DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
rheumatoid arthritis	1_17328912	rs1748041	ENSG00000159339.13	PADI4	20717	1.32e-06	0.56503	2e-09
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.87e-18	0.863279	6e-19
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.87e-18	0.863279	4e-26
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.87e-18	0.863279	9e-13
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.87e-18	0.863279	5e-21
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.87e-18	0.863279	6e-09
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.87e-18	0.863279	8e-13
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.87e-18	0.863279	1e-18
rheumatoid arthritis	1_17346235	rs2301888	ENSG00000159339.13	PADI4	38040	9.87e-18	0.863279	6e-09
rheumatoid arthritis	1_17347613	rs2240339	ENSG00000159339.13	PADI4	39418	5.8e-17	0.847867	3e-10
rheumatoid arthritis	1_17347613	rs2240339	ENSG00000159339.13	PADI4	39418	5.8e-17	0.847867	1e-10
rheumatoid arthritis	1_17347907	rs2240336	ENSG00000159339.13	PADI4	39712	1.52e-13	0.73515	4e-08
rheumatoid arthritis	1_17347907	rs2240336	ENSG00000159339.13	PADI4	39712	1.52e-13	0.73515	6e-09
rheumatoid arthritis	1_17348042	rs2240335	ENSG00000159339.13	PADI4	39847	4.18e-17	0.852069	2e-08
rheumatoid arthritis	1_17348042	rs2240335	ENSG00000159339.13	PADI4	39847	4.18e-17	0.852069	2e-08
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	3.12e-08	0.363857	2e-11
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	3.12e-08	0.363857	6e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	3.12e-08	0.363857	3e-12
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	3.12e-08	0.363857	5e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	3.12e-08	0.363857	6e-12
rheumatoid arthritis	11_609888	rs12421158	ENSG00000177042.14	TMEM80	-85645	3.33e-06	0.456092	4e-06
rheumatoid arthritis	11_61822009	rs28456	ENSG00000149485.18	FADS1	-7309	1.56e-05	-0.23159	4e-06
rheumatoid arthritis	11_61828092	rs968567	ENSG00000149485.18	FADS1	-1226	3.45e-05	-0.284738	2e-08
rheumatoid arthritis	11_61828092	rs968567	ENSG00000149485.18	FADS1	-1226	3.45e-05	-0.284738	7e-07
rheumatoid arthritis	11_633689	rs7929541	ENSG00000177042.14	TMEM80	-61844	9.06e-13	0.622524	2e-10
rheumatoid arthritis	12_48021974	rs4760609	ENSG00000177981.10	ASB8	-159239	5.91e-06	0.369406	3e-12
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	7.15e-21	0.878603	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.39e-05	-0.244315	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	7.15e-21	0.878603	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.39e-05	-0.244315	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	7.15e-21	0.878603	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.39e-05	-0.244315	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	7.15e-21	0.878603	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.39e-05	-0.244315	1e-10
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	9.07e-11	-0.48881	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	9.07e-11	-0.48881	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	9.07e-11	-0.48881	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	9.07e-11	-0.48881	9e-08
rheumatoid arthritis	14_104919812	rs2841269	ENSG00000140104.13	CLBA1	-65963	1.66e-07	0.34567	2e-16
rheumatoid arthritis	14_104924668	rs2841277	ENSG00000140104.13	CLBA1	-61107	1.03e-08	0.377285	2e-14
rheumatoid arthritis	15_90350436	rs6496667	ENSG00000140575.12	IQGAP1	-37782	3.62e-09	0.403738	1e-06
rheumatoid arthritis	15_90483245	rs8040585	ENSG00000140575.12	IQGAP1	95027	1.21e-10	0.348241	2e-08
rheumatoid arthritis	19_10359299	rs12720356	ENSG00000220201.7	ZGLP1	49419	3.71e-05	-0.26	4e-09
rheumatoid arthritis	2_100056230	rs10209110	ENSG00000144218.18	AFF3	-86509	7.35e-11	0.289787	7e-08
rheumatoid arthritis	2_100056230	rs10209110	ENSG00000144218.18	AFF3	-86509	7.35e-11	0.289787	1e-08
rheumatoid arthritis	2_100142823	rs11123810	ENSG00000144218.18	AFF3	84	3.39e-07	0.250017	7e-12
rheumatoid arthritis	2_100143710	rs11123811	ENSG00000144218.18	AFF3	971	7.93e-09	0.265206	9e-16
