DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
rheumatoid arthritis	1_2552522	rs2258734	ENSG00000142606.15	MMEL1	-80468	2.92e-09	-0.409204	6e-14
rheumatoid arthritis	1_2552522	rs2258734	ENSG00000157873.17	TNFRSF14	-4175	2.36e-05	0.159312	6e-14
rheumatoid arthritis	1_2569783	rs10797431	ENSG00000157870.14	PRXL2B	-16708	1.59e-05	-0.25621	1e-08
rheumatoid arthritis	1_2569783	rs10797431	ENSG00000142606.15	MMEL1	-63207	5.55e-11	-0.435535	1e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000157873.17	TNFRSF14	39997	7.47e-06	-0.16874	4e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000142606.15	MMEL1	-36296	7.09e-10	0.424429	4e-08
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000157873.17	TNFRSF14	39997	7.47e-06	-0.16874	7e-10
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000142606.15	MMEL1	-36296	7.09e-10	0.424429	7e-10
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000157873.17	TNFRSF14	39997	7.47e-06	-0.16874	7e-12
rheumatoid arthritis	1_2596694	rs2843401	ENSG00000142606.15	MMEL1	-36296	7.09e-10	0.424429	7e-12
rheumatoid arthritis	1_2603539	rs6664969	ENSG00000142606.15	MMEL1	-29451	1.8e-09	-0.416596	1e-08
rheumatoid arthritis	1_2603539	rs6664969	ENSG00000157873.17	TNFRSF14	46842	1.52e-05	0.163771	1e-08
rheumatoid arthritis	1_2608357	rs4073285	ENSG00000157873.17	TNFRSF14	51660	3.22e-05	0.155313	2e-13
rheumatoid arthritis	1_2608357	rs4073285	ENSG00000142606.15	MMEL1	-24633	6.27e-10	-0.420261	2e-13
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157873.17	TNFRSF14	65488	1.36e-05	0.163531	1e-07
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	3.02e-10	-0.430871	1e-07
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157873.17	TNFRSF14	65488	1.36e-05	0.163531	4e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	3.02e-10	-0.430871	4e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157873.17	TNFRSF14	65488	1.36e-05	0.163531	2e-08
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	3.02e-10	-0.430871	2e-08
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000157873.17	TNFRSF14	65488	1.36e-05	0.163531	1e-06
rheumatoid arthritis	1_2622185	rs3890745	ENSG00000142606.15	MMEL1	-10805	3.02e-10	-0.430871	1e-06
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	7.83e-09	0.277579	3e-12
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	7.83e-09	0.277579	2e-11
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	7.83e-09	0.277579	6e-09
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	7.83e-09	0.277579	6e-12
rheumatoid arthritis	1_37812907	rs28411352	ENSG00000204084.12	INPP5B	-134150	7.83e-09	0.277579	5e-09
rheumatoid arthritis	11_609888	rs12421158	ENSG00000177042.14	TMEM80	-85645	1.82e-06	0.431503	4e-06
rheumatoid arthritis	11_61822009	rs28456	ENSG00000149485.18	FADS1	-7309	5.44e-06	-0.243191	4e-06
rheumatoid arthritis	11_633689	rs7929541	ENSG00000177042.14	TMEM80	-61844	2.48e-14	0.643363	2e-10
rheumatoid arthritis	11_633689	rs7929541	ENSG00000254815.5	LMNTD2-AS1	76048	1.9e-07	0.316701	2e-10
rheumatoid arthritis	11_64275525	rs660442	ENSG00000168071.21	CCDC88B	-64698	7.4e-06	-0.258012	1e-09
rheumatoid arthritis	12_48021974	rs4760609	ENSG00000177981.10	ASB8	-159239	5.36e-09	0.343916	3e-12
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	6.84e-45	0.945059	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.04e-10	-0.285941	1e-09
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	6.84e-45	0.945059	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.04e-10	-0.285941	1e-10
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	6.84e-45	0.945059	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.04e-10	-0.285941	9e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000197728.9	RPS26	-40683	6.84e-45	0.945059	2e-08
