DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE schizophrenia 1_147611315 rs583583 ENSG00000162836.11 ACP6 -59181 9.63e-12 0.589182 6e-07 schizophrenia 1_154877295 rs12069356 ENSG00000225855.6 RUSC1-AS1 -444392 5.54e-05 -0.263046 2e-06 schizophrenia 1_159199673 rs3027001 ENSG00000179639.10 FCER1A -90041 3.61e-05 0.483477 2e-08 schizophrenia 1_173677634 rs61826793 ENSG00000117601.13 SERPINC1 -239744 6.81e-05 0.643837 4e-08 schizophrenia 1_173677634 rs61826793 ENSG00000162753.11 SLC9C2 74863 2.14e-07 0.454574 4e-08 schizophrenia 1_174046121 rs6701877 ENSG00000117601.13 SERPINC1 128743 8.57e-05 0.522593 6e-10 schizophrenia 1_174046123 rs61826828 ENSG00000117601.13 SERPINC1 128745 8.57e-05 0.522593 9e-06 schizophrenia 1_205066327 rs16937 ENSG00000117222.13 RBBP5 -55688 4.65e-06 -0.238993 5e-07 schizophrenia 1_207803738 rs7523273 ENSG00000117335.19 CD46 51681 1.39e-12 -0.325969 7e-08 schizophrenia 1_207803738 rs7523273 ENSG00000117335.19 CD46 51681 1.39e-12 -0.325969 4e-07 schizophrenia 1_207803738 rs7523273 ENSG00000117335.19 CD46 51681 1.39e-12 -0.325969 6e-07 schizophrenia 1_207803738 rs7523273 ENSG00000117335.19 CD46 51681 1.39e-12 -0.325969 3e-07 schizophrenia 1_207803738 rs7523273 ENSG00000117335.19 CD46 51681 1.39e-12 -0.325969 3e-07 schizophrenia 1_207803738 rs7523273 ENSG00000117335.19 CD46 51681 1.39e-12 -0.325969 4e-08 schizophrenia 1_207844729 rs10863593 ENSG00000117335.19 CD46 92672 1.46e-14 -0.360113 3e-07 schizophrenia 1_211436426 rs35771425 ENSG00000236809.2 SNX25P1 19401 1.42e-06 0.602801 5e-12 schizophrenia 1_213974546 rs7529073 ENSG00000230461.8 PROX1-AS1 -13954 4.44e-08 -0.244621 6e-06 schizophrenia 1_213974546 rs7529073 ENSG00000230461.8 PROX1-AS1 -13954 4.44e-08 -0.244621 3e-07 schizophrenia 1_213974546 rs7529073 ENSG00000230461.8 PROX1-AS1 -13954 4.44e-08 -0.244621 6e-07 schizophrenia 1_213974546 rs7529073 ENSG00000230461.8 PROX1-AS1 -13954 4.44e-08 -0.244621 1e-07 schizophrenia 1_22103576 rs2143103 ENSG00000218510.6 LINC00339 79045 9.66e-06 0.604825 3e-09 schizophrenia 1_43974474 rs4660761 ENSG00000117407.16 ARTN 41154 3.97e-07 -0.566667 5e-09 schizophrenia 1_8362616 rs2252865 ENSG00000142599.17 RERE -455027 1.12e-06 -0.26033 3e-06 schizophrenia 1_8362616 rs2252865 ENSG00000142599.17 RERE -455027 1.12e-06 -0.26033 5e-07 schizophrenia 1_8424168 rs159961 ENSG00000142599.17 RERE -393475 5.59e-06 0.242134 4e-10 schizophrenia 1_8427263 rs301797 ENSG00000142599.17 RERE -390380 4.88e-06 0.240426 2e-12 schizophrenia 1_8427263 rs301797 ENSG00000142599.17 RERE -390380 4.88e-06 0.240426 5e-09 schizophrenia 1_8428505 rs301798 ENSG00000142599.17 RERE -389138 5.59e-06 0.242134 7e-09 schizophrenia 1_8429242 rs301799 ENSG00000142599.17 RERE -388401 8.64e-06 0.20789 2e-08 schizophrenia 1_8430260 rs302719 ENSG00000142599.17 RERE -387383 2.71e-06 0.247522 3e-10 schizophrenia 1_8435530 rs172531 ENSG00000142599.17 RERE -382113 5.59e-06 0.242134 5e-11 schizophrenia 1_8435530 rs172531 ENSG00000142599.17 RERE -382113 5.59e-06 0.242134 1e-09 schizophrenia 1_8435530 rs172531 ENSG00000142599.17 RERE -382113 5.59e-06 0.242134 5e-12 schizophrenia 1_8435530 rs172531 ENSG00000142599.17 RERE -382113 5.59e-06 0.242134 3e-08 schizophrenia 1_8443182 rs301818 ENSG00000142599.17 RERE -374461 1.7e-05 0.238013 1e-09 schizophrenia 10_100146576 rs975752 ENSG00000196072.11 BLOC1S2 -140136 4.14e-07 -0.336438 5e-06 schizophrenia 10_100152437 rs1408579 ENSG00000095485.16 CWF19L1 -115243 1.23e-11 0.574851 2e-08 schizophrenia 10_102852578 rs11191419 ENSG00000214435.7 AS3MT -16938 9.14e-11 -0.620586 6e-19 schizophrenia 10_102852578 rs11191419 ENSG00000166275.15 BORCS7 -1645 1.12e-06 -0.247392 6e-19 schizophrenia 10_102852578 rs11191419 ENSG00000214435.7 AS3MT -16938 9.14e-11 -0.620586 1e-16 schizophrenia 10_102852578 rs11191419 ENSG00000166275.15 BORCS7 -1645 1.12e-06 -0.247392 1e-16 schizophrenia 10_102852578 rs11191419 ENSG00000214435.7 AS3MT -16938 9.14e-11 -0.620586 3e-18 schizophrenia 10_102852578 rs11191419 ENSG00000166275.15 BORCS7 -1645 1.12e-06 -0.247392 3e-18 schizophrenia 10_102866129 rs11191424 ENSG00000166275.15 BORCS7 11906 2.88e-06 -0.23373 4e-20 schizophrenia 10_102866129 rs11191424 ENSG00000214435.7 AS3MT -3387 8.35e-10 -0.580527 4e-20 schizophrenia 10_102866129 rs11191424 ENSG00000166275.15 BORCS7 11906 2.88e-06 -0.23373 3e-16 schizophrenia 10_102866129 rs11191424 ENSG00000214435.7 AS3MT -3387 8.35e-10 -0.580527 3e-16 schizophrenia 10_102900247 rs11191454 ENSG00000076685.18 NT5C2 -293059 6.82e-05 0.368578 1e-08 schizophrenia 10_102989968 rs10883816 ENSG00000214435.7 AS3MT 120452 3.42e-07 -0.495425 4e-11 schizophrenia 10_103016151 rs7914558 ENSG00000214435.7 AS3MT 146635 2.73e-07 -0.496061 2e-09 schizophrenia 10_103016151 rs7914558 ENSG00000214435.7 AS3MT 146635 2.73e-07 -0.496061 2e-08 schizophrenia 10_103033891 rs75970938 ENSG00000076685.18 NT5C2 -159415 6.82e-05 0.368578 2e-25 schizophrenia 10_103089359 rs10786736 ENSG00000076685.18 NT5C2 -103947 4.09e-05 0.309781 5e-11 schizophrenia 10_103089359 rs10786736 ENSG00000076685.18 NT5C2 -103947 4.09e-05 0.309781 8e-12 schizophrenia 10_103089359 rs10786736 ENSG00000076685.18 NT5C2 -103947 4.09e-05 0.309781 4e-17 schizophrenia 10_103111522 rs10883832 ENSG00000076685.18 NT5C2 -81784 5.9e-05 0.359359 2e-16 schizophrenia 10_103111522 rs10883832 ENSG00000076685.18 NT5C2 -81784 5.9e-05 0.359359 3e-14 schizophrenia 10_103146454 rs11191580 ENSG00000076685.18 NT5C2 -46852 6.82e-05 0.368578 1e-08 schizophrenia 10_103146454 rs11191580 ENSG00000076685.18 NT5C2 -46852 6.82e-05 0.368578 3e-08 schizophrenia 10_103146454 rs11191580 ENSG00000076685.18 NT5C2 -46852 6.82e-05 0.368578 2e-09 schizophrenia 10_103153896 rs11191582 ENSG00000076685.18 NT5C2 -39410 6.82e-05 0.368578 4e-14 schizophrenia 10_103153896 rs11191582 ENSG00000076685.18 NT5C2 -39410 6.82e-05 0.368578 3e-17 schizophrenia 10_103169157 rs12416331 ENSG00000076685.18 NT5C2 -24149 5.9e-05 0.359359 7e-18 schizophrenia 10_103192742 rs79780963 ENSG00000076685.18 NT5C2 -564 5.9e-05 0.359359 3e-14 schizophrenia 10_103192742 rs79780963 ENSG00000076685.18 NT5C2 -564 5.9e-05 0.359359 3e-14 schizophrenia 10_103300139 rs11191648 ENSG00000076685.18 NT5C2 106833 1.64e-05 0.368092 5e-09 schizophrenia 11_130848816 rs10791098 ENSG00000120451.10 SNX19 -67693 4.16e-13 -0.521648 2e-12 schizophrenia 11_130848918 rs10791099 ENSG00000120451.10 SNX19 -67591 4.16e-13 -0.521648 1e-08 schizophrenia 11_130849166 rs10750450 ENSG00000120451.10 SNX19 -67343 4.16e-13 -0.521648 7e-13 schizophrenia 11_130861542 rs73022874 ENSG00000120451.10 SNX19 -54967 3.9e-14 0.586192 5e-10 schizophrenia 11_130935439 rs7112616 ENSG00000120451.10 SNX19 18930 5.18e-07 -0.366067 2e-09 schizophrenia 11_130941461 rs35774874 ENSG00000120451.10 SNX19 24952 2.01e-07 -0.371725 2e-09 schizophrenia 11_130941461 rs35774874 ENSG00000120451.10 SNX19 24952 2.01e-07 -0.371725 2e-11 schizophrenia 11_130947684 rs7940866 ENSG00000120451.10 SNX19 31175 1.16e-06 -0.337057 2e-09 schizophrenia 11_130960853 rs10894294 ENSG00000120451.10 SNX19 44344 1.89e-08 -0.396457 3e-06 schizophrenia 11_130960853 rs10894294 ENSG00000120451.10 SNX19 44344 1.89e-08 -0.396457 3e-07 schizophrenia 11_130976537 rs10791106 ENSG00000120451.10 SNX19 60028 8.64e-08 -0.384054 1e-15 schizophrenia 11_130986204 rs10791111 ENSG00000120451.10 SNX19 69695 1.04e-07 -0.385932 1e-08 schizophrenia 11_131022000 rs10894308 ENSG00000120451.10 SNX19 105491 4.05e-08 -0.389803 9e-09 schizophrenia 11_131022000 rs10894308 ENSG00000120451.10 SNX19 105491 4.05e-08 -0.389803 2e-08 schizophrenia 11_131022000 rs10894308 ENSG00000120451.10 SNX19 105491 4.05e-08 -0.389803 2e-08 schizophrenia 11_30245491 rs515997 ENSG00000152219.4 ARL14EP -77560 1.13e-06 0.209577 3e-09 schizophrenia 11_30357012 rs1765142 ENSG00000152219.4 ARL14EP 33961 2.28e-06 0.196613 2e-06 schizophrenia 11_49681564 rs11040472 ENSG00000205035.8 GRM5P1 123018 1.64e-10 0.346444 3e-06 schizophrenia 11_49681564 rs11040472 ENSG00000255190.2 TRIM51DP -193381 8.18e-15 0.664554 3e-06 schizophrenia 11_49681564 rs11040472 ENSG00000205035.8 GRM5P1 123018 1.64e-10 0.346444 3e-06 schizophrenia 11_49681564 rs11040472 ENSG00000255190.2 TRIM51DP -193381 8.18e-15 0.664554 3e-06 schizophrenia 11_61851136 rs174592 ENSG00000149485.18 FADS1 21818 2.54e-08 -0.308414 6e-09 schizophrenia 11_65616284 rs58950470 ENSG00000172922.8 RNASEH2C -104663 1.58e-07 -0.220086 3e-06 schizophrenia 11_8877853 rs2455601 ENSG00000254860.5 TMEM9B-AS1 -86921 3.52e-05 -0.520598 7e-06 schizophrenia 12_48995537 rs1054442 ENSG00000239617.1 RPL32P27 91724 1.29e-05 -0.302985 4e-08 schizophrenia 12_50168215 rs11169294 ENSG00000139624.12 CERS5 682 3.73e-08 0.326699 2e-08 schizophrenia 12_50187864 rs7301566 ENSG00000139624.12 CERS5 20331 8.43e-06 -0.27577 3e-08 schizophrenia 12_50201164 rs4459386 ENSG00000139624.12 CERS5 33631 1.56e-05 -0.26943 5e-06 schizophrenia 12_56055651 rs7302200 ENSG00000197728.9 RPS26 13798 2.89e-27 0.974392 1e-14 schizophrenia 12_56055651 rs7302200 ENSG00000139531.12 SUOX 58471 8.63e-06 -0.314576 1e-14 schizophrenia 12_76927801 rs7302529 ENSG00000175183.9 CSRP2 48741 1.97e-05 0.309134 5e-06 schizophrenia 12_76927801 rs7302529 ENSG00000175183.9 CSRP2 48741 1.97e-05 0.309134 7e-07 schizophrenia 12_76927801 rs7302529 ENSG00000175183.9 CSRP2 48741 1.97e-05 0.309134 2e-07 schizophrenia 12_76927801 rs7302529 ENSG00000175183.9 CSRP2 48741 1.97e-05 0.309134 2e-06 schizophrenia 12_76927801 rs7302529 ENSG00000175183.9 CSRP2 48741 1.97e-05 0.309134 4e-06 schizophrenia 12_76927801 rs7302529 ENSG00000175183.9 CSRP2 48741 1.97e-05 0.309134 7e-06 schizophrenia 12_76927801 rs7302529 ENSG00000175183.9 CSRP2 48741 1.97e-05 0.309134 9e-06 schizophrenia 12_76927801 rs7302529 ENSG00000175183.9 CSRP2 48741 1.97e-05 0.309134 9e-07 schizophrenia 13_114134675 rs3812831 ENSG00000283361.1 CFAP97D2 -44563 2.12e-05 0.25075 1e-06 schizophrenia 13_43898119 rs7321596 ENSG00000179630.10 LACC1 18835 2.04e-09 -0.377046 3e-08 schizophrenia 13_44132132 rs9595066 ENSG00000227258.5 SMIM2-AS1 21681 1.35e-13 -0.974645 4e-06 schizophrenia 13_44132132 rs9595066 ENSG00000227258.5 SMIM2-AS1 21681 1.35e-13 -0.974645 1e-08 schizophrenia 13_49605318 rs7322886 ENSG00000136144.11 RCBTB1 19735 3.49e-16 0.388104 2e-08 schizophrenia 14_103345983 rs12432904 ENSG00000259775.1 EIF5-DT 13616 2.9e-10 0.381371 4e-06 schizophrenia 14_103554804 rs4906335 ENSG00000256053.7 COA8 -8158 1.06e-06 -0.249406 9e-16 schizophrenia 14_103585720 rs35229468 ENSG00000256053.7 COA8 22758 8.69e-07 -0.251795 2e-13 schizophrenia 14_103748005 rs4906364 ENSG00000256053.7 COA8 185043 1e-05 -0.226978 3e-12 schizophrenia 14_103748005 rs4906364 ENSG00000256053.7 COA8 185043 1e-05 -0.226978 2e-10 schizophrenia 14_103762504 rs7142769 ENSG00000256053.7 COA8 199542 1.93e-06 -0.247832 6e-11 schizophrenia 14_22912771 rs9989230 ENSG00000092036.18 HAUS4 -44390 8.39e-13 -0.396768 4e-12 schizophrenia 14_22912771 rs9989230 ENSG00000100461.17 RBM23 -5031 1.93e-05 0.299083 4e-12 schizophrenia 14_22912771 rs9989230 ENSG00000257285.5 PRMT5-DT -16838 1.04e-05 0.3737 4e-12 schizophrenia 14_70894697 rs989501 ENSG00000100731.15 PCNX1 -12708 6.56e-09 0.375393 1e-11 schizophrenia 14_70907985 rs2526882 ENSG00000100731.15 PCNX1 580 3.46e-07 0.34421 2e-07 schizophrenia 14_70907985 rs2526882 ENSG00000100731.15 PCNX1 580 3.46e-07 0.34421 1e-06 schizophrenia 14_70921681 rs2189806 ENSG00000100731.15 PCNX1 14276 1.44e-07 0.350083 5e-10 schizophrenia 14_71134362 rs221902 ENSG00000100731.15 PCNX1 226957 7.66e-07 0.335786 4e-08 schizophrenia 14_81209076 rs2099108 ENSG00000140022.9 STON2 -227389 1.56e-05 -0.185367 3e-08 schizophrenia 14_81240713 rs8016982 ENSG00000140022.9 STON2 -195752 5.84e-06 -0.194891 7e-06 schizophrenia 15_52594765 rs4776059 ENSG00000047346.12 FAM214A -115052 3.24e-06 0.258705 4e-06 schizophrenia 15_58907738 rs17302045 ENSG00000245975.2 MINDY2-DT 136764 2.02e-05 -0.411849 4e-06 schizophrenia 15_78515530 rs28437878 ENSG00000169684.13 CHRNA5 -49990 9.17e-06 -0.570655 2e-10 schizophrenia 15_78602417 rs3743078 ENSG00000169684.13 CHRNA5 36897 6.82e-06 0.491725 1e-12 schizophrenia 15_78602417 rs3743078 ENSG00000169684.13 CHRNA5 36897 6.82e-06 0.491725 3e-12 schizophrenia 15_78602417 rs3743078 ENSG00000169684.13 CHRNA5 36897 6.82e-06 0.491725 1e-12 schizophrenia 15_82558175 rs17507216 ENSG00000278662.4 GOLGA6L10 208700 1.26e-06 -0.652432 4e-10 schizophrenia 15_82558175 rs17507216 ENSG00000197978.9 GOLGA6L9 128155 7.39e-06 0.470206 4e-10 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 1.23e-06 -0.564386 5e-12 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 1.23e-06 -0.564386 2e-11 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 1.23e-06 -0.564386 1e-10 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 1.23e-06 -0.564386 3e-11 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 1.23e-06 -0.564386 2e-11 schizophrenia 15_84137308 rs66486766 ENSG00000225151.10 GOLGA2P7 -92828 4.15e-07 -0.584971 5e-11 schizophrenia 15_84137308 rs66486766 ENSG00000225151.10 GOLGA2P7 -92828 4.15e-07 -0.584971 1e-11 schizophrenia 15_84562751 rs12902973 ENSG00000225151.10 GOLGA2P7 332615 6.25e-11 -0.714257 9e-11 schizophrenia 15_84562751 rs12902973 ENSG00000259295.6 CSPG4P12 -628687 5.37e-07 0.571421 9e-11 schizophrenia 15_84562751 rs12902973 ENSG00000225151.10 GOLGA2P7 332615 6.25e-11 -0.714257 4e-10 schizophrenia 15_84562751 rs12902973 ENSG00000259295.6 CSPG4P12 -628687 5.37e-07 0.571421 4e-10 schizophrenia 15_84581411 rs11633534 ENSG00000225151.10 GOLGA2P7 351275 3.47e-10 -0.704183 8e-14 schizophrenia 15_84581411 rs11633534 ENSG00000259295.6 CSPG4P12 -610027 2.24e-06 0.553305 8e-14 schizophrenia 15_84594463 rs11638445 ENSG00000225151.10 GOLGA2P7 364327 1.15e-10 -0.72414 3e-10 schizophrenia 15_84594463 rs11638445 ENSG00000259295.6 CSPG4P12 -596975 7.65e-07 0.579026 3e-10 schizophrenia 15_84606344 rs748455 ENSG00000259295.6 CSPG4P12 -585094 3.82e-05 0.487198 6e-13 schizophrenia 15_84606344 rs748455 ENSG00000177082.12 WDR73 -47999 9.97e-06 -0.447485 6e-13 schizophrenia 15_84606344 rs748455 ENSG00000225151.10 GOLGA2P7 376208 1.81e-06 -0.553417 6e-13 schizophrenia 15_84664594 rs12908161 ENSG00000177082.12 WDR73 10251 7.26e-06 -0.470147 9e-10 schizophrenia 15_84664594 rs12908161 ENSG00000225151.10 GOLGA2P7 434458 3.89e-06 -0.556115 9e-10 schizophrenia 15_84664594 rs12908161 ENSG00000177082.12 WDR73 10251 7.26e-06 -0.470147 5e-10 schizophrenia 15_84664594 rs12908161 ENSG00000225151.10 GOLGA2P7 434458 3.89e-06 -0.556115 5e-10 schizophrenia 15_84806000 rs35630683 ENSG00000177082.12 WDR73 151657 6.89e-06 -0.468365 5e-09 schizophrenia 15_84806000 rs35630683 ENSG00000225151.10 GOLGA2P7 575864 7.38e-06 -0.537928 5e-09 schizophrenia 15_84812610 rs35828350 ENSG00000177082.12 WDR73 158267 6.89e-06 -0.468365 6e-11 schizophrenia 15_84812610 rs35828350 ENSG00000225151.10 GOLGA2P7 582474 7.38e-06 -0.537928 6e-11 schizophrenia 16_11983775 rs12922317 ENSG00000234719.8 NPIPB2 7132 4.08e-26 1.02537 9e-07 schizophrenia 16_15062041 rs2966157 ENSG00000183793.13 NPIPA5 -319006 1.37e-08 0.668106 6e-11 schizophrenia 16_15724453 rs11130 ENSG00000072864.14 NDE1 81186 7.39e-06 0.163243 4e-08 schizophrenia 16_22053074 rs1962636 ENSG00000248124.7 RRN3P1 232664 4.62e-05 -0.299871 8e-06 schizophrenia 16_23629146 rs249954 ENSG00000103356.15 EARS2 71785 9.28e-06 -0.260562 2e-06 schizophrenia 16_28874338 rs7359397 ENSG00000233232.6 NPIPB7 403163 1.46e-05 -0.475717 7e-11 schizophrenia 16_28874338 rs7359397 ENSG00000196502.11 SULT1A1 250713 1.3e-06 -0.345164 7e-11 schizophrenia 16_28874338 rs7359397 ENSG00000178952.10 TUFM 27930 8.14e-08 0.254629 7e-11 schizophrenia 16_28874338 rs7359397 ENSG00000197165.10 SULT1A2 277229 4.33e-09 0.566747 7e-11 schizophrenia 16_4419283 rs13335685 ENSG00000262246.5 CORO7 -6422 3.94e-10 0.336592 6e-10 schizophrenia 16_4420026 rs6500596 ENSG00000153406.13 NMRAL1 -75737 6.11e-06 -0.379974 5e-09 schizophrenia 16_4420026 rs6500596 ENSG00000262246.5 CORO7 -5679 3.66e-12 0.395147 5e-09 schizophrenia 16_4420026 rs6500596 ENSG00000153406.13 NMRAL1 -75737 6.11e-06 -0.379974 1e-06 schizophrenia 16_4420026 rs6500596 ENSG00000262246.5 CORO7 -5679 3.66e-12 0.395147 1e-06 schizophrenia 16_4420026 rs6500596 ENSG00000153406.13 NMRAL1 -75737 6.11e-06 -0.379974 2e-07 schizophrenia 16_4420026 rs6500596 ENSG00000262246.5 CORO7 -5679 3.66e-12 0.395147 2e-07 schizophrenia 16_4447450 rs6500602 ENSG00000262246.5 CORO7 21745 1.83e-08 0.306662 3e-07 schizophrenia 16_69940756 rs3748386 ENSG00000226232.8 NPIPB14P -55432 4.13e-14 -0.682836 6e-09 schizophrenia 16_89806562 rs12449000 ENSG00000260259.1 LINC02166 119993 2.08e-05 -0.329476 5e-06 schizophrenia 17_12993236 rs9908102 ENSG00000006744.18 ELAC2 -24951 1.94e-13 0.483605 2e-06 schizophrenia 17_17807956 rs4925114 ENSG00000175662.17 TOM1L2 -164466 2.36e-05 0.156427 3e-09 schizophrenia 17_17807956 rs4925114 ENSG00000175662.17 TOM1L2 -164466 2.36e-05 0.156427 3e-08 schizophrenia 17_18009234 rs4365348 ENSG00000175662.17 TOM1L2 36812 3.79e-05 -0.1419 7e-09 schizophrenia 17_18046488 rs12948749 ENSG00000175662.17 TOM1L2 74066 1.5e-05 0.149284 2e-09 schizophrenia 17_18055088 rs8082590 ENSG00000175662.17 TOM1L2 82666 1.5e-05 0.150657 2e-08 schizophrenia 17_18055088 rs8082590 ENSG00000175662.17 TOM1L2 82666 1.5e-05 0.150657 9e-10 schizophrenia 17_18055088 rs8082590 ENSG00000175662.17 TOM1L2 82666 1.5e-05 0.150657 7e-10 schizophrenia 17_18055088 rs8082590 ENSG00000175662.17 TOM1L2 82666 1.5e-05 0.150657 3e-08 schizophrenia 17_18055088 rs8082590 ENSG00000175662.17 TOM1L2 82666 1.5e-05 0.150657 2e-08 schizophrenia 17_2221430 rs2131700 ENSG00000167720.12 SRR -81953 6e-12 -0.530541 2e-08 schizophrenia 17_2305605 rs4523957 ENSG00000167720.12 SRR 2222 2.84e-06 -0.31922 1e-09 schizophrenia 17_2305605 rs4523957 ENSG00000167720.12 SRR 2222 2.84e-06 -0.31922 7e-10 schizophrenia 17_2305605 rs4523957 ENSG00000167720.12 SRR 2222 2.84e-06 -0.31922 4e-09 schizophrenia 17_2305605 rs4523957 ENSG00000167720.12 SRR 2222 2.84e-06 -0.31922 3e-09 schizophrenia 17_2305605 rs4523957 ENSG00000167720.12 SRR 2222 2.84e-06 -0.31922 3e-10 schizophrenia 17_2305605 rs4523957 ENSG00000167720.12 SRR 2222 2.84e-06 -0.31922 1e-09 schizophrenia 17_2305605 rs4523957 ENSG00000167720.12 SRR 2222 2.84e-06 -0.31922 6e-08 schizophrenia 17_36544271 rs12941866 ENSG00000278311.4 GGNBP2 -617 2.38e-05 0.220605 3e-08 schizophrenia 17_36544271 rs12941866 ENSG00000278535.4 DHRS11 -47527 6.57e-14 -0.354125 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000120088.14 CRHR1 -117302 5.96e-05 0.216379 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000185829.17 ARL17A -912704 1.8e-08 -0.579707 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000264070.1 DND1P1 81107 1.4e-14 -0.835416 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000204650.14 LINC02210 46650 2.09e-22 -0.664635 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000214401.4 KANSL1-AS1 -526598 4.99e-20 -0.912114 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000238083.7 LRRC37A2 -844533 1.17e-25 -1.01966 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000262500.1 MAPK8IP1P1 -576628 2.55e-23 -1.03366 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000176681.14 LRRC37A -625755 2e-07 -0.593777 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000214425.7 LRRC37A4P 116643 1.75e-28 1.00563 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000263503.1 MAPK8IP1P2 64638 6.9e-20 -1.02025 3e-08 schizophrenia 17_45779092 rs35076622 ENSG00000204650.14 LINC02210 158764 2.27e-13 0.540753 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000238083.7 LRRC37A2 -732419 6.23e-13 0.779696 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000264070.1 DND1P1 193221 6.09e-09 0.66418 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000214425.7 LRRC37A4P 228757 5.48e-14 -0.770174 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000262500.1 MAPK8IP1P1 -464514 2.69e-13 0.827032 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000214401.4 KANSL1-AS1 -414484 1.43e-13 0.778737 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000263503.1 MAPK8IP1P2 176752 1.55e-14 0.900291 3e-12 schizophrenia 17_46784796 rs199503 ENSG00000238083.7 LRRC37A2 273285 1.23e-24 1.08903 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000262500.1 MAPK8IP1P1 541190 1.01e-23 1.12587 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000176681.14 LRRC37A 492063 6.95e-07 0.616484 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000214401.4 KANSL1-AS1 591220 7.38e-31 1.14326 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000185829.17 ARL17A 205114 6.32e-08 0.605895 3e-09 schizophrenia 17_48763179 rs7219021 ENSG00000170703.15 TTLL6 -54035 2.77e-08 0.518182 1e-07 schizophrenia 18_12947463 rs3809912 ENSG00000101639.18 CEP192 -43899 1.25e-26 -0.803914 1e-08 schizophrenia 18_79862879 rs28735056 ENSG00000261126.7 RBFADN -184021 9.87e-08 -0.580685 1e-12 schizophrenia 18_79862879 rs28735056 ENSG00000261126.7 RBFADN -184021 9.87e-08 -0.580685 5e-09 schizophrenia 18_79862879 rs28735056 ENSG00000261126.7 RBFADN -184021 9.87e-08 -0.580685 5e-10 schizophrenia 18_79862996 rs11665111 ENSG00000261126.7 RBFADN -183904 6.86e-06 0.485082 1e-08 schizophrenia 18_79928124 rs55642704 ENSG00000261126.7 RBFADN -118776 8.99e-09 -0.574922 4e-11 schizophrenia 19_48703346 rs281377 ENSG00000176909.11 MAMSTR -16375 5.38e-06 -0.353372 2e-08 schizophrenia 19_48704000 rs603985 ENSG00000176909.11 MAMSTR -15721 1.19e-07 0.41965 3e-08 schizophrenia 2_109526659 rs9330316 ENSG00000186522.14 SEPTIN10 -87547 5.67e-07 -0.177673 5e-08 schizophrenia 2_109526659 rs9330316 ENSG00000186522.14 SEPTIN10 -87547 5.67e-07 -0.177673 5e-08 schizophrenia 2_129999731 