DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE schizophrenia 1_109354481 rs11142 ENSG00000143028.8 SYPL2 -112147 2.63e-07 -0.446135 7e-06 schizophrenia 1_109354481 rs11142 ENSG00000143028.8 SYPL2 -112147 2.63e-07 -0.446135 7e-06 schizophrenia 1_109498058 rs2297797 ENSG00000181754.6 AMIGO1 -11680 3.2e-06 -0.270645 3e-08 schizophrenia 1_147611315 rs583583 ENSG00000162836.11 ACP6 -59181 1.93e-09 0.501517 6e-07 schizophrenia 1_173677634 rs61826793 ENSG00000117601.13 SERPINC1 -239744 2.18e-05 0.74235 4e-08 schizophrenia 1_174046121 rs6701877 ENSG00000117601.13 SERPINC1 128743 6.69e-05 0.563565 6e-10 schizophrenia 1_174046121 rs6701877 ENSG00000152061.23 RABGAP1L -113289 2.29e-05 0.392124 6e-10 schizophrenia 1_174046123 rs61826828 ENSG00000117601.13 SERPINC1 128745 6.69e-05 0.563565 9e-06 schizophrenia 1_174046123 rs61826828 ENSG00000152061.23 RABGAP1L -113287 2.29e-05 0.392124 9e-06 schizophrenia 1_200982179 rs72749142 ENSG00000116852.14 KIF21B -41521 3.61e-06 0.430712 3e-06 schizophrenia 1_200991179 rs2297909 ENSG00000116852.14 KIF21B -32521 4.46e-06 0.333048 2e-06 schizophrenia 1_22103576 rs2143103 ENSG00000218510.6 LINC00339 79045 1.42e-08 0.669993 3e-09 schizophrenia 10_100152437 rs1408579 ENSG00000095485.16 CWF19L1 -115243 7.61e-06 0.4908 2e-08 schizophrenia 10_102852578 rs11191419 ENSG00000214435.7 AS3MT -16938 1.37e-12 -0.558897 3e-18 schizophrenia 10_102852578 rs11191419 ENSG00000166275.15 BORCS7 -1645 6.12e-09 -0.465886 3e-18 schizophrenia 10_102852578 rs11191419 ENSG00000214435.7 AS3MT -16938 1.37e-12 -0.558897 6e-19 schizophrenia 10_102852578 rs11191419 ENSG00000166275.15 BORCS7 -1645 6.12e-09 -0.465886 6e-19 schizophrenia 10_102852578 rs11191419 ENSG00000214435.7 AS3MT -16938 1.37e-12 -0.558897 1e-16 schizophrenia 10_102852578 rs11191419 ENSG00000166275.15 BORCS7 -1645 6.12e-09 -0.465886 1e-16 schizophrenia 10_102866129 rs11191424 ENSG00000166275.15 BORCS7 11906 3.69e-08 -0.442497 3e-16 schizophrenia 10_102866129 rs11191424 ENSG00000214435.7 AS3MT -3387 4.55e-13 -0.566103 3e-16 schizophrenia 10_102866129 rs11191424 ENSG00000166275.15 BORCS7 11906 3.69e-08 -0.442497 4e-20 schizophrenia 10_102866129 rs11191424 ENSG00000214435.7 AS3MT -3387 4.55e-13 -0.566103 4e-20 schizophrenia 10_102900247 rs11191454 ENSG00000213277.3 MARCKSL1P1 -275307 5.02e-08 0.982607 1e-08 schizophrenia 10_102989968 rs10883816 ENSG00000166275.15 BORCS7 135745 1.39e-06 -0.396997 4e-11 schizophrenia 10_102989968 rs10883816 ENSG00000214435.7 AS3MT 120452 2.98e-08 -0.456654 4e-11 schizophrenia 10_103004514 rs11191499 ENSG00000213277.3 MARCKSL1P1 -171040 3.51e-08 0.962168 1e-09 schizophrenia 10_103016151 rs7914558 ENSG00000166275.15 BORCS7 161928 1.61e-07 -0.408412 2e-09 schizophrenia 10_103016151 rs7914558 ENSG00000214435.7 AS3MT 146635 2.97e-11 -0.509469 2e-09 schizophrenia 10_103016151 rs7914558 ENSG00000166275.15 BORCS7 161928 1.61e-07 -0.408412 2e-08 schizophrenia 10_103016151 rs7914558 ENSG00000214435.7 AS3MT 146635 2.97e-11 -0.509469 2e-08 schizophrenia 10_103033891 rs75970938 ENSG00000213277.3 MARCKSL1P1 -141663 9.57e-08 0.952771 2e-25 schizophrenia 10_103089359 rs10786736 ENSG00000213277.3 MARCKSL1P1 -86195 1.39e-07 0.834663 5e-11 schizophrenia 10_103089359 rs10786736 ENSG00000213277.3 MARCKSL1P1 -86195 1.39e-07 0.834663 8e-12 schizophrenia 10_103089359 rs10786736 ENSG00000213277.3 MARCKSL1P1 -86195 1.39e-07 0.834663 4e-17 schizophrenia 10_103111522 rs10883832 ENSG00000213277.3 MARCKSL1P1 -64032 9.57e-08 0.952771 3e-14 schizophrenia 10_103111522 rs10883832 ENSG00000213277.3 MARCKSL1P1 -64032 9.57e-08 0.952771 2e-16 schizophrenia 10_103146454 rs11191580 ENSG00000213277.3 MARCKSL1P1 -29100 9.57e-08 0.952771 2e-09 schizophrenia 10_103146454 rs11191580 ENSG00000213277.3 MARCKSL1P1 -29100 9.57e-08 0.952771 3e-08 schizophrenia 10_103146454 rs11191580 ENSG00000213277.3 MARCKSL1P1 -29100 9.57e-08 0.952771 1e-08 schizophrenia 10_103153896 rs11191582 ENSG00000213277.3 MARCKSL1P1 -21658 9.57e-08 0.952771 4e-14 schizophrenia 10_103153896 rs11191582 ENSG00000213277.3 MARCKSL1P1 -21658 9.57e-08 0.952771 3e-17 schizophrenia 10_103169157 rs12416331 ENSG00000213277.3 MARCKSL1P1 -6397 9.57e-08 0.952771 7e-18 schizophrenia 10_103192742 rs79780963 ENSG00000213277.3 MARCKSL1P1 17188 9.57e-08 0.952771 3e-14 schizophrenia 10_103192742 rs79780963 ENSG00000213277.3 MARCKSL1P1 17188 9.57e-08 0.952771 3e-14 schizophrenia 10_103300139 rs11191648 ENSG00000213277.3 MARCKSL1P1 124585 1.2e-05 0.859027 5e-09 schizophrenia 11_130848816 rs10791098 ENSG00000120451.10 SNX19 -67693 9.14e-08 -0.476072 2e-12 schizophrenia 11_130848918 rs10791099 ENSG00000120451.10 SNX19 -67591 9.14e-08 -0.476072 1e-08 schizophrenia 11_130849166 rs10750450 ENSG00000120451.10 SNX19 -67343 9.14e-08 -0.476072 7e-13 schizophrenia 11_130861542 rs73022874 ENSG00000120451.10 SNX19 -54967 6.92e-31 1.04241 5e-10 schizophrenia 11_30245491 rs515997 ENSG00000152219.4 ARL14EP -77560 1.33e-05 0.327577 3e-09 schizophrenia 11_30357012 rs1765142 