rheumatoid arthritis	2_100143710	rs11123811	ENSG00000144218.18	AFF3	971	7.93e-09	0.265206	2e-18
rheumatoid arthritis	2_100147542	rs13415465	ENSG00000144218.18	AFF3	4803	3.39e-07	0.250017	7e-11
rheumatoid arthritis	2_100190052	rs6712515	ENSG00000144218.18	AFF3	47313	2.5e-08	0.249918	2e-11
rheumatoid arthritis	2_100190052	rs6712515	ENSG00000144218.18	AFF3	47313	2.5e-08	0.249918	3e-11
rheumatoid arthritis	2_100190478	rs11676922	ENSG00000144218.18	AFF3	47739	2.5e-08	0.249918	2e-08
rheumatoid arthritis	2_100190478	rs11676922	ENSG00000144218.18	AFF3	47739	2.5e-08	0.249918	1e-14
rheumatoid arthritis	2_100208905	rs9653442	ENSG00000144218.18	AFF3	66166	9.96e-09	0.251907	2e-18
rheumatoid arthritis	2_100208905	rs9653442	ENSG00000144218.18	AFF3	66166	9.96e-09	0.251907	2e-15
rheumatoid arthritis	2_100208905	rs9653442	ENSG00000144218.18	AFF3	66166	9.96e-09	0.251907	1e-14
rheumatoid arthritis	2_100208905	rs9653442	ENSG00000144218.18	AFF3	66166	9.96e-09	0.251907	4e-12
rheumatoid arthritis	2_100219272	rs10865035	ENSG00000144218.18	AFF3	76533	1.97e-08	0.252376	2e-06
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	3.44e-06	-0.694559	3e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	3.44e-06	-0.694559	2e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	3.44e-06	-0.694559	3e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	3.44e-06	-0.694559	5e-07
rheumatoid arthritis	20_46105671	rs6032662	ENSG00000101017.13	CD40	-12601	8.22e-06	0.310938	1e-09
rheumatoid arthritis	20_46118343	rs1883832	ENSG00000101017.13	CD40	71	4.7e-06	0.31943	9e-15
rheumatoid arthritis	20_46118343	rs1883832	ENSG00000101017.13	CD40	71	4.7e-06	0.31943	2e-13
rheumatoid arthritis	20_46118343	rs1883832	ENSG00000101017.13	CD40	71	4.7e-06	0.31943	1e-16
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	7.19e-06	0.313033	8e-09
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	7.19e-06	0.313033	2e-07
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	7.19e-06	0.313033	3e-09
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000101017.13	CD40	1036	7.19e-06	0.313033	9e-11
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	1.12e-05	0.294735	4e-14
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	1.12e-05	0.294735	3e-14
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	1.12e-05	0.294735	1e-16
rheumatoid arthritis	20_46120612	rs4239702	ENSG00000101017.13	CD40	2340	1.12e-05	0.294735	4e-18
rheumatoid arthritis	22_21561877	rs5754100	ENSG00000161180.10	CCDC116	-70839	2.52e-06	-0.564527	9e-09
rheumatoid arthritis	22_21562072	rs5754104	ENSG00000161180.10	CCDC116	-70644	2.2e-06	-0.581315	1e-10
rheumatoid arthritis	22_21602364	rs2283790	ENSG00000161180.10	CCDC116	-30352	1.4e-06	-0.562885	2e-11
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	8.06e-06	-0.561221	4e-06
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	8.06e-06	-0.561221	1e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	8.06e-06	-0.561221	2e-07
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	8.06e-06	-0.561221	2e-09
rheumatoid arthritis	22_21624807	rs11089637	ENSG00000161180.10	CCDC116	-7909	8.06e-06	-0.561221	6e-07
rheumatoid arthritis	22_21625000	rs4821124	ENSG00000161180.10	CCDC116	-7716	2.52e-06	-0.564527	2e-11
rheumatoid arthritis	22_21630805	rs5754467	ENSG00000161180.10	CCDC116	-1911	2.95e-07	-0.610141	1e-13
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000164068.15	RNF123	-29476	0.000165938	-0.128244	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000233276.3	GPX1	301426	0.000156113	-0.232361	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000173531.15	MST1	-29472	0.000133312	0.267811	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000004534.14	RBM6	-279981	5.96e-05	0.283677	6e-06
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000004534.14	RBM6	-265143	3.99e-05	0.287943	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000233276.3	GPX1	316264	5.74e-05	-0.244664	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000164068.15	RNF123	-14638	0.000130959	-0.129257	5e-07
rheumatoid arthritis	4_25415622	rs3816587	ENSG00000053900.10	ANAPC4	38409	3.99e-09	-0.397861	9e-06
