838263	ENSG00000233217.2	MROH3P	-11860	3.1e-15	-0.638994	4e-15
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000215912.12	TTC34	-205023	1.02e-05	-0.215461	4e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000215912.12	TTC34	-205023	1.02e-05	-0.215461	7e-10
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000215912.12	TTC34	-205023	1.02e-05	-0.215461	7e-12
rheumatoid arthritis	1_2603539	rs6664969	ENSG00000215912.12	TTC34	-198178	2.24e-06	0.227893	1e-08
rheumatoid arthritis	1_2608357	rs4073285	ENSG00000215912.12	TTC34	-193360	4.4e-07	0.249068	2e-13
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	2e-06	0.230906	4e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	2e-06	0.230906	1e-07
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	2e-06	0.230906	2e-08
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000215912.12	TTC34	-179532	2e-06	0.230906	1e-06
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	9.91e-10	0.376693	2e-11
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	9.91e-10	0.376693	6e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	9.91e-10	0.376693	5e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	9.91e-10	0.376693	3e-12
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	9.91e-10	0.376693	6e-12
rheumatoid arthritis	10_31122426	rs1538981	ENSG00000272381.1	LINC02664	-65457	1.05e-05	-0.360838	4e-09
rheumatoid arthritis	10_31126177	rs793108	ENSG00000272381.1	LINC02664	-61706	1.14e-05	-0.351674	1e-09
rheumatoid arthritis	10_31126177	rs793108	ENSG00000272381.1	LINC02664	-61706	1.14e-05	-0.351674	6e-07
rheumatoid arthritis	10_31126177	rs793108	ENSG00000272381.1	LINC02664	-61706	1.14e-05	-0.351674	2e-07
rheumatoid arthritis	10_31126177	rs793108	ENSG00000272381.1	LINC02664	-61706	1.14e-05	-0.351674	8e-06
rheumatoid arthritis	11_609888	rs12421158	ENSG00000177042.14	TMEM80	-85645	3.01e-06	0.329854	4e-06
rheumatoid arthritis	11_61828092	rs968567	ENSG00000134824.13	FADS2	11836	4.71e-07	0.491318	2e-08
rheumatoid arthritis	11_61828092	rs968567	ENSG00000134824.13	FADS2	11836	4.71e-07	0.491318	7e-07
rheumatoid arthritis	11_633689	rs7929541	ENSG00000177042.14	TMEM80	-61844	2.39e-09	0.392073	2e-10
rheumatoid arthritis	11_64275525	rs660442	ENSG00000173457.10	PPP1R14B	28587	2.04e-06	-0.304576	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.94e-05	-0.215342	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	3.38e-38	0.999198	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.94e-05	-0.215342	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	3.38e-38	0.999198	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.94e-05	-0.215342	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	3.38e-38	0.999198	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.94e-05	-0.215342	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	3.38e-38	0.999198	2e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	2.2e-06	-0.277903	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	2.2e-06	-0.277903	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	2.2e-06	-0.277903	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	2.2e-06	-0.277903	1e-07
rheumatoid arthritis	13_39760715	rs9603612	ENSG00000133103.16	COG6	105088	1.26e-08	-0.333256	3e-13
rheumatoid arthritis	13_39776775	rs7993214	ENSG00000133103.16	COG6	121148	4e-08	0.322094	5e-06
rheumatoid arthritis	13_39781776	rs9532434	ENSG00000133103.16	COG6	126149	2.83e-07	0.304153	2e-19
rheumatoid arthritis	13_39793932	rs9603616	ENSG00000133103.16	COG6	138305	6.68e-09	-0.334554	2e-12
rheumatoid arthritis	13_39793932	rs9603616	ENSG00000133103.16	COG6	138305	6.68e-09	-0.334554	3e-11
rheumatoid arthritis	13_39793932	rs9603616	ENSG00000133103.16	COG6	138305	6.68e-09	-0.334554	2e-12
rheumatoid arthritis	13_39793932	rs9603616	ENSG00000133103.16	COG6	138305	6.68e-09	-0.334554	8e-11
rheumatoid arthritis	13_39797240	rs9603618	ENSG00000133103.16	COG6	141613	1.94e-07	-0.339481	5e-09
rheumatoid arthritis	15_90350436	rs6496667	ENSG00000140575.12	IQGAP1	-37782	2.63e-17	0.409584	1e-06
rheumatoid arthritis	15_90350436	rs6496667	ENSG00000196391.10	ZNF774	-1809	1.35e-05	0.253715	1e-06
rheumatoid arthritis	15_90483245	rs8040585	ENSG00000140575.12	IQGAP1	95027	4.33e-13	0.297742	2e-08