ENSG00000152219.4 ARL14EP 33961 4.1e-05 0.310583 2e-06 schizophrenia 11_45308670 rs11038391 ENSG00000019505.7 SYT13 22351 2.84e-08 0.394134 8e-09 schizophrenia 11_8877853 rs2455601 ENSG00000254860.5 TMEM9B-AS1 -86921 4.54e-06 -0.535482 7e-06 schizophrenia 12_122852242 rs10744422 ENSG00000130787.13 HIP1R 16816 1.01e-09 -0.375839 5e-06 schizophrenia 12_122852242 rs10744422 ENSG00000130787.13 HIP1R 16816 1.01e-09 -0.375839 6e-07 schizophrenia 12_123165788 rs1615350 ENSG00000150967.17 ABCB9 184218 7.96e-06 -0.352181 6e-18 schizophrenia 12_123165788 rs1615350 ENSG00000150967.17 ABCB9 184218 7.96e-06 -0.352181 1e-25 schizophrenia 12_123165788 rs1615350 ENSG00000150967.17 ABCB9 184218 7.96e-06 -0.352181 1e-17 schizophrenia 12_123165788 rs1615350 ENSG00000150967.17 ABCB9 184218 7.96e-06 -0.352181 5e-10 schizophrenia 12_123165788 rs1615350 ENSG00000150967.17 ABCB9 184218 7.96e-06 -0.352181 4e-12 schizophrenia 12_123180566 rs2851447 ENSG00000150967.17 ABCB9 198996 2.96e-05 -0.324986 8e-12 schizophrenia 12_123180566 rs2851447 ENSG00000150967.17 ABCB9 198996 2.96e-05 -0.324986 6e-16 schizophrenia 12_123180566 rs2851447 ENSG00000150967.17 ABCB9 198996 2.96e-05 -0.324986 2e-14 schizophrenia 12_123180566 rs2851447 ENSG00000150967.17 ABCB9 198996 2.96e-05 -0.324986 1e-09 schizophrenia 12_123180566 rs2851447 ENSG00000150967.17 ABCB9 198996 2.96e-05 -0.324986 1e-09 schizophrenia 12_123184688 rs1790135 ENSG00000150967.17 ABCB9 203118 1.29e-05 -0.344483 2e-09 schizophrenia 12_123192216 rs2102949 ENSG00000150967.17 ABCB9 210646 1.29e-05 -0.344483 2e-11 schizophrenia 12_123192216 rs2102949 ENSG00000150967.17 ABCB9 210646 1.29e-05 -0.344483 1e-12 schizophrenia 12_123192216 rs2102949 ENSG00000150967.17 ABCB9 210646 1.29e-05 -0.344483 2e-14 schizophrenia 12_123192216 rs2102949 ENSG00000150967.17 ABCB9 210646 1.29e-05 -0.344483 2e-13 schizophrenia 12_123197534 rs1716180 ENSG00000150967.17 ABCB9 215964 1.29e-05 -0.344483 2e-23 schizophrenia 12_123246876 rs11532322 ENSG00000150967.17 ABCB9 265306 2.23e-05 -0.336671 2e-08 schizophrenia 12_56055651 rs7302200 ENSG00000197728.9 RPS26 13798 2.89e-22 0.955682 1e-14 schizophrenia 12_56055651 rs7302200 ENSG00000139531.12 SUOX 58471 4.88e-06 -0.390699 1e-14 schizophrenia 13_44132132 rs9595066 ENSG00000227258.5 SMIM2-AS1 21681 7.99e-11 -0.779357 1e-08 schizophrenia 13_44132132 rs9595066 ENSG00000227258.5 SMIM2-AS1 21681 7.99e-11 -0.779357 4e-06 schizophrenia 13_79285321 rs9545047 ENSG00000227676.3 LINC01068 -281406 7.81e-12 0.654275 3e-06 schizophrenia 14_103345983 rs12432904 ENSG00000259775.1 EIF5-DT 13616 4.55e-06 0.397861 4e-06 schizophrenia 14_22912771 rs9989230 ENSG00000092036.18 HAUS4 -44390 7.91e-11 -0.542738 4e-12 schizophrenia 14_35069925 rs79403677 ENSG00000092020.10 PPP2R3C -52592 8.09e-09 0.524869 2e-08 schizophrenia 14_35150610 rs11156875 ENSG00000092020.10 PPP2R3C 28093 3.17e-06 0.413278 3e-07 schizophrenia 14_59498575 rs111803315 ENSG00000050130.17 JKAMP 14132 2.08e-07 0.670972 3e-06 schizophrenia 14_70894697 rs989501 ENSG00000100731.15 PCNX1 -12708 2.99e-08 0.39981 1e-11 schizophrenia 14_70907985 rs2526882 ENSG00000100731.15 PCNX1 580 1.73e-07 0.37697 1e-06 schizophrenia 14_70907985 rs2526882 ENSG00000100731.15 PCNX1 580 1.73e-07 0.37697 2e-07 schizophrenia 14_70921681 rs2189806 ENSG00000100731.15 PCNX1 14276 1.04e-07 0.402946 5e-10 schizophrenia 14_71134362 rs221902 ENSG00000100731.15 PCNX1 226957 2.72e-06 0.360974 4e-08 schizophrenia 15_43965756 rs2957582 ENSG00000223572.9 CKMT1A 272870 2.12e-05 -0.306882 2e-08 schizophrenia 15_82558175 rs17507216 ENSG00000103723.12 AP3B2 -151739 1.39e-10 0.580875 4e-10 schizophrenia 15_82558175 rs17507216 ENSG00000278662.4 GOLGA6L10 208700 1.44e-19 -1.02585 4e-10 schizophrenia 15_82558175 rs17507216 ENSG00000197978.9 GOLGA6L9 128155 1.37e-09 0.586866 4e-10 schizophrenia 15_84037709 rs950169 ENSG00000259511.2 UBE2Q2L -134781 1.13e-05 -0.618839 2e-11 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 5.88e-11 -0.733944 2e-11 schizophrenia 15_84037709 rs950169 ENSG00000259728.5 LINC00933 -533215 3.02e-07 0.519977 2e-11 schizophrenia 15_84037709 rs950169 ENSG00000259511.2 UBE2Q2L -134781 1.13e-05 -0.618839 3e-11 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 5.88e-11 -0.733944 3e-11 schizophrenia 15_84037709 rs950169 ENSG00000259728.5 LINC00933 -533215 3.02e-07 0.519977 3e-11 schizophrenia 15_84037709 rs950169 ENSG00000259511.2 UBE2Q2L -134781 1.13e-05 -0.618839 2e-11 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 5.88e-11 -0.733944 2e-11 schizophrenia 15_84037709 rs950169 ENSG00000259728.5 LINC00933 -533215 3.02e-07 0.519977 2e-11 schizophrenia 15_84037709 rs950169 ENSG00000259511.2 UBE2Q2L -134781 1.13e-05 -0.618839 1e-10 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 5.88e-11 -0.733944 1e-10 schizophrenia 15_84037709 rs950169 ENSG00000259728.5 LINC00933 -533215 3.02e-07 0.519977 1e-10 schizophrenia 15_84037709 rs950169 ENSG00000259511.2 UBE2Q2L -134781 1.13e-05 -0.618839 