DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE schizophrenia 1_109354481 rs11142 ENSG00000134222.16 PSRC1 71295 4.26e-11 0.51139 7e-06 schizophrenia 1_109354481 rs11142 ENSG00000134222.16 PSRC1 71295 4.26e-11 0.51139 7e-06 schizophrenia 1_109498058 rs2297797 ENSG00000221986.6 MYBPHL 191017 9.47e-09 0.598627 3e-08 schizophrenia 1_109498058 rs2297797 ENSG00000181754.6 AMIGO1 -11680 1.8e-07 -0.280659 3e-08 schizophrenia 1_109498058 rs2297797 ENSG00000134222.16 PSRC1 214872 1.42e-15 0.57213 3e-08 schizophrenia 1_109498058 rs2297797 ENSG00000134243.11 SORT1 100107 2.95e-05 0.213848 3e-08 schizophrenia 1_147611315 rs583583 ENSG00000162836.11 ACP6 -59181 1.07e-06 0.456995 6e-07 schizophrenia 1_154877295 rs12069356 ENSG00000143603.18 KCNN3 7015 2.63e-05 -0.315743 2e-06 schizophrenia 1_173677634 rs61826793 ENSG00000162753.11 SLC9C2 74863 4.24e-06 0.736382 4e-08 schizophrenia 1_211436426 rs35771425 ENSG00000236809.2 SNX25P1 19401 8.71e-07 0.68525 5e-12 schizophrenia 1_2455662 rs4648845 ENSG00000149527.17 PLCH2 29682 1.04e-05 -0.271272 2e-09 schizophrenia 1_2455662 rs4648845 ENSG00000149527.17 PLCH2 29682 1.04e-05 -0.271272 9e-10 schizophrenia 1_2455662 rs4648845 ENSG00000149527.17 PLCH2 29682 1.04e-05 -0.271272 6e-09 schizophrenia 1_2455662 rs4648845 ENSG00000149527.17 PLCH2 29682 1.04e-05 -0.271272 7e-12 schizophrenia 1_31359023 rs7551345 ENSG00000084628.9 NKAIN1 119469 2.76e-05 -0.513962 4e-06 schizophrenia 10_100146576 rs975752 ENSG00000196072.11 BLOC1S2 -140136 6.13e-06 -0.512128 5e-06 schizophrenia 10_100152437 rs1408579 ENSG00000095485.16 CWF19L1 -115243 1.77e-14 0.614802 2e-08 schizophrenia 10_102852578 rs11191419 ENSG00000214435.7 AS3MT -16938 1.3e-16 -0.659088 6e-19 schizophrenia 10_102852578 rs11191419 ENSG00000166275.15 BORCS7 -1645 8.18e-14 -0.557697 6e-19 schizophrenia 10_102852578 rs11191419 ENSG00000214435.7 AS3MT -16938 1.3e-16 -0.659088 3e-18 schizophrenia 10_102852578 rs11191419 ENSG00000166275.15 BORCS7 -1645 8.18e-14 -0.557697 3e-18 schizophrenia 10_102852578 rs11191419 ENSG00000214435.7 AS3MT -16938 1.3e-16 -0.659088 1e-16 schizophrenia 10_102852578 rs11191419 ENSG00000166275.15 BORCS7 -1645 8.18e-14 -0.557697 1e-16 schizophrenia 10_102866129 rs11191424 ENSG00000166275.15 BORCS7 11906 1e-13 -0.557875 4e-20 schizophrenia 10_102866129 rs11191424 ENSG00000214435.7 AS3MT -3387 2.12e-16 -0.657826 4e-20 schizophrenia 10_102866129 rs11191424 ENSG00000166275.15 BORCS7 11906 1e-13 -0.557875 3e-16 schizophrenia 10_102866129 rs11191424 ENSG00000214435.7 AS3MT -3387 2.12e-16 -0.657826 3e-16 schizophrenia 10_102989968 rs10883816 ENSG00000214435.7 AS3MT 120452 1.53e-09 -0.482478 4e-11 schizophrenia 10_102989968 rs10883816 ENSG00000166275.15 BORCS7 135745 5.23e-08 -0.402613 4e-11 schizophrenia 10_102989968 rs10883816 ENSG00000138111.14 MFSD13A 528573 2.77e-05 -0.390419 4e-11 schizophrenia 10_103016151 rs7914558 ENSG00000166275.15 BORCS7 161928 9.35e-08 -0.394615 2e-08 schizophrenia 10_103016151 rs7914558 ENSG00000214435.7 AS3MT 146635 2.84e-10 -0.498218 2e-08 schizophrenia 10_103016151 rs7914558 ENSG00000138111.14 MFSD13A 554756 1.43e-05 -0.4016 2e-08 schizophrenia 10_103016151 rs7914558 ENSG00000166275.15 BORCS7 161928 9.35e-08 -0.394615 2e-09 schizophrenia 10_103016151 rs7914558 ENSG00000214435.7 AS3MT 146635 2.84e-10 -0.498218 2e-09 schizophrenia 10_103016151 rs7914558 ENSG00000138111.14 MFSD13A 554756 1.43e-05 -0.4016 2e-09 schizophrenia 11_104802933 rs11226509 ENSG00000256422.5 LINC02552 193612 5.69e-09 -0.562694 1e-08 schizophrenia 11_104802933 rs11226509 ENSG00000256422.5 LINC02552 193612 5.69e-09 -0.562694 3e-08 schizophrenia 11_104807143 rs1144403 ENSG00000256422.5 LINC02552 197822 5.69e-09 -0.562694 8e-06 schizophrenia 11_130848816 rs10791098 ENSG00000120451.10 SNX19 -67693 1.26e-10 -0.573436 2e-12 schizophrenia 11_130848918 rs10791099 ENSG00000120451.10 SNX19 -67591 1.26e-10 -0.573436 1e-08 schizophrenia 11_130849166 rs10750450 ENSG00000120451.10 SNX19 -67343 1.26e-10 -0.573436 7e-13 schizophrenia 11_130861542 rs73022874 ENSG00000120451.10 SNX19 -54967 3.26e-08 0.590041 5e-10 schizophrenia 11_130935439 rs7112616 ENSG00000120451.10 SNX19 18930 8.13e-08 -0.481932 2e-09 schizophrenia 11_130941461 rs35774874 ENSG00000120451.10 SNX19 24952 7.7e-08 -0.466708 2e-11 schizophrenia 11_130941461 rs35774874 ENSG00000120451.10 SNX19 24952 7.7e-08 -0.466708 2e-09 schizophrenia 11_130947684 rs7940866 ENSG00000120451.10 SNX19 31175 7.42e-07 -0.428661 2e-09 schizophrenia 11_130960853 rs10894294 ENSG00000120451.10 SNX19 44344 3.87e-08 -0.478961 3e-06 schizophrenia 11_130960853 rs10894294 ENSG00000120451.10 SNX19 44344 3.87e-08 -0.478961 3e-07 schizophrenia 11_130976537 rs10791106 ENSG00000120451.10 SNX19 60028 1.4e-07 -0.471526 1e-15 schizophrenia 11_130986204 rs10791111 ENSG00000120451.10 SNX19 69695 1.59e-07 -0.473369 1e-08 schizophrenia 11_131022000 rs10894308 ENSG00000120451.10 SNX19 105491 4.54e-06 -0.413241 2e-08 schizophrenia 11_131022000 rs10894308 ENSG00000120451.10 SNX19 105491 4.54e-06 -0.413241 2e-08 schizophrenia 11_131022000 rs10894308 ENSG00000120451.10 SNX19 105491 4.54e-06 -0.413241 9e-09 schizophrenia 11_30245491 rs515997 ENSG00000152219.4 ARL14EP -77560 4.15e-06 0.378572 3e-09 schizophrenia 11_30357012 rs1765142 ENSG00000152219.4 ARL14EP 33961 3.2e-05 0.354926 2e-06 schizophrenia 12_122830405 rs111589530 ENSG00000256092.2 SBNO1-AS1 -533463 7.5e-08 -1.27469 3e-09 schizophrenia 12_56055651 rs7302200 ENSG00000197728.9 RPS26 13798 9.11e-20 1.06964 1e-14 schizophrenia 13_21388068 rs9316337 ENSG00000224429.7 LINC00539 39347 2.32e-07 -0.50529 