rheumatoid arthritis	17_39877024	rs1054609	ENSG00000167914.11	GSDMA	-76239	3.13e-08	0.50125	6e-07
rheumatoid arthritis	17_39884510	rs2872507	ENSG00000167914.11	GSDMA	-68753	3.13e-08	0.50125	9e-07
rheumatoid arthritis	17_39884510	rs2872507	ENSG00000167914.11	GSDMA	-68753	3.13e-08	0.50125	3e-09
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000167914.11	GSDMA	-65867	3.46e-08	0.513556	4e-07
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000167914.11	GSDMA	-65867	3.46e-08	0.513556	1e-10
rheumatoid arthritis	17_39887396	rs12936409	ENSG00000167914.11	GSDMA	-65867	3.46e-08	0.513556	7e-07
rheumatoid arthritis	17_39905943	rs2305480	ENSG00000167914.11	GSDMA	-47320	2.28e-08	0.519528	4e-09
rheumatoid arthritis	2_201196097	rs3731714	ENSG00000155749.12	FLACC1	-161301	3.64e-05	-0.369989	7e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	1.82e-09	-0.678365	3e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	1.82e-09	-0.678365	2e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	1.82e-09	-0.678365	3e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	1.82e-09	-0.678365	5e-07
rheumatoid arthritis	2_60841032	rs1432296	ENSG00000162927.13	PUS10	-177129	6.16e-06	0.42472	8e-10
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	1.31e-07	0.367715	1e-08
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	1.31e-07	0.367715	7e-12
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	1.31e-07	0.367715	8e-11
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	1.31e-07	0.367715	6e-12
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	1.31e-07	0.367715	8e-11
rheumatoid arthritis	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	1.31e-07	0.367715	2e-13
rheumatoid arthritis	22_21561877	rs5754100	ENSG00000161180.10	CCDC116	-70839	1.49e-09	-0.628863	9e-09
rheumatoid arthritis	22_21562072	rs5754104	ENSG00000161180.10	CCDC116	-70644	2.15e-09	-0.634973	1e-10
rheumatoid arthritis	22_21602364	rs2283790	ENSG00000161180.10	CCDC116	-30352	8.14e-09	-0.594998	2e-11
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	4.7e-08	-0.557552	4e-06
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	4.7e-08	-0.557552	2e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	4.7e-08	-0.557552	6e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	4.7e-08	-0.557552	1e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	4.7e-08	-0.557552	2e-07
rheumatoid arthritis	22_21625000	rs4821124	ENSG00000161180.10	CCDC116	-7716	3.35e-09	-0.612379	2e-11
rheumatoid arthritis	22_21630805	rs5754467	ENSG00000161180.10	CCDC116	-1911	2.27e-07	-0.527731	1e-13
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000164068.15	RNF123	-29476	1.11e-05	-0.207975	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000004534.14	RBM6	-279981	9.35e-06	0.247012	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000173531.15	MST1	-29472	0.00018883	0.214781	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000145020.15	AMT	237273	7.42e-07	0.185338	6e-06
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000004534.14	RBM6	-265143	9.64e-06	0.246095	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000145020.15	AMT	252111	1.44e-06	0.180345	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000164068.15	RNF123	-14638	9.6e-06	-0.208905	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000173531.15	MST1	-14634	0.000140673	0.218321	5e-07
rheumatoid arthritis	4_25415622	rs3816587	ENSG00000053900.10	ANAPC4	38409	3.09e-16	-0.455903	9e-06
rheumatoid arthritis	4_971932	rs13101828	ENSG00000127415.12	IDUA	-15065	8.61e-11	0.309976	1e-08
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145217.13	SLC26A1	-21508	3.87e-23	-0.721387	1e-08
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145214.13	DGKQ	-14963	5.6e-14	0.351009	1e-08
rheumatoid arthritis	5_103261019	rs26232	ENSG00000175749.11	EIF3KP1	228643	8.03e-09	0.606812	4e-08
rheumatoid arthritis	5_103261591	rs39984	ENSG00000175749.11	EIF3KP1	229215	8.03e-09	0.606812	3e-06
rheumatoid arthritis	5_103261591	rs39984	ENSG00000175749.11	EIF3KP1	229215	8.03e-09	0.606812	9e-08
rheumatoid arthritis	5_103268000	rs403214	ENSG00000175749.11	EIF3KP1	235624	9.7e-09	0.60843	4e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	7.51e-09	0.625173	1e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	7.51e-09	0.625173	9e-08