5e-12 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 5.88e-11 -0.733944 5e-12 schizophrenia 15_84037709 rs950169 ENSG00000259728.5 LINC00933 -533215 3.02e-07 0.519977 5e-12 schizophrenia 15_84137308 rs66486766 ENSG00000225151.10 GOLGA2P7 -92828 5.88e-11 -0.733944 5e-11 schizophrenia 15_84137308 rs66486766 ENSG00000259728.5 LINC00933 -433616 3.02e-07 0.519977 5e-11 schizophrenia 15_84137308 rs66486766 ENSG00000259511.2 UBE2Q2L -35182 1.13e-05 -0.618839 5e-11 schizophrenia 15_84137308 rs66486766 ENSG00000225151.10 GOLGA2P7 -92828 5.88e-11 -0.733944 1e-11 schizophrenia 15_84137308 rs66486766 ENSG00000259728.5 LINC00933 -433616 3.02e-07 0.519977 1e-11 schizophrenia 15_84137308 rs66486766 ENSG00000259511.2 UBE2Q2L -35182 1.13e-05 -0.618839 1e-11 schizophrenia 15_84562751 rs12902973 ENSG00000259728.5 LINC00933 -8173 1e-07 0.525061 4e-10 schizophrenia 15_84562751 rs12902973 ENSG00000259511.2 UBE2Q2L 390261 8.52e-07 -0.66985 4e-10 schizophrenia 15_84562751 rs12902973 ENSG00000225151.10 GOLGA2P7 332615 8.6e-12 -0.740993 4e-10 schizophrenia 15_84562751 rs12902973 ENSG00000259728.5 LINC00933 -8173 1e-07 0.525061 9e-11 schizophrenia 15_84562751 rs12902973 ENSG00000259511.2 UBE2Q2L 390261 8.52e-07 -0.66985 9e-11 schizophrenia 15_84562751 rs12902973 ENSG00000225151.10 GOLGA2P7 332615 8.6e-12 -0.740993 9e-11 schizophrenia 15_84581411 rs11633534 ENSG00000259511.2 UBE2Q2L 408921 1.65e-06 -0.666335 8e-14 schizophrenia 15_84581411 rs11633534 ENSG00000259728.5 LINC00933 10487 4.14e-07 0.511536 8e-14 schizophrenia 15_84581411 rs11633534 ENSG00000225151.10 GOLGA2P7 351275 1.1e-10 -0.720798 8e-14 schizophrenia 15_84594463 rs11638445 ENSG00000259728.5 LINC00933 23539 1.32e-06 0.485863 3e-10 schizophrenia 15_84594463 rs11638445 ENSG00000225151.10 GOLGA2P7 364327 5.72e-11 -0.722391 3e-10 schizophrenia 15_84606344 rs748455 ENSG00000259728.5 LINC00933 35420 9.8e-07 0.480249 6e-13 schizophrenia 15_84606344 rs748455 ENSG00000225151.10 GOLGA2P7 376208 5.77e-08 -0.600999 6e-13 schizophrenia 15_84664594 rs12908161 ENSG00000225151.10 GOLGA2P7 434458 7.54e-06 -0.555463 9e-10 schizophrenia 15_84664594 rs12908161 ENSG00000225151.10 GOLGA2P7 434458 7.54e-06 -0.555463 5e-10 schizophrenia 15_84806000 rs35630683 ENSG00000225151.10 GOLGA2P7 575864 7.54e-06 -0.555463 5e-09 schizophrenia 15_84812610 rs35828350 ENSG00000225151.10 GOLGA2P7 582474 7.54e-06 -0.555463 6e-11 schizophrenia 16_11983775 rs12922317 ENSG00000234719.8 NPIPB2 7132 2.11e-20 1.02161 9e-07 schizophrenia 16_15062041 rs2966157 ENSG00000183426.16 NPIPA1 124627 1.67e-05 -0.50238 6e-11 schizophrenia 16_15062041 rs2966157 ENSG00000188599.17 NPIPP1 -61457 4.16e-09 -0.575766 6e-11 schizophrenia 16_15062041 rs2966157 ENSG00000255277.3 ABCC6P2 237339 6.17e-06 0.421443 6e-11 schizophrenia 16_15062041 rs2966157 ENSG00000183793.13 NPIPA5 -319006 3.24e-06 0.558602 6e-11 schizophrenia 16_20663170 rs151222 ENSG00000166743.9 ACSM1 -35720 2.15e-05 0.595331 6e-06 schizophrenia 16_20668884 rs433598 ENSG00000166743.9 ACSM1 -30006 1.09e-10 0.485521 3e-06 schizophrenia 16_23629146 rs249954 ENSG00000166847.9 DCTN5 -12246 5.85e-11 0.448005 2e-06 schizophrenia 16_28874338 rs7359397 ENSG00000259982.1 CDC37P1 172798 5.26e-08 0.615039 7e-11 schizophrenia 16_29928556 rs12691307 ENSG00000102882.11 MAPK3 -194950 2.42e-06 -0.187444 5e-10 schizophrenia 16_29928556 rs12691307 ENSG00000102882.11 MAPK3 -194950 2.42e-06 -0.187444 4e-10 schizophrenia 16_29928556 rs12691307 ENSG00000102882.11 MAPK3 -194950 2.42e-06 -0.187444 2e-10 schizophrenia 16_29928556 rs12691307 ENSG00000102882.11 MAPK3 -194950 2.42e-06 -0.187444 2e-10 schizophrenia 16_29928556 rs12691307 ENSG00000102882.11 MAPK3 -194950 2.42e-06 -0.187444 5e-11 schizophrenia 16_29946895 rs8054556 ENSG00000169592.14 INO80E -48399 4.96e-09 -0.402976 4e-10 schizophrenia 16_29946895 rs8054556 ENSG00000090238.11 YPEL3 -149349 2.31e-07 0.320307 4e-10 schizophrenia 16_29946895 rs8054556 ENSG00000169592.14 INO80E -48399 4.96e-09 -0.402976 4e-11 schizophrenia 16_29946895 rs8054556 ENSG00000090238.11 YPEL3 -149349 2.31e-07 0.320307 4e-11 schizophrenia 16_29954956 rs11646127 ENSG00000169592.14 INO80E -40338 7.24e-09 -0.392896 6e-13 schizophrenia 16_29954956 rs11646127 ENSG00000090238.11 YPEL3 -141288 9.94e-07 0.29991 6e-13 schizophrenia 16_29983601 rs3814883 ENSG00000169592.14 INO80E -11693 4.35e-08 -0.389188 7e-12 schizophrenia 16_29983601 rs3814883 ENSG00000090238.11 YPEL3 -112643 5.81e-06 0.290765 7e-12 schizophrenia 16_29983601 rs3814883 ENSG00000169592.14 INO80E -11693 4.35e-08 -0.389188 2e-09 schizophrenia 16_29983601 rs3814883 ENSG00000090238.11 YPEL3 -112643 5.81e-06 0.290765 2e-09 schizophrenia 16_29989580 rs3814881 ENSG00000169592.14 INO80E -5714 4.91e-09 -0.401797 4e-12 schizophrenia 16_29989580 rs3814881 ENSG00000090238.11 YPEL3 -106664 1.26e-07 0.325459 4e-12 schizophrenia 16_29989580 rs3814881 ENSG00000169592.14 INO80E -5714 4.91e-09 -0.401797 8e-13 schizophrenia 16_29989580 rs3814881 ENSG00000090238.11 YPEL3 -106664 1.26e-07 0.325459 8e-13 schizophrenia 16_29989580 rs3814881 ENSG00000169592.14 INO80E -5714 4.91e-09 -0.401797 7e-12 schizophrenia 16_29989580 rs3814881 ENSG00000090238.11 YPEL3 -106664 1.26e-07 0.325459 7e-12 schizophrenia 16_68310460 rs8063446 ENSG00000132600.16 PRMT7 -514 5.22e-05 0.558578 3e-06 schizophrenia 16_69940756 rs3748386 ENSG00000255185.5 PDXDC2P -125189 7.49e-12 0.432588 6e-09 schizophrenia 16_89806562 rs12449000 ENSG00000204991.10 SPIRE2 -11617 3.6e-08 0.456037 5e-06 schizophrenia 17_12993236 rs9908102 ENSG00000006744.18 ELAC2 -24951 6.51e-08 0.317567 2e-06 schizophrenia 17_2221430 rs2131700 ENSG00000167720.12 SRR -81953 3.23e-14 -0.745829 2e-08 schizophrenia 17_36544271 rs12941866 ENSG00000278311.4 GGNBP2 -617 1.01e-08 0.380242 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000204650.14 LINC02210 46650 1.16e-16 -0.766671 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000214425.7 LRRC37A4P 116643 1.05e-16 0.77875 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000238083.7 LRRC37A2 -844533 1.07e-09 -0.676547 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000263503.1 MAPK8IP1P2 64638 1.6e-22 -1.01132 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000214401.4 KANSL1-AS1 -526598 1.96e-19 -0.957007 3e-08 schizophrenia 17_45779092 rs35076622 ENSG00000263503.1 MAPK8IP1P2 176752 3.18e-12 0.738957 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000214425.7 LRRC37A4P 228757 6.18e-10 -0.577229 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000214401.4 KANSL1-AS1 -414484 5.92e-12 0.730314 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000204650.14 LINC02210 158764 3.79e-10 0.574808 3e-12 schizophrenia 17_46784796 rs199503 ENSG00000214401.4 KANSL1-AS1 591220 9.5e-37 1.45716 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000185829.17 ARL17A 205114 1.02e-07 0.769984 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000238083.7 LRRC37A2 273285 2.38e-19 1.14223 3e-09 schizophrenia 18_12947463 rs3809912 ENSG00000101639.18 CEP192 -43899 1.12e-34 -1.03082 1e-08 schizophrenia 18_23546117 rs4800490 ENSG00000141458.12 NPC1 -40781 2.15e-13 0.443573 1e-10 schizophrenia 18_79862879 rs28735056 ENSG00000261126.7 RBFADN -184021 2.72e-05 -0.411859 5e-09 schizophrenia 18_79862879 rs28735056 ENSG00000261126.7 RBFADN -184021 2.72e-05 -0.411859 1e-12 schizophrenia 18_79862879 rs28735056 ENSG00000261126.7 RBFADN -184021 2.72e-05 -0.411859 5e-10 schizophrenia 18_79928124 rs55642704 ENSG00000261126.7 RBFADN -118776 8.96e-07 -0.479089 4e-11 schizophrenia 19_19165550 rs7249142 ENSG00000254901.7 BORCS8 -26678 4.47e-06 0.364235 8e-06 schizophrenia 19_19165550 rs7249142 ENSG00000254901.7 BORCS8 -26678 4.47e-06 0.364235 5e-06 schizophrenia 19_19165550 rs7249142 ENSG00000254901.7 BORCS8 -26678 4.47e-06 0.364235 9e-06 schizophrenia 19_48703346 rs281377 ENSG00000176920.11 FUT2 7375 2.64e-16 0.597272 2e-08 schizophrenia 19_48704000 rs603985 ENSG00000176920.11 FUT2 8029 9.98e-26 -0.64938 3e-08 schizophrenia 2_232923640 rs778353 ENSG00000066248.14 NGEF -89632 5.77e-06 0.389715 2e-11 schizophrenia 2_47993197 rs17396122 ENSG00000170802.15 FOXN2 -321440 7.29e-06 0.582944 1e-06 schizophrenia 2_48153579 rs12475492 ENSG00000170802.15 FOXN2 -161058 5.53e-06 0.549715 6e-09 schizophrenia 2_73334357 rs7560272 ENSG00000163016.9 ALMS1P1 -310562 6.73e-06 0.437092 6e-07 schizophrenia 2_73334357 rs7560272 ENSG00000163016.9 ALMS1P1 -310562 6.73e-06 0.437092 1e-07 schizophrenia 2_73404436 rs11899902 ENSG00000163016.9 ALMS1P1 -240483 1.69e-06 0.475402 5e-08 schizophrenia 2_96941334 rs6728642 ENSG00000196912.12 ANKRD36B -648631 4.03e-07 0.638063 5e-08 schizophrenia 2_96941334 rs6728642 ENSG00000230606.10 LINC02969 -492193 5.14e-06 0.619455 5e-08 schizophrenia 20_45041000 rs6065777 ENSG00000124134.8 KCNS1 -60112 1.78e-05 0.345023 2e-06 schizophrenia 21_36109179 rs6517329 ENSG00000159231.5 CBR3 -25733 4.44e-09 -0.550046 8e-06 schizophrenia 22_31269876 rs2413045 ENSG00000198089.15 SFI1 -218870 2.69e-06 0.339886 9e-06 schizophrenia 22_42141587 rs1800754 ENSG00000198951.11 NAGA 70745 3.88e-06 -0.369048 2e-15 schizophrenia 22_42141587 rs1800754 ENSG00000100197.20 CYP2D6 10681 2e-09 0.509272 2e-15 schizophrenia 22_42175022 rs760648 ENSG00000183172.8 SMDT1 95331 3.06e-06 0.331023 1e-08 schizophrenia 22_42175022 rs760648 ENSG00000183172.8 SMDT1 95331 3.06e-06 0.331023 1e-11 schizophrenia 22_42175022 rs760648 ENSG00000183172.8 SMDT1 95331 3.06e-06 0.331023 1e-10 schizophrenia 22_42175022 rs760648 ENSG00000183172.8 SMDT1 95331 3.06e-06 0.331023 3e-08 schizophrenia 22_42175022 rs760648 ENSG00000183172.8 SMDT1 95331 3.06e-06 0.331023 5e-09 schizophrenia 22_42207808 rs6002655 ENSG00000183172.8 SMDT1 128117 2.45e-05 0.299922 5e-10 schizophrenia 22_42207808 rs6002655 ENSG00000183172.8 SMDT1 128117 2.45e-05 0.299922 2e-14 schizophrenia 22_42207808 rs6002655 ENSG00000183172.8 SMDT1 128117 2.45e-05 0.299922 2e-09 schizophrenia 22_42207808 rs6002655 ENSG00000183172.8 SMDT1 