2e-06 schizophrenia 13_43898119 rs7321596 ENSG00000151773.12 CCDC122 23192 3.63e-06 -0.392119 3e-08 schizophrenia 13_44132132 rs9595066 ENSG00000227258.5 SMIM2-AS1 21681 1.01e-11 -1.0244 1e-08 schizophrenia 13_44132132 rs9595066 ENSG00000227258.5 SMIM2-AS1 21681 1.01e-11 -1.0244 4e-06 schizophrenia 13_49605318 rs7322886 ENSG00000136144.11 RCBTB1 19735 1.08e-11 0.52307 2e-08 schizophrenia 14_103345983 rs12432904 ENSG00000259775.1 EIF5-DT 13616 6.68e-09 0.517137 4e-06 schizophrenia 14_22912771 rs9989230 ENSG00000092036.18 HAUS4 -44390 3.4e-12 -0.443299 4e-12 schizophrenia 14_59498575 rs111803315 ENSG00000126790.11 L3HYPDH 14145 3.46e-05 -1.05502 3e-06 schizophrenia 14_70894697 rs989501 ENSG00000100731.15 PCNX1 -12708 4.23e-06 0.306748 1e-11 schizophrenia 15_52594765 rs4776059 ENSG00000047346.12 FAM214A -115052 1.87e-07 0.40642 4e-06 schizophrenia 15_58905470 rs35477914 ENSG00000245975.2 MINDY2-DT 134496 1.68e-05 0.378847 9e-07 schizophrenia 15_58920827 rs28473013 ENSG00000245975.2 MINDY2-DT 149853 1.68e-05 0.378847 1e-08 schizophrenia 15_58920827 rs28473013 ENSG00000245975.2 MINDY2-DT 149853 1.68e-05 0.378847 2e-08 schizophrenia 15_63248373 rs1986112 ENSG00000103642.11 LACTB 126573 3.43e-06 -0.338806 2e-06 schizophrenia 15_82558175 rs17507216 ENSG00000278662.4 GOLGA6L10 208700 2.32e-05 -0.621667 4e-10 schizophrenia 15_82558175 rs17507216 ENSG00000103723.12 AP3B2 -151739 1.95e-05 0.238844 4e-10 schizophrenia 15_84562751 rs12902973 ENSG00000259295.6 CSPG4P12 -628687 3.18e-05 0.501586 4e-10 schizophrenia 15_84562751 rs12902973 ENSG00000259295.6 CSPG4P12 -628687 3.18e-05 0.501586 9e-11 schizophrenia 15_84581411 rs11633534 ENSG00000225151.10 GOLGA2P7 351275 4.85e-05 -0.495223 8e-14 schizophrenia 15_84594463 rs11638445 ENSG00000225151.10 GOLGA2P7 364327 2.32e-05 -0.520969 3e-10 schizophrenia 15_84606344 rs748455 ENSG00000259295.6 CSPG4P12 -585094 4.46e-06 0.545953 6e-13 schizophrenia 15_84664594 rs12908161 ENSG00000259295.6 CSPG4P12 -526844 1.59e-06 0.591554 5e-10 schizophrenia 15_84664594 rs12908161 ENSG00000259295.6 CSPG4P12 -526844 1.59e-06 0.591554 9e-10 schizophrenia 15_84806000 rs35630683 ENSG00000259295.6 CSPG4P12 -385438 1.87e-06 0.594628 5e-09 schizophrenia 15_84812610 rs35828350 ENSG00000259295.6 CSPG4P12 -378828 1.87e-06 0.594628 6e-11 schizophrenia 16_11983775 rs12922317 ENSG00000234719.8 NPIPB2 7132 9.86e-19 1.07004 9e-07 schizophrenia 16_15062041 rs2966157 ENSG00000183793.13 NPIPA5 -319006 4.83e-07 0.683205 6e-11 schizophrenia 16_28874338 rs7359397 ENSG00000178952.10 TUFM 27930 1.68e-05 0.272608 7e-11 schizophrenia 16_28874338 rs7359397 ENSG00000197165.10 SULT1A2 277229 3.31e-07 0.637617 7e-11 schizophrenia 16_29946895 rs8054556 ENSG00000169592.14 INO80E -48399 1.81e-05 -0.347193 4e-10 schizophrenia 16_29946895 rs8054556 ENSG00000169592.14 INO80E -48399 1.81e-05 -0.347193 4e-11 schizophrenia 16_29954956 rs11646127 ENSG00000090238.11 YPEL3 -141288 1.02e-07 0.356063 6e-13 schizophrenia 16_29983601 rs3814883 ENSG00000090238.11 YPEL3 -112643 3.6e-05 0.281013 2e-09 schizophrenia 16_29983601 rs3814883 ENSG00000090238.11 YPEL3 -112643 3.6e-05 0.281013 7e-12 schizophrenia 16_29989580 rs3814881 ENSG00000090238.11 YPEL3 -106664 5.78e-07 0.345487 4e-12 schizophrenia 16_29989580 rs3814881 ENSG00000090238.11 YPEL3 -106664 5.78e-07 0.345487 7e-12 schizophrenia 16_29989580 rs3814881 ENSG00000090238.11 YPEL3 -106664 5.78e-07 0.345487 8e-13 schizophrenia 16_4420026 rs6500596 ENSG00000153406.13 NMRAL1 -75737 1.7e-06 -0.403709 1e-06 schizophrenia 16_4420026 rs6500596 ENSG00000262246.5 CORO7 -5679 2.29e-06 0.373196 1e-06 schizophrenia 16_4420026 rs6500596 ENSG00000153406.13 NMRAL1 -75737 1.7e-06 -0.403709 5e-09 schizophrenia 16_4420026 rs6500596 ENSG00000262246.5 CORO7 -5679 2.29e-06 0.373196 5e-09 schizophrenia 16_4420026 rs6500596 ENSG00000153406.13 NMRAL1 -75737 1.7e-06 -0.403709 2e-07 schizophrenia 16_4420026 rs6500596 ENSG00000262246.5 CORO7 -5679 2.29e-06 0.373196 2e-07 schizophrenia 16_69940756 rs3748386 ENSG00000198373.12 WWP2 178450 1.13e-05 -0.357488 6e-09 schizophrenia 16_69940756 rs3748386 ENSG00000226232.8 NPIPB14P -55432 2.26e-06 -0.496647 6e-09 schizophrenia 16_89806562 rs12449000 ENSG00000204991.10 SPIRE2 -11617 2.68e-05 0.294403 5e-06 schizophrenia 17_12993236 rs9908102 ENSG00000006744.18 ELAC2 -24951 1.9e-18 0.67605 2e-06 schizophrenia 17_2221430 rs2131700 ENSG00000167720.12 SRR -81953 4.92e-10 -0.573833 2e-08 schizophrenia 17_36544271 rs12941866 ENSG00000278535.4 DHRS11 -47527 2.26e-05 -0.24578 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000238083.7 LRRC37A2 -844533 1.98e-17 -0.973294 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000214425.7 LRRC37A4P 116643 2.59e-21 1.05058 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000262500.1 MAPK8IP1P1 -576628 1.69e-11 -0.909861 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000176681.14 LRRC37A -625755 7.05e-07 -0.712282 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000204650.14 LINC02210 46650 1.36e-19 -1.0223 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000263503.1 MAPK8IP1P2 64638 6.8e-13 -0.949848 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000264070.1 DND1P1 81107 3.56e-12 -0.903854 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000214401.4 KANSL1-AS1 -526598 3.64e-16 -0.930224 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000264589.2 MAPT-AS1 -228652 1.37e-06 0.510559 3e-08 schizophrenia 17_45779092 rs35076622 ENSG00000204650.14 LINC02210 158764 1.6e-13 0.799113 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000262500.1 MAPK8IP1P1 -464514 1.36e-05 0.564759 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000214401.4 KANSL1-AS1 -414484 2.68e-10 0.691144 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000214425.7 LRRC37A4P 228757 2.6e-11 -0.73762 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000238083.7 LRRC37A2 -732419 6.04e-07 0.575039 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000263503.1 MAPK8IP1P2 176752 4.8e-09 0.727301 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000264070.1 DND1P1 193221 5.7e-11 0.778354 3e-12 schizophrenia 17_46784796 rs199503 ENSG00000176681.14 LRRC37A 492063 1.18e-07 0.797409 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000264589.2 MAPT-AS1 889166 1.99e-06 -0.532239 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000262500.1 MAPK8IP1P1 541190 5.82e-12 0.978936 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000238083.7 LRRC37A2 273285 1.51e-13 0.93033 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000214401.4 KANSL1-AS1 591220 1.29e-17 1.01607 3e-09 schizophrenia 18_12947463 rs3809912 ENSG00000101639.18 CEP192 -43899 2.89e-27 -0.924421 1e-08 schizophrenia 18_79862879 rs28735056 ENSG00000261126.7 RBFADN -184021 1.67e-06 -0.614085 1e-12 schizophrenia 18_79862879 rs28735056 ENSG00000261126.7 RBFADN -184021 1.67e-06 -0.614085 5e-10 schizophrenia 18_79862879 rs28735056 ENSG00000261126.7 RBFADN -184021 1.67e-06 -0.614085 5e-09 schizophrenia 18_79928124 rs55642704 ENSG00000122490.18 SLC66A2 -23540 2.25e-05 0.339348 4e-11 schizophrenia 18_79928124 rs55642704 ENSG00000261126.7 RBFADN -118776 2.46e-08 -0.666382 4e-11 schizophrenia 19_19529715 rs4808967 ENSG00000129933.20 MAU2 208870 1.66e-05 -0.165664 4e-10 schizophrenia 19_19629920 rs880090 ENSG00000064547.13 LPAR2 990 3.77e-06 0.33188 1e-09 schizophrenia 19_41559909 rs4803480 ENSG00000239736.2 CEACAMP3 -39826 6.98e-09 0.712896 1e-07 schizophrenia 2_129999731 rs13020137 ENSG00000180178.10 FAR2P1 -51400 2.61e-05 -0.49557 5e-06 schizophrenia 2_129999731 rs13020137 ENSG00000225449.3 RAB6C-AS1 20068 1.47e-06 0.447127 5e-06 schizophrenia 2_129999731 rs13020137 ENSG00000214100.8 PLAC9P1 65414 1.55e-05 0.426334 5e-06 schizophrenia 2_129999731 rs13020137 ENSG00000222014.5 RAB6C 19264 1.39e-05 0.453104 5e-06 schizophrenia 2_199851396 rs796364 ENSG00000226124.6 FTCDNL1 223 3.1e-06 0.570721 5e-14 schizophrenia 2_199851396 rs796364 ENSG00000226124.6 FTCDNL1 223 3.1e-06 0.570721 3e-13 schizophrenia 2_199851396 rs796364 ENSG00000226124.6 FTCDNL1 223 3.1e-06 0.570721 1e-14 schizophrenia 2_199851396 rs796364 ENSG00000226124.6 FTCDNL1 223 3.1e-06 0.570721 2e-16 schizophrenia 2_199851396 rs796364 ENSG00000226124.6 FTCDNL1 223 3.1e-06 0.570721 5e-10 schizophrenia 2_199871784 rs11693528 ENSG00000226124.6 FTCDNL1 20611 9.98e-06 -0.57353 1e-12 schizophrenia 2_199871784 rs11693528 ENSG00000226124.6 FTCDNL1 20611 9.98e-06 -0.57353 3e-14 schizophrenia 2_219180313 rs7577690 ENSG00000115649.15 CNPPD1 2391 6.67e-21 -0.656553 5e-08 schizophrenia 2_219196879 rs6707588 ENSG00000115649.15 CNPPD1 18957 2.63e-12 0.541768 9e-07 schizophrenia 2_25376303 rs141216273 ENSG00000235072.2 ARNILA 458 1.43e-08 1.63439 5e-06 schizophrenia 2_37323760 rs7584565 ENSG00000115816.14 CEBPZ 92130 3.56e-08 -0.382547 9e-09 schizophrenia 2_37334786 rs2372993 ENSG00000115816.14 CEBPZ 103156 2.19e-08 -0.391523 5e-07 schizophrenia 2_37334786 rs2372993 ENSG00000115816.14 CEBPZ 103156 2.19e-08 -0.391523 7e-07 schizophrenia 2_47993197 rs17396122 ENSG00000170802.15 FOXN2 -321440 1.21e-10 0.688891 1e-06 schizophrenia 2_48153579 rs12475492 ENSG00000170802.15 FOXN2 -161058 3.9e-10 0.686956 6e-09 schizophrenia 2_48422566 rs7565792 ENSG00000170802.15 FOXN2 107929 2.32e-05 -0.280248 7e-06 schizophrenia 2_73404436 rs11899902 ENSG00000144034.14 TPRKB -332964 2.6e-05 0.327419 5e-08 schizophrenia 2_73404436 rs11899902 ENSG00000144035.3 NAT8 -237957 2.07e-05 0.595175 5e-08 schizophrenia 20_1527453 rs2263655 ENSG00000101307.15 SIRPB1 -92608 1.93e-06 -0.798199 8e-10 schizophrenia 21_20741130 rs34328150 ENSG00000224924.6 LINC00320 -62086 9.54e-07 -0.416248 4e-08 schizophrenia 21_36109179 rs6517329 ENSG00000236830.6 CBR3-AS1 -66636 2.2e-05 -0.446648 8e-06 schizophrenia 21_37221319 rs13864 ENSG00000182670.13 TTC3 148093 7.72e-07 0.458913 8e-06 schizophrenia 22_41944504 rs1023497 ENSG00000183172.8 SMDT1 -135187 8.13e-06 -0.305707 9e-09 schizophrenia 22_41944840 rs1023500 ENSG00000183172.8 SMDT1 -134851 4.94e-06 -0.312124 3e-08 schizophrenia 22_41944840 rs1023500 ENSG00000183172.8 SMDT1 -134851 4.94e-06 -0.312124 8e-09 schizophrenia 22_42141587 rs1800754 ENSG00000198951.11 NAGA 70745 1.31e-06 -0.21519 2e-15 schizophrenia 22_42141587 rs1800754 ENSG00000100197.20 CYP2D6 10681 9.91e-19 0.774222 2e-15 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 6.98e-10 -0.598088 3e-08 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 6.98e-10 -0.598088 1e-10 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 6.98e-10 -0.598088 5e-09 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 6.98e-10 -0.598088 1e-11 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 6.98e-10 -0.598088 1e-08 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 5.07e-09 -0.601099 1e-08 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 5.07e-09 -0.601099 2e-14 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 5.07e-09 -0.601099 5e-10 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 5.07e-09 -0.601099 2e-09 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 5.07e-09 -0.601099 6e-10 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 5.07e-09 -0.601099 1e-09 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 5.07e-09 -0.601099 2e-09 schizophrenia 3_135979287 rs7641070 ENSG00000261758.1 STAG1-DT -773343 2.92e-05 -0.526986 6e-06 schizophrenia 3_136095167 rs1278493 ENSG00000261758.1 STAG1-DT -657463 2.33e-08 -0.596441 1e-08 schizophrenia 3_136418580 rs10935182 ENSG00000261758.1 STAG1-DT -334050 5.98e-07 0.550386 7e-10 schizophrenia 3_136435986 rs66691851 ENSG00000261758.1 STAG1-DT -316644 2.12e-09 0.641761 4e-15 schizophrenia 3_136435986 rs66691851 ENSG00000261758.1 STAG1-DT -316644 2.12e-09 0.641761 2e-13 schizophrenia 3_136435986 rs66691851 ENSG00000261758.1 STAG1-DT -316644 2.12e-09 0.641761 4e-18 schizophrenia 3_136435986 rs66691851 ENSG00000261758.1 STAG1-DT -316644 2.12e-09 0.641761 2e-11 schizophrenia 3_136435986 rs66691851 ENSG00000261758.1 STAG1-DT -316644 2.12e-09 0.641761 2e-10 schizophrenia 3_136555593 rs7427564 ENSG00000261758.1 STAG1-DT -197037 1e-09 0.659997 2e-10 schizophrenia 3_136555593 rs7427564 ENSG00000261758.1 STAG1-DT -197037 1e-09 0.659997 2e-11 schizophrenia 3_136569563 rs7432375 ENSG00000261758.1 STAG1-DT -183067 2.03e-09 0.644131 7e-11 schizophrenia 3_136569563 rs7432375 ENSG00000261758.1 STAG1-DT -183067 2.03e-09 0.644131 6e-10 schizophrenia 3_136569563 rs7432375 ENSG00000261758.1 STAG1-DT -183067 2.03e-09 0.644131 4e-12 schizophrenia 3_136569563 rs7432375 ENSG00000261758.1 STAG1-DT -183067 2.03e-09 0.644131 3e-08 schizophrenia 3_136571687 rs10935185 ENSG00000261758.1 STAG1-DT -180943 1e-09 0.659997 5e-09 schizophrenia 3_136590868 rs940174 ENSG00000261758.1 STAG1-DT -161762 9.18e-10 0.655921 5e-10 schizophrenia 3_136590868 rs940174 ENSG00000261758.1 STAG1-DT -161762 9.18e-10 0.655921 3e-09 schizophrenia 3_136681578 rs7618871 ENSG00000261758.1 STAG1-DT -71052 1e-09 -0.659997 1e-08 schizophrenia 3_38396881 rs1858740 ENSG00000157036.12 EXOG -99246 1.9e-09 -0.447929 5e-06 schizophrenia 3_50002761 rs4688756 ENSG00000004534.14 RBM6 62754 3.38e-15 -0.504713 2e-17 schizophrenia 3_50336862 rs2073499 ENSG00000186792.16 HYAL3 37394 0.000103413 0.424633 3e-08 schizophrenia 3_50336862 rs2073499 ENSG00000186792.16 HYAL3 37394 0.000103413 0.424633 3e-08 schizophrenia 3_50336862 rs2073499 ENSG00000186792.16 HYAL3 37394 0.000103413 0.424633 1e-13 schizophrenia 3_52234850 rs353547 ENSG00000164088.17 PPM1M -10943 1.19e-06 0.321408 4e-08 schizophrenia 3_52799203 rs2535629 ENSG00000055955.15 ITIH4 -31536 5.5e-06 0.405948 2e-11 schizophrenia 3_52799203 rs2535629 ENSG00000055955.15 ITIH4 -31536 5.5e-06 0.405948 3e-12 schizophrenia 3_52804386 rs4687552 ENSG00000164088.17 PPM1M 558593 6.84e-05 -0.303059 1e-08 schizophrenia 3_52804386 rs4687552 ENSG00000055955.15 ITIH4 -26353 8.6e-07 0.420643 1e-08 schizophrenia 3_52821213 rs2239547 ENSG00000055955.15 ITIH4 -9526 3.38e-11 0.537927 6e-08 schizophrenia 3_53002190 rs2581794 ENSG00000242142.1 SERBP1P3 -62901 4.55e-07 0.477952 3e-07 schizophrenia 3_53108964 rs2115780 ENSG00000242142.1 SERBP1P3 43873 4.92e-09 0.623537 4e-08 schizophrenia 3_53421542 rs2358740 ENSG00000163931.15 TKT 165511 3.64e-10 -0.496579 1e-06 schizophrenia 3_53421542 rs2358740 ENSG00000163931.15 TKT 165511 3.64e-10 -0.496579 4e-08 schizophrenia 3_53421542 rs2358740 ENSG00000163931.15 TKT 165511 3.64e-10 -0.496579 5e-07 schizophrenia 3_53421542 rs2358740 ENSG00000163931.15 TKT 165511 3.64e-10 -0.496579 3e-07 schizophrenia 3_53421542 rs2358740 ENSG00000163931.15 TKT 165511 3.64e-10 -0.496579 7e-08 schizophrenia 4_103053903 rs7688014 ENSG00000145354.9 CISD2 184925 2.16e-05 -0.342409 3e-06 schizophrenia 4_175810250 rs12498839 ENSG00000249106.1 GPM6A-DT 19943 6.01e-06 -1.02946 2e-06 schizophrenia 5_140737079 rs2531360 ENSG00000239389.7 PCDHA13 -145564 2.92e-08 -0.562492 2e-10 schizophrenia 5_140737079 rs2531360 ENSG00000204967.10 PCDHA4 -69850 9.19e-07 0.482574 2e-10 schizophrenia 5_140737079 rs2531360 ENSG00000204963.5 PCDHA7 -97169 6.23e-06 0.412867 2e-10 schizophrenia 5_140759116 rs7445192 ENSG00000204963.5 PCDHA7 -75132 9.91e-07 0.458164 5e-07 schizophrenia 5_140759116 rs7445192 ENSG00000239389.7 PCDHA13 -123527 6.18e-09 -0.604809 5e-07 schizophrenia 5_140759116 rs7445192 ENSG00000204967.10 PCDHA4 -47813 4.36e-09 0.581945 5e-07 schizophrenia 5_140767314 rs13168670 ENSG00000239389.7 PCDHA13 -115329 1.89e-08 0.586439 4e-07 schizophrenia 5_140767314 rs13168670 ENSG00000204963.5 PCDHA7 -66934 1.32e-06 -0.452194 4e-07 schizophrenia 5_140767314 rs13168670 ENSG00000204967.10 PCDHA4 -39615 2.62e-09 -0.587309 4e-07 schizophrenia 5_140767314 rs13168670 ENSG00000239389.7 PCDHA13 -115329 1.89e-08 0.586439 6e-08 schizophrenia 5_140767314 rs13168670 ENSG00000204963.5 PCDHA7 -66934 1.32e-06 -0.452194 6e-08 schizophrenia 5_140767314 rs13168670 ENSG00000204967.10 PCDHA4 -39615 2.62e-09 -0.587309 6e-08 schizophrenia 5_140774630 rs7733403 ENSG00000204963.5 PCDHA7 -59618 1.32e-06 -0.452194 2e-08 schizophrenia 5_140774630 rs7733403 ENSG00000239389.7 PCDHA13 -108013 1.89e-08 0.586439 2e-08 schizophrenia 5_140774630 rs7733403 ENSG00000204967.10 PCDHA4 -32299 2.62e-09 -0.587309 2e-08 schizophrenia 5_140774630 rs7733403 ENSG00000204963.5 PCDHA7 -59618 1.32e-06 -0.452194 1e-08 schizophrenia 5_140774630 rs7733403 ENSG00000239389.7 PCDHA13 -108013 1.89e-08 0.586439 1e-08 schizophrenia 5_140774630 rs7733403 ENSG00000204967.10 PCDHA4 -32299 2.62e-09 -0.587309 1e-08 schizophrenia 5_140774630 rs7733403 ENSG00000204963.5 PCDHA7 -59618 1.32e-06 -0.452194 9e-11 schizophrenia 5_140774630 rs7733403 ENSG00000239389.7 PCDHA13 -108013 1.89e-08 0.586439 9e-11 schizophrenia 5_140774630 rs7733403 ENSG00000204967.10 PCDHA4 -32299 2.62e-09 -0.587309 9e-11 schizophrenia 5_147055600 rs11958187 ENSG00000156475.18 PPP2R2B -29184 5.72e-06 0.394357 9e-09 schizophrenia 6_25874195 rs13198474 ENSG00000186470.13 BTN3A2 -490964 2e-09 -1.25542 3e-20 schizophrenia 6_25885586 rs629444 ENSG00000186470.13 BTN3A2 -479573 9.92e-08 -0.885361 2e-13 schizophrenia 6_26089797 rs61472021 ENSG00000186470.13 BTN3A2 -275362 5e-05 -0.591196 1e-13 schizophrenia 6_26097156 rs6918586 ENSG00000272462.2 LINC02980 104494 1.38e-05 0.541895 6e-10 schizophrenia 6_26173250 rs34661691 ENSG00000186470.13 BTN3A2 -191909 7.5e-07 -0.742179 6e-22 schizophrenia 6_26196365 rs67575965 ENSG00000186470.13 BTN3A2 -168794 7.42e-06 -0.51501 2e-09 schizophrenia 6_26196365 rs67575965 ENSG00000274750.2 H3C6 -27834 9.08e-07 0.504093 2e-09 schizophrenia 6_26196365 rs67575965 ENSG00000186470.13 BTN3A2 -168794 7.42e-06 -0.51501 2e-09 schizophrenia 6_26196365 rs67575965 ENSG00000274750.2 H3C6 -27834 9.08e-07 0.504093 2e-09 schizophrenia 6_26332377 rs9467711 ENSG00000186470.13 BTN3A2 -32782 1.23e-05 -0.744453 3e-19 schizophrenia 6_26332377 rs9467711 ENSG00000186470.13 BTN3A2 -32782 1.23e-05 -0.744453 2e-22 schizophrenia 6_26408323 rs75782365 ENSG00000186470.13 BTN3A2 43164 4.17e-12 -1.19758 8e-24 schizophrenia 6_26408323 rs75782365 ENSG00000186470.13 BTN3A2 43164 4.17e-12 -1.19758 3e-25 schizophrenia 6_26408323 rs75782365 ENSG00000186470.13 BTN3A2 43164 4.17e-12 -1.19758 2e-27 schizophrenia 6_26409662 rs41266839 ENSG00000186470.13 BTN3A2 44503 4.17e-12 -1.19758 7e-27 schizophrenia 6_26466161 rs1977199 ENSG00000186470.13 BTN3A2 101002 9.8e-09 0.586153 1e-08 schizophrenia 6_26478024 rs34104395 ENSG00000186470.13 BTN3A2 112865 4.1e-12 -1.11706 9e-20 schizophrenia 6_26955320 rs9348739 ENSG00000186470.13 BTN3A2 590161 5.57e-10 -0.833843 5e-17 schizophrenia 6_27039908 rs35741362 ENSG00000186470.13 BTN3A2 674749 2.2e-06 -0.739729 2e-18 schizophrenia 6_27332531 rs13212562 ENSG00000186470.13 BTN3A2 967372 2.59e-09 -0.903861 3e-16 schizophrenia 6_27344299 rs764284 ENSG00000124613.8 ZNF391 -30316 3.76e-09 -0.585003 6e-11 schizophrenia 6_27654305 rs141342723 ENSG00000235109.7 ZSCAN31 -701966 3.43e-05 0.75356 4e-24 schizophrenia 6_27742386 rs17693963 ENSG00000235109.7 ZSCAN31 -613885 2.19e-05 0.720494 2e-09 schizophrenia 6_27742386 rs17693963 ENSG00000235109.7 ZSCAN31 -613885 2.19e-05 0.720494 3e-09 schizophrenia 6_27742386 rs17693963 ENSG00000235109.7 ZSCAN31 -613885 2.19e-05 0.720494 3e-11 schizophrenia 6_27742386 rs17693963 ENSG00000235109.7 ZSCAN31 -613885 2.19e-05 0.720494 3e-11 schizophrenia 6_27837477 rs34706883 ENSG00000235109.7 ZSCAN31 -518794 3.43e-05 0.75356 5e-27 schizophrenia 6_27837477 rs34706883 ENSG00000235109.7 ZSCAN31 -518794 3.43e-05 0.75356 2e-26 schizophrenia 6_27856988 rs200986 ENSG00000235109.7 ZSCAN31 -499283 1.36e-06 0.600048 2e-11 schizophrenia 6_27856988 rs200986 ENSG00000187987.9 ZSCAN23 -586514 7.31e-06 0.506397 2e-11 schizophrenia 6_27856988 rs200986 ENSG00000216901.1 ZNF603P -319200 8.16e-11 0.857264 2e-11 schizophrenia 6_28043874 rs202906 ENSG00000235109.7 ZSCAN31 -312397 1.29e-07 0.814686 3e-16 schizophrenia 6_28195002 rs1150688 ENSG00000216901.1 ZNF603P 18814 1.58e-22 1.06167 8e-11 schizophrenia 6_28195002 rs1150688 ENSG00000235109.7 ZSCAN31 -161269 1.03e-08 0.644317 8e-11 schizophrenia 6_28195002 rs1150688 ENSG00000187987.9 ZSCAN23 -248500 2.7e-08 0.566923 8e-11 schizophrenia 6_28230108 rs34787248 ENSG00000187987.9 ZSCAN23 -213394 2e-05 0.529837 2e-11 schizophrenia 6_28230108 rs34787248 ENSG00000235109.7 ZSCAN31 -126163 3.29e-07 0.690012 2e-11 schizophrenia 6_28230108 rs34787248 ENSG00000216901.1 ZNF603P 53920 2.26e-08 0.828787 2e-11 schizophrenia 6_28246920 rs17720293 ENSG00000187987.9 ZSCAN23 -196582 8.02e-05 0.583815 3e-23 schizophrenia 6_28246920 rs17720293 ENSG00000235109.7 ZSCAN31 -109351 2.52e-05 0.687587 3e-23 schizophrenia 6_28338894 rs13217619 ENSG00000137338.5 PGBD1 57322 0.000112035 0.463519 2e-29 schizophrenia 6_28338894 rs13217619 ENSG00000137338.5 PGBD1 57322 0.000112035 0.463519 1e-27 schizophrenia 6_28357424 rs6921919 ENSG00000216901.1 ZNF603P 181236 6.12e-05 0.581046 1e-19 schizophrenia 6_28387058 rs67981811 ENSG00000137338.5 PGBD1 105486 0.000112035 0.463519 5e-19 schizophrenia 6_28432761 rs7766356 ENSG00000187987.9 ZSCAN23 -10741 4.06e-05 0.549118 3e-21 schizophrenia 6_28432761 rs7766356 ENSG00000216901.1 ZNF603P 256573 2.07e-05 0.699119 3e-21 schizophrenia 6_28447190 rs16894116 ENSG00000216901.1 ZNF603P 271002 3.93e-05 0.599488 3e-21 schizophrenia 6_28447190 rs16894116 ENSG00000187987.9 ZSCAN23 3688 5.82e-05 0.476982 3e-21 schizophrenia 6_28594812 rs115031589 ENSG00000187987.9 ZSCAN23 151310 1.57e-05 0.534651 3e-20 schizophrenia 6_28594812 rs115031589 ENSG00000235109.7 ZSCAN31 238541 5.77e-06 0.619449 3e-20 schizophrenia 6_28594812 rs115031589 ENSG00000216901.1 ZNF603P 418624 2.9e-06 0.707341 3e-20 schizophrenia 6_28610509 rs116663187 ENSG00000235109.7 ZSCAN31 254238 3.04e-06 0.600727 2e-15 schizophrenia 6_28610509 rs116663187 ENSG00000216901.1 ZNF603P 434321 4.02e-06 0.659697 2e-15 schizophrenia 6_28691630 rs144911693 ENSG00000197062.11 ZSCAN26 424620 1.51e-05 -0.440447 5e-14 schizophrenia 6_28691630 rs144911693 ENSG00000216901.1 ZNF603P 515442 5.97e-05 0.528764 5e-14 schizophrenia 6_28744470 rs115329265 ENSG00000216901.1 ZNF603P 568282 0.000117614 0.593444 5e-36 schizophrenia 6_28744470 rs115329265 ENSG00000216901.1 ZNF603P 568282 0.000117614 0.593444 6e-33 schizophrenia 6_28744470 rs115329265 ENSG00000216901.1 ZNF603P 568282 0.000117614 0.593444 3e-31 schizophrenia 6_28744470 rs115329265 