rheumatoid arthritis	12_56001170	rs773125	ENSG00000139531.12	SUOX	3990	3.04e-10	-0.285941	2e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	7.24e-07	0.278128	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	2.03e-15	-0.542978	7e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	7.24e-07	0.278128	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	2.03e-15	-0.542978	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	7.24e-07	0.278128	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	2.03e-15	-0.542978	1e-07
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123297.17	TSFM	-68320	7.24e-07	0.278128	9e-08
rheumatoid arthritis	12_57714269	rs1633360	ENSG00000123427.16	EEF1AKMT3	-57337	2.03e-15	-0.542978	9e-08
rheumatoid arthritis	13_39760715	rs9603612	ENSG00000133103.16	COG6	105088	4.18e-05	-0.232923	3e-13
rheumatoid arthritis	14_104919812	rs2841269	ENSG00000140104.13	CLBA1	-65963	5.72e-06	0.232218	2e-16
rheumatoid arthritis	14_104924668	rs2841277	ENSG00000140104.13	CLBA1	-61107	9.44e-07	0.247291	2e-14
rheumatoid arthritis	15_90350436	rs6496667	ENSG00000140575.12	IQGAP1	-37782	4.73e-16	0.418372	1e-06
rheumatoid arthritis	15_90483245	rs8040585	ENSG00000140575.12	IQGAP1	95027	4.88e-14	0.315961	2e-08
rheumatoid arthritis	16_11745470	rs4780401	ENSG00000184602.5	SNN	77056	1.77e-05	0.210424	4e-08
rheumatoid arthritis	16_11745470	rs4780401	ENSG00000184602.5	SNN	77056	1.77e-05	0.210424	6e-07
rheumatoid arthritis	16_11745470	rs4780401	ENSG00000184602.5	SNN	77056	1.77e-05	0.210424	9e-09
rheumatoid arthritis	16_11745470	rs4780401	ENSG00000184602.5	SNN	77056	1.77e-05	0.210424	5e-07
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000196118.11	CFAP119	-147415	1.31e-06	-0.30483	3e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000178226.10	PRSS36	-534799	7.3e-06	0.339811	3e-08
rheumatoid arthritis	16_30615295	rs12918327	ENSG00000103549.21	RNF40	-147823	0.000110884	0.211785	3e-08
rheumatoid arthritis	2_201196097	rs3731714	ENSG00000240344.8	PPIL3	306794	7.05e-07	0.514511	7e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	9.58e-07	-0.632909	3e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	9.58e-07	-0.632909	5e-07
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	9.58e-07	-0.632909	3e-09
rheumatoid arthritis	2_201289674	rs6715284	ENSG00000240344.8	PPIL3	400371	9.58e-07	-0.632909	2e-09
rheumatoid arthritis	20_46105671	rs6032662	ENSG00000124140.13	SLC12A5	82828	2.19e-05	-0.108899	1e-09
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000124140.13	SLC12A5	96465	3.48e-05	-0.106746	8e-09
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000124140.13	SLC12A5	96465	3.48e-05	-0.106746	2e-07
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000124140.13	SLC12A5	96465	3.48e-05	-0.106746	9e-11
rheumatoid arthritis	20_46119308	rs4810485	ENSG00000124140.13	SLC12A5	96465	3.48e-05	-0.106746	3e-09
rheumatoid arthritis	22_30174033	rs1003342	ENSG00000227117.6	HORMAD2-AS1	93860	2.31e-05	-0.294934	6e-10
rheumatoid arthritis	22_30285268	rs1043099	ENSG00000214491.8	SEC14L6	-261414	3.47e-05	0.310289	7e-09
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000233276.3	GPX1	301426	2.08e-05	-0.173308	6e-06
rheumatoid arthritis	3_49660026	rs9836291	ENSG00000164078.12	MST1R	-243818	7.2e-05	-0.351331	6e-06
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000233276.3	GPX1	316264	3.46e-05	-0.167258	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000173531.15	MST1	-14634	8.88e-05	0.275113	5e-07
rheumatoid arthritis	3_49674864	rs11130213	ENSG00000164078.12	MST1R	-228980	4.11e-05	-0.358892	5e-07
rheumatoid arthritis	4_25415622	rs3816587	ENSG00000053900.10	ANAPC4	38409	1.86e-09	-0.286195	9e-06
rheumatoid arthritis	4_78581818	rs10028001	ENSG00000138772.12	ANXA3	30299	1.88e-06	-0.225472	7e-06
rheumatoid arthritis	4_78592061	rs2867461	ENSG00000138772.12	ANXA3	40542	8.57e-07	-0.225851	1e-12
rheumatoid arthritis	4_971932	rs13101828	ENSG00000145217.13	SLC26A1	-21508	2.87e-06	-0.347641	1e-08
