DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE schizophrenia 1_109498058 rs2297797 ENSG00000181754.6 AMIGO1 -11680 9.43e-08 -0.446676 3e-08 schizophrenia 1_147611315 rs583583 ENSG00000162836.11 ACP6 -59181 7.32e-14 0.623993 6e-07 schizophrenia 1_155906822 rs3856261 ENSG00000143622.10 RIT1 -4582 5.24e-06 0.415668 3e-06 schizophrenia 1_173677634 rs61826793 ENSG00000270084.1 GAS5-AS1 -185614 9.75e-05 -0.614842 4e-08 schizophrenia 1_205066327 rs16937 ENSG00000117222.13 RBBP5 -55688 1.02e-06 -0.286571 5e-07 schizophrenia 1_22103576 rs2143103 ENSG00000218510.6 LINC00339 79045 7.84e-09 0.603907 3e-09 schizophrenia 1_8429242 rs301799 ENSG00000232912.5 RERE-AS1 4597 6.37e-08 0.517105 2e-08 schizophrenia 10_100152437 rs1408579 ENSG00000095485.16 CWF19L1 -115243 4.48e-11 0.3373 2e-08 schizophrenia 10_102653628 rs12764388 ENSG00000166275.15 BORCS7 -200595 2.98e-06 -0.472618 2e-08 schizophrenia 10_102776603 rs4147157 ENSG00000156398.12 SFXN2 62065 4.58e-06 -0.407262 1e-15 schizophrenia 10_102852578 rs11191419 ENSG00000214435.7 AS3MT -16938 1.58e-17 -0.505748 3e-18 schizophrenia 10_102852578 rs11191419 ENSG00000166275.15 BORCS7 -1645 1.93e-11 -0.402585 3e-18 schizophrenia 10_102852578 rs11191419 ENSG00000214435.7 AS3MT -16938 1.58e-17 -0.505748 6e-19 schizophrenia 10_102852578 rs11191419 ENSG00000166275.15 BORCS7 -1645 1.93e-11 -0.402585 6e-19 schizophrenia 10_102852578 rs11191419 ENSG00000214435.7 AS3MT -16938 1.58e-17 -0.505748 1e-16 schizophrenia 10_102852578 rs11191419 ENSG00000166275.15 BORCS7 -1645 1.93e-11 -0.402585 1e-16 schizophrenia 10_102866129 rs11191424 ENSG00000214435.7 AS3MT -3387 8e-18 -0.508517 4e-20 schizophrenia 10_102866129 rs11191424 ENSG00000166275.15 BORCS7 11906 1.06e-11 -0.406389 4e-20 schizophrenia 10_102866129 rs11191424 ENSG00000214435.7 AS3MT -3387 8e-18 -0.508517 3e-16 schizophrenia 10_102866129 rs11191424 ENSG00000166275.15 BORCS7 11906 1.06e-11 -0.406389 3e-16 schizophrenia 10_102900247 rs11191454 ENSG00000213277.3 MARCKSL1P1 -275307 1.16e-07 1.02406 1e-08 schizophrenia 10_102989968 rs10883816 ENSG00000166275.15 BORCS7 135745 1.04e-06 -0.300454 4e-11 schizophrenia 10_102989968 rs10883816 ENSG00000214435.7 AS3MT 120452 2.07e-11 -0.412003 4e-11 schizophrenia 10_103004514 rs11191499 ENSG00000213277.3 MARCKSL1P1 -171040 2.58e-07 0.980655 1e-09 schizophrenia 10_103016151 rs7914558 ENSG00000214435.7 AS3MT 146635 8.14e-12 -0.414776 2e-09 schizophrenia 10_103016151 rs7914558 ENSG00000166275.15 BORCS7 161928 8.17e-08 -0.323748 2e-09 schizophrenia 10_103016151 rs7914558 ENSG00000214435.7 AS3MT 146635 8.14e-12 -0.414776 2e-08 schizophrenia 10_103016151 rs7914558 ENSG00000166275.15 BORCS7 161928 8.17e-08 -0.323748 2e-08 schizophrenia 10_103033891 rs75970938 ENSG00000213277.3 MARCKSL1P1 -141663 1.16e-07 1.02406 2e-25 schizophrenia 10_103089359 rs10786736 ENSG00000213277.3 MARCKSL1P1 -86195 6.08e-07 0.894392 4e-17 schizophrenia 10_103089359 rs10786736 ENSG00000213277.3 MARCKSL1P1 -86195 6.08e-07 0.894392 5e-11 schizophrenia 10_103089359 rs10786736 ENSG00000213277.3 MARCKSL1P1 -86195 6.08e-07 0.894392 8e-12 schizophrenia 10_103111522 rs10883832 ENSG00000213277.3 MARCKSL1P1 -64032 1.16e-07 1.02406 3e-14 schizophrenia 10_103111522 rs10883832 ENSG00000213277.3 MARCKSL1P1 -64032 1.16e-07 1.02406 2e-16 schizophrenia 10_103146454 rs11191580 ENSG00000213277.3 MARCKSL1P1 -29100 1.16e-07 1.02406 2e-09 schizophrenia 10_103146454 rs11191580 ENSG00000213277.3 MARCKSL1P1 -29100 1.16e-07 1.02406 1e-08 schizophrenia 10_103146454 rs11191580 ENSG00000213277.3 MARCKSL1P1 -29100 1.16e-07 1.02406 3e-08 schizophrenia 10_103153896 rs11191582 ENSG00000156398.12 SFXN2 439358 8.06e-05 -0.376414 4e-14 schizophrenia 10_103153896 rs11191582 ENSG00000213277.3 MARCKSL1P1 -21658 4.79e-08 1.04814 4e-14 schizophrenia 10_103153896 rs11191582 ENSG00000156398.12 SFXN2 439358 8.06e-05 -0.376414 3e-17 schizophrenia 10_103153896 rs11191582 ENSG00000213277.3 MARCKSL1P1 -21658 4.79e-08 1.04814 3e-17 schizophrenia 10_103169157 rs12416331 ENSG00000213277.3 MARCKSL1P1 -6397 1.16e-07 1.02406 7e-18 schizophrenia 10_103192742 rs79780963 ENSG00000213277.3 MARCKSL1P1 17188 1.16e-07 1.02406 3e-14 schizophrenia 10_103192742 rs79780963 ENSG00000213277.3 MARCKSL1P1 17188 1.16e-07 1.02406 3e-14 schizophrenia 10_103300139 rs11191648 ENSG00000213277.3 MARCKSL1P1 124585 2.82e-05 0.842881 5e-09 schizophrenia 11_130848816 rs10791098 ENSG00000120451.10 SNX19 -67693 2.37e-06 -0.371484 2e-12 schizophrenia 11_130848918 rs10791099 ENSG00000120451.10 SNX19 -67591 2.37e-06 -0.371484 1e-08 schizophrenia 11_130849166 rs10750450 ENSG00000120451.10 SNX19 -67343 2.37e-06 -0.371484 7e-13 schizophrenia 11_130861542 rs73022874 ENSG00000120451.10 SNX19 -54967 8.58e-26 0.835357 5e-10 schizophrenia 11_130935439 rs7112616 ENSG00000120451.10 SNX19 18930 1.97e-05 -0.323511 2e-09 schizophrenia 11_130941461 rs35774874 ENSG00000120451.10 SNX19 24952 1.33e-05 -0.328062 2e-09 schizophrenia 11_130941461 rs35774874 ENSG00000120451.10 SNX19 24952 1.33e-05 -0.328062 2e-11 schizophrenia 11_130947684 rs7940866 ENSG00000120451.10 SNX19 31175 1.87e-05 -0.319636 2e-09 schizophrenia 11_130960853 rs10894294 ENSG00000120451.10 SNX19 44344 7.53e-06 -0.338834 3e-06 schizophrenia 11_130960853 rs10894294 ENSG00000120451.10 SNX19 44344 7.53e-06 -0.338834 3e-07 schizophrenia 11_130976537 rs10791106 ENSG00000120451.10 SNX19 60028 2.51e-05 -0.319357 1e-15 schizophrenia 11_130986204 rs10791111 ENSG00000120451.10 SNX19 69695 2.51e-05 -0.319357 1e-08 schizophrenia 11_131022000 rs10894308 ENSG00000120451.10 SNX19 105491 2.74e-05 -0.324104 2e-08 schizophrenia 11_131022000 rs10894308 ENSG00000120451.10 SNX19 105491 2.74e-05 -0.324104 2e-08 schizophrenia 11_131022000 rs10894308 ENSG00000120451.10 SNX19 105491 2.74e-05 -0.324104 9e-09 schizophrenia 11_61851136 rs174592 ENSG00000134824.13 FADS2 34880 8.27e-11 0.533339 6e-09 schizophrenia 11_65616284 rs58950470 ENSG00000172922.8 RNASEH2C -104663 8.36e-08 -0.2219 3e-06 schizophrenia 11_65616284 rs58950470 