ENSG00000216901.1 ZNF603P 568282 0.000117614 0.593444 1e-27 schizophrenia 6_28744470 rs115329265 ENSG00000216901.1 ZNF603P 568282 0.000117614 0.593444 2e-27 schizophrenia 6_29015497 rs116757206 ENSG00000230795.3 HLA-K -911681 2.57e-05 -0.898382 1e-25 schizophrenia 6_29015497 rs116757206 ENSG00000235109.7 ZSCAN31 659226 6.57e-05 0.730613 1e-25 schizophrenia 6_29015497 rs116757206 ENSG00000137338.5 PGBD1 733925 0.000100161 0.463303 1e-25 schizophrenia 6_29015497 rs116757206 ENSG00000181126.13 HLA-V -775457 4.3e-05 -0.845253 1e-25 schizophrenia 6_29150075 rs144649399 ENSG00000235109.7 ZSCAN31 793804 1.51e-06 0.648925 1e-12 schizophrenia 6_29150075 rs144649399 ENSG00000216901.1 ZNF603P 973887 6.57e-06 0.679827 1e-12 schizophrenia 6_29276442 rs144447022 ENSG00000137338.5 PGBD1 994870 0.000100684 0.455667 2e-28 schizophrenia 6_29276442 rs144447022 ENSG00000181126.13 HLA-V -514512 5.82e-05 -0.818355 2e-28 schizophrenia 6_29276442 rs144447022 ENSG00000137338.5 PGBD1 994870 0.000100684 0.455667 9e-28 schizophrenia 6_29276442 rs144447022 ENSG00000181126.13 HLA-V -514512 5.82e-05 -0.818355 9e-28 schizophrenia 6_29638984 rs138488080 ENSG00000181126.13 HLA-V -151970 6.54e-05 -0.665602 3e-16 schizophrenia 6_29638984 rs138488080 ENSG00000176998.4 HCG4 -153452 5.3e-05 -0.698251 3e-16 schizophrenia 6_29638984 rs138488080 ENSG00000230795.3 HLA-K -288194 2.08e-10 -1.03538 3e-16 schizophrenia 6_29639270 rs114041423 ENSG00000281831.1 HCP5B -234513 3.55e-05 0.556997 1e-15 schizophrenia 6_29639270 rs114041423 ENSG00000230795.3 HLA-K -287908 1.39e-11 -0.98545 1e-15 schizophrenia 6_29642504 rs115374247 ENSG00000230795.3 HLA-K -284674 3.08e-07 -0.604082 2e-13 schizophrenia 6_29642504 rs115374247 ENSG00000230795.3 HLA-K -284674 3.08e-07 -0.604082 2e-13 schizophrenia 6_29660317 rs143363269 ENSG00000230795.3 HLA-K -266861 1.13e-11 -0.990568 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000176998.4 HCG4 -132119 6.89e-05 -0.624725 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000230795.3 HLA-K -266861 1.13e-11 -0.990568 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000176998.4 HCG4 -132119 6.89e-05 -0.624725 1e-10 schizophrenia 6_29681770 rs385492 ENSG00000235821.1 IFITM4P -69378 1.08e-05 -0.50672 1e-08 schizophrenia 6_29681770 rs385492 ENSG00000176998.4 HCG4 -110666 3.2e-06 -0.551094 1e-08 schizophrenia 6_29681770 rs385492 ENSG00000235821.1 IFITM4P -69378 1.08e-05 -0.50672 4e-09 schizophrenia 6_29681770 rs385492 ENSG00000176998.4 HCG4 -110666 3.2e-06 -0.551094 4e-09 schizophrenia 6_29696112 rs3131888 ENSG00000230795.3 HLA-K -231066 1.97e-06 -0.54027 7e-06 schizophrenia 6_29783215 rs144018888 ENSG00000176998.4 HCG4 -9221 3.95e-13 -0.79042 3e-12 schizophrenia 6_29783228 rs144373461 ENSG00000176998.4 HCG4 -9208 2.42e-13 -0.804017 6e-16 schizophrenia 6_29783228 rs144373461 ENSG00000230795.3 HLA-K -143950 9.92e-06 -0.524616 6e-16 schizophrenia 6_29783228 rs144373461 ENSG00000176998.4 HCG4 -9208 2.42e-13 -0.804017 2e-17 schizophrenia 6_29783228 rs144373461 ENSG00000230795.3 HLA-K -143950 9.92e-06 -0.524616 2e-17 schizophrenia 6_29783228 rs144373461 ENSG00000176998.4 HCG4 -9208 2.42e-13 -0.804017 1e-17 schizophrenia 6_29783228 rs144373461 ENSG00000230795.3 HLA-K -143950 9.92e-06 -0.524616 1e-17 schizophrenia 6_29783976 rs142425863 ENSG00000176998.4 HCG4 -8460 2.02e-17 -0.890998 5e-11 schizophrenia 6_29783976 rs142425863 ENSG00000235821.1 IFITM4P 32828 7.91e-05 -0.456743 5e-11 schizophrenia 6_29842049 rs116326873 ENSG00000176998.4 HCG4 49613 7.33e-09 -0.755497 2e-17 schizophrenia 6_29842049 rs116326873 ENSG00000230795.3 HLA-K -85129 1.05e-05 -0.594331 2e-17 schizophrenia 6_29882943 rs151267808 ENSG00000181126.13 HLA-V 91989 5.61e-05 -0.77759 1e-22 schizophrenia 6_29882943 rs151267808 ENSG00000230795.3 HLA-K -44235 5.54e-05 -0.805821 1e-22 schizophrenia 6_29882943 rs151267808 ENSG00000176998.4 HCG4 90507 4.42e-05 -0.81679 1e-22 schizophrenia 6_29931900 rs2524005 ENSG00000176998.4 HCG4 139464 2.1e-07 -0.731777 5e-07 schizophrenia 6_29955302 rs111312615 ENSG00000176998.4 HCG4 162866 3.16e-07 -0.790811 4e-12 schizophrenia 6_29955302 rs111312615 ENSG00000176998.4 HCG4 162866 3.16e-07 -0.790811 1e-11 schizophrenia 6_29972902 rs114204022 ENSG00000230795.3 HLA-K 45724 5.57e-10 -0.806691 5e-11 schizophrenia 6_29972902 rs114204022 ENSG00000281831.1 HCP5B 99119 4.03e-05 0.485472 5e-11 schizophrenia 6_29983056 rs114950038 ENSG00000176998.4 HCG4 190620 1.38e-07 -0.637274 2e-12 schizophrenia 6_29983056 rs114950038 ENSG00000235821.1 IFITM4P 231908 1.79e-06 -0.565967 2e-12 schizophrenia 6_30064745 rs8321 ENSG00000230795.3 HLA-K 137567 6.01e-05 -0.843194 8e-09 schizophrenia 6_30197496 rs2523722 ENSG00000234127.8 TRIM26 -15931 2.95e-06 0.45409 1e-16 schizophrenia 6_30197496 rs2523722 ENSG00000137411.16 VARS2 -716709 4.66e-09 -0.658512 1e-16 schizophrenia 6_30202733 rs116408368 ENSG00000137411.16 VARS2 -711472 4.66e-09 -0.658512 7e-17 schizophrenia 6_30202733 rs116408368 ENSG00000234127.8 TRIM26 -10694 2.95e-06 0.45409 7e-17 schizophrenia 6_30202733 rs116408368 ENSG00000137411.16 VARS2 -711472 4.66e-09 -0.658512 1e-21 schizophrenia 6_30202733 rs116408368 ENSG00000234127.8 TRIM26 -10694 2.95e-06 0.45409 1e-21 schizophrenia 6_30206354 rs2021722 ENSG00000137411.16 VARS2 -707851 4.66e-09 -0.658512 2e-12 schizophrenia 6_30206354 rs2021722 ENSG00000234127.8 TRIM26 -7073 2.95e-06 0.45409 2e-12 schizophrenia 6_30206354 rs2021722 ENSG00000137411.16 VARS2 -707851 4.66e-09 -0.658512 2e-12 schizophrenia 6_30206354 rs2021722 ENSG00000234127.8 TRIM26 -7073 2.95e-06 0.45409 2e-12 schizophrenia 6_30368886 