rheumatoid arthritis	5_103261019	rs26232	ENSG00000175749.11	EIF3KP1	228643	8.53e-08	0.519739	4e-08
rheumatoid arthritis	5_103261591	rs39984	ENSG00000175749.11	EIF3KP1	229215	8.53e-08	0.519739	9e-08
rheumatoid arthritis	5_103261591	rs39984	ENSG00000175749.11	EIF3KP1	229215	8.53e-08	0.519739	3e-06
rheumatoid arthritis	5_103268000	rs403214	ENSG00000175749.11	EIF3KP1	235624	9.88e-08	0.51927	4e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	2.27e-08	0.545642	2e-11
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	2.27e-08	0.545642	5e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	2.27e-08	0.545642	1e-09
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	2.27e-08	0.545642	9e-08
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	2.27e-08	0.545642	6e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	2.27e-08	0.545642	7e-10
rheumatoid arthritis	5_103273223	rs2561477	ENSG00000175749.11	EIF3KP1	240847	2.27e-08	0.545642	1e-10
rheumatoid arthritis	5_132461855	rs6894249	ENSG00000197536.11	IRF1-AS1	51219	8.04e-08	-0.298443	1e-14
rheumatoid arthritis	5_150858959	rs147018773	ENSG00000197083.11	ZNF300P1	-87330	1.25e-15	1.14442	2e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000244731.7	C4A	-596472	1.84e-08	-0.554331	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204525.16	HLA-C	113447	3.97e-05	0.439336	9e-09
rheumatoid arthritis	6_31385552	rs2596565	ENSG00000204338.8	CYP21A1P	-620137	2.02e-13	-1.03162	9e-09
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204435.13	CSNK2B	-10562	7.78e-05	-0.184427	3e-10
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204420.8	MPIG6B	-68515	6.72e-05	-0.469684	3e-10
rheumatoid arthritis	6_31654829	rs805297	ENSG00000204463.12	BAG6	2124	2.84e-11	0.483967	3e-10
rheumatoid arthritis	6_32315077	rs6910071	ENSG00000237541.3	HLA-DQA2	-426265	7.02e-05	0.518554	1e-299
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000196126.11	HLA-DRB1	-181652	6.07e-06	-0.298375	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000237541.3	HLA-DQA2	-333146	3.96e-10	0.744592	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000229391.7	HLA-DRB6	-151826	2.4e-06	0.478623	2e-124
rheumatoid arthritis	6_32408196	rs3763309	ENSG00000204290.10	BTNL2	1068	1.96e-05	-0.546168	2e-124
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000196126.11	HLA-DRB1	-168320	7.61e-05	-0.204042	3e-10
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000237541.3	HLA-DQA2	-319814	2.78e-06	0.44467	3e-10
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000229391.7	HLA-DRB6	-138494	7.87e-06	0.353134	3e-10
rheumatoid arthritis	6_32421528	rs9268557	ENSG00000198502.5	HLA-DRB5	-108759	1.75e-06	-0.403435	3e-10
rheumatoid arthritis	6_32447303	rs3129891	ENSG00000244731.7	C4A	465279	1.19e-05	-0.371454	2e-09
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	3.92e-05	-0.213717	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	3.34e-10	0.585548	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.72e-19	0.655359	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	3.92e-05	-0.213717	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	3.34e-10	0.585548	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.72e-19	0.655359	4e-134
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	3.92e-05	-0.213717	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	3.34e-10	0.585548	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.72e-19	0.655359	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	3.92e-05	-0.213717	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	3.34e-10	0.585548	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.72e-19	0.655359	2e-145
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	3.92e-05	-0.213717	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	3.34e-10	0.585548	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.72e-19	0.655359	3e-07