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	7.51e-09	0.625173	5e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	7.51e-09	0.625173	7e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	7.51e-09	0.625173	6e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	7.51e-09	0.625173	2e-11
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	7.51e-09	0.625173	1e-09
rheumatoid arthritis	5_10704685	rs2918392	ENSG00000112977.15	DAP	-56587	4.43e-06	-0.213042	5e-08
rheumatoid arthritis	5_150858959	rs147018773	ENSG00000197083.11	ZNF300P1	-87330	2.19e-16	1.07669	2e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204338.8	CYP21A1P	-620137	2.91e-05	-0.581813	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204536.13	CCHCR1	227314	7.06e-05	0.324563	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000244731.7	C4A	-596472	5.64e-06	-0.589901	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204516.9	MICB	-109329	2.05e-06	0.552768	9e-09
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204463.12	BAG6	2124	1.33e-06	0.305236	3e-10
rheumatoid arthritis	6_32251212	rs9296015	ENSG00000223534.1	HLA-DQB1-AS1	-409143	2.85e-05	-0.286307	2e-38
rheumatoid arthritis	6_32315077	rs6910071	ENSG00000237541.3	HLA-DQA2	-426265	1.11e-06	0.56019	1e-299
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000237541.3	HLA-DQA2	-333146	1.12e-14	0.782473	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000229391.7	HLA-DRB6	-151826	9.85e-10	0.539149	2e-124
rheumatoid arthritis	6_32446496	rs3129890	ENSG00000198502.5	HLA-DRB5	-83791	2.67e-06	-0.511583	1e-10
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000204516.9	MICB	952422	4.39e-05	0.390532	2e-09
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000198502.5	HLA-DRB5	-82984	1.4e-05	-0.53326	2e-09
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	6.92e-19	0.671066	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	7.12e-11	-0.374699	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.69e-12	0.657329	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.27e-07	-0.378513	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	6.92e-19	0.671066	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	7.12e-11	-0.374699	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.69e-12	0.657329	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.27e-07	-0.378513	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	6.92e-19	0.671066	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	7.12e-11	-0.374699	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.69e-12	0.657329	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.27e-07	-0.378513	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	6.92e-19	0.671066	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	7.12e-11	-0.374699	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.69e-12	0.657329	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.27e-07	-0.378513	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	6.92e-19	0.671066	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	7.12e-11	-0.374699	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.69e-12	0.657329	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.27e-07	-0.378513	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	6.92e-19	0.671066	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	7.12e-11	-0.374699	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.69e-12	0.657329	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.27e-07	-0.378513	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	6.92e-19	0.671066	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000223534.1	HLA-DQB1-AS1	-199360	7.12e-11	-0.374699	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	1.69e-12	0.657329	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000179344.16	HLA-DQB1	-207388	3.27e-07	-0.378513	1e-100
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000179344.16	HLA-DQB1	-191962	4.99e-07	-0.370775	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000237541.3	HLA-DQA2	-264921	2.73e-12	0.648053	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000223534.1	HLA-DQB1-AS1	-183934	3.91e-10	-0.359262	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000229391.7	HLA-DRB6	-83601	2.38e-18	0.658827	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000196126.11	HLA-DRB1	-113427	4.49e-05	-0.200713	5e-58