rs114200269 ENSG00000230795.3 HLA-K 441708 3.13e-05 -0.857482 2e-19 schizophrenia 6_30397852 rs115687605 ENSG00000230795.3 HLA-K 470674 8.5e-06 -0.815295 2e-15 schizophrenia 6_30397852 rs115687605 ENSG00000230795.3 HLA-K 470674 8.5e-06 -0.815295 3e-13 schizophrenia 6_30598076 rs144959664 ENSG00000204632.11 HLA-G 771109 1.48e-06 -0.860616 1e-14 schizophrenia 6_30598076 rs144959664 ENSG00000204540.10 PSORS1C1 -516674 4.89e-05 -0.718752 1e-14 schizophrenia 6_30598076 rs144959664 ENSG00000230795.3 HLA-K 670898 9.28e-06 -0.843637 1e-14 schizophrenia 6_30762562 rs150430679 ENSG00000228022.5 HCG20 -4263 3.03e-05 -0.464465 3e-13 schizophrenia 6_30814428 rs114964506 ENSG00000204536.13 CCHCR1 -343810 4.93e-05 0.444977 2e-15 schizophrenia 6_30888130 rs116552815 ENSG00000137411.16 VARS2 -26075 8.94e-06 -0.447124 1e-08 schizophrenia 6_30905731 rs111782145 ENSG00000137411.16 VARS2 -8474 5.6e-05 -0.927582 2e-08 schizophrenia 6_30931418 rs114115252 ENSG00000137411.16 VARS2 17213 3.38e-05 -0.540369 8e-20 schizophrenia 6_30937536 rs114838832 ENSG00000137411.16 VARS2 23331 2.79e-08 -0.574324 2e-10 schizophrenia 6_30937536 rs114838832 ENSG00000196260.4 SFTA2 -18100 4.46e-05 -0.553173 2e-10 schizophrenia 6_30939558 rs115123027 ENSG00000137411.16 VARS2 25353 7.05e-05 -0.508447 4e-20 schizophrenia 6_30945681 rs3132581 ENSG00000137411.16 VARS2 31476 3.38e-05 -0.540369 2e-07 schizophrenia 6_30964067 rs114867672 ENSG00000204540.10 PSORS1C1 -150683 4.14e-05 -0.674164 2e-16 schizophrenia 6_31025536 rs115487448 ENSG00000204338.8 CYP21A1P -980153 9.66e-07 -0.697063 1e-09 schizophrenia 6_31135187 rs3132565 ENSG00000137411.16 VARS2 220982 4.01e-05 -0.389614 1e-09 schizophrenia 6_31137370 rs149979052 ENSG00000204338.8 CYP21A1P -868319 6.86e-07 -0.787999 7e-19 schizophrenia 6_31137370 rs149979052 ENSG00000204338.8 CYP21A1P -868319 6.86e-07 -0.787999 7e-14 schizophrenia 6_31222761 rs116067082 ENSG00000137411.16 VARS2 308556 1.34e-05 0.420841 4e-11 schizophrenia 6_31229085 rs144762289 ENSG00000204338.8 CYP21A1P -776604 1.62e-05 -0.67682 3e-17 schizophrenia 6_31245806 rs114142645 ENSG00000204528.3 PSORS1C3 67907 5.33e-07 0.667794 2e-08 schizophrenia 6_31268274 rs111977918 ENSG00000204525.16 HLA-C -3831 2.08e-08 -0.556255 2e-08 schizophrenia 6_31300843 rs114274203 ENSG00000204525.16 HLA-C 28738 3.45e-08 -0.501285 3e-12 schizophrenia 6_31345252 rs116509918 ENSG00000204338.8 CYP21A1P -660437 3e-06 -0.749669 6e-20 schizophrenia 6_31353490 rs2596500 ENSG00000204338.8 CYP21A1P -652199 3.69e-06 -0.728472 8e-20 schizophrenia 6_31383745 rs114291394 ENSG00000137411.16 VARS2 469540 9.58e-06 0.42922 2e-10 schizophrenia 6_31383745 rs114291394 ENSG00000204525.16 HLA-C 111640 1.28e-05 -0.423852 2e-10 schizophrenia 6_31474954 rs114277634 ENSG00000204525.16 HLA-C 202849 5.24e-05 -0.378782 4e-08 schizophrenia 6_31635190 rs1046089 ENSG00000204428.12 LY6G5C -48850 1.11e-05 -0.420641 4e-06 schizophrenia 6_31758911 rs707939 ENSG00000213676.10 ATF6B -369342 3.73e-12 0.564937 4e-12 schizophrenia 6_31819390 rs142536810 ENSG00000204338.8 CYP21A1P -186299 1.92e-08 -1.03334 5e-20 schizophrenia 6_31819390 rs142536810 ENSG00000244731.7 C4A -162634 1.74e-05 -0.502376 5e-20 schizophrenia 6_31894038 rs142520578 ENSG00000204525.16 HLA-C 621933 1.11e-05 -0.42633 5e-10 schizophrenia 6_31894038 rs142520578 ENSG00000204351.11 SKIV2L -65073 5.28e-07 0.383719 5e-10 schizophrenia 6_31894038 rs142520578 ENSG00000213676.10 ATF6B -234215 6.17e-07 0.399649 5e-10 schizophrenia 6_31913532 rs116385615 ENSG00000204338.8 CYP21A1P -92157 5.06e-06 -0.73422 2e-16 schizophrenia 6_31940060 rs2293751 ENSG00000213676.10 ATF6B -188193 3.63e-08 0.394984 3e-08 schizophrenia 6_31977869 rs2734325 ENSG00000204338.8 CYP21A1P -27820 1.02e-05 0.496398 3e-07 schizophrenia 6_31977869 rs2734325 ENSG00000213676.10 ATF6B -150384 1.11e-10 0.507361 3e-07 schizophrenia 6_31979683 rs389883 ENSG00000204338.8 CYP21A1P -26006 6.73e-07 0.598057 1e-12 schizophrenia 6_31979683 rs389883 ENSG00000213676.10 ATF6B -148570 2.11e-05 0.383035 1e-12 schizophrenia 6_31979683 rs389883 ENSG00000204525.16 HLA-C 707578 3.73e-05 -0.444681 1e-12 schizophrenia 6_32058086 rs369637 ENSG00000204338.8 CYP21A1P 52397 4.22e-06 -0.83129 2e-10 schizophrenia 6_32082981 rs1150754 ENSG00000204338.8 CYP21A1P 77292 4.22e-06 -0.83129 3e-12 schizophrenia 6_32103231 rs41268902 ENSG00000213676.10 ATF6B -25022 1.06e-05 0.590357 5e-06 schizophrenia 6_32238466 rs145547914 ENSG00000204338.8 CYP21A1P 232777 1.3e-06 -0.676546 3e-15 schizophrenia 6_32368989 rs115558405 ENSG00000204308.7 RNF5 190635 4.71e-06 -0.298155 2e-13 schizophrenia 6_32381780 rs115035678 ENSG00000204338.8 CYP21A1P 376091 1.72e-06 -0.825981 1e-14 schizophrenia 6_32381780 rs115035678 ENSG00000244731.7 C4A 399756 3.6e-05 -0.445826 1e-14 schizophrenia 6_32413695 rs116047537 ENSG00000198502.5 HLA-DRB5 -116592 3e-06 -0.491707 2e-09 schizophrenia 6_32597688 rs2760981 ENSG00000198502.5 HLA-DRB5 67401 2.39e-09 -0.60315 4e-11 schizophrenia 6_32614112 rs4530903 ENSG00000232629.8 HLA-DQB2 -149422 2.17e-05 -0.823726 5e-06 schizophrenia 6_32634492 rs9272219 ENSG00000232629.8 HLA-DQB2 -129042 5.09e-09 0.684119 7e-08 schizophrenia 6_32634492 rs9272219 ENSG00000179344.16 HLA-DQB1 -33891 2.83e-06 -0.470668 7e-08 schizophrenia 6_32635879 rs116139966 ENSG00000232629.8 HLA-DQB2 -127655 4.24e-09 0.672328 1e-09 schizophrenia 6_32635879 rs116139966 ENSG00000179344.16 HLA-DQB1 -32504 3.23e-06 -0.458164 1e-09 schizophrenia 6_32668221 rs9274623 ENSG00000179344.16 HLA-DQB1 -162 1.05e-05 -0.567653 6e-19 schizophrenia 6_32668836 rs147875011 ENSG00000232629.8 