rheumatoid arthritis	5_10704685	rs2918392	ENSG00000112977.15	DAP	-56587	1.81e-05	0.207542	5e-08
rheumatoid arthritis	5_150858959	rs147018773	ENSG00000197083.11	ZNF300P1	-87330	2.77e-17	1.22481	2e-09
rheumatoid arthritis	5_56144903	rs71624119	ENSG00000134352.19	IL6ST	149910	1.07e-05	-0.187841	3e-18
rheumatoid arthritis	5_56144903	rs71624119	ENSG00000134352.19	IL6ST	149910	1.07e-05	-0.187841	1e-19
rheumatoid arthritis	5_56144903	rs71624119	ENSG00000134352.19	IL6ST	149910	1.07e-05	-0.187841	3e-13
rheumatoid arthritis	5_56144903	rs71624119	ENSG00000134352.19	IL6ST	149910	1.07e-05	-0.187841	6e-20
rheumatoid arthritis	5_56144903	rs71624119	ENSG00000134352.19	IL6ST	149910	1.07e-05	-0.187841	5e-12
rheumatoid arthritis	5_56144903	rs71624119	ENSG00000134352.19	IL6ST	149910	1.07e-05	-0.187841	1e-11
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204338.8	CYP21A1P	-620137	3.64e-05	-0.728934	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204525.16	HLA-C	113447	1.81e-05	0.57095	9e-09
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204463.12	BAG6	2124	1.87e-10	0.616618	3e-10
rheumatoid arthritis	6_32315077	rs6910071	ENSG00000237541.3	HLA-DQA2	-426265	3.18e-05	0.609314	1e-299
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000237541.3	HLA-DQA2	-333146	5.19e-09	0.744845	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000229391.7	HLA-DRB6	-151826	2.71e-06	0.508491	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000196126.11	HLA-DRB1	-181652	5.88e-07	-0.439401	2e-124
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000244731.7	C4A	465279	8.07e-06	-0.455657	2e-09
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	3.16e-08	-0.397348	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	9.18e-07	0.527169	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.37e-16	0.676502	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	3.16e-08	-0.397348	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	9.18e-07	0.527169	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.37e-16	0.676502	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	3.16e-08	-0.397348	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	9.18e-07	0.527169	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.37e-16	0.676502	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	3.16e-08	-0.397348	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	9.18e-07	0.527169	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.37e-16	0.676502	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	3.16e-08	-0.397348	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	9.18e-07	0.527169	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.37e-16	0.676502	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	3.16e-08	-0.397348	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	9.18e-07	0.527169	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.37e-16	0.676502	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	3.16e-08	-0.397348	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	9.18e-07	0.527169	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.37e-16	0.676502	4e-134
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000196126.11	HLA-DRB1	-113427	3.16e-08	-0.397348	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000229391.7	HLA-DRB6	-83601	1.37e-16	0.676502	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000237541.3	HLA-DQA2	-264921	9.18e-07	0.527169	5e-58
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000229391.7	HLA-DRB6	-73863	5.45e-13	0.635867	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000196126.11	HLA-DRB1	-103689	1e-06	-0.371824	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000237541.3	HLA-DQA2	-255183	1.22e-05	0.49557	6e-227
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000198502.5	HLA-DRB5	3080	1.77e-10	-0.623343	9e-52
rheumatoid arthritis	6_32606394	rs615672	ENSG00000232629.8	HLA-DQB2	-157140	2.5e-05	0.557934	8e-27
