DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE schizophrenia 10_100152437 rs1408579 ENSG00000095485.16 CWF19L1 -115243 1.72e-06 0.653567 2e-08 schizophrenia 10_102666420 rs4244354 ENSG00000138175.8 ARL3 -47987 6.52e-06 -0.760311 2e-09 schizophrenia 11_130848816 rs10791098 ENSG00000120451.10 SNX19 -67693 6.04e-07 -0.616107 2e-12 schizophrenia 11_130848918 rs10791099 ENSG00000120451.10 SNX19 -67591 6.04e-07 -0.616107 1e-08 schizophrenia 11_130849166 rs10750450 ENSG00000120451.10 SNX19 -67343 6.04e-07 -0.616107 7e-13 schizophrenia 11_130861542 rs73022874 ENSG00000120451.10 SNX19 -54967 1.81e-11 0.797868 5e-10 schizophrenia 12_56055651 rs7302200 ENSG00000197728.9 RPS26 13798 4.45e-12 0.873612 1e-14 schizophrenia 14_22912771 rs9989230 ENSG00000092036.18 HAUS4 -44390 4.91e-08 -0.753511 4e-12 schizophrenia 15_82558175 rs17507216 ENSG00000278662.4 GOLGA6L10 208700 3.93e-07 -0.900938 4e-10 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 9.91e-08 -0.90979 2e-11 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 9.91e-08 -0.90979 3e-11 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 9.91e-08 -0.90979 2e-11 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 9.91e-08 -0.90979 1e-10 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 9.91e-08 -0.90979 5e-12 schizophrenia 15_84137308 rs66486766 ENSG00000225151.10 GOLGA2P7 -92828 4.4e-08 -0.924845 5e-11 schizophrenia 15_84137308 rs66486766 ENSG00000225151.10 GOLGA2P7 -92828 4.4e-08 -0.924845 1e-11 schizophrenia 15_84562751 rs12902973 ENSG00000225151.10 GOLGA2P7 332615 1.02e-07 -0.861234 4e-10 schizophrenia 15_84562751 rs12902973 ENSG00000225151.10 GOLGA2P7 332615 1.02e-07 -0.861234 9e-11 schizophrenia 15_84581411 rs11633534 ENSG00000225151.10 GOLGA2P7 351275 5.12e-08 -0.847662 8e-14 schizophrenia 15_84594463 rs11638445 ENSG00000259295.6 CSPG4P12 -596975 6.2e-06 0.76616 3e-10 schizophrenia 15_84594463 rs11638445 ENSG00000225151.10 GOLGA2P7 364327 1.23e-06 -0.799515 3e-10 schizophrenia 15_84606344 rs748455 ENSG00000197696.9 NMB -52219 1.35e-05 -0.456738 6e-13 schizophrenia 15_84664594 rs12908161 ENSG00000197696.9 NMB 6031 2.81e-06 -0.472599 5e-10 schizophrenia 15_84664594 rs12908161 ENSG00000197696.9 NMB 6031 2.81e-06 -0.472599 9e-10 schizophrenia 15_84806000 rs35630683 ENSG00000197696.9 NMB 147437 7.7e-06 -0.452604 5e-09 schizophrenia 15_84812610 rs35828350 ENSG00000197696.9 NMB 154047 7.7e-06 -0.452604 6e-11 schizophrenia 16_11983775 rs12922317 ENSG00000234719.8 NPIPB2 7132 3.66e-09 0.876244 9e-07 schizophrenia 16_29954956 rs11646127 ENSG00000169592.14 INO80E -40338 6.42e-06 -0.630411 6e-13 schizophrenia 16_68289751 rs55757091 ENSG00000132600.16 PRMT7 -21223 3.92e-07 0.650366 5e-07 schizophrenia 16_68289751 rs55757091 ENSG00000132600.16 PRMT7 -21223 3.92e-07 0.650366 3e-07 schizophrenia 16_68289751 rs55757091 ENSG00000132600.16 PRMT7 -21223 3.92e-07 0.650366 2e-07 schizophrenia 16_68310460 rs8063446 ENSG00000132600.16 PRMT7 -514 2.6e-06 0.807746 3e-06 schizophrenia 16_69940756 rs3748386 ENSG00000255185.5 PDXDC2P -125189 2e-06 0.578984 6e-09 schizophrenia 17_12993236 rs9908102 ENSG00000006744.18 ELAC2 -24951 2.01e-07 0.334694 2e-06 schizophrenia 17_2221430 rs2131700 ENSG00000167720.12 SRR -81953 9.86e-07 -0.684719 2e-08 schizophrenia 17_45666978 rs1635298 ENSG00000262500.1 MAPK8IP1P1 -576628 6.65e-10 -0.873147 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000214401.4 KANSL1-AS1 -526598 9.89e-11 -0.863495 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000264070.1 DND1P1 81107 1.83e-09 -0.993878 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000214425.7 LRRC37A4P 116643 3.19e-14 1.03507 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000238083.7 