ENSG00000172803.17 SNX32 -217357 2.32e-05 0.458714 3e-06 schizophrenia 11_65616284 rs58950470 ENSG00000173327.7 MAP3K11 2035 1.14e-05 -0.179702 3e-06 schizophrenia 11_8877853 rs2455601 ENSG00000254860.5 TMEM9B-AS1 -86921 1.38e-05 -0.581691 7e-06 schizophrenia 12_110285440 rs4766428 ENSG00000111237.18 VPS29 -216119 8.78e-06 -0.290421 4e-09 schizophrenia 12_110285440 rs4766428 ENSG00000111237.18 VPS29 -216119 8.78e-06 -0.290421 2e-08 schizophrenia 12_110285440 rs4766428 ENSG00000111237.18 VPS29 -216119 8.78e-06 -0.290421 5e-09 schizophrenia 12_110285440 rs4766428 ENSG00000111237.18 VPS29 -216119 8.78e-06 -0.290421 3e-09 schizophrenia 12_110285440 rs4766428 ENSG00000111237.18 VPS29 -216119 8.78e-06 -0.290421 6e-10 schizophrenia 12_110285440 rs4766428 ENSG00000111237.18 VPS29 -216119 8.78e-06 -0.290421 3e-10 schizophrenia 12_110285440 rs4766428 ENSG00000111237.18 VPS29 -216119 8.78e-06 -0.290421 1e-09 schizophrenia 12_110285440 rs4766428 ENSG00000111237.18 VPS29 -216119 8.78e-06 -0.290421 2e-08 schizophrenia 12_110285440 rs4766428 ENSG00000111237.18 VPS29 -216119 8.78e-06 -0.290421 3e-14 schizophrenia 12_110285440 rs4766428 ENSG00000111237.18 VPS29 -216119 8.78e-06 -0.290421 5e-08 schizophrenia 12_110285440 rs4766428 ENSG00000111237.18 VPS29 -216119 8.78e-06 -0.290421 2e-08 schizophrenia 12_110285440 rs4766428 ENSG00000111237.18 VPS29 -216119 8.78e-06 -0.290421 2e-10 schizophrenia 12_122099234 rs147786161 ENSG00000175727.13 MLXIP 20512 3.55e-08 0.301506 3e-09 schizophrenia 12_122998879 rs1984658 ENSG00000150967.17 ABCB9 17309 1.33e-08 -0.395825 9e-14 schizophrenia 12_122998879 rs1984658 ENSG00000051825.14 MPHOSPH9 -245135 2.81e-06 -0.203972 9e-14 schizophrenia 12_122998879 rs1984658 ENSG00000111328.6 CDK2AP1 -273455 1.3e-05 0.205014 9e-14 schizophrenia 12_123108938 rs7299943 ENSG00000051825.14 MPHOSPH9 -135076 1.51e-07 0.256525 2e-08 schizophrenia 12_123108938 rs7299943 ENSG00000111328.6 CDK2AP1 -163396 6e-10 -0.318565 2e-08 schizophrenia 12_123108938 rs7299943 ENSG00000150967.17 ABCB9 127368 6.19e-08 0.429708 2e-08 schizophrenia 12_123148383 rs1727302 ENSG00000150967.17 ABCB9 166813 4.14e-07 -0.380794 3e-16 schizophrenia 12_123148383 rs1727302 ENSG00000051825.14 MPHOSPH9 -95631 1.79e-07 -0.240185 3e-16 schizophrenia 12_123148383 rs1727302 ENSG00000111328.6 CDK2AP1 -123951 9.41e-07 0.243714 3e-16 schizophrenia 12_123165788 rs1615350 ENSG00000111328.6 CDK2AP1 -106546 9.63e-07 0.24339 1e-25 schizophrenia 12_123165788 rs1615350 ENSG00000051825.14 MPHOSPH9 -78226 1.69e-08 -0.257289 1e-25 schizophrenia 12_123165788 rs1615350 ENSG00000150967.17 ABCB9 184218 1.17e-06 -0.366749 1e-25 schizophrenia 12_123165788 rs1615350 ENSG00000111328.6 CDK2AP1 -106546 9.63e-07 0.24339 5e-10 schizophrenia 12_123165788 rs1615350 ENSG00000051825.14 MPHOSPH9 -78226 1.69e-08 -0.257289 5e-10 schizophrenia 12_123165788 rs1615350 ENSG00000150967.17 ABCB9 184218 1.17e-06 -0.366749 5e-10 schizophrenia 12_123165788 rs1615350 ENSG00000111328.6 CDK2AP1 -106546 9.63e-07 0.24339 6e-18 schizophrenia 12_123165788 rs1615350 ENSG00000051825.14 MPHOSPH9 -78226 1.69e-08 -0.257289 6e-18 schizophrenia 12_123165788 rs1615350 ENSG00000150967.17 ABCB9 184218 1.17e-06 -0.366749 6e-18 schizophrenia 12_123165788 rs1615350 ENSG00000111328.6 CDK2AP1 -106546 9.63e-07 0.24339 4e-12 schizophrenia 12_123165788 rs1615350 ENSG00000051825.14 MPHOSPH9 -78226 1.69e-08 -0.257289 4e-12 schizophrenia 12_123165788 rs1615350 ENSG00000150967.17 ABCB9 184218 1.17e-06 -0.366749 4e-12 schizophrenia 12_123165788 rs1615350 ENSG00000111328.6 CDK2AP1 -106546 9.63e-07 0.24339 1e-17 schizophrenia 12_123165788 rs1615350 ENSG00000051825.14 MPHOSPH9 -78226 1.69e-08 -0.257289 1e-17 schizophrenia 12_123165788 rs1615350 ENSG00000150967.17 ABCB9 184218 1.17e-06 -0.366749 1e-17 schizophrenia 12_123180566 rs2851447 ENSG00000150967.17 ABCB9 198996 6.33e-07 -0.358848 2e-14 schizophrenia 12_123180566 rs2851447 ENSG00000051825.14 MPHOSPH9 -63448 2.44e-07 -0.2274 2e-14 schizophrenia 12_123180566 rs2851447 ENSG00000111328.6 CDK2AP1 -91768 3.49e-06 0.221539 2e-14 schizophrenia 12_123180566 rs2851447 ENSG00000150967.17 ABCB9 198996 6.33e-07 -0.358848 1e-09 schizophrenia 12_123180566 rs2851447 ENSG00000051825.14 MPHOSPH9 -63448 2.44e-07 -0.2274 1e-09 schizophrenia 12_123180566 rs2851447 ENSG00000111328.6 CDK2AP1 -91768 3.49e-06 0.221539 1e-09 schizophrenia 12_123180566 rs2851447 ENSG00000150967.17 ABCB9 198996 6.33e-07 -0.358848 8e-12 schizophrenia 12_123180566 rs2851447 ENSG00000051825.14 MPHOSPH9 -63448 2.44e-07 -0.2274 8e-12 schizophrenia 12_123180566 rs2851447 ENSG00000111328.6 CDK2AP1 -91768 3.49e-06 0.221539 8e-12 schizophrenia 12_123180566 rs2851447 ENSG00000150967.17 ABCB9 198996 6.33e-07 -0.358848 1e-09 schizophrenia 12_123180566 rs2851447 ENSG00000051825.14 MPHOSPH9 -63448 2.44e-07 -0.2274 1e-09 schizophrenia 12_123180566 rs2851447 ENSG00000111328.6 CDK2AP1 -91768 3.49e-06 0.221539 1e-09 schizophrenia 12_123180566 rs2851447 ENSG00000150967.17 ABCB9 198996 6.33e-07 -0.358848 6e-16 schizophrenia 12_123180566 rs2851447 ENSG00000051825.14 MPHOSPH9 -63448 2.44e-07 -0.2274 6e-16 schizophrenia 12_123180566 rs2851447 ENSG00000111328.6 CDK2AP1 -91768 3.49e-06 0.221539 6e-16 schizophrenia 12_123184688 rs1790135 ENSG00000111328.6 CDK2AP1 -87646 2.32e-06 0.230721 2e-09 schizophrenia 12_123184688 rs1790135 ENSG00000051825.14 MPHOSPH9 -59326 1.14e-07 -0.238643 2e-09 schizophrenia 12_123184688 rs1790135 ENSG00000150967.17 ABCB9 203118 6.31e-07 -0.367635 2e-09 schizophrenia 12_123192216 rs2102949 ENSG00000051825.14 MPHOSPH9 -51798 9.28e-08 -0.24506 2e-14 schizophrenia 12_123192216 rs2102949 ENSG00000111328.6 CDK2AP1 -80118 1.42e-06 0.239946 2e-14 schizophrenia 12_123192216 rs2102949 ENSG00000150967.17 ABCB9 210646 2.81e-06 -0.354578 2e-14 schizophrenia 12_123192216 rs2102949 ENSG00000051825.14 MPHOSPH9 -51798 9.28e-08 -0.24506 2e-11 schizophrenia 12_123192216 rs2102949 ENSG00000111328.6 CDK2AP1 -80118 1.42e-06 0.239946 2e-11 schizophrenia 12_123192216 