HLA-DQB2 -94698 1.12e-12 0.804635 3e-10 schizophrenia 6_32668836 rs147875011 ENSG00000179344.16 HLA-DQB1 453 1.16e-10 -0.620798 3e-10 schizophrenia 6_32706552 rs114771361 ENSG00000237541.3 HLA-DQA2 -34790 4.26e-06 0.521791 5e-10 schizophrenia 6_32706552 rs114771361 ENSG00000232629.8 HLA-DQB2 -56982 5.09e-06 0.516819 5e-10 schizophrenia 6_32707332 rs9275524 ENSG00000232629.8 HLA-DQB2 -56202 2.93e-05 0.509042 2e-07 schizophrenia 6_32707332 rs9275524 ENSG00000179344.16 HLA-DQB1 38949 2.79e-05 -0.425603 2e-07 schizophrenia 6_32707332 rs9275524 ENSG00000223534.1 HLA-DQB1-AS1 46977 6.35e-06 -0.481394 2e-07 schizophrenia 6_32707332 rs9275524 ENSG00000237541.3 HLA-DQA2 -34010 5.52e-08 0.644525 2e-07 schizophrenia 6_32707332 rs9275524 ENSG00000229391.7 HLA-DRB6 147310 1.89e-05 0.423849 2e-07 schizophrenia 6_32815309 rs7383287 ENSG00000232629.8 HLA-DQB2 51775 3.02e-05 0.568417 1e-07 schizophrenia 6_32936262 rs115497191 ENSG00000204248.10 COL11A2 -256237 3.53e-06 -0.587035 4e-14 schizophrenia 6_32945469 rs1480380 ENSG00000204248.10 COL11A2 -247030 3.26e-08 -0.646976 6e-07 schizophrenia 6_32946949 rs73396800 ENSG00000204248.10 COL11A2 -245550 3.53e-06 -0.587035 4e-16 schizophrenia 6_32963018 rs115325719 ENSG00000204248.10 COL11A2 -229481 4.6e-08 -0.548883 6e-11 schizophrenia 6_33227606 rs114460660 ENSG00000204248.10 COL11A2 35107 4.55e-09 -0.866039 3e-08 schizophrenia 6_33227606 rs114460660 ENSG00000204248.10 COL11A2 35107 4.55e-09 -0.866039 3e-08 schizophrenia 6_36956740 rs10947652 ENSG00000198663.16 C6orf89 84867 4.95e-07 -0.224668 5e-06 schizophrenia 6_36956740 rs10947652 ENSG00000137409.19 MTCH1 -29558 7.56e-09 -0.419289 5e-06 schizophrenia 6_36956740 rs10947652 ENSG00000198663.16 C6orf89 84867 4.95e-07 -0.224668 3e-06 schizophrenia 6_36956740 rs10947652 ENSG00000137409.19 MTCH1 -29558 7.56e-09 -0.419289 3e-06 schizophrenia 6_63416275 rs9341835 ENSG00000146166.16 LGSN 96298 6.45e-14 -0.857092 4e-06 schizophrenia 6_63657468 rs1884117 ENSG00000146166.16 LGSN 337491 8.99e-09 0.712491 5e-08 schizophrenia 6_83463309 rs12195417 ENSG00000065833.8 ME1 32238 8.8e-09 -0.339437 5e-06 schizophrenia 7_100699412 rs221780 ENSG00000146830.9 GIGYF1 9964 4.61e-06 -0.358516 1e-07 schizophrenia 7_100699412 rs221780 ENSG00000146830.9 GIGYF1 9964 4.61e-06 -0.358516 3e-07 schizophrenia 7_100699412 rs221780 ENSG00000146830.9 GIGYF1 9964 4.61e-06 -0.358516 3e-06 schizophrenia 7_100715476 rs492430 ENSG00000146830.9 GIGYF1 26028 7.12e-06 -0.351755 2e-08 schizophrenia 7_100717894 rs1734907 ENSG00000146830.9 GIGYF1 28446 7.12e-06 -0.351755 4e-06 schizophrenia 7_2189213 rs1637749 ENSG00000122687.17 MRM2 -52985 3.77e-06 0.425639 3e-10 schizophrenia 7_2238591 rs7799006 ENSG00000122687.17 MRM2 -3607 5.16e-11 0.53981 5e-06 schizophrenia 7_23871880 rs2106747 ENSG00000188732.10 FAM221A 191750 3.82e-08 -0.610563 3e-08 schizophrenia 7_23871880 rs2106747 ENSG00000196335.12 STK31 161713 3.11e-06 -0.438086 3e-08 schizophrenia 7_23876057 rs10262624 ENSG00000196335.12 STK31 165890 3.11e-06 -0.438086 2e-06 schizophrenia 7_23876057 rs10262624 ENSG00000188732.10 FAM221A 195927 3.82e-08 -0.610563 2e-06 schizophrenia 7_72115777 rs860003 ENSG00000183166.10 CALN1 -331374 1.02e-05 0.533222 8e-09 schizophrenia 7_76335026 rs2961033 ENSG00000243566.6 UPK3B -175402 9.55e-06 0.672161 5e-07 schizophrenia 7_76335026 rs2961033 ENSG00000146707.14 POMZP3 -290657 5.27e-10 -0.930881 5e-07 schizophrenia 8_142649072 rs11785400 ENSG00000182759.3 MAFA -781334 2.8e-06 0.337983 8e-07 schizophrenia 8_142657606 rs1137522 ENSG00000182759.3 MAFA -772800 8.06e-07 0.380082 5e-09 schizophrenia 8_142657606 rs1137522 ENSG00000234616.8 JRK -24314 8.3e-07 -0.347804 5e-09 schizophrenia 8_143572424 rs4873803 ENSG00000147813.15 NAPRT -5933 1.41e-10 0.677542 1e-09 schizophrenia 8_143573145 rs10866912 ENSG00000147813.15 NAPRT -5212 4.75e-10 0.678736 4e-08 schizophrenia 8_38173827 rs16887244 ENSG00000085788.13 DDHD2 -51391 2.43e-06 0.306772 1e-10 schizophrenia 8_38277894 rs7845911 ENSG00000085788.13 DDHD2 52676 2.71e-05 0.297297 8e-09 schizophrenia 8_38351611 rs10156310 ENSG00000085788.13 DDHD2 126393 2.46e-06 0.328932 6e-10 schizophrenia 8_38390788 rs112537273 ENSG00000085788.13 DDHD2 165570 3.08e-06 0.3253 2e-07 schizophrenia 8_38390788 rs112537273 ENSG00000085788.13 DDHD2 165570 3.08e-06 0.3253 1e-06 schizophrenia 8_38390788 rs112537273 ENSG00000085788.13 DDHD2 165570 3.08e-06 0.3253 1e-11 schizophrenia 8_38390788 rs112537273 ENSG00000085788.13 DDHD2 165570 3.08e-06 0.3253 1e-12 schizophrenia 8_38401963 rs11986274 ENSG00000085788.13 DDHD2 176745 8.91e-06 0.301471 1e-08 schizophrenia 8_38415064 rs4647903 ENSG00000085788.13 DDHD2 189846 5.64e-06 0.326736 2e-09 schizophrenia 8_38415064 rs4647903 ENSG00000085788.13 DDHD2 189846 5.64e-06 0.326736 4e-08 schizophrenia 8_8234503 rs2980436 ENSG00000253893.2 FAM85B 7889 2.43e-14 -0.918493 4e-07 schizophrenia 8_8234503 rs2980436 ENSG00000253893.2 FAM85B 7889 2.43e-14 -0.918493 2e-08 schizophrenia 8_8234883 rs1878561 ENSG00000253893.2 FAM85B 8269 3.64e-13 -0.864738 1e-07 schizophrenia 8_8234883 rs1878561 ENSG00000173295.7 FAM86B3P 6288 1.84e-05 -0.382319 1e-07 schizophrenia 8_8240516 rs2945232 ENSG00000253893.2 FAM85B 13902 5.06e-16 -0.942751 2e-08 schizophrenia 8_8517326 rs12546760 ENSG00000253893.2 FAM85B 290712 1.04e-09 -0.702489 4e-08 schizophrenia 8_9176638 rs367543 ENSG00000253893.2 FAM85B 950024 7.79e-06 -0.593818 8e-06 schizophrenia 9_83814390 rs295268 ENSG00000178966.16 RMI1 -166321 8.65e-06 -0.371205 6e-10 schizophrenia X_153942092 rs2269372 ENSG00000177854.7 TMEM187 -30235 5.21e-07 -0.433248 4e-08