rs13020137 ENSG00000214100.8 PLAC9P1 65414 1.24e-05 0.247743 5e-06 schizophrenia 2_129999731 rs13020137 ENSG00000225449.3 RAB6C-AS1 20068 3.18e-11 0.449065 5e-06 schizophrenia 2_129999731 rs13020137 ENSG00000222014.5 RAB6C 19264 6e-07 0.390401 5e-06 schizophrenia 2_129999731 rs13020137 ENSG00000180178.10 FAR2P1 -51400 9.14e-08 -0.375477 5e-06 schizophrenia 2_199851396 rs796364 ENSG00000226124.6 FTCDNL1 223 1.33e-05 0.460732 1e-14 schizophrenia 2_199851396 rs796364 ENSG00000226124.6 FTCDNL1 223 1.33e-05 0.460732 3e-13 schizophrenia 2_199851396 rs796364 ENSG00000226124.6 FTCDNL1 223 1.33e-05 0.460732 5e-14 schizophrenia 2_199851396 rs796364 ENSG00000226124.6 FTCDNL1 223 1.33e-05 0.460732 2e-16 schizophrenia 2_199851396 rs796364 ENSG00000226124.6 FTCDNL1 223 1.33e-05 0.460732 5e-10 schizophrenia 2_199871784 rs11693528 ENSG00000226124.6 FTCDNL1 20611 1.2e-05 -0.48807 3e-14 schizophrenia 2_199871784 rs11693528 ENSG00000226124.6 FTCDNL1 20611 1.2e-05 -0.48807 1e-12 schizophrenia 2_200296048 rs1367858 ENSG00000226124.6 FTCDNL1 444875 2.95e-05 -0.443669 3e-08 schizophrenia 2_200362139 rs2163548 ENSG00000226124.6 FTCDNL1 510966 2.48e-05 -0.584979 9e-11 schizophrenia 2_219180313 rs7577690 ENSG00000115649.15 CNPPD1 2391 6.17e-13 -0.429225 5e-08 schizophrenia 2_219196879 rs6707588 ENSG00000115649.15 CNPPD1 18957 1.26e-08 0.327811 9e-07 schizophrenia 2_232727791 rs6704768 ENSG00000182600.9 SNORC -141223 1.98e-06 -0.351689 1e-14 schizophrenia 2_232727791 rs6704768 ENSG00000182600.9 SNORC -141223 1.98e-06 -0.351689 2e-08 schizophrenia 2_232727791 rs6704768 ENSG00000182600.9 SNORC -141223 1.98e-06 -0.351689 2e-12 schizophrenia 2_232727791 rs6704768 ENSG00000182600.9 SNORC -141223 1.98e-06 -0.351689 6e-10 schizophrenia 2_232727791 rs6704768 ENSG00000182600.9 SNORC -141223 1.98e-06 -0.351689 3e-10 schizophrenia 2_232727791 rs6704768 ENSG00000182600.9 SNORC -141223 1.98e-06 -0.351689 3e-17 schizophrenia 2_232871534 rs2675968 ENSG00000182600.9 SNORC 2520 6.84e-07 0.405518 5e-06 schizophrenia 2_232878399 rs778371 ENSG00000182600.9 SNORC 9385 3.32e-07 0.424205 2e-13 schizophrenia 2_232878399 rs778371 ENSG00000182600.9 SNORC 9385 3.32e-07 0.424205 3e-15 schizophrenia 2_232878399 rs778371 ENSG00000182600.9 SNORC 9385 3.32e-07 0.424205 2e-12 schizophrenia 2_232878399 rs778371 ENSG00000182600.9 SNORC 9385 3.32e-07 0.424205 8e-12 schizophrenia 2_232878399 rs778371 ENSG00000182600.9 SNORC 9385 3.32e-07 0.424205 5e-12 schizophrenia 2_232878399 rs778371 ENSG00000182600.9 SNORC 9385 3.32e-07 0.424205 2e-13 schizophrenia 2_232878399 rs778371 ENSG00000182600.9 SNORC 9385 3.32e-07 0.424205 2e-08 schizophrenia 2_37323760 rs7584565 ENSG00000115816.14 CEBPZ 92130 4.71e-06 -0.265108 9e-09 schizophrenia 2_37334786 rs2372993 ENSG00000115816.14 CEBPZ 103156 8.09e-06 -0.262328 5e-07 schizophrenia 2_37334786 rs2372993 ENSG00000115816.14 CEBPZ 103156 8.09e-06 -0.262328 7e-07 schizophrenia 2_47993197 rs17396122 ENSG00000170802.15 FOXN2 -321440 1.05e-14 0.370548 1e-06 schizophrenia 2_48153579 rs12475492 ENSG00000170802.15 FOXN2 -161058 1.39e-15 0.370245 6e-09 schizophrenia 2_68196086 rs12052801 ENSG00000243667.6 DNAAF10 38526 2.13e-05 -0.26584 9e-07 schizophrenia 2_68196086 rs12052801 ENSG00000243667.6 DNAAF10 38526 2.13e-05 -0.26584 6e-06 schizophrenia 20_46052214 rs12624433 ENSG00000124140.13 SLC12A5 29371 2.83e-08 0.167282 5e-10 schizophrenia 21_20741130 rs34328150 ENSG00000224924.6 LINC00320 -62086 6.33e-13 -0.312871 4e-08 schizophrenia 21_37221319 rs13864 ENSG00000182670.13 TTC3 148093 2.59e-05 0.171034 8e-06 schizophrenia 22_42141587 rs1800754 ENSG00000100197.20 CYP2D6 10681 2.97e-23 0.750807 2e-15 schizophrenia 22_42141587 rs1800754 ENSG00000198951.11 NAGA 70745 1.45e-05 -0.206209 2e-15 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 2.77e-11 -0.560845 1e-11 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 2.77e-11 -0.560845 3e-08 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 2.77e-11 -0.560845 5e-09 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 2.77e-11 -0.560845 1e-10 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 2.77e-11 -0.560845 1e-08 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 1.39e-10 -0.528411 2e-09 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 1.39e-10 -0.528411 1e-08 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 1.39e-10 -0.528411 6e-10 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 1.39e-10 -0.528411 1e-09 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 1.39e-10 -0.528411 2e-09 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 1.39e-10 -0.528411 2e-14 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 1.39e-10 -0.528411 5e-10 schizophrenia 22_43039662 rs2072883 ENSG00000100271.16 TTLL1 -49766 3.74e-06 -0.213445 6e-06 schizophrenia 22_49824963 rs138880 ENSG00000182858.13 ALG12 -93495 2.79e-06 0.298642 2e-07 schizophrenia 22_49877528 rs5769765 ENSG00000184164.14 CRELD2 -40639 2.01e-06 -0.357111 2e-07 schizophrenia 22_49877528 rs5769765 ENSG00000182858.13 ALG12 -40930 4.61e-07 -0.323217 2e-07 schizophrenia 3_126800994 rs74405815 ENSG00000159685.10 CHCHD6 96774 6.65e-06 -0.265766 3e-06 schizophrenia 3_136095167 rs1278493 ENSG00000261758.1 STAG1-DT -657463 4.98e-15 -0.616585 1e-08 schizophrenia 3_136195634 rs9845457 ENSG00000261758.1 STAG1-DT -556996 3.8e-08 0.422476 2e-08 schizophrenia 3_136418580 rs10935182 ENSG00000261758.1 STAG1-DT -334050 2.65e-14 0.600625 7e-10 schizophrenia 3_136435986 rs66691851 ENSG00000114054.13 PCCB 185680 5.08e-05 0.193865 2e-13 schizophrenia 3_136435986 rs66691851 ENSG00000261758.1 STAG1-DT -316644 4.69e-16 0.619365 2e-13 schizophrenia 3_136435986 rs66691851 ENSG00000114054.13 PCCB 185680 5.08e-05 0.193865 4e-18 schizophrenia 3_136435986 rs66691851 ENSG00000261758.1 STAG1-DT -316644 4.69e-16 0.619365 4e-18 schizophrenia 3_136435986 rs66691851 ENSG00000114054.13 PCCB 185680 5.08e-05 0.193865 4e-15 schizophrenia 3_136435986 rs66691851 ENSG00000261758.1 STAG1-DT -316644 4.69e-16 0.619365 4e-15 schizophrenia 3_136435986 rs66691851 ENSG00000114054.13 PCCB 185680 5.08e-05 0.193865 2e-10 schizophrenia 3_136435986 rs66691851 ENSG00000261758.1 STAG1-DT -316644 4.69e-16 0.619365 2e-10 schizophrenia 3_136435986 rs66691851 ENSG00000114054.13 PCCB 185680 5.08e-05 0.193865 2e-11 schizophrenia 3_136435986 rs66691851 ENSG00000261758.1 STAG1-DT -316644 4.69e-16 0.619365 2e-11 schizophrenia 3_136555593 rs7427564 ENSG00000261758.1 STAG1-DT -197037 2.12e-15 0.612494 2e-11 schizophrenia 3_136555593 rs7427564 ENSG00000114054.13 PCCB 305287 5.93e-05 0.193473 2e-11 schizophrenia 3_136555593 rs7427564 ENSG00000261758.1 STAG1-DT -197037 2.12e-15 0.612494 2e-10 schizophrenia 3_136555593 rs7427564 ENSG00000114054.13 PCCB 305287 5.93e-05 0.193473 2e-10 schizophrenia 3_136569563 rs7432375 ENSG00000261758.1 STAG1-DT -183067 2.49e-16 0.631925 4e-12 schizophrenia 3_136569563 rs7432375 ENSG00000261758.1 STAG1-DT -183067 2.49e-16 0.631925 7e-11 schizophrenia 3_136569563 rs7432375 ENSG00000261758.1 STAG1-DT -183067 2.49e-16 0.631925 3e-08 schizophrenia 3_136569563 rs7432375 ENSG00000261758.1 STAG1-DT -183067 2.49e-16 0.631925 6e-10 schizophrenia 3_136571687 rs10935185 ENSG00000261758.1 STAG1-DT -180943 1.17e-15 0.618899 