rs2102949 ENSG00000150967.17 ABCB9 210646 2.81e-06 -0.354578 2e-11 schizophrenia 12_123192216 rs2102949 ENSG00000051825.14 MPHOSPH9 -51798 9.28e-08 -0.24506 1e-12 schizophrenia 12_123192216 rs2102949 ENSG00000111328.6 CDK2AP1 -80118 1.42e-06 0.239946 1e-12 schizophrenia 12_123192216 rs2102949 ENSG00000150967.17 ABCB9 210646 2.81e-06 -0.354578 1e-12 schizophrenia 12_123192216 rs2102949 ENSG00000051825.14 MPHOSPH9 -51798 9.28e-08 -0.24506 2e-13 schizophrenia 12_123192216 rs2102949 ENSG00000111328.6 CDK2AP1 -80118 1.42e-06 0.239946 2e-13 schizophrenia 12_123192216 rs2102949 ENSG00000150967.17 ABCB9 210646 2.81e-06 -0.354578 2e-13 schizophrenia 12_123197534 rs1716180 ENSG00000051825.14 MPHOSPH9 -46480 1.14e-07 -0.238643 2e-23 schizophrenia 12_123197534 rs1716180 ENSG00000111328.6 CDK2AP1 -74800 2.32e-06 0.230721 2e-23 schizophrenia 12_123197534 rs1716180 ENSG00000150967.17 ABCB9 215964 6.31e-07 -0.367635 2e-23 schizophrenia 12_123246876 rs11532322 ENSG00000051825.14 MPHOSPH9 2862 2.48e-07 -0.230061 2e-08 schizophrenia 12_123246876 rs11532322 ENSG00000111328.6 CDK2AP1 -25458 2.05e-06 0.229084 2e-08 schizophrenia 12_123246876 rs11532322 ENSG00000150967.17 ABCB9 265306 9.86e-07 -0.35748 2e-08 schizophrenia 12_123930906 rs10846580 ENSG00000250091.2 DNAH10OS -4078 5.37e-06 0.309712 1e-08 schizophrenia 12_56055651 rs7302200 ENSG00000197728.9 RPS26 13798 2.53e-18 0.825268 1e-14 schizophrenia 12_56055651 rs7302200 ENSG00000139531.12 SUOX 58471 2.3e-05 -0.254046 1e-14 schizophrenia 13_114134675 rs3812831 ENSG00000130177.14 CDC16 -100212 1.17e-05 -0.229656 1e-06 schizophrenia 13_43898119 rs7321596 ENSG00000151773.12 CCDC122 23192 4.3e-08 -0.513313 3e-08 schizophrenia 13_49605318 rs7322886 ENSG00000136144.11 RCBTB1 19735 4.82e-06 0.251102 2e-08 schizophrenia 14_103345983 rs12432904 ENSG00000259775.1 EIF5-DT 13616 1.22e-06 0.456523 4e-06 schizophrenia 14_103629694 rs61637848 ENSG00000126215.13 XRCC3 -85810 2.59e-06 0.261356 3e-12 schizophrenia 14_22912771 rs9989230 ENSG00000092036.18 HAUS4 -44390 6.43e-13 -0.556847 4e-12 schizophrenia 14_35069925 rs79403677 ENSG00000100890.15 PRORP -51921 2.18e-06 0.353094 2e-08 schizophrenia 14_35150610 rs11156875 ENSG00000100890.15 PRORP 28764 1.44e-05 0.298103 3e-07 schizophrenia 14_59498575 rs111803315 ENSG00000050130.17 JKAMP 14132 6.22e-05 0.324275 3e-06 schizophrenia 14_59498575 rs111803315 ENSG00000126790.11 L3HYPDH 14145 7.11e-10 -0.810085 3e-06 schizophrenia 14_70894697 rs989501 ENSG00000100731.15 PCNX1 -12708 6.22e-10 0.354837 1e-11 schizophrenia 14_70907985 rs2526882 ENSG00000100731.15 PCNX1 580 1.55e-11 0.387216 2e-07 schizophrenia 14_70907985 rs2526882 ENSG00000100731.15 PCNX1 580 1.55e-11 0.387216 1e-06 schizophrenia 14_70921681 rs2189806 ENSG00000100731.15 PCNX1 14276 7.22e-11 0.388387 5e-10 schizophrenia 14_71134362 rs221902 ENSG00000100731.15 PCNX1 226957 2.5e-10 0.369171 4e-08 schizophrenia 14_74910852 rs2003490 ENSG00000198208.11 RPS6KL1 -12544 1.44e-06 0.33988 2e-08 schizophrenia 15_43958115 rs2929278 ENSG00000166763.7 STRCP1 239931 4.65e-05 0.355159 6e-06 schizophrenia 15_43965756 rs2957582 ENSG00000166763.7 STRCP1 247572 3.39e-05 0.360671 2e-08 schizophrenia 15_82558175 rs17507216 ENSG00000278662.4 GOLGA6L10 208700 7.09e-17 -1.03936 4e-10 schizophrenia 15_82558175 rs17507216 ENSG00000103723.12 AP3B2 -151739 2.48e-07 0.453982 4e-10 schizophrenia 15_84037709 rs950169 ENSG00000197696.9 NMB -620854 5.32e-07 -0.420761 3e-11 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 4.5e-05 -0.443226 3e-11 schizophrenia 15_84037709 rs950169 ENSG00000197696.9 NMB -620854 5.32e-07 -0.420761 2e-11 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 4.5e-05 -0.443226 2e-11 schizophrenia 15_84037709 rs950169 ENSG00000197696.9 NMB -620854 5.32e-07 -0.420761 5e-12 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 4.5e-05 -0.443226 5e-12 schizophrenia 15_84037709 rs950169 ENSG00000197696.9 NMB -620854 5.32e-07 -0.420761 1e-10 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 4.5e-05 -0.443226 1e-10 schizophrenia 15_84037709 rs950169 ENSG00000197696.9 NMB -620854 5.32e-07 -0.420761 2e-11 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 4.5e-05 -0.443226 2e-11 schizophrenia 15_84137308 rs66486766 ENSG00000197696.9 NMB -521255 9.68e-08 -0.437898 1e-11 schizophrenia 15_84137308 rs66486766 ENSG00000225151.10 GOLGA2P7 -92828 8.17e-05 -0.422116 1e-11 schizophrenia 15_84137308 rs66486766 ENSG00000197696.9 NMB -521255 9.68e-08 -0.437898 5e-11 schizophrenia 15_84137308 rs66486766 ENSG00000225151.10 GOLGA2P7 -92828 8.17e-05 -0.422116 5e-11 schizophrenia 15_84562751 rs12902973 ENSG00000259295.6 CSPG4P12 -628687 6.01e-06 0.503957 9e-11 schizophrenia 15_84562751 rs12902973 ENSG00000197696.9 NMB -95812 5.51e-09 -0.463153 9e-11 schizophrenia 15_84562751 rs12902973 ENSG00000259295.6 CSPG4P12 -628687 6.01e-06 0.503957 4e-10 schizophrenia 15_84562751 rs12902973 ENSG00000197696.9 NMB -95812 5.51e-09 -0.463153 4e-10 schizophrenia 15_84581411 rs11633534 ENSG00000259295.6 CSPG4P12 -610027 6.01e-06 0.503957 8e-14 schizophrenia 15_84581411 rs11633534 ENSG00000197696.9 NMB -77152 5.51e-09 -0.463153 8e-14 schizophrenia 15_84594463 rs11638445 ENSG00000225151.10 GOLGA2P7 364327 2.73e-05 -0.446175 3e-10 schizophrenia 15_84594463 rs11638445 ENSG00000259295.6 CSPG4P12 -596975 1.29e-05 0.496627 3e-10 schizophrenia 15_84594463 rs11638445 ENSG00000197696.9 NMB -64100 4.89e-09 -0.473713 3e-10 schizophrenia 15_84606344 rs748455 ENSG00000259295.6 CSPG4P12 -585094 2.35e-07 0.549853 6e-13 schizophrenia 15_84606344 rs748455 ENSG00000225151.10 GOLGA2P7 376208 4.64e-05 -0.411207 6e-13 schizophrenia 15_84606344 rs748455 ENSG00000197696.9 NMB -52219 3.79e-11 -0.498761 6e-13 schizophrenia 15_84664594 rs12908161 ENSG00000259295.6 CSPG4P12 -526844 1.23e-06 0.525782 5e-10 schizophrenia 15_84664594 rs12908161 ENSG00000197696.9 NMB 6031 1.5e-10 -0.491765 5e-10 schizophrenia 15_84664594 rs12908161 ENSG00000259295.6 CSPG4P12 -526844 1.23e-06 0.525782 9e-10 schizophrenia 