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	9.56e-08	-0.454507	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	9.66e-15	0.916311	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	1.71e-05	0.457641	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	9.56e-08	-0.454507	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	9.66e-15	0.916311	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	1.71e-05	0.457641	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	9.56e-08	-0.454507	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	9.66e-15	0.916311	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	1.71e-05	0.457641	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000196126.11	HLA-DRB1	19755	9.56e-08	-0.454507	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	9.66e-15	0.916311	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	1.71e-05	0.457641	2e-08
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	1.54e-08	0.641845	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	8.2e-14	0.975229	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000196126.11	HLA-DRB1	25025	5.29e-11	-0.594925	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	1.54e-08	0.641845	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	8.2e-14	0.975229	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000196126.11	HLA-DRB1	25025	5.29e-11	-0.594925	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000196126.11	HLA-DRB1	25732	5.29e-11	-0.594925	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000229391.7	HLA-DRB6	55558	1.54e-08	0.641845	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000237541.3	HLA-DQA2	-125762	8.2e-14	0.975229	2e-10
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000198502.5	HLA-DRB5	85678	8.61e-12	-0.71944	5e-07
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000229391.7	HLA-DRB6	69223	3.22e-08	0.617682	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000196126.11	HLA-DRB1	39397	2.53e-10	-0.56629	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000237541.3	HLA-DQA2	-112097	1.08e-13	0.953732	3e-11
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	2.04e-06	0.562235	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000232629.8	HLA-DQB2	-67460	6.14e-08	0.667485	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	2.04e-06	0.562235	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000232629.8	HLA-DQB2	-67460	6.14e-08	0.667485	5e-75
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000232629.8	HLA-DQB2	-67312	6.14e-08	0.667485	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000237541.3	HLA-DQA2	-45120	2.04e-06	0.562235	4e-186
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000229391.7	HLA-DRB6	139308	4.42e-05	0.611035	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000237541.3	HLA-DQA2	-42012	2.52e-08	0.976303	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000237541.3	HLA-DQA2	-35545	2.52e-08	0.976303	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000229391.7	HLA-DRB6	145775	4.42e-05	0.611035	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000237541.3	HLA-DQA2	-33596	2.52e-08	0.976303	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000229391.7	HLA-DRB6	147724	4.42e-05	0.611035	2e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000229391.7	HLA-DRB6	147835	4.42e-05	0.611035	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000237541.3	HLA-DQA2	-33485	2.52e-08	0.976303	5e-06
rheumatoid arthritis	6_32713151	rs7765379	ENSG00000232629.8	HLA-DQB2	-50383	1.39e-06	0.913929	5e-23
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000229391.7	HLA-DRB6	153684	4.42e-05	0.611035	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000237541.3	HLA-DQA2	-27636	2.52e-08	0.976303	2e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000229391.7	HLA-DRB6	153731	4.42e-05	0.611035	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000237541.3	HLA-DQA2	-27589	2.52e-08	0.976303	1e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000229391.7	HLA-DRB6	154220	4.42e-05	0.611035	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000237541.3	HLA-DQA2	-27100	2.52e-08	0.976303	2e-06