5e-09 schizophrenia 3_136590868 rs940174 ENSG00000261758.1 STAG1-DT -161762 2.49e-16 0.631925 3e-09 schizophrenia 3_136590868 rs940174 ENSG00000261758.1 STAG1-DT -161762 2.49e-16 0.631925 5e-10 schizophrenia 3_136681578 rs7618871 ENSG00000261758.1 STAG1-DT -71052 2.49e-16 -0.631925 1e-08 schizophrenia 3_137015172 rs1682361 ENSG00000261758.1 STAG1-DT 262542 4.02e-05 0.337744 8e-07 schizophrenia 3_47860313 rs7429990 ENSG00000164048.13 ZNF589 -380787 7.62e-05 0.42402 3e-09 schizophrenia 3_50002761 rs4688756 ENSG00000004534.14 RBM6 62754 1.05e-12 -0.295193 2e-17 schizophrenia 3_50002761 rs4688756 ENSG00000173540.12 GMPPB 278810 1.37e-05 0.365815 2e-17 schizophrenia 3_50467964 rs2236989 ENSG00000186792.16 HYAL3 168496 1.18e-05 0.243625 9e-09 schizophrenia 3_52234850 rs353547 ENSG00000168237.17 GLYCTK -52239 7.44e-07 0.389658 4e-08 schizophrenia 3_52234850 rs353547 ENSG00000055955.15 ITIH4 -595889 5.85e-05 -0.326268 4e-08 schizophrenia 3_52234850 rs353547 ENSG00000164088.17 PPM1M -10943 7.19e-06 0.22672 4e-08 schizophrenia 3_52253452 rs11717383 ENSG00000168237.17 GLYCTK -33637 2.46e-09 -0.462573 3e-09 schizophrenia 3_52804386 rs4687552 ENSG00000055955.15 ITIH4 -26353 1.62e-06 0.407508 1e-08 schizophrenia 3_52821213 rs2239547 ENSG00000242142.1 SERBP1P3 -243878 1.24e-05 0.557264 6e-08 schizophrenia 3_52821213 rs2239547 ENSG00000055955.15 ITIH4 -9526 1.86e-10 0.574667 6e-08 schizophrenia 3_53002190 rs2581794 ENSG00000242142.1 SERBP1P3 -62901 1.02e-08 0.551266 3e-07 schizophrenia 3_53108964 rs2115780 ENSG00000242142.1 SERBP1P3 43873 1.76e-09 0.681183 4e-08 schizophrenia 3_63847374 rs832187 ENSG00000163634.11 THOC7 -16529 3.79e-10 0.229491 1e-08 schizophrenia 3_63847374 rs832187 ENSG00000163634.11 THOC7 -16529 3.79e-10 0.229491 5e-09 schizophrenia 3_63847374 rs832187 ENSG00000163634.11 THOC7 -16529 3.79e-10 0.229491 1e-08 schizophrenia 3_63847374 rs832187 ENSG00000163634.11 THOC7 -16529 3.79e-10 0.229491 2e-08 schizophrenia 3_63856953 rs832190 ENSG00000163634.11 THOC7 -6950 3.47e-12 0.249402 5e-09 schizophrenia 3_63856953 rs832190 ENSG00000163634.11 THOC7 -6950 3.47e-12 0.249402 6e-10 schizophrenia 3_63856953 rs832190 ENSG00000163634.11 THOC7 -6950 3.47e-12 0.249402 4e-08 schizophrenia 3_63856953 rs832190 ENSG00000163634.11 THOC7 -6950 3.47e-12 0.249402 3e-08 schizophrenia 3_63856953 rs832190 ENSG00000163634.11 THOC7 -6950 3.47e-12 0.249402 4e-08 schizophrenia 3_63856953 rs832190 ENSG00000163634.11 THOC7 -6950 3.47e-12 0.249402 4e-09 schizophrenia 3_63856953 rs832190 ENSG00000163634.11 THOC7 -6950 3.47e-12 0.249402 3e-09 schizophrenia 3_63881679 rs704373 ENSG00000163634.11 THOC7 17776 1.26e-07 0.197302 1e-10 schizophrenia 4_103053903 rs7688014 ENSG00000164039.14 BDH2 -45980 1.32e-06 0.26159 3e-06 schizophrenia 4_175804069 rs7673823 ENSG00000249106.1 GPM6A-DT 13762 1.18e-07 -0.769725 5e-09 schizophrenia 4_175810250 rs12498839 ENSG00000249106.1 GPM6A-DT 19943 8.34e-10 -0.999845 2e-06 schizophrenia 4_178095326 rs71615297 ENSG00000251504.1 LINC01099 187390 1.55e-05 -0.445137 2e-08 schizophrenia 4_181175265 rs55961658 ENSG00000248197.1 LINC00290 16116 1.24e-05 0.394514 8e-06 schizophrenia 4_181175265 rs55961658 ENSG00000248197.1 LINC00290 16116 1.24e-05 0.394514 8e-06 schizophrenia 5_140737079 rs2531360 ENSG00000146007.10 ZMAT2 36745 1.48e-05 0.167258 2e-10 schizophrenia 5_140737079 rs2531360 ENSG00000213523.10 SRA1 178827 8.86e-06 -0.199793 2e-10 schizophrenia 5_140759116 rs7445192 ENSG00000213523.10 SRA1 200864 1.37e-05 -0.193333 5e-07 schizophrenia 5_140767314 rs13168670 ENSG00000213523.10 SRA1 209062 1.57e-05 0.188591 6e-08 schizophrenia 5_140767314 rs13168670 ENSG00000213523.10 SRA1 209062 1.57e-05 0.188591 4e-07 schizophrenia 5_140774630 rs7733403 ENSG00000213523.10 SRA1 216378 1.57e-05 0.188591 1e-08 schizophrenia 5_140774630 rs7733403 ENSG00000213523.10 SRA1 216378 1.57e-05 0.188591 9e-11 schizophrenia 5_140774630 rs7733403 ENSG00000213523.10 SRA1 216378 1.57e-05 0.188591 2e-08 schizophrenia 5_45285650 rs16902086 ENSG00000249203.1 LINC02224 775368 6.07e-06 -0.447784 6e-11 schizophrenia 5_88334952 rs247910 ENSG00000247828.7 TMEM161B-DT 65881 7.15e-07 0.339209 3e-09 schizophrenia 6_25874195 rs13198474 ENSG00000186470.13 BTN3A2 -490964 7.82e-07 -1.0072 3e-20 schizophrenia 6_25885586 rs629444 ENSG00000186470.13 BTN3A2 -479573 3.95e-05 -0.5398 2e-13 schizophrenia 6_26173250 rs34661691 ENSG00000186470.13 BTN3A2 -191909 4.77e-05 -0.507091 6e-22 schizophrenia 6_26196365 rs67575965 ENSG00000274750.2 H3C6 -27834 5.9e-10 0.66827 2e-09 schizophrenia 6_26196365 rs67575965 ENSG00000186470.13 BTN3A2 -168794 3.91e-05 -0.409415 2e-09 schizophrenia 6_26196365 rs67575965 ENSG00000274750.2 H3C6 -27834 5.9e-10 0.66827 2e-09 schizophrenia 6_26196365 rs67575965 ENSG00000186470.13 BTN3A2 -168794 3.91e-05 -0.409415 2e-09 schizophrenia 6_26408323 rs75782365 ENSG00000186470.13 BTN3A2 43164 3.15e-10 -1.0549 2e-27 schizophrenia 6_26408323 rs75782365 ENSG00000186470.13 BTN3A2 43164 3.15e-10 -1.0549 3e-25 schizophrenia 6_26408323 rs75782365 ENSG00000186470.13 BTN3A2 43164 3.15e-10 -1.0549 8e-24 schizophrenia 6_26409662 rs41266839 ENSG00000186470.13 BTN3A2 44503 3.15e-10 -1.0549 7e-27 schizophrenia 6_26466161 rs1977199 ENSG00000186470.13 BTN3A2 101002 1.61e-07 0.531712 1e-08 schizophrenia 6_26478024 rs34104395 ENSG00000186470.13 BTN3A2 112865 6.48e-13 -1.05851 9e-20 schizophrenia 6_26955320 rs9348739 ENSG00000186470.13 BTN3A2 590161 3.75e-07 -0.570917 5e-17 schizophrenia 6_27039908 rs35741362 ENSG00000186470.13 BTN3A2 674749 1.9e-06 -0.61377 2e-18 schizophrenia 6_27332531 rs13212562 ENSG00000186470.13 BTN3A2 967372 4.15e-07 -0.642479 3e-16 schizophrenia 6_27654305 rs141342723 ENSG00000219392.1 ZNF602P -461323 0.000116609 -0.451818 4e-24 schizophrenia 6_27837477 rs34706883 ENSG00000219392.1 ZNF602P -278151 5.09e-05 -0.485866 2e-26 schizophrenia 6_27837477 rs34706883 ENSG00000219392.1 ZNF602P -278151 5.09e-05 -0.485866 5e-27 schizophrenia 6_27856988 rs200986 ENSG00000219392.1 ZNF602P -258640 1.49e-08 -0.379073 2e-11 schizophrenia 6_27856988 rs200986 ENSG00000216901.1 ZNF603P -319200 1.58e-10 0.74601 2e-11 schizophrenia 6_27856988 rs200986 ENSG00000235109.7 ZSCAN31 -499283 9.53e-10 0.644085 2e-11 schizophrenia 6_27856988 rs200986 ENSG00000197062.11 ZSCAN26 -410022 4.05e-05 -0.313628 2e-11 schizophrenia 6_27856988 rs200986 ENSG00000198315.10 ZKSCAN8 -284922 4.56e-06 -0.181772 2e-11 schizophrenia 6_28043874 rs202906 ENSG00000235109.7 ZSCAN31 -312397 6.22e-05 0.621799 3e-16 schizophrenia 6_28043874 rs202906 ENSG00000216901.1 ZNF603P -132314 1.52e-07 0.888644 3e-16 schizophrenia 6_28043874 rs202906 ENSG00000137185.11 ZSCAN9 -181012 9.22e-05 0.291464 3e-16 schizophrenia 6_28043874 rs202906 ENSG00000219392.1 ZNF602P -71754 6.85e-09 -0.547265 3e-16 schizophrenia 6_28195002 rs1150688 ENSG00000189298.13 ZKSCAN3 -154912 0.000136501 -0.300103 8e-11 schizophrenia 6_28195002 rs1150688 ENSG00000235109.7 ZSCAN31 -161269 3.32e-16 0.756152 8e-11 schizophrenia 6_28195002 rs1150688 ENSG00000197062.11 ZSCAN26 -72008 1.42e-07 -0.365893 8e-11 schizophrenia 6_28195002 rs1150688 ENSG00000216901.1 ZNF603P 18814 6.66e-31 1.06249 8e-11 schizophrenia 6_28230108 rs34787248 ENSG00000189298.13 ZKSCAN3 -119806 4.87e-06 -0.44055 