15_84664594 rs12908161 ENSG00000197696.9 NMB 6031 1.5e-10 -0.491765 9e-10 schizophrenia 15_84806000 rs35630683 ENSG00000197696.9 NMB 147437 9.74e-10 -0.474518 5e-09 schizophrenia 15_84806000 rs35630683 ENSG00000259295.6 CSPG4P12 -385438 1.75e-06 0.520977 5e-09 schizophrenia 15_84812610 rs35828350 ENSG00000259295.6 CSPG4P12 -378828 1.75e-06 0.520977 6e-11 schizophrenia 15_84812610 rs35828350 ENSG00000197696.9 NMB 154047 9.74e-10 -0.474518 6e-11 schizophrenia 15_90879313 rs8039305 ENSG00000182511.11 FES -4382 5.62e-06 -0.213382 5e-11 schizophrenia 16_11983775 rs12922317 ENSG00000234719.8 NPIPB2 7132 8.84e-24 0.901462 9e-07 schizophrenia 16_15062041 rs2966157 ENSG00000183793.13 NPIPA5 -319006 3.58e-05 0.515483 6e-11 schizophrenia 16_15062041 rs2966157 ENSG00000188599.17 NPIPP1 -61457 3.89e-05 -0.244971 6e-11 schizophrenia 16_20668884 rs433598 ENSG00000166743.9 ACSM1 -30006 2.3e-06 0.386096 3e-06 schizophrenia 16_23629146 rs249954 ENSG00000166847.9 DCTN5 -12246 3.08e-15 0.607957 2e-06 schizophrenia 16_28874338 rs7359397 ENSG00000259982.1 CDC37P1 172798 6.34e-13 0.721304 7e-11 schizophrenia 16_28874338 rs7359397 ENSG00000196993.8 NPIPB9 122551 5.04e-05 -0.406705 7e-11 schizophrenia 16_28874338 rs7359397 ENSG00000178952.10 TUFM 27930 2.15e-08 0.154255 7e-11 schizophrenia 16_28874338 rs7359397 ENSG00000188322.4 SBK1 581819 5.72e-05 -0.226271 7e-11 schizophrenia 16_29928556 rs12691307 ENSG00000169592.14 INO80E -66738 5.11e-08 -0.350848 2e-10 schizophrenia 16_29928556 rs12691307 ENSG00000169592.14 INO80E -66738 5.11e-08 -0.350848 5e-10 schizophrenia 16_29928556 rs12691307 ENSG00000169592.14 INO80E -66738 5.11e-08 -0.350848 4e-10 schizophrenia 16_29928556 rs12691307 ENSG00000169592.14 INO80E -66738 5.11e-08 -0.350848 2e-10 schizophrenia 16_29928556 rs12691307 ENSG00000169592.14 INO80E -66738 5.11e-08 -0.350848 5e-11 schizophrenia 16_29946895 rs8054556 ENSG00000149927.17 DOC2A -76375 3.5e-06 -0.293774 4e-11 schizophrenia 16_29946895 rs8054556 ENSG00000169592.14 INO80E -48399 2.01e-14 -0.473828 4e-11 schizophrenia 16_29946895 rs8054556 ENSG00000149927.17 DOC2A -76375 3.5e-06 -0.293774 4e-10 schizophrenia 16_29946895 rs8054556 ENSG00000169592.14 INO80E -48399 2.01e-14 -0.473828 4e-10 schizophrenia 16_29954956 rs11646127 ENSG00000149927.17 DOC2A -68314 1.04e-05 -0.276091 6e-13 schizophrenia 16_29954956 rs11646127 ENSG00000090238.11 YPEL3 -141288 7.65e-05 0.14807 6e-13 schizophrenia 16_29954956 rs11646127 ENSG00000169592.14 INO80E -40338 2.44e-13 -0.45063 6e-13 schizophrenia 16_29983601 rs3814883 ENSG00000169592.14 INO80E -11693 6.99e-10 -0.391625 2e-09 schizophrenia 16_29983601 rs3814883 ENSG00000169592.14 INO80E -11693 6.99e-10 -0.391625 7e-12 schizophrenia 16_29989580 rs3814881 ENSG00000149927.17 DOC2A -33690 1.03e-05 -0.278661 8e-13 schizophrenia 16_29989580 rs3814881 ENSG00000169592.14 INO80E -5714 3.98e-14 -0.466611 8e-13 schizophrenia 16_29989580 rs3814881 ENSG00000149927.17 DOC2A -33690 1.03e-05 -0.278661 4e-12 schizophrenia 16_29989580 rs3814881 ENSG00000169592.14 INO80E -5714 3.98e-14 -0.466611 4e-12 schizophrenia 16_29989580 rs3814881 ENSG00000149927.17 DOC2A -33690 1.03e-05 -0.278661 7e-12 schizophrenia 16_29989580 rs3814881 ENSG00000169592.14 INO80E -5714 3.98e-14 -0.466611 7e-12 schizophrenia 16_4419283 rs13335685 ENSG00000153406.13 NMRAL1 -76480 4.47e-08 -0.416466 6e-10 schizophrenia 16_4420026 rs6500596 ENSG00000153406.13 NMRAL1 -75737 1.44e-10 -0.502173 5e-09 schizophrenia 16_4420026 rs6500596 ENSG00000153406.13 NMRAL1 -75737 1.44e-10 -0.502173 2e-07 schizophrenia 16_4420026 rs6500596 ENSG00000153406.13 NMRAL1 -75737 1.44e-10 -0.502173 1e-06 schizophrenia 16_4447450 rs6500602 ENSG00000153406.13 NMRAL1 -48313 4.49e-08 -0.429082 3e-07 schizophrenia 16_68155437 rs8044995 ENSG00000132600.16 PRMT7 -155537 8.46e-06 0.349319 2e-08 schizophrenia 16_68155437 rs8044995 ENSG00000167264.17 DUS2 167676 8.05e-05 0.217924 2e-08 schizophrenia 16_68155437 rs8044995 ENSG00000132600.16 PRMT7 -155537 8.46e-06 0.349319 4e-08 schizophrenia 16_68155437 rs8044995 ENSG00000167264.17 DUS2 167676 8.05e-05 0.217924 4e-08 schizophrenia 16_68218176 rs9928653 ENSG00000167264.17 DUS2 230415 8.95e-06 0.230436 7e-08 schizophrenia 16_68218176 rs9928653 ENSG00000132600.16 PRMT7 -92798 5.78e-05 0.300449 7e-08 schizophrenia 16_68251944 rs1975802 ENSG00000132600.16 PRMT7 -59030 3.5e-06 0.349194 4e-08 schizophrenia 16_68251944 rs1975802 ENSG00000167264.17 DUS2 264183 2.03e-05 0.225626 4e-08 schizophrenia 16_68289751 rs55757091 ENSG00000132600.16 PRMT7 -21223 5.09e-10 0.424074 3e-07 schizophrenia 16_68289751 rs55757091 ENSG00000132600.16 PRMT7 -21223 5.09e-10 0.424074 2e-07 schizophrenia 16_68289751 rs55757091 ENSG00000132600.16 PRMT7 -21223 5.09e-10 0.424074 5e-07 schizophrenia 16_68310460 rs8063446 ENSG00000132600.16 PRMT7 -514 2.79e-08 0.405586 3e-06 schizophrenia 16_69940756 rs3748386 ENSG00000255185.5 PDXDC2P -125189 1.33e-11 0.342321 6e-09 schizophrenia 17_12993236 rs9908102 ENSG00000006744.18 ELAC2 -24951 4.59e-12 0.329729 2e-06 schizophrenia 17_19333641 rs12602286 ENSG00000265185.5 SNORD3B-1 271729 2.47e-05 -0.455663 2e-08 schizophrenia 17_19333641 rs12602286 ENSG00000072134.15 EPN2 118026 4.46e-05 -0.228188 2e-08 schizophrenia 17_20009397 rs8067545 ENSG00000170298.15 LGALS9B -458142 2.24e-08 -0.269991 1e-06 schizophrenia 17_20028279 rs61257528 ENSG00000170298.15 LGALS9B -439260 1.36e-08 -0.273879 1e-08 schizophrenia 17_2221430 rs2131700 ENSG00000167720.12 SRR -81953 2.85e-14 -0.599297 2e-08 schizophrenia 17_32433299 rs62065467 ENSG00000176749.8 CDK5R1 -53320 2.77e-05 0.179636 1e-08 schizophrenia 17_36544271 rs12941866 ENSG00000278259.4 MYO19 836 8.73e-07 -0.190497 3e-08 schizophrenia 17_36544271 rs12941866 ENSG00000278311.4 GGNBP2 -617 2.8e-05 0.227066 3e-08 schizophrenia 17_36544271 rs12941866 ENSG00000273611.4 ZNHIT3 57642 3.36e-06 -0.344381 3e-08 schizophrenia 17_41993935 rs139414355 ENSG00000141698.16 NT5C3B 157672 4.32e-05 0.361559 7e-06 schizophrenia 17_41993935 rs139414355 