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	3.92e-05	-0.213717	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	3.34e-10	0.585548	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.72e-19	0.655359	1e-250
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000196126.11	HLA-DRB1	-128853	3.92e-05	-0.213717	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000237541.3	HLA-DQA2	-280347	3.34e-10	0.585548	1e-100
rheumatoid arthritis	6_32460995	rs9268839	ENSG00000229391.7	HLA-DRB6	-99027	1.72e-19	0.655359	1e-100
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000229391.7	HLA-DRB6	-83601	4.97e-19	0.653234	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000237541.3	HLA-DQA2	-264921	5.34e-10	0.583421	5e-58
rheumatoid arthritis	6_32476421	rs12194148	ENSG00000196126.11	HLA-DRB1	-113427	2.52e-05	-0.220097	5e-58
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000237541.3	HLA-DQA2	-255183	7.02e-08	0.532832	6e-227
rheumatoid arthritis	6_32486159	rs112062732	ENSG00000229391.7	HLA-DRB6	-73863	2.64e-15	0.616053	6e-227
rheumatoid arthritis	6_32533367	rs2157337	ENSG00000198502.5	HLA-DRB5	3080	3.2e-16	-0.65051	9e-52
rheumatoid arthritis	6_32593593	rs35139284	ENSG00000237541.3	HLA-DQA2	-147749	1.5e-05	0.476109	4e-287
rheumatoid arthritis	6_32593593	rs35139284	ENSG00000229391.7	HLA-DRB6	33571	8.52e-06	0.405785	4e-287
rheumatoid arthritis	6_32606394	rs615672	ENSG00000232629.8	HLA-DQB2	-157140	4.23e-05	0.365923	8e-27
rheumatoid arthritis	6_32606394	rs615672	ENSG00000198502.5	HLA-DRB5	76107	2.69e-07	-0.434801	8e-27
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	3e-07	0.507464	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.78e-19	0.989413	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	3e-07	0.507464	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.78e-19	0.989413	1e-300
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	3e-07	0.507464	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.78e-19	0.989413	1e-108
rheumatoid arthritis	6_32609603	rs660895	ENSG00000229391.7	HLA-DRB6	49581	3e-07	0.507464	2e-08
rheumatoid arthritis	6_32609603	rs660895	ENSG00000237541.3	HLA-DQA2	-131739	1.78e-19	0.989413	2e-08
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	9.96e-12	0.724888	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	1.5e-20	1.12207	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000179344.16	HLA-DQB1	-53510	3.13e-05	-0.456987	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000196126.11	HLA-DRB1	25025	1.98e-05	-0.30782	2e-10
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000229391.7	HLA-DRB6	54851	9.96e-12	0.724888	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000237541.3	HLA-DQA2	-126469	1.5e-20	1.12207	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000179344.16	HLA-DQB1	-53510	3.13e-05	-0.456987	5e-21
rheumatoid arthritis	6_32614873	rs3104413	ENSG00000196126.11	HLA-DRB1	25025	1.98e-05	-0.30782	5e-21
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000229391.7	HLA-DRB6	55558	9.96e-12	0.724888	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000237541.3	HLA-DQA2	-125762	1.5e-20	1.12207	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000179344.16	HLA-DQB1	-52803	3.13e-05	-0.456987	2e-10
rheumatoid arthritis	6_32615580	rs6931277	ENSG00000196126.11	HLA-DRB1	25732	1.98e-05	-0.30782	2e-10
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000198502.5	HLA-DRB5	85678	2.59e-16	-0.771787	5e-07
rheumatoid arthritis	6_32615965	rs9271348	ENSG00000196126.11	HLA-DRB1	26117	6.29e-05	-0.246625	5e-07
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000237541.3	HLA-DQA2	-112097	1.5e-20	1.12207	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000196126.11	HLA-DRB1	39397	1.98e-05	-0.30782	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000229391.7	HLA-DRB6	69223	9.96e-12	0.724888	3e-11