2e-11 schizophrenia 6_28230108 rs34787248 ENSG00000235109.7 ZSCAN31 -126163 9.34e-09 0.703005 2e-11 schizophrenia 6_28230108 rs34787248 ENSG00000219392.1 ZNF602P 114480 3.97e-06 -0.363524 2e-11 schizophrenia 6_28230108 rs34787248 ENSG00000198315.10 ZKSCAN8 88198 2.81e-05 -0.192768 2e-11 schizophrenia 6_28230108 rs34787248 ENSG00000216901.1 ZNF603P 53920 2.04e-10 0.855613 2e-11 schizophrenia 6_28230108 rs34787248 ENSG00000197062.11 ZSCAN26 -36902 2.12e-05 -0.37362 2e-11 schizophrenia 6_28246920 rs17720293 ENSG00000235109.7 ZSCAN31 -109351 5.9e-05 0.709825 3e-23 schizophrenia 6_28246920 rs17720293 ENSG00000137185.11 ZSCAN9 22034 0.000154564 0.321663 3e-23 schizophrenia 6_28246920 rs17720293 ENSG00000219392.1 ZNF602P 131292 1.22e-06 -0.531903 3e-23 schizophrenia 6_28246920 rs17720293 ENSG00000216901.1 ZNF603P 70732 2.52e-05 0.82746 3e-23 schizophrenia 6_28246920 rs17720293 ENSG00000198315.10 ZKSCAN8 105010 2.58e-05 -0.270495 3e-23 schizophrenia 6_28301047 rs33932084 ENSG00000137185.11 ZSCAN9 76161 0.000139651 0.34952 3e-28 schizophrenia 6_28301047 rs33932084 ENSG00000137185.11 ZSCAN9 76161 0.000139651 0.34952 3e-29 schizophrenia 6_28338894 rs13217619 ENSG00000219392.1 ZNF602P 223266 7.97e-05 -0.486167 1e-27 schizophrenia 6_28338894 rs13217619 ENSG00000137185.11 ZSCAN9 114008 0.000115841 0.362327 1e-27 schizophrenia 6_28338894 rs13217619 ENSG00000219392.1 ZNF602P 223266 7.97e-05 -0.486167 2e-29 schizophrenia 6_28338894 rs13217619 ENSG00000137185.11 ZSCAN9 114008 0.000115841 0.362327 2e-29 schizophrenia 6_28357424 rs6921919 ENSG00000216901.1 ZNF603P 181236 8.98e-07 0.673945 1e-19 schizophrenia 6_28387058 rs67981811 ENSG00000137185.11 ZSCAN9 162172 0.000115841 0.362327 5e-19 schizophrenia 6_28387058 rs67981811 ENSG00000219392.1 ZNF602P 271430 7.97e-05 -0.486167 5e-19 schizophrenia 6_28432761 rs7766356 ENSG00000216901.1 ZNF603P 256573 7.87e-07 0.752142 3e-21 schizophrenia 6_28447190 rs16894116 ENSG00000216901.1 ZNF603P 271002 5.1e-07 0.691604 3e-21 schizophrenia 6_28594812 rs115031589 ENSG00000216901.1 ZNF603P 418624 2.59e-09 0.813614 3e-20 schizophrenia 6_28594812 rs115031589 ENSG00000235109.7 ZSCAN31 238541 7.35e-06 0.565879 3e-20 schizophrenia 6_28610509 rs116663187 ENSG00000235109.7 ZSCAN31 254238 1.27e-05 0.523616 2e-15 schizophrenia 6_28610509 rs116663187 ENSG00000216901.1 ZNF603P 434321 1.11e-08 0.743988 2e-15 schizophrenia 6_28691630 rs144911693 ENSG00000197062.11 ZSCAN26 424620 4.19e-05 -0.308856 5e-14 schizophrenia 6_28691630 rs144911693 ENSG00000216901.1 ZNF603P 515442 1.43e-05 0.520996 5e-14 schizophrenia 6_29150075 rs144649399 ENSG00000216901.1 ZNF603P 973887 0.000104855 0.589615 1e-12 schizophrenia 6_29638984 rs138488080 ENSG00000230795.3 HLA-K -288194 2.84e-07 -0.840655 3e-16 schizophrenia 6_29639270 rs114041423 ENSG00000281831.1 HCP5B -234513 3.93e-05 0.546923 1e-15 schizophrenia 6_29639270 rs114041423 ENSG00000230795.3 HLA-K -287908 1.41e-09 -0.831638 1e-15 schizophrenia 6_29642504 rs115374247 ENSG00000235821.1 IFITM4P -108644 2.52e-06 -0.481315 2e-13 schizophrenia 6_29642504 rs115374247 ENSG00000235821.1 IFITM4P -108644 2.52e-06 -0.481315 2e-13 schizophrenia 6_29660317 rs143363269 ENSG00000281831.1 HCP5B -213466 6.03e-05 0.539433 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000230795.3 HLA-K -266861 2.9e-09 -0.82527 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000281831.1 HCP5B -213466 6.03e-05 0.539433 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000230795.3 HLA-K -266861 2.9e-09 -0.82527 1e-10 schizophrenia 6_29681770 rs385492 ENSG00000176998.4 HCG4 -110666 1.6e-06 -0.508958 1e-08 schizophrenia 6_29681770 rs385492 ENSG00000235821.1 IFITM4P -69378 6.11e-06 -0.465892 1e-08 schizophrenia 6_29681770 rs385492 ENSG00000176998.4 HCG4 -110666 1.6e-06 -0.508958 4e-09 schizophrenia 6_29681770 rs385492 ENSG00000235821.1 IFITM4P -69378 6.11e-06 -0.465892 4e-09 schizophrenia 6_29696112 rs3131888 ENSG00000273340.1 MICE -49122 4.44e-05 -0.375731 7e-06 schizophrenia 6_29696112 rs3131888 ENSG00000230795.3 HLA-K -231066 2.15e-06 -0.522774 7e-06 schizophrenia 6_29696112 rs3131888 ENSG00000235821.1 IFITM4P -55036 2.99e-05 -0.417039 7e-06 schizophrenia 6_29783215 rs144018888 ENSG00000176998.4 HCG4 -9221 3.21e-11 -0.658765 3e-12 schizophrenia 6_29783228 rs144373461 ENSG00000176998.4 HCG4 -9208 5.61e-10 -0.6473 6e-16 schizophrenia 6_29783228 rs144373461 ENSG00000176998.4 HCG4 -9208 5.61e-10 -0.6473 1e-17 schizophrenia 6_29783228 rs144373461 ENSG00000176998.4 HCG4 -9208 5.61e-10 -0.6473 2e-17 schizophrenia 6_29783976 rs142425863 ENSG00000176998.4 HCG4 -8460 2.03e-13 -0.735134 5e-11 schizophrenia 6_29842049 rs116326873 ENSG00000176998.4 HCG4 49613 1.5e-07 -0.607665 2e-17 schizophrenia 6_29882943 rs151267808 ENSG00000137312.14 FLOT1 -859790 1.57e-05 0.304865 1e-22 schizophrenia 6_29972902 rs114204022 ENSG00000230795.3 HLA-K 45724 6.68e-15 -0.802519 5e-11 schizophrenia 6_29972902 rs114204022 ENSG00000206341.7 HLA-H 84435 8.47e-06 0.432704 5e-11 schizophrenia 6_29983056 rs114950038 ENSG00000235821.1 IFITM4P 231908 2.56e-06 -0.470245 2e-12 schizophrenia 6_29983056 rs114950038 ENSG00000204623.9 ZNRD1ASP -78197 7.1e-10 -0.359556 2e-12 schizophrenia 6_30064745 rs8321 ENSG00000137312.14 FLOT1 -677988 1.57e-05 0.304865 8e-09 schizophrenia 6_30197496 rs2523722 ENSG00000270604.5 HCG17 -56968 1.55e-05 -0.489495 1e-16 schizophrenia 6_30202733 rs116408368 ENSG00000270604.5 HCG17 -51731 1.74e-05 -0.468026 7e-17 schizophrenia 6_30202733 rs116408368 ENSG00000270604.5 HCG17 -51731 1.74e-05 -0.468026 1e-21 schizophrenia 6_30206354 rs2021722 ENSG00000270604.5 HCG17 -48110 1.74e-05 -0.468026 2e-12 schizophrenia 6_30206354 rs2021722 ENSG00000270604.5 HCG17 -48110 1.74e-05 -0.468026 2e-12 schizophrenia 6_30368886 rs114200269 ENSG00000137312.14 FLOT1 -373847 1.61e-05 0.303319 2e-19 schizophrenia 6_30397852 rs115687605 ENSG00000137312.14 FLOT1 -344881 5.41e-06 0.25564 2e-15 schizophrenia 6_30397852 rs115687605 ENSG00000137312.14 FLOT1 -344881 5.41e-06 0.25564 3e-13 schizophrenia 6_30639723 rs149915948 ENSG00000230795.3 HLA-K 712545 1.2e-06 -0.618255 7e-11 schizophrenia 6_30762562 rs150430679 ENSG00000228022.5 HCG20 -4263 6.69e-06 -0.633211 3e-13 schizophrenia 6_30905731 rs111782145 ENSG00000228789.6 HCG22 -147719 4.43e-05 0.766954 2e-08 schizophrenia 6_30905731 rs111782145 ENSG00000137411.16 VARS2 -8474 2.23e-05 -0.736594 2e-08 schizophrenia 6_30931418 rs114115252 ENSG00000137411.16 VARS2 17213 2.14e-05 -0.467079 8e-20 schizophrenia 6_30937536 rs114838832 ENSG00000137411.16 VARS2 23331 4.9e-08 -0.425244 2e-10 schizophrenia 6_30945681 rs3132581 ENSG00000137411.16 VARS2 31476 2.14e-05 -0.467079 2e-07 schizophrenia 6_31005088 rs116502302 ENSG00000244731.7 C4A -976936 7.61e-06 -0.343084 5e-09 schizophrenia 6_31086734 rs115136442 ENSG00000204531.17 POU5F1 -93997 2.4e-08 0.571798 2e-08 schizophrenia 6_31111032 rs3132556 ENSG00000204540.10 PSORS1C1 -3718 2.39e-05 -0.583472 1e-09 schizophrenia 6_31111032 rs3132556 ENSG00000244731.7 C4A -870992 1.69e-06 -0.438496 1e-09 schizophrenia 6_31137370 rs149979052 ENSG00000204540.10 PSORS1C1 22620 7.53e-06 -0.793084 7e-19 schizophrenia 6_31137370 rs149979052 ENSG00000244731.7 C4A -844654 3.01e-06 -0.55215 7e-19 schizophrenia 6_31137370 