ENSG00000141698.16 NT5C3B 157672 4.32e-05 0.361559 7e-06 schizophrenia 17_45666978 rs1635298 ENSG00000263503.1 MAPK8IP1P2 64638 5.71e-22 -0.948273 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000176681.14 LRRC37A -625755 3e-05 -0.485205 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000214425.7 LRRC37A4P 116643 2.66e-25 0.690048 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000238083.7 LRRC37A2 -844533 1.94e-13 -0.726014 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000204650.14 LINC02210 46650 7.58e-27 -0.648167 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000264070.1 DND1P1 81107 1.18e-22 -0.914466 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000214401.4 KANSL1-AS1 -526598 1.24e-23 -0.941568 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000262500.1 MAPK8IP1P1 -576628 2.94e-19 -0.818851 3e-08 schizophrenia 17_45779092 rs35076622 ENSG00000214425.7 LRRC37A4P 228757 1.54e-16 -0.578269 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000214401.4 KANSL1-AS1 -414484 6.67e-15 0.772763 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000238083.7 LRRC37A2 -732419 2.57e-07 0.527481 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000264070.1 DND1P1 193221 2.84e-13 0.723566 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000263503.1 MAPK8IP1P2 176752 1.51e-11 0.710948 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000204650.14 LINC02210 158764 1.41e-15 0.518823 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000262500.1 MAPK8IP1P1 -464514 4.61e-11 0.632585 3e-12 schizophrenia 17_46784796 rs199503 ENSG00000185829.17 ARL17A 205114 3.39e-07 0.51811 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000214401.4 KANSL1-AS1 591220 6.09e-33 1.14034 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000262500.1 MAPK8IP1P1 541190 2.6e-31 1.05546 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000238083.7 LRRC37A2 273285 3.76e-25 1.01577 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000120071.13 KANSL1 559407 2.71e-05 0.285558 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000176681.14 LRRC37A 492063 1.47e-05 0.545865 3e-09 schizophrenia 18_12947463 rs3809912 ENSG00000101639.18 CEP192 -43899 2e-29 -0.927045 1e-08 schizophrenia 18_23546117 rs4800490 ENSG00000141458.12 NPC1 -40781 6.67e-07 0.332164 1e-10 schizophrenia 18_79928124 rs55642704 ENSG00000261126.7 RBFADN -118776 2.54e-06 -0.318728 4e-11 schizophrenia 19_19629920 rs880090 ENSG00000250067.11 YJEFN3 100556 4e-07 0.327551 1e-09 schizophrenia 19_41559909 rs4803480 ENSG00000007129.17 CEACAM21 10391 3.09e-11 -0.333656 1e-07 schizophrenia 19_41559909 rs4803480 ENSG00000239736.2 CEACAMP3 -39826 4.3e-11 0.739062 1e-07 schizophrenia 19_48703346 rs281377 ENSG00000176920.11 FUT2 7375 4.61e-13 0.307841 2e-08 schizophrenia 19_48703346 rs281377 ENSG00000142233.11 NTN5 30265 2.86e-08 -0.400602 2e-08 schizophrenia 19_48704000 rs603985 ENSG00000176920.11 FUT2 8029 3.08e-14 -0.299961 3e-08 schizophrenia 19_48704000 rs603985 ENSG00000142233.11 NTN5 30919 1.29e-05 0.301384 3e-08 schizophrenia 19_49648885 rs7508148 ENSG00000126456.15 IRF3 -16256 1.59e-10 0.182126 4e-11 schizophrenia 19_49648885 rs7508148 ENSG00000104870.12 FCGRT 136606 7.49e-06 -0.185022 4e-11 schizophrenia 2_129999731 rs13020137 ENSG00000225449.3 RAB6C-AS1 20068 3.94e-09 0.410773 5e-06 schizophrenia 2_129999731 rs13020137 ENSG00000214100.8 PLAC9P1 65414 3.82e-05 0.336656 5e-06 schizophrenia 2_171928495 rs9784123 ENSG00000077380.15 DYNC1I2 241086 2.11e-06 -0.152114 3e-08 schizophrenia 2_197318216 rs4850788 ENSG00000231621.1 ANKRD44-AS1 120225 2.79e-11 0.390489 5e-09 schizophrenia 2_197393071 rs4685 ENSG00000231621.1 ANKRD44-AS1 195080 3.04e-07 -0.297463 2e-11 schizophrenia 2_197393071 rs4685 ENSG00000115524.15 SF3B1 -42020 2.39e-05 -0.133226 2e-11 schizophrenia 2_197393071 rs4685 ENSG00000231621.1 ANKRD44-AS1 195080 3.04e-07 -0.297463 8e-12 schizophrenia 2_197393071 rs4685 ENSG00000115524.15 SF3B1 -42020 2.39e-05 -0.133226 8e-12 schizophrenia 2_197428967 rs788021 ENSG00000231621.1 ANKRD44-AS1 230976 1.13e-07 -0.306232 1e-09 schizophrenia 2_197428967 rs788021 ENSG00000115524.15 SF3B1 -6124 2.25e-05 -0.133268 1e-09 schizophrenia 2_197439853 rs6434928 ENSG00000115524.15 SF3B1 4762 1.56e-05 -0.136048 1e-11 schizophrenia 2_197439853 rs6434928 ENSG00000231621.1 ANKRD44-AS1 241862 1.22e-07 -0.306348 1e-11 schizophrenia 2_197439853 rs6434928 ENSG00000115524.15 SF3B1 4762 1.56e-05 -0.136048 3e-11 schizophrenia 2_197439853 rs6434928 ENSG00000231621.1 ANKRD44-AS1 241862 1.22e-07 -0.306348 3e-11 schizophrenia 2_197439853 rs6434928 ENSG00000115524.15 SF3B1 4762 1.56e-05 -0.136048 8e-12 schizophrenia 2_197439853 rs6434928 ENSG00000231621.1 ANKRD44-AS1 241862 1.22e-07 -0.306348 8e-12 schizophrenia 2_197439853 rs6434928 ENSG00000115524.15 SF3B1 4762 1.56e-05 -0.136048 2e-10 schizophrenia 2_197439853 rs6434928 ENSG00000231621.1 ANKRD44-AS1 241862 1.22e-07 -0.306348 2e-10 schizophrenia 2_197439853 rs6434928 ENSG00000115524.15 SF3B1 4762 1.56e-05 -0.136048 5e-11 schizophrenia 2_197439853 rs6434928 ENSG00000231621.1 ANKRD44-AS1 241862 1.22e-07 -0.306348 5e-11 schizophrenia 2_197439853 rs6434928 ENSG00000115524.15 SF3B1 4762 1.56e-05 -0.136048 2e-11 schizophrenia 2_197439853 rs6434928 ENSG00000231621.1 ANKRD44-AS1 241862 1.22e-07 -0.306348 2e-11 schizophrenia 2_197439853 rs6434928 ENSG00000115524.15 SF3B1 4762 1.56e-05 -0.136048 4e-13 schizophrenia 2_197439853 rs6434928 ENSG00000231621.1 ANKRD44-AS1 241862 1.22e-07 -0.306348 4e-13 schizophrenia 2_197439853 rs6434928 ENSG00000115524.15 SF3B1 4762 1.56e-05 -0.136048 2e-09 schizophrenia 2_197439853 rs6434928 ENSG00000231621.1 ANKRD44-AS1 241862 1.22e-07 -0.306348 2e-09 schizophrenia 2_197510605 rs7605813 ENSG00000231621.1 ANKRD44-AS1 312614 3.16e-07 -0.302244 5e-12 schizophrenia 2_197510605 rs7605813 ENSG00000115524.15 SF3B1 75514 9.86e-06 -0.141365 5e-12 schizophrenia 2_197942291 rs1518367 ENSG00000231621.1 ANKRD44-AS1 744300 3.08e-05 -0.269806 