128117 2.45e-05 0.299922 6e-10 schizophrenia 22_42207808 rs6002655 ENSG00000183172.8 SMDT1 128117 2.45e-05 0.299922 1e-08 schizophrenia 22_42207808 rs6002655 ENSG00000183172.8 SMDT1 128117 2.45e-05 0.299922 2e-09 schizophrenia 22_42207808 rs6002655 ENSG00000183172.8 SMDT1 128117 2.45e-05 0.299922 1e-09 schizophrenia 3_47860313 rs7429990 ENSG00000164048.13 ZNF589 -380787 4.55e-05 0.484036 3e-09 schizophrenia 3_50002761 rs4688756 ENSG00000004534.14 RBM6 62754 1.87e-13 -0.526597 2e-17 schizophrenia 3_50336862 rs2073499 ENSG00000114395.10 CYB561D2 -14230 6.48e-06 -0.385706 1e-13 schizophrenia 3_50336862 rs2073499 ENSG00000114395.10 CYB561D2 -14230 6.48e-06 -0.385706 3e-08 schizophrenia 3_50336862 rs2073499 ENSG00000114395.10 CYB561D2 -14230 6.48e-06 -0.385706 3e-08 schizophrenia 3_52781889 rs2710323 ENSG00000114904.12 NEK4 10940 1.09e-05 -0.322908 7e-13 schizophrenia 3_52781889 rs2710323 ENSG00000114904.12 NEK4 10940 1.09e-05 -0.322908 9e-10 schizophrenia 3_52781889 rs2710323 ENSG00000114904.12 NEK4 10940 1.09e-05 -0.322908 3e-08 schizophrenia 3_52799203 rs2535629 ENSG00000114904.12 NEK4 28254 2.09e-06 -0.383864 3e-12 schizophrenia 3_52799203 rs2535629 ENSG00000114904.12 NEK4 28254 2.09e-06 -0.383864 2e-11 schizophrenia 3_52804386 rs4687552 ENSG00000055955.15 ITIH4 -26353 1.72e-05 0.332061 1e-08 schizophrenia 3_52804386 rs4687552 ENSG00000114904.12 NEK4 33437 1.05e-07 -0.425233 1e-08 schizophrenia 3_52821213 rs2239547 ENSG00000055955.15 ITIH4 -9526 4.6e-11 0.554287 6e-08 schizophrenia 3_53002190 rs2581794 ENSG00000242142.1 SERBP1P3 -62901 1.44e-08 0.550083 3e-07 schizophrenia 3_53108964 rs2115780 ENSG00000242142.1 SERBP1P3 43873 1.45e-08 0.594344 4e-08 schizophrenia 4_102859339 rs223346 ENSG00000164039.14 BDH2 -240544 7.85e-06 0.422582 8e-10 schizophrenia 4_102869029 rs223332 ENSG00000164039.14 BDH2 -230854 1.12e-05 0.428414 3e-08 schizophrenia 4_102906331 rs11722779 ENSG00000164039.14 BDH2 -193552 3.09e-06 0.456203 4e-08 schizophrenia 4_102906331 rs11722779 ENSG00000164039.14 BDH2 -193552 3.09e-06 0.456203 3e-08 schizophrenia 4_103016776 rs7676765 ENSG00000164039.14 BDH2 -83107 3.09e-06 0.456203 3e-10 schizophrenia 4_103053903 rs7688014 ENSG00000164039.14 BDH2 -45980 9.92e-11 0.646969 3e-06 schizophrenia 5_102434022 rs6878284 ENSG00000173930.8 SLCO4C1 137473 1.21e-08 0.380194 2e-07 schizophrenia 5_102434022 rs6878284 ENSG00000173930.8 SLCO4C1 137473 1.21e-08 0.380194 9e-09 schizophrenia 5_102523613 rs1502844 ENSG00000173930.8 SLCO4C1 227064 5.92e-10 0.407295 1e-06 schizophrenia 5_50161448 rs8188203 ENSG00000170571.11 EMB -281800 1.03e-08 0.381209 8e-11 schizophrenia 5_50510208 rs10940346 ENSG00000170571.11 EMB 66960 1.92e-08 0.377282 1e-08 schizophrenia 5_50510208 rs10940346 ENSG00000170571.11 EMB 66960 1.92e-08 0.377282 2e-07 schizophrenia 5_50534452 rs76329678 ENSG00000170571.11 EMB 91204 2.06e-08 0.374073 6e-07 schizophrenia 6_25371141 rs62392365 ENSG00000186470.13 BTN3A2 -994018 4.57e-05 -0.893199 4e-15 schizophrenia 6_25874195 rs13198474 ENSG00000186470.13 BTN3A2 -490964 1.06e-06 -1.02591 3e-20 schizophrenia 6_26408323 rs75782365 ENSG00000186470.13 BTN3A2 43164 2.02e-09 -1.19824 8e-24 schizophrenia 6_26408323 rs75782365 ENSG00000186470.13 BTN3A2 43164 2.02e-09 -1.19824 3e-25 schizophrenia 6_26408323 rs75782365 ENSG00000186470.13 BTN3A2 43164 2.02e-09 -1.19824 2e-27 schizophrenia 6_26409662 rs41266839 ENSG00000186470.13 BTN3A2 44503 2.02e-09 -1.19824 7e-27 schizophrenia 6_26478024 rs34104395 ENSG00000186470.13 BTN3A2 112865 2.19e-13 -1.24513 9e-20 schizophrenia 6_27039908 rs35741362 ENSG00000186470.13 BTN3A2 674749 1.08e-05 -0.607131 2e-18 schizophrenia 6_27135801 rs2022272 ENSG00000224843.6 LINC00240 178809 5.57e-05 0.367382 4e-08 schizophrenia 6_27344299 rs764284 ENSG00000124613.8 ZNF391 -30316 2.31e-06 -0.416961 6e-11 schizophrenia 6_27856988 rs200986 ENSG00000235109.7 ZSCAN31 -499283 3.61e-06 0.489104 2e-11 schizophrenia 6_28195002 rs1150688 ENSG00000235109.7 ZSCAN31 -161269 1.01e-08 0.547435 8e-11 schizophrenia 6_28195002 rs1150688 ENSG00000187987.9 ZSCAN23 -248500 1.89e-09 0.520975 8e-11 schizophrenia 6_28230108 rs34787248 ENSG00000235109.7 ZSCAN31 -126163 2.36e-05 0.471954 2e-11 schizophrenia 6_28246920 rs17720293 ENSG00000197062.11 ZSCAN26 -20090 1.81e-05 -0.481804 3e-23 schizophrenia 6_28610509 rs116663187 ENSG00000187987.9 ZSCAN23 167007 3.17e-07 0.513494 2e-15 schizophrenia 6_28699892 rs116137698 ENSG00000204644.9 ZFP57 -981218 6.72e-05 1.08824 3e-26 schizophrenia 6_28744470 rs115329265 ENSG00000229274.1 LINC02829 -753039 1.26e-05 0.762806 6e-33 schizophrenia 6_28744470 rs115329265 ENSG00000229274.1 LINC02829 -753039 1.26e-05 0.762806 2e-27 schizophrenia 6_28744470 rs115329265 ENSG00000229274.1 LINC02829 -753039 1.26e-05 0.762806 5e-36 schizophrenia 6_28744470 rs115329265 ENSG00000229274.1 LINC02829 -753039 1.26e-05 0.762806 3e-31 schizophrenia 6_28744470 rs115329265 ENSG00000229274.1 LINC02829 -753039 1.26e-05 0.762806 1e-27 schizophrenia 6_29015497 