LRRC37A2 -844533 7.03e-09 -0.798575 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000204650.14 LINC02210 46650 7.04e-14 -0.976179 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000263503.1 MAPK8IP1P2 64638 1.79e-10 -0.915284 3e-08 schizophrenia 17_45779092 rs35076622 ENSG00000214425.7 LRRC37A4P 228757 1.05e-08 -0.954387 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000263503.1 MAPK8IP1P2 176752 7.81e-07 0.837689 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000262500.1 MAPK8IP1P1 -464514 1.32e-06 0.802776 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000214401.4 KANSL1-AS1 -414484 1.6e-06 0.765893 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000264070.1 DND1P1 193221 4.02e-06 0.895679 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000204650.14 LINC02210 158764 8.65e-08 0.864528 3e-12 schizophrenia 17_46784796 rs199503 ENSG00000262500.1 MAPK8IP1P1 541190 1.41e-11 1.0111 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000214401.4 KANSL1-AS1 591220 4.14e-17 1.08689 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000238083.7 LRRC37A2 273285 1.69e-12 0.990181 3e-09 schizophrenia 18_12947463 rs3809912 ENSG00000101639.18 CEP192 -43899 6.43e-18 -0.965917 1e-08 schizophrenia 22_42141587 rs1800754 ENSG00000100197.20 CYP2D6 10681 9.28e-10 1.03833 2e-15 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 5.69e-06 -0.95127 1e-11 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 5.69e-06 -0.95127 3e-08 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 5.69e-06 -0.95127 1e-10 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 5.69e-06 -0.95127 1e-08 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 5.69e-06 -0.95127 5e-09 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 3.95e-08 -0.945334 2e-09 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 3.95e-08 -0.945334 6e-10 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 3.95e-08 -0.945334 2e-09 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 3.95e-08 -0.945334 2e-14 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 3.95e-08 -0.945334 1e-09 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 3.95e-08 -0.945334 1e-08 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 3.95e-08 -0.945334 5e-10 schizophrenia 3_50002761 rs4688756 ENSG00000004534.14 RBM6 62754 1.33e-07 -0.494239 2e-17 schizophrenia 6_26478024 rs34104395 ENSG00000186470.13 BTN3A2 112865 1.95e-05 -0.856984 9e-20 schizophrenia 6_28195002 rs1150688 ENSG00000197062.11 ZSCAN26 -72008 2.31e-06 -0.457683 8e-11 schizophrenia 6_29638984 rs138488080 ENSG00000204644.9 ZFP57 -42126 1.24e-07 1.33459 3e-16 schizophrenia 6_29639270 rs114041423 ENSG00000204644.9 ZFP57 -41840 3.49e-11 1.35362 1e-15 schizophrenia 6_29660317 rs143363269 ENSG00000204644.9 ZFP57 -20793 3.49e-11 1.35362 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000204644.9 ZFP57 -20793 3.49e-11 1.35362 1e-10 schizophrenia 6_29681770 rs385492 ENSG00000239257.1 RPL23AP1 -45112 1.02e-05 0.552179 1e-08 schizophrenia 6_29681770 rs385492 ENSG00000239257.1 RPL23AP1 -45112 1.02e-05 0.552179 4e-09 schizophrenia 6_29783228 rs144373461 ENSG00000176998.4 HCG4 -9208 1.99e-05 -0.787965 6e-16 schizophrenia 6_29783228 rs144373461 ENSG00000176998.4 HCG4 -9208 1.99e-05 -0.787965 2e-17 schizophrenia 6_29783228 rs144373461 ENSG00000176998.4 HCG4 -9208 1.99e-05 -0.787965 1e-17 schizophrenia 6_29783976 rs142425863 ENSG00000176998.4 HCG4 -8460 1.72e-05 -0.785568 5e-11 schizophrenia 6_30937536 rs114838832 ENSG00000137411.16 VARS2 23331 9.92e-07 -0.521865 2e-10 schizophrenia 6_31268274 rs111977918 ENSG00000204525.16 HLA-C -3831 1.49e-05 -0.693448 2e-08 schizophrenia 6_31345252 rs116509918 