rs149979052 ENSG00000204540.10 PSORS1C1 22620 7.53e-06 -0.793084 7e-14 schizophrenia 6_31137370 rs149979052 ENSG00000244731.7 C4A -844654 3.01e-06 -0.55215 7e-14 schizophrenia 6_31137636 rs1265099 ENSG00000206344.7 HCG27 -60502 4.42e-05 0.33587 2e-10 schizophrenia 6_31245806 rs114142645 ENSG00000204531.17 POU5F1 65075 2.1e-06 0.526753 2e-08 schizophrenia 6_31268274 rs111977918 ENSG00000204525.16 HLA-C -3831 1.63e-13 -0.519668 2e-08 schizophrenia 6_31300843 rs114274203 ENSG00000206344.7 HCG27 102705 2.58e-08 0.41616 3e-12 schizophrenia 6_31300843 rs114274203 ENSG00000204525.16 HLA-C 28738 1.86e-10 -0.438701 3e-12 schizophrenia 6_31345252 rs116509918 ENSG00000204540.10 PSORS1C1 230502 1.34e-05 -0.774617 6e-20 schizophrenia 6_31345252 rs116509918 ENSG00000244731.7 C4A -636772 1.31e-06 -0.571665 6e-20 schizophrenia 6_31352146 rs36057735 ENSG00000244731.7 C4A -629878 2.76e-05 -0.396089 2e-12 schizophrenia 6_31353490 rs2596500 ENSG00000244731.7 C4A -628534 1.63e-07 -0.62556 8e-20 schizophrenia 6_31353490 rs2596500 ENSG00000204338.8 CYP21A1P -652199 4.87e-05 -0.719634 8e-20 schizophrenia 6_31353490 rs2596500 ENSG00000204540.10 PSORS1C1 238740 2.02e-06 -0.855232 8e-20 schizophrenia 6_31380300 rs114904464 ENSG00000204540.10 PSORS1C1 265550 3.26e-05 -0.70496 3e-15 schizophrenia 6_31380300 rs114904464 ENSG00000244731.7 C4A -601724 2.12e-06 -0.533487 3e-15 schizophrenia 6_31383745 rs114291394 ENSG00000204525.16 HLA-C 111640 4.89e-08 -0.437052 2e-10 schizophrenia 6_31481775 rs140502984 ENSG00000204338.8 CYP21A1P -523914 3.47e-05 -0.677176 5e-15 schizophrenia 6_31481775 rs140502984 ENSG00000244731.7 C4A -500249 6e-08 -0.59597 5e-15 schizophrenia 6_31635190 rs1046089 ENSG00000204338.8 CYP21A1P -370499 1.75e-05 -0.448128 4e-06 schizophrenia 6_31635190 rs1046089 ENSG00000204428.12 LY6G5C -48850 3.99e-05 -0.403519 4e-06 schizophrenia 6_31635190 rs1046089 ENSG00000244731.7 C4A -346834 4.37e-05 -0.294702 4e-06 schizophrenia 6_31758911 rs707939 ENSG00000204463.12 BAG6 106206 2.64e-08 0.378344 4e-12 schizophrenia 6_31758911 rs707939 ENSG00000213676.10 ATF6B -369342 6.11e-07 0.325167 4e-12 schizophrenia 6_31819390 rs142536810 ENSG00000244731.7 C4A -162634 1.41e-10 -0.773458 5e-20 schizophrenia 6_31819390 rs142536810 ENSG00000204338.8 CYP21A1P -186299 8.94e-07 -0.888884 5e-20 schizophrenia 6_31858928 rs67682613 ENSG00000204338.8 CYP21A1P -146761 1.17e-05 -0.659549 7e-19 schizophrenia 6_31858928 rs67682613 ENSG00000244731.7 C4A -123096 2.95e-07 -0.524023 7e-19 schizophrenia 6_31894038 rs142520578 ENSG00000240053.8 LY6G5B 223871 4.57e-05 -0.202101 5e-10 schizophrenia 6_31913532 rs116385615 ENSG00000204338.8 CYP21A1P -92157 4.5e-06 -0.693816 2e-16 schizophrenia 6_31913532 rs116385615 ENSG00000244731.7 C4A -68492 1.3e-06 -0.501778 2e-16 schizophrenia 6_31940060 rs2293751 ENSG00000231852.6 CYP21A2 -98205 1.22e-06 0.44453 3e-08 schizophrenia 6_31977869 rs2734325 ENSG00000213676.10 ATF6B -150384 3.8e-08 0.351418 3e-07 schizophrenia 6_31977869 rs2734325 ENSG00000204338.8 CYP21A1P -27820 1.19e-07 0.555169 3e-07 schizophrenia 6_31979683 rs389883 ENSG00000198502.5 HLA-DRB5 -550604 1.03e-05 -0.445719 1e-12 schizophrenia 6_31979683 rs389883 ENSG00000196126.11 HLA-DRB1 -610165 4.9e-05 -0.226904 1e-12 schizophrenia 6_32058086 rs369637 ENSG00000244731.7 C4A 76062 3.21e-06 -0.509369 2e-10 schizophrenia 6_32082981 rs1150754 ENSG00000244731.7 C4A 100957 3.21e-06 -0.509369 3e-12 schizophrenia 6_32147408 rs145076523 ENSG00000244731.7 C4A 165384 1.81e-06 -0.414158 5e-13 schizophrenia 6_32197667 rs115344853 ENSG00000244731.7 C4A 215643 1.99e-05 -0.445926 4e-14 schizophrenia 6_32197667 rs115344853 ENSG00000244731.7 C4A 215643 1.99e-05 -0.445926 2e-17 schizophrenia 6_32203298 rs3132935 ENSG00000244731.7 C4A 221274 6.49e-05 -0.333503 3e-07 schizophrenia 6_32203298 rs3132935 ENSG00000244731.7 C4A 221274 6.49e-05 -0.333503 5e-07 schizophrenia 6_32205216 rs3131296 ENSG00000244731.7 C4A 223192 1.35e-07 -0.581687 2e-10 schizophrenia 6_32205216 rs3131296 ENSG00000204338.8 CYP21A1P 199527 8.98e-07 -0.792792 2e-10 schizophrenia 6_32223264 rs115963308 ENSG00000204301.6 NOTCH4 -803 7.11e-06 -0.250396 3e-08 schizophrenia 6_32228798 rs142601889 ENSG00000204301.6 NOTCH4 4731 6.4e-07 -0.261656 4e-11 schizophrenia 6_32238466 rs145547914 ENSG00000204338.8 CYP21A1P 232777 7.07e-08 -0.749322 3e-15 schizophrenia 6_32238466 rs145547914 ENSG00000244731.7 C4A 256442 2.43e-05 -0.413087 3e-15 schizophrenia 6_32317765 rs114473235 ENSG00000198502.5 HLA-DRB5 -212522 2.8e-05 -0.410419 8e-07 schizophrenia 6_32374760 rs114086406 ENSG00000244731.7 C4A 392736 8.53e-09 -0.455044 1e-12 schizophrenia 6_32381780 rs115035678 ENSG00000204338.8 CYP21A1P 376091 3.54e-06 -0.855291 1e-14 schizophrenia 6_32381780 rs115035678 ENSG00000244731.7 C4A 399756 1.15e-08 -0.709601 1e-14 schizophrenia 6_32390493 rs3117099 ENSG00000244731.7 C4A 408469 2.32e-08 -0.449947 3e-06 schizophrenia 6_32413695 rs116047537 ENSG00000198502.5 HLA-DRB5 -116592 3.81e-05 -0.394198 2e-09 schizophrenia 6_32413695 rs116047537 ENSG00000248290.1 TNXA 401223 5.56e-05 -0.443213 2e-09 schizophrenia 6_32464185 rs114002140 ENSG00000244731.7 C4A 482161 5.49e-06 -0.352989 9e-14 schizophrenia 6_32464869 rs115406947 ENSG00000244731.7 C4A 482845 9.43e-07 -0.518237 2e-18 schizophrenia 6_32466042 rs138984909 ENSG00000198502.5 HLA-DRB5 -64245 1.52e-05 -0.486118 4e-13 schizophrenia 6_32466042 rs138984909 ENSG00000244731.7 C4A 484018 5.79e-08 -0.444861 4e-13 schizophrenia 6_32469754 rs187696124 ENSG00000244731.7 C4A 487730 8.9e-06 -0.3436 7e-17 schizophrenia 6_32469754 rs187696124 ENSG00000198502.5 HLA-DRB5 -60533 3.95e-05 -0.429126 7e-17 schizophrenia 6_32470272 rs149998036 ENSG00000198502.5 HLA-DRB5 -60015 3.95e-05 -0.429126 3e-09 schizophrenia 6_32470272 rs149998036 ENSG00000244731.7 C4A 488248 8.9e-06 -0.3436 3e-09 schizophrenia 6_32534622 rs180778602 ENSG00000244731.7 C4A 552598 2.34e-08 -0.586972 4e-12 schizophrenia 6_32582137 rs142790902 ENSG00000244731.7 C4A 600113 4.36e-05 -0.483782 1e-11 schizophrenia 6_32584671 rs11753207 ENSG00000244731.7 C4A 602647 1.22e-07 -0.580566 3e-11 schizophrenia 6_32597688 rs2760981 ENSG00000198502.5 HLA-DRB5 67401 3.38e-12 -0.607199 4e-11 schizophrenia 6_32614112 rs4530903 ENSG00000232629.8 HLA-DQB2 -149422 2.22e-05 -0.741858 5e-06 schizophrenia 6_32634492 rs9272219 ENSG00000232629.8 HLA-DQB2 -129042 8.71e-07 0.494957 7e-08 schizophrenia 6_32634492 rs9272219 ENSG00000179344.16 HLA-DQB1 -33891 1.08e-06 -0.435599 7e-08 schizophrenia 6_32635879 rs116139966 ENSG00000179344.16 HLA-DQB1 -32504 3.34e-07 -0.445756 1e-09 schizophrenia 6_32635879 rs116139966 ENSG00000232629.8 HLA-DQB2 -127655 1.29e-06 0.479159 1e-09 schizophrenia 6_32668221 rs9274623 ENSG00000244731.7 C4A 686197 2.29e-05 -0.3724 6e-19 schizophrenia 6_32668221 rs9274623 ENSG00000204338.8 CYP21A1P 662532 2.23e-05 -0.541482 6e-19 schizophrenia 6_32668221 rs9274623 ENSG00000179344.16 HLA-DQB1 -162 3.37e-05 -0.450341 6e-19 schizophrenia 6_32668836 rs147875011 ENSG00000232629.8 HLA-DQB2 -94698 8.82e-10 0.582188 3e-10 schizophrenia 6_32668836 rs147875011 ENSG00000179344.16 HLA-DQB1 453 1.13e-12 -0.5848 3e-10 schizophrenia 6_32706552 rs114771361 ENSG00000229391.7 HLA-DRB6 146530 4.7e-06 0.426208 5e-10 schizophrenia 