rs116757206 ENSG00000204644.9 ZFP57 -665613 6.72e-05 1.08824 1e-25 schizophrenia 6_29176755 rs9257566 ENSG00000281831.1 HCP5B -697028 7.2e-05 0.779847 7e-30 schizophrenia 6_29276442 rs144447022 ENSG00000204644.9 ZFP57 -404668 6.72e-05 1.08824 2e-28 schizophrenia 6_29276442 rs144447022 ENSG00000204644.9 ZFP57 -404668 6.72e-05 1.08824 9e-28 schizophrenia 6_29445191 rs145501595 ENSG00000204644.9 ZFP57 -235919 2.99e-06 0.647361 1e-10 schizophrenia 6_29445191 rs145501595 ENSG00000281831.1 HCP5B -428592 2.89e-07 0.684102 1e-10 schizophrenia 6_29445191 rs145501595 ENSG00000204644.9 ZFP57 -235919 2.99e-06 0.647361 1e-10 schizophrenia 6_29445191 rs145501595 ENSG00000281831.1 HCP5B -428592 2.89e-07 0.684102 1e-10 schizophrenia 6_29638984 rs138488080 ENSG00000281831.1 HCP5B -234799 4.61e-16 1.14601 3e-16 schizophrenia 6_29638984 rs138488080 ENSG00000204644.9 ZFP57 -42126 5.69e-24 1.372 3e-16 schizophrenia 6_29638984 rs138488080 ENSG00000239257.1 RPL23AP1 -87898 1.99e-05 0.629967 3e-16 schizophrenia 6_29638984 rs138488080 ENSG00000230795.3 HLA-K -288194 4.2e-07 -0.826182 3e-16 schizophrenia 6_29639270 rs114041423 ENSG00000239257.1 RPL23AP1 -87612 4.78e-06 0.563576 1e-15 schizophrenia 6_29639270 rs114041423 ENSG00000230795.3 HLA-K -287908 1.38e-05 -0.603954 1e-15 schizophrenia 6_29639270 rs114041423 ENSG00000204644.9 ZFP57 -41840 4.14e-29 1.22473 1e-15 schizophrenia 6_29639270 rs114041423 ENSG00000281831.1 HCP5B -234513 9.48e-14 0.899951 1e-15 schizophrenia 6_29642504 rs115374247 ENSG00000204644.9 ZFP57 -38606 5.54e-07 0.620801 2e-13 schizophrenia 6_29642504 rs115374247 ENSG00000281831.1 HCP5B -231279 5.86e-07 0.601702 2e-13 schizophrenia 6_29642504 rs115374247 ENSG00000239257.1 RPL23AP1 -84378 3.26e-07 0.584122 2e-13 schizophrenia 6_29642504 rs115374247 ENSG00000204644.9 ZFP57 -38606 5.54e-07 0.620801 2e-13 schizophrenia 6_29642504 rs115374247 ENSG00000281831.1 HCP5B -231279 5.86e-07 0.601702 2e-13 schizophrenia 6_29642504 rs115374247 ENSG00000239257.1 RPL23AP1 -84378 3.26e-07 0.584122 2e-13 schizophrenia 6_29660317 rs143363269 ENSG00000230795.3 HLA-K -266861 1.38e-05 -0.603954 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000239257.1 RPL23AP1 -66565 4.78e-06 0.563576 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000281831.1 HCP5B -213466 9.48e-14 0.899951 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000204644.9 ZFP57 -20793 4.14e-29 1.22473 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000230795.3 HLA-K -266861 1.38e-05 -0.603954 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000239257.1 RPL23AP1 -66565 4.78e-06 0.563576 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000281831.1 HCP5B -213466 9.48e-14 0.899951 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000204644.9 ZFP57 -20793 4.14e-29 1.22473 1e-10 schizophrenia 6_29681770 rs385492 ENSG00000204644.9 ZFP57 660 5.52e-05 0.479851 1e-08 schizophrenia 6_29681770 rs385492 ENSG00000204644.9 ZFP57 660 5.52e-05 0.479851 4e-09 schizophrenia 6_29696112 rs3131888 ENSG00000281831.1 HCP5B -177671 6.18e-07 0.592727 7e-06 schizophrenia 6_29696112 rs3131888 ENSG00000239257.1 RPL23AP1 -30770 1.13e-06 0.55196 7e-06 schizophrenia 6_29696112 rs3131888 ENSG00000204644.9 ZFP57 15002 2.88e-09 0.711844 7e-06 schizophrenia 6_29783215 rs144018888 ENSG00000204644.9 ZFP57 102105 2.6e-05 0.547858 3e-12 schizophrenia 6_29783215 rs144018888 ENSG00000176998.4 HCG4 -9221 9.86e-10 -0.782616 3e-12 schizophrenia 6_29783215 rs144018888 ENSG00000281831.1 HCP5B -90568 1.26e-06 0.605693 3e-12 schizophrenia 6_29783215 rs144018888 ENSG00000239257.1 RPL23AP1 56333 4.23e-05 0.493869 3e-12 schizophrenia 6_29783228 rs144373461 ENSG00000281831.1 HCP5B -90555 1.33e-06 0.622987 2e-17 schizophrenia 6_29783228 rs144373461 ENSG00000239257.1 RPL23AP1 56346 1.02e-05 0.545595 2e-17 schizophrenia 6_29783228 rs144373461 ENSG00000176998.4 HCG4 -9208 1.86e-11 -0.872915 2e-17 schizophrenia 6_29783228 rs144373461 ENSG00000281831.1 HCP5B -90555 1.33e-06 0.622987 6e-16 schizophrenia 6_29783228 rs144373461 ENSG00000239257.1 RPL23AP1 56346 1.02e-05 0.545595 6e-16 schizophrenia 6_29783228 rs144373461 ENSG00000176998.4 HCG4 -9208 1.86e-11 -0.872915 6e-16 schizophrenia 6_29783228 rs144373461 ENSG00000281831.1 HCP5B -90555 1.33e-06 0.622987 1e-17 schizophrenia 6_29783228 rs144373461 ENSG00000239257.1 RPL23AP1 56346 1.02e-05 0.545595 1e-17 schizophrenia 6_29783228 rs144373461 ENSG00000176998.4 HCG4 -9208 1.86e-11 -0.872915 1e-17 schizophrenia 6_29783976 rs142425863 ENSG00000281831.1 HCP5B -89807 8.4e-07 0.61859 5e-11 schizophrenia 6_29783976 rs142425863 ENSG00000204644.9 ZFP57 102866 2.11e-05 0.556973 5e-11 schizophrenia 6_29783976 rs142425863 ENSG00000176998.4 HCG4 -8460 3.51e-12 -0.876853 5e-11 schizophrenia 6_29842049 rs116326873 ENSG00000239257.1 RPL23AP1 115167 4.45e-06 0.614608 2e-17 schizophrenia 6_29842049 rs116326873 ENSG00000281831.1 HCP5B -31734 4.42e-10 0.846788 2e-17 schizophrenia 6_29842049 rs116326873 ENSG00000204644.9 ZFP57 