ENSG00000244731.7 C4A -636772 4.31e-06 -0.93433 6e-20 schizophrenia 6_31353490 rs2596500 ENSG00000244731.7 C4A -628534 4.31e-06 -0.93433 8e-20 schizophrenia 6_31361514 rs139099016 ENSG00000204520.12 MICA -38270 6.67e-06 0.675636 4e-09 schizophrenia 6_31819390 rs142536810 ENSG00000204338.8 CYP21A1P -186299 2.97e-06 -0.840517 5e-20 schizophrenia 6_31819390 rs142536810 ENSG00000244731.7 C4A -162634 1.54e-11 -0.989753 5e-20 schizophrenia 6_31858928 rs67682613 ENSG00000244731.7 C4A -123096 1.63e-07 -0.766359 7e-19 schizophrenia 6_31913532 rs116385615 ENSG00000244731.7 C4A -68492 1.13e-06 -0.725548 2e-16 schizophrenia 6_31979683 rs389883 ENSG00000204338.8 CYP21A1P -26006 4.28e-06 0.647208 1e-12 schizophrenia 6_32058086 rs369637 ENSG00000244731.7 C4A 76062 8.92e-06 -0.634138 2e-10 schizophrenia 6_32082981 rs1150754 ENSG00000244731.7 C4A 100957 8.92e-06 -0.634138 3e-12 schizophrenia 6_32147408 rs145076523 ENSG00000244731.7 C4A 165384 4.38e-09 -0.8694 5e-13 schizophrenia 6_32197667 rs115344853 ENSG00000244731.7 C4A 215643 8.29e-07 -0.675146 2e-17 schizophrenia 6_32197667 rs115344853 ENSG00000244731.7 C4A 215643 8.29e-07 -0.675146 4e-14 schizophrenia 6_32203298 rs3132935 ENSG00000244731.7 C4A 221274 1.59e-06 -0.66341 5e-07 schizophrenia 6_32203298 rs3132935 ENSG00000244731.7 C4A 221274 1.59e-06 -0.66341 3e-07 schizophrenia 6_32205216 rs3131296 ENSG00000244731.7 C4A 223192 3e-09 -0.83829 2e-10 schizophrenia 6_32317765 rs114473235 ENSG00000198502.5 HLA-DRB5 -212522 4.85e-06 -0.823525 8e-07 schizophrenia 6_32381780 rs115035678 ENSG00000204338.8 CYP21A1P 376091 9.23e-06 -0.771495 1e-14 schizophrenia 6_32381780 rs115035678 ENSG00000244731.7 C4A 399756 1.31e-09 -0.886133 1e-14 schizophrenia 6_32534622 rs180778602 ENSG00000244731.7 C4A 552598 3.04e-08 -0.804558 4e-12 schizophrenia 6_32597688 rs2760981 ENSG00000198502.5 HLA-DRB5 67401 3.87e-06 -0.826878 4e-11 schizophrenia 6_32668221 rs9274623 ENSG00000244731.7 C4A 686197 1.07e-05 -0.536026 6e-19 schizophrenia 6_32668836 rs147875011 ENSG00000232629.8 HLA-DQB2 -94698 3.98e-07 0.742097 3e-10 schizophrenia 6_32668836 rs147875011 ENSG00000179344.16 HLA-DQB1 453 1.57e-07 -0.667384 3e-10 schizophrenia 6_32707332 rs9275524 ENSG00000237541.3 HLA-DQA2 -34010 1.1e-05 0.62347 2e-07 schizophrenia 6_32936262 rs115497191 ENSG00000244731.7 C4A 954238 1.03e-08 -1.01923 4e-14 schizophrenia 6_32945469 rs1480380 ENSG00000204338.8 CYP21A1P 939780 8.05e-06 -0.875638 6e-07 schizophrenia 6_32945469 rs1480380 ENSG00000244731.7 C4A 963445 3.82e-07 -0.881789 6e-07 schizophrenia 6_32946949 rs73396800 ENSG00000244731.7 C4A 964925 1.03e-08 -1.01923 4e-16 schizophrenia 6_32963018 rs115325719 ENSG00000244731.7 C4A 980994 7.34e-06 -0.680181 6e-11 schizophrenia 6_32963018 rs115325719 ENSG00000204338.8 CYP21A1P 957329 1.01e-05 -0.737485 6e-11 schizophrenia 8_143572424 rs4873803 ENSG00000147813.15 NAPRT -5933 7.1e-10 0.621044 1e-09 schizophrenia 8_143573145 rs10866912 ENSG00000147813.15 NAPRT -5212 2.3e-09 0.592425 4e-08 schizophrenia 8_8234503 rs2980436 ENSG00000173295.7 FAM86B3P 5908 3.55e-08 0.750246 4e-07 schizophrenia 8_8234503 rs2980436 ENSG00000173295.7 FAM86B3P 5908 3.55e-08 0.750246 2e-08 schizophrenia 8_8234883 rs1878561 ENSG00000253981.5 ALG1L13P -9157 6.14e-06 0.608051 1e-07 schizophrenia 8_8240516 rs2945232 ENSG00000173295.7 FAM86B3P 11921 2.19e-09 0.752119 2e-08 schizophrenia 8_8240516 rs2945232 ENSG00000253981.5 ALG1L13P -3524 5.02e-07 0.695441 2e-08 schizophrenia 8_8517326 rs12546760 ENSG00000173295.7 FAM86B3P 288731 4.21e-06 0.613746 4e-08 schizophrenia 9_22767165 rs505061 ENSG00000234840.1 LINC01239 120965 2e-07 -0.71317 5e-09 schizophrenia 9_22767165 rs505061 ENSG00000234840.1 LINC01239 120965 2e-07 -0.71317 2e-09