rheumatoid arthritis	6_32629245	rs3129769	ENSG00000179344.16	HLA-DQB1	-39138	3.13e-05	-0.456987	3e-11
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	5.17e-08	0.514113	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000229391.7	HLA-DRB6	136052	3.72e-05	0.329773	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000232629.8	HLA-DQB2	-67460	7.82e-08	0.470789	1e-09
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000237541.3	HLA-DQA2	-45268	5.17e-08	0.514113	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000229391.7	HLA-DRB6	136052	3.72e-05	0.329773	5e-75
rheumatoid arthritis	6_32696074	rs6457617	ENSG00000232629.8	HLA-DQB2	-67460	7.82e-08	0.470789	5e-75
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000232629.8	HLA-DQB2	-67312	7.82e-08	0.470789	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000237541.3	HLA-DQA2	-45120	5.17e-08	0.514113	4e-186
rheumatoid arthritis	6_32696222	rs6457620	ENSG00000229391.7	HLA-DRB6	136200	3.72e-05	0.329773	4e-186
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000237541.3	HLA-DQA2	-42012	9.28e-09	1.00884	2e-06
rheumatoid arthritis	6_32699330	rs9275334	ENSG00000229391.7	HLA-DRB6	139308	7.42e-06	0.666946	2e-06
rheumatoid arthritis	6_32703326	rs13192471	ENSG00000204287.13	HLA-DRA	263484	8.98e-08	0.306229	2e-58
rheumatoid arthritis	6_32703326	rs13192471	ENSG00000204290.10	BTNL2	296198	1.45e-05	0.637556	2e-58
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000229391.7	HLA-DRB6	145775	7.42e-06	0.666946	2e-06
rheumatoid arthritis	6_32705797	rs9275495	ENSG00000237541.3	HLA-DQA2	-35545	9.28e-09	1.00884	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000229391.7	HLA-DRB6	147724	7.42e-06	0.666946	2e-06
rheumatoid arthritis	6_32707746	rs9275530	ENSG00000237541.3	HLA-DQA2	-33596	9.28e-09	1.00884	2e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000229391.7	HLA-DRB6	147835	7.42e-06	0.666946	5e-06
rheumatoid arthritis	6_32707857	rs9275532	ENSG00000237541.3	HLA-DQA2	-33485	9.28e-09	1.00884	5e-06
rheumatoid arthritis	6_32713151	rs7765379	ENSG00000237541.3	HLA-DQA2	-28191	5.05e-05	0.651309	5e-23
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000229391.7	HLA-DRB6	153684	7.42e-06	0.666946	2e-06
rheumatoid arthritis	6_32713706	rs7454108	ENSG00000237541.3	HLA-DQA2	-27636	9.28e-09	1.00884	2e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000237541.3	HLA-DQA2	-27589	9.28e-09	1.00884	1e-06
rheumatoid arthritis	6_32713753	rs3957146	ENSG00000229391.7	HLA-DRB6	153731	7.42e-06	0.666946	1e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000237541.3	HLA-DQA2	-27100	9.28e-09	1.00884	2e-06
rheumatoid arthritis	6_32714242	rs3998159	ENSG00000229391.7	HLA-DRB6	154220	7.42e-06	0.666946	2e-06
rheumatoid arthritis	7_101299780	rs10275421	ENSG00000232445.1	EMSLR	-8566	5.4e-05	0.6688	8e-09
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	8.67e-08	-0.378912	6e-06
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	8.67e-08	-0.378912	2e-06
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	8.67e-08	-0.378912	3e-09
rheumatoid arthritis	7_28135367	rs67250450	ENSG00000234336.6	JAZF1-AS1	-44955	8.67e-08	-0.378912	4e-09
rheumatoid arthritis	8_11480861	rs2618444	ENSG00000227888.4	FAM66A	-881158	1.56e-07	0.660448	7e-12
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	5.28e-07	0.630248	4e-13
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	5.28e-07	0.630248	2e-07
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	5.28e-07	0.630248	5e-22
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	5.28e-07	0.630248	2e-06
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	5.28e-07	0.630248	8e-08
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	5.28e-07	0.630248	3e-13
rheumatoid arthritis	8_11484371	rs2736337	ENSG00000227888.4	FAM66A	-877648	5.28e-07	0.630248	2e-07
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000227888.4	FAM66A	-875555	9.37e-08	0.664602	6e-09