160939 1.6e-08 0.800933 2e-17 schizophrenia 6_29842049 rs116326873 ENSG00000176998.4 HCG4 49613 1.88e-06 -0.704163 2e-17 schizophrenia 6_29882943 rs151267808 ENSG00000281831.1 HCP5B 9160 1.65e-05 0.995827 1e-22 schizophrenia 6_29882943 rs151267808 ENSG00000204644.9 ZFP57 201833 1.07e-05 1.04622 1e-22 schizophrenia 6_29931900 rs2524005 ENSG00000230795.3 HLA-K 4722 3.44e-09 -0.727708 5e-07 schizophrenia 6_29931900 rs2524005 ENSG00000281831.1 HCP5B 58117 1.18e-11 0.764668 5e-07 schizophrenia 6_29931900 rs2524005 ENSG00000204644.9 ZFP57 250790 1.51e-12 0.814672 5e-07 schizophrenia 6_29955302 rs111312615 ENSG00000281831.1 HCP5B 81519 3.12e-06 0.577948 1e-11 schizophrenia 6_29955302 rs111312615 ENSG00000230795.3 HLA-K 28124 1.16e-05 -0.58382 1e-11 schizophrenia 6_29955302 rs111312615 ENSG00000235821.1 IFITM4P 204154 2.91e-06 -0.566371 1e-11 schizophrenia 6_29955302 rs111312615 ENSG00000176998.4 HCG4 162866 3.1e-06 -0.609104 1e-11 schizophrenia 6_29955302 rs111312615 ENSG00000204644.9 ZFP57 274192 4.82e-06 0.584658 1e-11 schizophrenia 6_29955302 rs111312615 ENSG00000281831.1 HCP5B 81519 3.12e-06 0.577948 4e-12 schizophrenia 6_29955302 rs111312615 ENSG00000230795.3 HLA-K 28124 1.16e-05 -0.58382 4e-12 schizophrenia 6_29955302 rs111312615 ENSG00000235821.1 IFITM4P 204154 2.91e-06 -0.566371 4e-12 schizophrenia 6_29955302 rs111312615 ENSG00000176998.4 HCG4 162866 3.1e-06 -0.609104 4e-12 schizophrenia 6_29955302 rs111312615 ENSG00000204644.9 ZFP57 274192 4.82e-06 0.584658 4e-12 schizophrenia 6_29972902 rs114204022 ENSG00000204644.9 ZFP57 291792 1.79e-12 0.723252 5e-11 schizophrenia 6_29972902 rs114204022 ENSG00000235290.1 HLA-W 16306 1.22e-05 0.553842 5e-11 schizophrenia 6_29972902 rs114204022 ENSG00000230795.3 HLA-K 45724 8.04e-14 -0.785785 5e-11 schizophrenia 6_29972902 rs114204022 ENSG00000227262.3 HCG4B 45929 2.1e-05 -0.472574 5e-11 schizophrenia 6_29972902 rs114204022 ENSG00000281831.1 HCP5B 99119 8.07e-08 0.55733 5e-11 schizophrenia 6_29983056 rs114950038 ENSG00000281831.1 HCP5B 109273 8.93e-08 0.541213 2e-12 schizophrenia 6_29983056 rs114950038 ENSG00000230795.3 HLA-K 55878 7.32e-07 -0.540053 2e-12 schizophrenia 6_29983056 rs114950038 ENSG00000239257.1 RPL23AP1 256174 2.8e-05 0.412736 2e-12 schizophrenia 6_30064745 rs8321 ENSG00000281831.1 HCP5B 190962 5.85e-05 0.952519 8e-09 schizophrenia 6_30639723 rs149915948 ENSG00000204644.9 ZFP57 958613 2.79e-06 0.566284 7e-11 schizophrenia 6_30719037 rs114441450 ENSG00000281831.1 HCP5B 845254 3.04e-06 0.498827 2e-08 schizophrenia 6_30937536 rs114838832 ENSG00000137411.16 VARS2 23331 6.72e-11 -0.521785 2e-10 schizophrenia 6_31222761 rs116067082 ENSG00000204531.17 POU5F1 42030 1.23e-05 -0.485903 4e-11 schizophrenia 6_31222761 rs116067082 ENSG00000137411.16 VARS2 308556 9.72e-06 0.407907 4e-11 schizophrenia 6_31229085 rs144762289 ENSG00000204536.13 CCHCR1 70847 2.37e-05 0.521738 3e-17 schizophrenia 6_31245806 rs114142645 ENSG00000204538.3 PSORS1C2 106456 2.21e-06 0.531702 2e-08 schizophrenia 6_31245806 rs114142645 ENSG00000204531.17 POU5F1 65075 1.69e-06 0.54874 2e-08 schizophrenia 6_31245806 rs114142645 ENSG00000204528.3 PSORS1C3 67907 6.48e-06 0.615335 2e-08 schizophrenia 6_31254404 rs1793889 ENSG00000204538.3 PSORS1C2 115054 1.14e-05 0.461359 1e-11 schizophrenia 6_31268274 rs111977918 ENSG00000204542.2 C6orf15 155715 3.19e-07 0.597931 2e-08 schizophrenia 6_31300843 rs114274203 ENSG00000277402.1 MIR6891 -54473 1.88e-05 0.543825 3e-12 schizophrenia 6_31383745 rs114291394 ENSG00000277402.1 MIR6891 28429 1.18e-05 0.572588 2e-10 schizophrenia 6_31635190 rs1046089 ENSG00000240053.8 LY6G5B -34977 4.12e-05 -0.220781 4e-06 schizophrenia 6_31755003 rs149544854 ENSG00000204396.10 VWA7 -22291 1.59e-05 -0.385431 5e-09 schizophrenia 6_31940060 rs2293751 ENSG00000248290.1 TNXA -72412 3.09e-06 -0.432303 3e-08 schizophrenia 6_31977869 rs2734325 ENSG00000248290.1 TNXA -34603 3.55e-06 -0.483464 3e-07 schizophrenia 6_32147408 rs145076523 ENSG00000179344.16 HLA-DQB1 -520975 2.37e-05 -0.639657 5e-13 schizophrenia 6_32186508 rs114810457 ENSG00000204305.13 AGER 2184 1.12e-06 0.402607 5e-10 schizophrenia 6_32223264 rs115963308 ENSG00000204301.6 NOTCH4 -803 2.62e-06 -0.427445 3e-08 schizophrenia 6_32317765 rs114473235 ENSG00000198502.5 HLA-DRB5 -212522 7.37e-07 -0.533248 8e-07 schizophrenia 6_32368989 rs115558405 ENSG00000244731.7 C4A 386965 3.47e-05 -0.490345 2e-13 schizophrenia 6_32413695 rs116047537 ENSG00000198502.5 HLA-DRB5 -116592 1.39e-09 -0.667852 2e-09 schizophrenia 6_32464185 rs114002140 ENSG00000198502.5 HLA-DRB5 -66102 1.3e-08 -0.736315 9e-14 schizophrenia 6_32464869 rs115406947 ENSG00000244731.7 C4A 482845 1.59e-06 -0.671814 2e-18 schizophrenia 6_32466042 rs138984909 ENSG00000198502.5 HLA-DRB5 -64245 1.05e-07 -0.691828 4e-13 schizophrenia 6_32469754 rs187696124 ENSG00000198502.5 HLA-DRB5 -60533 1.3e-08 -0.736315 7e-17 schizophrenia 6_32470272 rs149998036 ENSG00000198502.5 HLA-DRB5 -60015 1.3e-08 -0.736315 3e-09 schizophrenia 6_32534622 