1e-11 schizophrenia 2_232697487 rs4144797 ENSG00000115474.6 KCNJ13 -79081 5.68e-06 -0.192285 1e-10 schizophrenia 2_232697487 rs4144797 ENSG00000115474.6 KCNJ13 -79081 5.68e-06 -0.192285 5e-15 schizophrenia 2_232697487 rs4144797 ENSG00000115474.6 KCNJ13 -79081 5.68e-06 -0.192285 4e-16 schizophrenia 2_232727791 rs6704768 ENSG00000115474.6 KCNJ13 -48777 5.14e-07 -0.200017 1e-14 schizophrenia 2_232727791 rs6704768 ENSG00000115474.6 KCNJ13 -48777 5.14e-07 -0.200017 6e-10 schizophrenia 2_232727791 rs6704768 ENSG00000115474.6 KCNJ13 -48777 5.14e-07 -0.200017 2e-08 schizophrenia 2_232727791 rs6704768 ENSG00000115474.6 KCNJ13 -48777 5.14e-07 -0.200017 3e-10 schizophrenia 2_232727791 rs6704768 ENSG00000115474.6 KCNJ13 -48777 5.14e-07 -0.200017 2e-12 schizophrenia 2_232727791 rs6704768 ENSG00000115474.6 KCNJ13 -48777 5.14e-07 -0.200017 3e-17 schizophrenia 2_232728789 rs17164 ENSG00000115474.6 KCNJ13 -47779 9.56e-07 -0.210041 5e-12 schizophrenia 2_232871534 rs2675968 ENSG00000115474.6 KCNJ13 94966 2.45e-05 0.179559 5e-06 schizophrenia 2_37323760 rs7584565 ENSG00000115825.9 PRKD3 -1048 1.04e-07 -0.19038 9e-09 schizophrenia 2_37334786 rs2372993 ENSG00000115816.14 CEBPZ 103156 1.22e-05 -0.21815 5e-07 schizophrenia 2_37334786 rs2372993 ENSG00000115825.9 PRKD3 9978 1.22e-07 -0.183273 5e-07 schizophrenia 2_37334786 rs2372993 ENSG00000115816.14 CEBPZ 103156 1.22e-05 -0.21815 7e-07 schizophrenia 2_37334786 rs2372993 ENSG00000115825.9 PRKD3 9978 1.22e-07 -0.183273 7e-07 schizophrenia 2_47993197 rs17396122 ENSG00000170802.15 FOXN2 -321440 1.17e-11 0.835985 1e-06 schizophrenia 2_48153579 rs12475492 ENSG00000170802.15 FOXN2 -161058 9.76e-13 0.791538 6e-09 schizophrenia 2_73334357 rs7560272 ENSG00000163016.9 ALMS1P1 -310562 2.93e-06 0.511189 1e-07 schizophrenia 2_73334357 rs7560272 ENSG00000163016.9 ALMS1P1 -310562 2.93e-06 0.511189 6e-07 schizophrenia 2_73404436 rs11899902 ENSG00000163016.9 ALMS1P1 -240483 2.31e-10 0.652017 5e-08 schizophrenia 2_96835038 rs78381888 ENSG00000115073.7 ACTR1B -829069 5.77e-09 0.576146 2e-07 schizophrenia 2_96835038 rs78381888 ENSG00000230606.10 LINC02969 -598489 7.04e-05 -0.423993 2e-07 schizophrenia 20_48907328 rs6095357 ENSG00000124207.16 CSE1L -138918 3.05e-06 -0.204509 7e-06 schizophrenia 20_49136728 rs11696888 ENSG00000124207.16 CSE1L 90482 3.58e-08 0.218829 1e-09 schizophrenia 20_49169653 rs348276 ENSG00000124198.8 ARFGEF2 247763 2.02e-06 -0.137006 5e-09 schizophrenia 20_49169653 rs348276 ENSG00000124207.16 CSE1L 123407 8.01e-07 -0.192356 5e-09 schizophrenia 21_37221319 rs13864 ENSG00000182670.13 TTC3 148093 9.8e-08 0.324661 8e-06 schizophrenia 21_37221319 rs13864 ENSG00000185808.13 PIGP 148149 1.05e-06 -0.27513 8e-06 schizophrenia 22_41944504 rs1023497 ENSG00000205702.10 CYP2D7 -200073 5.29e-08 -0.410558 9e-09 schizophrenia 22_41944504 rs1023497 ENSG00000226450.2 CYP2D8P -210497 5.6e-05 -0.295947 9e-09 schizophrenia 22_41944504 rs1023497 ENSG00000183172.8 SMDT1 -135187 6.91e-08 -0.487804 9e-09 schizophrenia 22_41944840 rs1023500 ENSG00000183172.8 SMDT1 -134851 6.01e-08 -0.491826 3e-08 schizophrenia 22_41944840 rs1023500 ENSG00000226450.2 CYP2D8P -210161 5.3e-05 -0.298038 3e-08 schizophrenia 22_41944840 rs1023500 ENSG00000205702.10 CYP2D7 -199737 2.02e-08 -0.423586 3e-08 schizophrenia 22_41944840 rs1023500 ENSG00000183172.8 SMDT1 -134851 6.01e-08 -0.491826 8e-09 schizophrenia 22_41944840 rs1023500 ENSG00000226450.2 CYP2D8P -210161 5.3e-05 -0.298038 8e-09 schizophrenia 22_41944840 rs1023500 ENSG00000205702.10 CYP2D7 -199737 2.02e-08 -0.423586 8e-09 schizophrenia 22_42141587 rs1800754 ENSG00000100197.20 CYP2D6 10681 9.01e-13 0.346558 2e-15 schizophrenia 22_42141587 rs1800754 ENSG00000183172.8 SMDT1 61896 1.01e-10 -0.515931 2e-15 schizophrenia 22_42141587 rs1800754 ENSG00000235513.1 L3MBTL2-AS1 923960 1.02e-05 -0.28052 2e-15 schizophrenia 22_42175022 rs760648 ENSG00000182057.4 OGFRP1 -94731 1.37e-05 0.383691 3e-08 schizophrenia 22_42175022 rs760648 ENSG00000235513.1 L3MBTL2-AS1 957395 2.63e-05 0.284201 3e-08 schizophrenia 22_42175022 rs760648 ENSG00000183172.8 SMDT1 95331 1.46e-07 0.456309 3e-08 schizophrenia 22_42175022 rs760648 ENSG00000182057.4 OGFRP1 -94731 1.37e-05 0.383691 1e-11 schizophrenia 22_42175022 rs760648 ENSG00000235513.1 L3MBTL2-AS1 957395 2.63e-05 0.284201 1e-11 schizophrenia 22_42175022 rs760648 ENSG00000183172.8 SMDT1 95331 1.46e-07 0.456309 1e-11 schizophrenia 22_42175022 rs760648 ENSG00000182057.4 OGFRP1 -94731 1.37e-05 0.383691 5e-09 schizophrenia 22_42175022 rs760648 ENSG00000235513.1 L3MBTL2-AS1 957395 2.63e-05 0.284201 5e-09 schizophrenia 22_42175022 rs760648 ENSG00000183172.8 SMDT1 95331 1.46e-07 0.456309 5e-09 schizophrenia 22_42175022 rs760648 ENSG00000182057.4 OGFRP1 -94731 1.37e-05 0.383691 1e-08 schizophrenia 22_42175022 rs760648 ENSG00000235513.1 L3MBTL2-AS1 957395 2.63e-05 0.284201 1e-08 schizophrenia 22_42175022 rs760648 ENSG00000183172.8 SMDT1 95331 1.46e-07 0.456309 1e-08 schizophrenia 22_42175022 rs760648 ENSG00000182057.4 OGFRP1 -94731 1.37e-05 0.383691 1e-10 schizophrenia 22_42175022 rs760648 ENSG00000235513.1 L3MBTL2-AS1 957395 2.63e-05 0.284201 1e-10 schizophrenia 22_42175022 rs760648 ENSG00000183172.8 SMDT1 95331 1.46e-07 0.456309 1e-10 schizophrenia 22_42207808 rs6002655 ENSG00000235513.1 L3MBTL2-AS1 990181 1.86e-05 0.280238 2e-09 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 7.77e-07 -0.258321 2e-09 schizophrenia 22_42207808 rs6002655 ENSG00000183172.8 SMDT1 128117 6.76e-05 0.342457 2e-09 schizophrenia 22_42207808 rs6002655 ENSG00000235513.1 L3MBTL2-AS1 990181 1.86e-05 0.280238 5e-10 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 7.77e-07 -0.258321 5e-10 schizophrenia 22_42207808 rs6002655 ENSG00000183172.8 SMDT1 128117 6.76e-05 0.342457 5e-10 schizophrenia 22_42207808 rs6002655 ENSG00000235513.1 L3MBTL2-AS1 990181 1.86e-05 0.280238 1e-08 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 7.77e-07 -0.258321 1e-08 schizophrenia 22_42207808 rs6002655 ENSG00000183172.8 SMDT1 128117 