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000229391.7	HLA-DRB6	-73863	7.32e-16	0.662957	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000179344.16	HLA-DQB1	-182224	5.31e-06	-0.362816	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000223534.1	HLA-DQB1-AS1	-174196	4.68e-09	-0.363558	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000237541.3	HLA-DQA2	-255183	9.12e-11	0.651212	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000196126.11	HLA-DRB1	-103689	3.48e-05	-0.218455	6e-227
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000198502.5	HLA-DRB5	3080	3.1e-14	-0.644588	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000196301.3	HLA-DRB9	59867	4.43e-06	0.376314	9e-52
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000244731.7	C4A	551343	4.93e-05	-0.31528	9e-52
rheumatoid arthritis	6_32593593	rs35139284	ENSG00000223534.1	HLA-DQB1-AS1	-66762	1.33e-05	-0.258889	4e-287
rheumatoid arthritis	6_32593593	rs35139284	ENSG00000237541.3	HLA-DQA2	-147749	3.55e-05	0.403374	4e-287
rheumatoid arthritis	6_32606394	rs615672	ENSG00000198502.5	HLA-DRB5	76107	2.16e-08	-0.502059	8e-27
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.96e-22	0.938738	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	2.03e-06	0.426648	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.96e-22	0.938738	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	2.03e-06	0.426648	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.96e-22	0.938738	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	2.03e-06	0.426648	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.96e-22	0.938738	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	2.03e-06	0.426648	1e-300
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	3.36e-24	1.0912	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	8.48e-12	0.668959	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	3.36e-24	1.0912	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	8.48e-12	0.668959	5e-21
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000229391.7	HLA-DRB6	55558	8.48e-12	0.668959	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000237541.3	HLA-DQA2	-125762	3.36e-24	1.0912	2e-10
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000198502.5	HLA-DRB5	85678	4.27e-17	-0.767153	5e-07
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000229391.7	HLA-DRB6	69223	8.48e-12	0.668959	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000237541.3	HLA-DQA2	-112097	3.36e-24	1.0912	3e-11
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	2.65e-06	0.423154	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000179344.16	HLA-DQB1	27691	5.27e-05	-0.282739	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000223534.1	HLA-DQB1-AS1	35719	1.11e-05	-0.242891	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	2.65e-06	0.423154	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000179344.16	HLA-DQB1	27691	5.27e-05	-0.282739	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000223534.1	HLA-DQB1-AS1	35719	1.11e-05	-0.242891	1e-09
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000237541.3	HLA-DQA2	-45120	2.65e-06	0.423154	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000223534.1	HLA-DQB1-AS1	35867	1.11e-05	-0.242891	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000179344.16	HLA-DQB1	27839	5.27e-05	-0.282739	4e-186
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000237541.3	HLA-DQA2	-42012	1e-14	1.06927	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000229391.7	HLA-DRB6	139308	4.25e-10	0.749871	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000229391.7	HLA-DRB6	145775	4.25e-10	0.749871	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000237541.3	HLA-DQA2	-35545	1e-14	1.06927	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000229391.7	HLA-DRB6	147724	4.25e-10	0.749871	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000237541.3	HLA-DQA2	-33596	1e-14	1.06927	2e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000229391.7	HLA-DRB6	147835	4.25e-10	0.749871	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000237541.3	HLA-DQA2	-33485	1e-14	1.06927	5e-06