rs180778602 ENSG00000244731.7 C4A 552598 3e-07 -0.760928 4e-12 schizophrenia 6_32584671 rs11753207 ENSG00000244731.7 C4A 602647 7.82e-06 -0.64959 3e-11 schizophrenia 6_32597688 rs2760981 ENSG00000198502.5 HLA-DRB5 67401 3.22e-14 -0.713042 4e-11 schizophrenia 6_32614112 rs4530903 ENSG00000196126.11 HLA-DRB1 24264 5.9e-07 0.751743 5e-06 schizophrenia 6_32634492 rs9272219 ENSG00000179344.16 HLA-DQB1 -33891 4.14e-10 -0.741675 7e-08 schizophrenia 6_32634492 rs9272219 ENSG00000232629.8 HLA-DQB2 -129042 1.24e-06 0.615449 7e-08 schizophrenia 6_32635879 rs116139966 ENSG00000179344.16 HLA-DQB1 -32504 1.25e-08 -0.685714 1e-09 schizophrenia 6_32635879 rs116139966 ENSG00000232629.8 HLA-DQB2 -127655 3.46e-06 0.592288 1e-09 schizophrenia 6_32668836 rs147875011 ENSG00000232629.8 HLA-DQB2 -94698 6.48e-13 0.808269 3e-10 schizophrenia 6_32668836 rs147875011 ENSG00000179344.16 HLA-DQB1 453 3.29e-11 -0.730509 3e-10 schizophrenia 6_32668836 rs147875011 ENSG00000237541.3 HLA-DQA2 -72506 3.03e-06 0.589652 3e-10 schizophrenia 6_32706552 rs114771361 ENSG00000237541.3 HLA-DQA2 -34790 3.37e-05 0.524857 5e-10 schizophrenia 6_32707332 rs9275524 ENSG00000223534.1 HLA-DQB1-AS1 46977 5.96e-06 -0.447352 2e-07 schizophrenia 6_32707332 rs9275524 ENSG00000179344.16 HLA-DQB1 38949 7.65e-07 -0.593764 2e-07 schizophrenia 6_32707332 rs9275524 ENSG00000237541.3 HLA-DQA2 -34010 1.52e-08 0.733982 2e-07 schizophrenia 6_32707332 rs9275524 ENSG00000229391.7 HLA-DRB6 147310 1.27e-07 0.627471 2e-07 schizophrenia 6_32725517 rs115682897 ENSG00000198502.5 HLA-DRB5 195230 2.31e-06 -0.617947 7e-14 schizophrenia 6_87144623 rs9362395 ENSG00000111850.10 SMIM8 -178052 1.8e-05 0.715148 7e-07 schizophrenia 7_100699412 rs221780 ENSG00000146830.9 GIGYF1 9964 9.2e-09 -0.41941 1e-07 schizophrenia 7_100699412 rs221780 ENSG00000146830.9 GIGYF1 9964 9.2e-09 -0.41941 3e-07 schizophrenia 7_100699412 rs221780 ENSG00000146830.9 GIGYF1 9964 9.2e-09 -0.41941 3e-06 schizophrenia 7_100715476 rs492430 ENSG00000146830.9 GIGYF1 26028 1.01e-07 -0.375353 2e-08 schizophrenia 7_100717894 rs1734907 ENSG00000146830.9 GIGYF1 28446 1.01e-07 -0.375353 4e-06 schizophrenia 7_140965721 rs10265001 ENSG00000261115.5 TMEM178B -108511 1.12e-05 0.471381 5e-09 schizophrenia 7_140967165 rs13236223 ENSG00000261115.5 TMEM178B -107067 1.12e-05 0.471381 2e-08 schizophrenia 7_23871880 rs2106747 ENSG00000188732.10 FAM221A 191750 9.8e-06 0.313179 3e-08 schizophrenia 7_23871880 rs2106747 ENSG00000196335.12 STK31 161713 4.85e-06 0.413257 3e-08 schizophrenia 7_23876057 rs10262624 ENSG00000196335.12 STK31 165890 4.85e-06 0.413257 2e-06 schizophrenia 7_23876057 rs10262624 ENSG00000188732.10 FAM221A 195927 9.8e-06 0.313179 2e-06 schizophrenia 7_76335026 rs2961033 ENSG00000243566.6 UPK3B -175402 3.3e-07 0.4651 5e-07 schizophrenia 8_143572424 rs4873803 ENSG00000147813.15 NAPRT -5933 6.21e-10 0.642586 1e-09 schizophrenia 8_143573145 rs10866912 ENSG00000147813.15 NAPRT -5212 4.29e-09 0.613958 4e-08 schizophrenia 8_26384756 rs117325001 ENSG00000228451.3 SDAD1P1 1859 2.01e-05 -0.484904 7e-06 schizophrenia 8_26384756 rs117325001 ENSG00000228451.3 SDAD1P1 1859 2.01e-05 -0.484904 2e-13 schizophrenia 8_26411675 rs1042992 ENSG00000228451.3 SDAD1P1 28778 1.43e-05 -0.490385 2e-07 schizophrenia 8_26415252 rs73219805 ENSG00000228451.3 SDAD1P1 32355 1.43e-05 -0.490385 4e-07 schizophrenia 8_26415252 rs73219805 ENSG00000228451.3 SDAD1P1 32355 1.43e-05 -0.490385 2e-12 schizophrenia 8_26415252 rs73219805 ENSG00000228451.3 SDAD1P1 32355 1.43e-05 -0.490385 2e-11 schizophrenia 8_26421657 rs73219806 ENSG00000228451.3 SDAD1P1 38760 1.43e-05 -0.490385 7e-09 schizophrenia 8_8234503 rs2980436 ENSG00000173295.7 FAM86B3P 5908 1.9e-08 0.503792 2e-08 schizophrenia 8_8234503 rs2980436 ENSG00000253893.2 FAM85B 7889 7.8e-07 -0.597066 2e-08 schizophrenia 8_8234503 rs2980436 ENSG00000254153.1 LINC02950 -226834 2.66e-06 0.457367 2e-08 schizophrenia 8_8234503 rs2980436 ENSG00000173295.7 FAM86B3P 5908 1.9e-08 0.503792 4e-07 schizophrenia 8_8234503 rs2980436 ENSG00000253893.2 FAM85B 7889 7.8e-07 -0.597066 4e-07 schizophrenia 8_8234503 rs2980436 ENSG00000254153.1 LINC02950 -226834 2.66e-06 0.457367 4e-07 schizophrenia 8_8234883 rs1878561 ENSG00000253893.2 FAM85B 8269 1.72e-07 -0.585855 1e-07 schizophrenia 8_8234883 rs1878561 ENSG00000254153.1 LINC02950 -226454 2.2e-07 0.466263 1e-07 schizophrenia 8_8240516 rs2945232 ENSG00000254153.1 LINC02950 -220821 2.41e-06 0.423191 2e-08 schizophrenia 8_8240516 rs2945232 ENSG00000173295.7 FAM86B3P 11921 3.02e-07 0.42771 2e-08 schizophrenia 8_8240516 rs2945232 ENSG00000253893.2 FAM85B 13902 1.06e-07 -0.587498 2e-08 schizophrenia 9_128846507 rs2977993 ENSG00000198917.12 SPOUT1 16686 2.4e-08 0.424188 2e-06 schizophrenia 9_22767165 rs505061 ENSG00000234840.1 LINC01239 120965 2.54e-08 -0.516286 2e-09 schizophrenia 9_22767165 rs505061 ENSG00000234840.1 LINC01239 120965 2.54e-08 -0.516286 5e-09 schizophrenia X_153942092 rs2269372 ENSG00000177854.7 TMEM187 -30235 1.2e-12 -0.380479 4e-08