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	1.24e-06	-0.376691	2e-06
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	1.24e-06	-0.376691	6e-06
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	1.24e-06	-0.376691	4e-09
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	1.24e-06	-0.376691	3e-09
rheumatoid arthritis	7_74123572	rs193107685	ENSG00000165171.10	METTL27	281037	1.04e-05	1.56722	3e-09
rheumatoid arthritis	7_74123572	rs193107685	ENSG00000233369.7	GTF2IP4	968634	2.1e-06	-1.55844	3e-09
rheumatoid arthritis	8_11480861	rs2618444	ENSG00000227888.4	FAM66A	-881158	1.64e-05	0.578074	7e-12
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	1.64e-05	0.578074	2e-07
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	1.64e-05	0.578074	3e-13
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	1.64e-05	0.578074	2e-06
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	1.64e-05	0.578074	4e-13
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	1.64e-05	0.578074	2e-07
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	1.64e-05	0.578074	8e-08
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	1.64e-05	0.578074	5e-22
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000227888.4	FAM66A	-875555	1.64e-05	0.578074	9e-12
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000227888.4	FAM66A	-875555	1.64e-05	0.578074	6e-09
rheumatoid arthritis	8_11491452	rs9693589	ENSG00000227888.4	FAM66A	-870567	1.64e-05	0.578074	2e-18
rheumatoid arthritis	8_11502129	rs1600249	ENSG00000254507.2	DEFB131E	-501953	2.35e-06	0.589214	5e-06
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	1.47e-09	-0.671639	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	1.47e-09	-0.671639	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	1.47e-09	-0.671639	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	1.47e-09	-0.671639	3e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000226752.9	CUTALP	64195	3.23e-10	-0.700605	3e-09
rheumatoid arthritis	9_120890620	rs881375	ENSG00000226752.9	CUTALP	65792	1.54e-09	-0.698421	4e-08
rheumatoid arthritis	9_120890620	rs881375	ENSG00000056558.10	TRAF1	-38553	1.6e-07	0.272772	4e-08
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000226752.9	CUTALP	75512	1.62e-10	-0.706769	4e-12
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000056558.10	TRAF1	-23252	2.39e-07	0.267876	1e-10
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000226752.9	CUTALP	81093	7.66e-10	-0.705825	1e-10
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	4.29e-09	-0.630259	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	4.29e-09	-0.630259	4e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	1.41e-09	-0.646006	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	1.41e-09	-0.646006	4e-14
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000226752.9	CUTALP	108176	1.26e-09	-0.699009	2e-06
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000056558.10	TRAF1	3831	2.75e-07	0.267042	2e-06
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000056558.10	TRAF1	14931	2.75e-07	0.267042	6e-09
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000226752.9	CUTALP	119276	1.26e-09	-0.699009	6e-09
rheumatoid arthritis	9_136378050	rs3812565	ENSG00000148384.12	INPP5E	-61773	7.71e-07	-0.260787	2e-09
rheumatoid arthritis	9_136378050	rs3812565	ENSG00000160360.12	GPSM1	50574	9.2e-06	-0.21584	2e-09
rheumatoid arthritis	9_136395373	rs4266763	ENSG00000160360.12	GPSM1	67897	7.42e-06	-0.220713	1e-13
rheumatoid arthritis	9_136395373	rs4266763	ENSG00000148384.12	INPP5E	-44450	4.56e-07	-0.269045	1e-13
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	7.67e-06	-0.379731	1e-12
rheumatoid arthritis	X_153982797	rs13397	ENSG00000177854.7	TMEM187	10470	7.67e-06	-0.379731	3e-12
rheumatoid arthritis	X_154018741	rs1059702	ENSG00000177854.7	TMEM187	46414	7.67e-06	0.379731	5e-10
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	7.99e-06	0.378404	3e-12
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	7.99e-06	0.378404	4e-22
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000177854.7	TMEM187	63689	7.99e-06	0.378404	5e-16