6_32706552 rs114771361 ENSG00000237541.3 HLA-DQA2 -34790 1.88e-08 0.538216 5e-10 schizophrenia 6_32706552 rs114771361 ENSG00000232629.8 HLA-DQB2 -56982 1.6e-11 0.598001 5e-10 schizophrenia 6_32707332 rs9275524 ENSG00000237541.3 HLA-DQA2 -34010 7.34e-09 0.562968 2e-07 schizophrenia 6_32707332 rs9275524 ENSG00000179344.16 HLA-DQB1 38949 7.96e-07 -0.412968 2e-07 schizophrenia 6_32707332 rs9275524 ENSG00000223534.1 HLA-DQB1-AS1 46977 9.57e-08 -0.48751 2e-07 schizophrenia 6_32707332 rs9275524 ENSG00000229391.7 HLA-DRB6 147310 5.09e-11 0.598103 2e-07 schizophrenia 6_32707332 rs9275524 ENSG00000232629.8 HLA-DQB2 -56202 4.77e-08 0.509443 2e-07 schizophrenia 6_32715035 rs114830752 ENSG00000204338.8 CYP21A1P 709346 3.5e-05 -0.608794 3e-08 schizophrenia 6_32715035 rs114830752 ENSG00000244731.7 C4A 733011 6.57e-05 -0.405305 3e-08 schizophrenia 6_32936262 rs115497191 ENSG00000204257.14 HLA-DMA -32832 2.41e-12 0.617638 4e-14 schizophrenia 6_32936262 rs115497191 ENSG00000204256.12 BRD2 -32398 3.34e-05 0.475789 4e-14 schizophrenia 6_32945469 rs1480380 ENSG00000204257.14 HLA-DMA -23625 4.75e-11 0.513998 6e-07 schizophrenia 6_32946949 rs73396800 ENSG00000204256.12 BRD2 -21711 1.14e-05 0.513432 4e-16 schizophrenia 6_32946949 rs73396800 ENSG00000204257.14 HLA-DMA -22145 8.64e-14 0.665184 4e-16 schizophrenia 6_32963018 rs115325719 ENSG00000204257.14 HLA-DMA -6076 5.14e-08 0.403619 6e-11 schizophrenia 6_32963018 rs115325719 ENSG00000204256.12 BRD2 -5642 3.17e-05 0.386584 6e-11 schizophrenia 6_33227606 rs114460660 ENSG00000204257.14 HLA-DMA 258512 1.65e-07 0.60435 3e-08 schizophrenia 6_33227606 rs114460660 ENSG00000204257.14 HLA-DMA 258512 1.65e-07 0.60435 3e-08 schizophrenia 6_33569769 rs169738 ENSG00000030110.12 BAK1 -10524 1.72e-06 -0.379352 4e-11 schizophrenia 6_33569769 rs169738 ENSG00000030110.12 BAK1 -10524 1.72e-06 -0.379352 8e-12 schizophrenia 6_33569769 rs169738 ENSG00000030110.12 BAK1 -10524 1.72e-06 -0.379352 8e-10 schizophrenia 6_56710873 rs17684571 ENSG00000231441.1 DST-AS1 -133129 4.31e-05 0.503989 4e-06 schizophrenia 6_87144623 rs9362395 ENSG00000203872.6 C6orf163 -200226 1.6e-06 -0.889205 7e-07 schizophrenia 7_100699412 rs221780 ENSG00000146830.9 GIGYF1 9964 1.95e-06 -0.281365 3e-07 schizophrenia 7_100699412 rs221780 ENSG00000146830.9 GIGYF1 9964 1.95e-06 -0.281365 3e-06 schizophrenia 7_100699412 rs221780 ENSG00000146830.9 GIGYF1 9964 1.95e-06 -0.281365 1e-07 schizophrenia 7_100715476 rs492430 ENSG00000146830.9 GIGYF1 26028 9.07e-06 -0.260485 2e-08 schizophrenia 7_100717894 rs1734907 ENSG00000146830.9 GIGYF1 28446 1.33e-05 -0.257454 4e-06 schizophrenia 7_2189213 rs1637749 ENSG00000122687.17 MRM2 -52985 8.15e-06 0.29775 3e-10 schizophrenia 7_2238591 rs7799006 ENSG00000122687.17 MRM2 -3607 1.33e-15 0.45757 5e-06 schizophrenia 7_23871880 rs2106747 ENSG00000188732.10 FAM221A 191750 1.65e-07 -0.448714 3e-08 schizophrenia 7_23876057 rs10262624 ENSG00000188732.10 FAM221A 195927 1.65e-07 -0.448714 2e-06 schizophrenia 7_24614159 rs2390982 ENSG00000105928.13 GSDME -143954 7.45e-06 0.521879 4e-11 schizophrenia 7_24652933 rs2721800 ENSG00000105928.13 GSDME -105180 3e-06 0.449047 6e-07 schizophrenia 7_24695385 rs112509803 ENSG00000105928.13 GSDME -62728 7.45e-06 0.521879 5e-08 schizophrenia 7_24695385 rs112509803 ENSG00000105928.13 GSDME -62728 7.45e-06 0.521879 1e-07 schizophrenia 7_24695385 rs112509803 ENSG00000105928.13 GSDME -62728 7.45e-06 0.521879 3e-07 schizophrenia 7_24695385 rs112509803 ENSG00000105928.13 GSDME -62728 7.45e-06 0.521879 7e-07 schizophrenia 7_24746263 rs12154597 ENSG00000105928.13 GSDME -11850 6.96e-06 0.475658 7e-07 schizophrenia 7_24786970 rs79879286 ENSG00000105928.13 GSDME 28857 8.9e-06 0.436191 7e-11 schizophrenia 7_76335026 rs2961033 ENSG00000146707.14 POMZP3 -290657 1.54e-07 -0.698346 5e-07 schizophrenia 8_10368845 rs3088186 ENSG00000255020.1 TDH-AS1 -978657 2.67e-05 0.360148 4e-09 schizophrenia 8_10388815 rs12543645 ENSG00000253641.5 LINC03022 -85750 1.98e-05 0.426489 4e-07 schizophrenia 8_10388815 rs12543645 ENSG00000255020.1 TDH-AS1 -958687 1.39e-05 0.379956 4e-07 schizophrenia 8_10388815 rs12543645 ENSG00000253641.5 LINC03022 -85750 1.98e-05 0.426489 3e-08 schizophrenia 8_10388815 rs12543645 ENSG00000255020.1 TDH-AS1 -958687 1.39e-05 0.379956 3e-08 schizophrenia 8_10388815 rs12543645 ENSG00000253641.5 LINC03022 -85750 1.98e-05 0.426489 3e-07 schizophrenia 8_10388815 rs12543645 ENSG00000255020.1 TDH-AS1 -958687 1.39e-05 0.379956 3e-07 schizophrenia 8_10392538 rs12541491 ENSG00000255020.1 TDH-AS1 -954964 1.39e-05 0.379956 3e-07 schizophrenia 8_10392538 rs12541491 ENSG00000253641.5 LINC03022 -82027 1.98e-05 0.426489 3e-07 schizophrenia 8_142657606 rs1137522 ENSG00000234616.8 JRK -24314 2.35e-06 -0.264826 5e-09 schizophrenia 8_143572424 rs4873803 ENSG00000147813.15 NAPRT -5933 8.85e-11 0.653188 1e-09 schizophrenia 8_143573145 rs10866912 ENSG00000147813.15 NAPRT -5212 1.96e-11 0.679113 4e-08 schizophrenia 8_38351611 rs10156310 ENSG00000085788.13 DDHD2 126393 3.44e-05 0.275082 6e-10 schizophrenia 8_38390788 rs112537273 ENSG00000085788.13 DDHD2 165570 2.94e-05 0.278644 1e-12 schizophrenia 8_38390788 rs112537273 ENSG00000085788.13 DDHD2 165570 2.94e-05 0.278644 1e-06 schizophrenia 8_38390788 rs112537273 ENSG00000085788.13 DDHD2 165570 2.94e-05 0.278644 1e-11 schizophrenia 8_38390788 rs112537273 ENSG00000085788.13 DDHD2 165570 2.94e-05 0.278644 2e-07 schizophrenia 8_8234503 rs2980436 ENSG00000253893.2 FAM85B 7889 9.38e-21 -0.954191 4e-07 schizophrenia 8_8234503 rs2980436 ENSG00000173295.7 FAM86B3P 5908 2.54e-09 -0.425384 4e-07 schizophrenia 8_8234503 rs2980436 ENSG00000233609.3 RPL10P19 -726697 1.14e-05 0.425889 4e-07 schizophrenia 8_8234503 rs2980436 ENSG00000253893.2 FAM85B 7889 9.38e-21 -0.954191 2e-08 schizophrenia 8_8234503 rs2980436 ENSG00000173295.7 FAM86B3P 5908 2.54e-09 -0.425384 2e-08 schizophrenia 8_8234503 rs2980436 ENSG00000233609.3 RPL10P19 -726697 1.14e-05 0.425889 2e-08 schizophrenia 8_8234883 rs1878561 ENSG00000173295.7 FAM86B3P 6288 1.56e-10 -0.431614 1e-07 schizophrenia 8_8234883 rs1878561 ENSG00000233609.3 RPL10P19 -726317 9.19e-06 0.410526 1e-07 schizophrenia 8_8234883 rs1878561 ENSG00000253893.2 FAM85B 8269 4.12e-21 -0.916733 1e-07 schizophrenia 8_8240516 rs2945232 ENSG00000233609.3 RPL10P19 -720684 2.44e-06 0.45061 2e-08 schizophrenia 8_8240516 rs2945232 ENSG00000253893.2 FAM85B 13902 2.75e-22 -0.97068 2e-08 schizophrenia 8_8240516 rs2945232 ENSG00000173295.7 FAM86B3P 11921 3.42e-09 -0.418605 2e-08 schizophrenia 8_8517326 rs12546760 ENSG00000173295.7 FAM86B3P 288731 3.37e-06 -0.343227 4e-08 schizophrenia 8_8517326 rs12546760 ENSG00000233609.3 RPL10P19 -443874 1.85e-05 0.419229 4e-08 schizophrenia 8_8517326 rs12546760 ENSG00000253893.2 FAM85B 290712 1.75e-14 -0.830582 4e-08 schizophrenia 8_9176638 rs367543 ENSG00000253893.2 FAM85B 950024 1.24e-12 -0.792196 8e-06 schizophrenia 8_9176638 rs367543 ENSG00000233609.3 RPL10P19 215438 2.78e-06 0.461916 8e-06 schizophrenia 8_9176638 rs367543 ENSG00000173295.7 FAM86B3P 948043 7.35e-06 -0.336753 8e-06 schizophrenia 9_128846507 rs2977993 ENSG00000171097.13 KYAT1 -35987 4.06e-07 0.321548 2e-06 schizophrenia X_153942092 rs2269372 ENSG00000177854.7 TMEM187 -30235 1.23e-07 -0.384906 4e-08