rheumatoid arthritis	6_32713151	rs7765379	ENSG00000237541.3	HLA-DQA2	-28191	6.96e-06	0.683372	5e-23
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000237541.3	HLA-DQA2	-27636	1e-14	1.06927	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000229391.7	HLA-DRB6	153684	4.25e-10	0.749871	2e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000237541.3	HLA-DQA2	-27589	1e-14	1.06927	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000229391.7	HLA-DRB6	153731	4.25e-10	0.749871	1e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000229391.7	HLA-DRB6	154220	4.25e-10	0.749871	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000237541.3	HLA-DQA2	-27100	1e-14	1.06927	2e-06
rheumatoid arthritis	7_128936032	rs3757387	ENSG00000128604.19	IRF5	-1580	1.32e-05	0.138957	2e-19
rheumatoid arthritis	7_128936032	rs3757387	ENSG00000128604.19	IRF5	-1580	1.32e-05	0.138957	5e-09
rheumatoid arthritis	7_128939988	rs3778753	ENSG00000128604.19	IRF5	2376	8.58e-06	0.141676	3e-14
rheumatoid arthritis	7_128939988	rs3778753	ENSG00000128604.19	IRF5	2376	8.58e-06	0.141676	4e-12
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	1.61e-05	0.138233	7e-10
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	1.61e-05	0.138233	3e-07
rheumatoid arthritis	7_128940626	rs3807306	ENSG00000128604.19	IRF5	3014	1.61e-05	0.138233	5e-10
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	4.04e-12	-0.52801	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	4.04e-12	-0.52801	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	4.04e-12	-0.52801	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	4.04e-12	-0.52801	5e-11
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000056558.10	TRAF1	-40150	6.25e-06	-0.21599	3e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000226752.9	CUTALP	64195	1.29e-12	-0.544204	3e-09
rheumatoid arthritis	9_120890620	rs881375	ENSG00000056558.10	TRAF1	-38553	3.1e-05	-0.205882	4e-08
rheumatoid arthritis	9_120890620	rs881375	ENSG00000226752.9	CUTALP	65792	2.35e-14	-0.595814	4e-08
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000056558.10	TRAF1	-28833	6.68e-06	-0.21783	4e-12
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000226752.9	CUTALP	75512	1.4e-13	-0.570362	4e-12
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000226752.9	CUTALP	81093	2.35e-14	-0.595814	1e-10
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000056558.10	TRAF1	-23252	3.1e-05	-0.205882	1e-10
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	3.42e-12	-0.515905	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	3.42e-12	-0.515905	4e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	5.93e-13	-0.525659	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	5.93e-13	-0.525659	4e-14
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000226752.9	CUTALP	108176	2.82e-15	-0.604405	2e-06
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000226752.9	CUTALP	119276	2.82e-15	-0.604405	6e-09
rheumatoid arthritis	9_4981602	rs10758669	ENSG00000254017.1	IGHEP2	-131947	9.07e-06	-0.372553	6e-08
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	2.99e-11	-0.402094	3e-12
rheumatoid arthritis	X_153982797	rs13397	ENSG00000198753.11	PLXNB3	218601	3.14e-10	0.367626	3e-12
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	2.99e-11	-0.402094	1e-12
rheumatoid arthritis	X_153982797	rs13397	ENSG00000198753.11	PLXNB3	218601	3.14e-10	0.367626	1e-12
rheumatoid arthritis	X_154018741	rs1059702	ENSG00000177854.7	TMEM187	46414	4.02e-11	0.40599	5e-10
rheumatoid arthritis	X_154018741	rs1059702	ENSG00000198753.11	PLXNB3	254545	2.58e-10	-0.374947	5e-10
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000198753.11	PLXNB3	271820	6.29e-08	-0.306748	3e-12
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	1.16e-10	0.374242	3e-12
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000198753.11	PLXNB3	271820	6.29e-08	-0.306748	4e-22
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	1.16e-10	0.374242	4e-22
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000198753.11	PLXNB3	271820	6.29e-08	-0.306748	5e-16
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	1.16e-10	0.374242	5e-16