6.76e-05 0.342457 1e-08 schizophrenia 22_42207808 rs6002655 ENSG00000235513.1 L3MBTL2-AS1 990181 1.86e-05 0.280238 2e-14 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 7.77e-07 -0.258321 2e-14 schizophrenia 22_42207808 rs6002655 ENSG00000183172.8 SMDT1 128117 6.76e-05 0.342457 2e-14 schizophrenia 22_42207808 rs6002655 ENSG00000235513.1 L3MBTL2-AS1 990181 1.86e-05 0.280238 6e-10 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 7.77e-07 -0.258321 6e-10 schizophrenia 22_42207808 rs6002655 ENSG00000183172.8 SMDT1 128117 6.76e-05 0.342457 6e-10 schizophrenia 22_42207808 rs6002655 ENSG00000235513.1 L3MBTL2-AS1 990181 1.86e-05 0.280238 1e-09 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 7.77e-07 -0.258321 1e-09 schizophrenia 22_42207808 rs6002655 ENSG00000183172.8 SMDT1 128117 6.76e-05 0.342457 1e-09 schizophrenia 22_42207808 rs6002655 ENSG00000235513.1 L3MBTL2-AS1 990181 1.86e-05 0.280238 2e-09 schizophrenia 22_42207808 rs6002655 ENSG00000100197.20 CYP2D6 76902 7.77e-07 -0.258321 2e-09 schizophrenia 22_42207808 rs6002655 ENSG00000183172.8 SMDT1 128117 6.76e-05 0.342457 2e-09 schizophrenia 3_10373659 rs9879311 ENSG00000240288.7 GHRLOS 85714 1.63e-05 0.40961 5e-06 schizophrenia 3_10373659 rs9879311 ENSG00000240288.7 GHRLOS 85714 1.63e-05 0.40961 2e-08 schizophrenia 3_136095167 rs1278493 ENSG00000114054.13 PCCB -155139 6.74e-05 -0.151519 1e-08 schizophrenia 3_147221219 rs6440475 ENSG00000152977.9 ZIC1 -172203 1.6e-05 0.403293 6e-06 schizophrenia 3_38396881 rs1858740 ENSG00000157036.12 EXOG -99246 3.06e-05 -0.278512 5e-06 schizophrenia 3_44383347 rs4682973 ENSG00000144792.9 ZNF660 -194876 9.86e-06 0.295899 4e-08 schizophrenia 3_47860313 rs7429990 ENSG00000164048.13 ZNF589 -380787 3.13e-05 0.222459 3e-09 schizophrenia 3_47860313 rs7429990 ENSG00000229759.1 MRPS18AP1 -396273 0.000126461 0.27114 3e-09 schizophrenia 3_50002761 rs4688756 ENSG00000004534.14 RBM6 62754 1.05e-28 -0.622071 2e-17 schizophrenia 3_50002761 rs4688756 ENSG00000173540.12 GMPPB 278810 0.000176969 0.109899 2e-17 schizophrenia 3_50002761 rs4688756 ENSG00000182179.12 UBA7 188815 6.76e-06 -0.155335 2e-17 schizophrenia 3_52234850 rs353547 ENSG00000168268.10 NT5DC2 -300204 5.02e-05 0.229139 4e-08 schizophrenia 3_52234850 rs353547 ENSG00000055955.15 ITIH4 -595889 3.2e-05 -0.232186 4e-08 schizophrenia 3_52253452 rs11717383 ENSG00000168268.10 NT5DC2 -281602 6.79e-07 -0.267021 3e-09 schizophrenia 3_52594040 rs2577831 ENSG00000168268.10 NT5DC2 58986 2.36e-06 -0.252719 9e-10 schizophrenia 3_52594040 rs2577831 ENSG00000168268.10 NT5DC2 58986 2.36e-06 -0.252719 5e-13 schizophrenia 3_52594040 rs2577831 ENSG00000168268.10 NT5DC2 58986 2.36e-06 -0.252719 2e-13 schizophrenia 3_52594040 rs2577831 ENSG00000168268.10 NT5DC2 58986 2.36e-06 -0.252719 3e-14 schizophrenia 3_52781889 rs2710323 ENSG00000168268.10 NT5DC2 246835 2.72e-06 -0.256473 9e-10 schizophrenia 3_52781889 rs2710323 ENSG00000168268.10 NT5DC2 246835 2.72e-06 -0.256473 7e-13 schizophrenia 3_52781889 rs2710323 ENSG00000168268.10 NT5DC2 246835 2.72e-06 -0.256473 3e-08 schizophrenia 3_52799203 rs2535629 ENSG00000168268.10 NT5DC2 264149 9.44e-05 -0.214451 2e-11 schizophrenia 3_52799203 rs2535629 ENSG00000163938.16 GNL3 118047 6.23e-05 -0.133297 2e-11 schizophrenia 3_52799203 rs2535629 ENSG00000055955.15 ITIH4 -31536 7.92e-07 0.263896 2e-11 schizophrenia 3_52799203 rs2535629 ENSG00000168268.10 NT5DC2 264149 9.44e-05 -0.214451 3e-12 schizophrenia 3_52799203 rs2535629 ENSG00000163938.16 GNL3 118047 6.23e-05 -0.133297 3e-12 schizophrenia 3_52799203 rs2535629 ENSG00000055955.15 ITIH4 -31536 7.92e-07 0.263896 3e-12 schizophrenia 3_52799789 rs3617 ENSG00000168268.10 NT5DC2 264735 3.3e-06 -0.258224 1e-11 schizophrenia 3_52799789 rs3617 ENSG00000168268.10 NT5DC2 264735 3.3e-06 -0.258224 3e-12 schizophrenia 3_52799789 rs3617 ENSG00000168268.10 NT5DC2 264735 3.3e-06 -0.258224 1e-10 schizophrenia 3_52803777 rs4481150 ENSG00000168268.10 NT5DC2 268723 8.62e-07 -0.266851 5e-17 schizophrenia 3_52803777 rs4481150 ENSG00000168268.10 NT5DC2 268723 8.62e-07 -0.266851 4e-09 schizophrenia 3_52803777 rs4481150 ENSG00000168268.10 NT5DC2 268723 8.62e-07 -0.266851 2e-12 schizophrenia 3_52803777 rs4481150 ENSG00000168268.10 NT5DC2 268723 8.62e-07 -0.266851 1e-13 schizophrenia 3_52804386 rs4687552 ENSG00000055955.15 ITIH4 -26353 2.28e-09 0.31118 1e-08 schizophrenia 3_52804386 rs4687552 ENSG00000168268.10 NT5DC2 269332 3.16e-06 -0.251496 1e-08 schizophrenia 3_52811089 rs2535627 ENSG00000168268.10 NT5DC2 276035 6.14e-07 -0.274053 2e-11 schizophrenia 3_52811089 rs2535627 ENSG00000168268.10 NT5DC2 276035 6.14e-07 -0.274053 3e-07 schizophrenia 3_52811089 rs2535627 ENSG00000168268.10 NT5DC2 276035 6.14e-07 -0.274053 4e-08 schizophrenia 3_52811089 rs2535627 ENSG00000168268.10 NT5DC2 276035 6.14e-07 -0.274053 4e-11 schizophrenia 3_52811089 rs2535627 ENSG00000168268.10 NT5DC2 276035 6.14e-07 -0.274053 8e-11 schizophrenia 3_52821213 rs2239547 ENSG00000163933.9 RFT1 -309249 3.48e-09 -0.449622 6e-08 schizophrenia 3_52821213 rs2239547 ENSG00000055955.15 ITIH4 -9526 8.92e-11 0.351342 6e-08 schizophrenia 3_53002190 rs2581794 ENSG00000242142.1 SERBP1P3 -62901 2.92e-06 0.421198 3e-07 schizophrenia 3_53108964 rs2115780 ENSG00000163933.9 RFT1 -21498 1.36e-05 -0.372942 4e-08 schizophrenia 3_53108964 rs2115780 ENSG00000242142.1 SERBP1P3 43873 2.12e-05 0.460071 4e-08 schizophrenia 3_88155583 rs9815738 ENSG00000179021.9 C3orf38 5697 6.95e-06 0.381611 7e-07 schizophrenia 4_102859339 rs223346 ENSG00000230069.3 LRRC37A15P 128618 6.65e-08 -0.362668 8e-10 schizophrenia 4_102859339 rs223346 ENSG00000164039.14 BDH2 -240544 2.43e-06 0.218649 8e-10 schizophrenia 4_102859339 rs223346 ENSG00000145354.9 CISD2 -9639 2.14e-07 -0.193704 8e-10 schizophrenia 4_102859339 rs223346 ENSG00000248971.2 KRT8P46 129168 2e-06 -0.341433 8e-10 schizophrenia 4_102869029 rs223332 ENSG00000164039.14 BDH2 -230854 2.83e-07 0.244639 3e-08 schizophrenia 4_102869029 rs223332 ENSG00000145354.9 CISD2 51 3.02e-08 -0.212681 