rheumatoid arthritis	8_11486464	rs2736340	ENSG00000227888.4	FAM66A	-875555	9.37e-08	0.664602	9e-12
rheumatoid arthritis	8_11488036	rs4840565	ENSG00000227888.4	FAM66A	-873983	9.2e-07	0.543279	4e-06
rheumatoid arthritis	8_11491452	rs9693589	ENSG00000227888.4	FAM66A	-870567	1.19e-07	0.665224	2e-18
rheumatoid arthritis	8_11502129	rs1600249	ENSG00000227888.4	FAM66A	-859890	1.96e-06	0.569933	5e-06
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	1.36e-08	-0.595636	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	2.75e-09	0.280137	2e-08
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	1.36e-08	-0.595636	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	2.75e-09	0.280137	5e-11
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	1.36e-08	-0.595636	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	2.75e-09	0.280137	3e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000226752.9	CUTALP	49015	1.36e-08	-0.595636	4e-09
rheumatoid arthritis	9_120873843	rs10985070	ENSG00000056558.10	TRAF1	-55330	2.75e-09	0.280137	4e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000226752.9	CUTALP	64195	9.92e-10	-0.653598	3e-09
rheumatoid arthritis	9_120889023	rs2072438	ENSG00000056558.10	TRAF1	-40150	8.48e-08	0.262142	3e-09
rheumatoid arthritis	9_120890620	rs881375	ENSG00000056558.10	TRAF1	-38553	1.69e-22	0.422898	4e-08
rheumatoid arthritis	9_120890620	rs881375	ENSG00000095261.13	PSMD5	47636	6.3e-05	-0.295008	4e-08
rheumatoid arthritis	9_120890620	rs881375	ENSG00000226752.9	CUTALP	65792	3.03e-08	-0.586644	4e-08
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000056558.10	TRAF1	-28833	4.55e-08	0.267312	4e-12
rheumatoid arthritis	9_120900340	rs10760126	ENSG00000226752.9	CUTALP	75512	9.38e-10	-0.654972	4e-12
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000056558.10	TRAF1	-23252	2.55e-23	0.430152	1e-10
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000095261.13	PSMD5	62937	8.61e-05	-0.2907	1e-10
rheumatoid arthritis	9_120905921	rs10435844	ENSG00000226752.9	CUTALP	81093	2.66e-08	-0.590652	1e-10
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	1.09e-09	-0.620657	4e-07
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000056558.10	TRAF1	-7882	3.29e-11	0.30165	4e-07
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000226752.9	CUTALP	96463	1.09e-09	-0.620657	2e-08
rheumatoid arthritis	9_120921291	rs2269060	ENSG00000056558.10	TRAF1	-7882	3.29e-11	0.30165	2e-08
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	6.6e-10	-0.624834	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000056558.10	TRAF1	-1212	1.48e-11	0.304733	2e-07
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000226752.9	CUTALP	103133	6.6e-10	-0.624834	4e-14
rheumatoid arthritis	9_120927961	rs3761847	ENSG00000056558.10	TRAF1	-1212	1.48e-11	0.304733	4e-14
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000056558.10	TRAF1	3831	6.59e-23	0.429169	2e-06
rheumatoid arthritis	9_120933004	rs10739580	ENSG00000226752.9	CUTALP	108176	9.17e-09	-0.610886	2e-06
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000056558.10	TRAF1	14931	6.59e-23	0.429169	6e-09
rheumatoid arthritis	9_120944104	rs2900180	ENSG00000226752.9	CUTALP	119276	9.17e-09	-0.610886	6e-09
rheumatoid arthritis	9_136378050	rs3812565	ENSG00000213221.4	DNLZ	14261	2.46e-06	-0.328214	2e-09
rheumatoid arthritis	9_136378050	rs3812565	ENSG00000148384.12	INPP5E	-61773	9.75e-12	-0.392912	2e-09
rheumatoid arthritis	9_136395373	rs4266763	ENSG00000148384.12	INPP5E	-44450	5.25e-11	-0.395326	1e-13
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000126903.15	SLC10A3	-454674	0.000121361	-0.26251	5e-16
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000126903.15	SLC10A3	-454674	0.000121361	-0.26251	3e-12
rheumatoid arthritis	X_154036016	rs5987194	ENSG00000126903.15	SLC10A3	-454674	0.000121361	-0.26251	4e-22