3e-08 schizophrenia 4_102869029 rs223332 ENSG00000248971.2 KRT8P46 138858 3.67e-06 -0.344856 3e-08 schizophrenia 4_102869029 rs223332 ENSG00000230069.3 LRRC37A15P 138308 3.11e-08 -0.383696 3e-08 schizophrenia 4_102906331 rs11722779 ENSG00000230069.3 LRRC37A15P 175610 1.79e-07 -0.360444 3e-08 schizophrenia 4_102906331 rs11722779 ENSG00000248971.2 KRT8P46 176160 2.38e-06 -0.347461 3e-08 schizophrenia 4_102906331 rs11722779 ENSG00000145354.9 CISD2 37353 5.19e-07 -0.192659 3e-08 schizophrenia 4_102906331 rs11722779 ENSG00000164039.14 BDH2 -193552 2.4e-07 0.243503 3e-08 schizophrenia 4_102906331 rs11722779 ENSG00000230069.3 LRRC37A15P 175610 1.79e-07 -0.360444 4e-08 schizophrenia 4_102906331 rs11722779 ENSG00000248971.2 KRT8P46 176160 2.38e-06 -0.347461 4e-08 schizophrenia 4_102906331 rs11722779 ENSG00000145354.9 CISD2 37353 5.19e-07 -0.192659 4e-08 schizophrenia 4_102906331 rs11722779 ENSG00000164039.14 BDH2 -193552 2.4e-07 0.243503 4e-08 schizophrenia 4_103016776 rs7676765 ENSG00000145354.9 CISD2 147798 9.49e-07 -0.189716 3e-10 schizophrenia 4_103016776 rs7676765 ENSG00000248971.2 KRT8P46 286605 2.07e-06 -0.35152 3e-10 schizophrenia 4_103016776 rs7676765 ENSG00000230069.3 LRRC37A15P 286055 3.18e-07 -0.355897 3e-10 schizophrenia 4_103016776 rs7676765 ENSG00000164039.14 BDH2 -83107 9.6e-08 0.252219 3e-10 schizophrenia 4_103053903 rs7688014 ENSG00000145354.9 CISD2 184925 2.1e-06 -0.183478 3e-06 schizophrenia 4_103053903 rs7688014 ENSG00000164039.14 BDH2 -45980 3.56e-11 0.303578 3e-06 schizophrenia 4_103053903 rs7688014 ENSG00000230069.3 LRRC37A15P 323182 1.99e-05 -0.300313 3e-06 schizophrenia 4_103053903 rs7688014 ENSG00000248971.2 KRT8P46 323732 1.11e-06 -0.35875 3e-06 schizophrenia 4_169705401 rs10520163 ENSG00000109572.13 CLCN3 92768 2.95e-05 -0.139043 9e-09 schizophrenia 4_169705401 rs10520163 ENSG00000137601.16 NEK1 92772 2.82e-05 -0.178454 9e-09 schizophrenia 4_169705401 rs10520163 ENSG00000109572.13 CLCN3 92768 2.95e-05 -0.139043 1e-08 schizophrenia 4_169705401 rs10520163 ENSG00000137601.16 NEK1 92772 2.82e-05 -0.178454 1e-08 schizophrenia 4_169705401 rs10520163 ENSG00000109572.13 CLCN3 92768 2.95e-05 -0.139043 3e-08 schizophrenia 4_169705401 rs10520163 ENSG00000137601.16 NEK1 92772 2.82e-05 -0.178454 3e-08 schizophrenia 4_169705401 rs10520163 ENSG00000109572.13 CLCN3 92768 2.95e-05 -0.139043 1e-09 schizophrenia 4_169705401 rs10520163 ENSG00000137601.16 NEK1 92772 2.82e-05 -0.178454 1e-09 schizophrenia 5_102434022 rs6878284 ENSG00000173930.8 SLCO4C1 137473 1.29e-10 -0.601769 9e-09 schizophrenia 5_102434022 rs6878284 ENSG00000173930.8 SLCO4C1 137473 1.29e-10 -0.601769 2e-07 schizophrenia 5_102523613 rs1502844 ENSG00000173930.8 SLCO4C1 227064 5.2e-10 -0.593963 1e-06 schizophrenia 5_138505171 rs13164092 ENSG00000044115.20 CTNNA1 -105796 3.5e-05 -0.145759 1e-09 schizophrenia 5_138505171 rs13164092 ENSG00000044115.20 CTNNA1 -105796 3.5e-05 -0.145759 2e-10 schizophrenia 5_138505171 rs13164092 ENSG00000044115.20 CTNNA1 -105796 3.5e-05 -0.145759 1e-09 schizophrenia 5_138515503 rs3849046 ENSG00000044115.20 CTNNA1 -95464 6.12e-05 -0.13731 6e-09 schizophrenia 5_138515503 rs3849046 ENSG00000044115.20 CTNNA1 -95464 6.12e-05 -0.13731 2e-09 schizophrenia 5_138515503 rs3849046 ENSG00000044115.20 CTNNA1 -95464 6.12e-05 -0.13731 2e-09 schizophrenia 5_138515503 rs3849046 ENSG00000044115.20 CTNNA1 -95464 6.12e-05 -0.13731 3e-08 schizophrenia 5_138515503 rs3849046 ENSG00000044115.20 CTNNA1 -95464 6.12e-05 -0.13731 2e-08 schizophrenia 5_138515503 rs3849046 ENSG00000044115.20 CTNNA1 -95464 6.12e-05 -0.13731 5e-09 schizophrenia 5_138515503 rs3849046 ENSG00000044115.20 CTNNA1 -95464 6.12e-05 -0.13731 1e-08 schizophrenia 5_179099690 rs4701043 ENSG00000234284.6 ZNF879 75938 2.31e-07 0.304712 5e-07 schizophrenia 5_179099690 rs4701043 ENSG00000234284.6 ZNF879 75938 2.31e-07 0.304712 2e-06 schizophrenia 6_25874195 rs13198474 ENSG00000186470.13 BTN3A2 -490964 9.76e-07 -0.626722 3e-20 schizophrenia 6_26332377 rs9467711 ENSG00000186470.13 BTN3A2 -32782 4.54e-06 -0.41931 3e-19 schizophrenia 6_26332377 rs9467711 ENSG00000186470.13 BTN3A2 -32782 4.54e-06 -0.41931 2e-22 schizophrenia 6_26391166 rs2237234 ENSG00000186470.13 BTN3A2 26007 2.56e-05 -0.283239 4e-10 schizophrenia 6_26408323 rs75782365 ENSG00000186470.13 BTN3A2 43164 1.25e-10 -0.799538 2e-27 schizophrenia 6_26408323 rs75782365 ENSG00000186470.13 BTN3A2 43164 1.25e-10 -0.799538 3e-25 schizophrenia 6_26408323 rs75782365 ENSG00000186470.13 BTN3A2 43164 1.25e-10 -0.799538 8e-24 schizophrenia 6_26409662 rs41266839 ENSG00000186470.13 BTN3A2 44503 8.12e-09 -0.747539 7e-27 schizophrenia 6_26466161 rs1977199 ENSG00000186470.13 BTN3A2 101002 5.68e-05 0.25134 1e-08 schizophrenia 6_26478024 rs34104395 ENSG00000186470.13 BTN3A2 112865 3.94e-11 -0.705623 9e-20 schizophrenia 6_26955320 rs9348739 ENSG00000186470.13 BTN3A2 590161 1.44e-06 -0.435322 5e-17 schizophrenia 6_27039908 rs35741362 ENSG00000186470.13 BTN3A2 674749 4.54e-05 -0.383435 2e-18 schizophrenia 6_27310241 rs16897515 ENSG00000124613.8 ZNF391 -64374 0.000103706 0.365864 4e-07 schizophrenia 6_27332531 rs13212562 ENSG00000186470.13 BTN3A2 967372 5.76e-06 -0.455904 3e-16 schizophrenia 6_27344299 rs764284 ENSG00000124613.8 ZNF391 -30316 1.29e-11 -0.434008 6e-11 schizophrenia 6_27740953 rs6940116 ENSG00000204789.4 ZNF204P 380732 3.32e-05 0.248593 2e-15 schizophrenia 6_27742386 rs17693963 ENSG00000187626.8 ZKSCAN4 -509838 9.03e-05 0.570529 3e-09 schizophrenia 6_27742386 rs17693963 ENSG00000187626.8 ZKSCAN4 -509838 9.03e-05 0.570529 2e-09 schizophrenia 6_27742386 rs17693963 ENSG00000187626.8 ZKSCAN4 -509838 9.03e-05 0.570529 3e-11 schizophrenia 6_27742386 rs17693963 ENSG00000187626.8 ZKSCAN4 -509838 9.03e-05 0.570529 3e-11 schizophrenia 6_27837477 rs34706883 ENSG00000187626.8 ZKSCAN4 -414747 4.25e-05 0.603842 5e-27 schizophrenia 6_27837477 rs34706883 ENSG00000187626.8 ZKSCAN4 -414747 4.25e-05 0.603842 2e-26 schizophrenia 6_27856988 rs200986 ENSG00000216901.1 ZNF603P -319200 6.57e-07 0.499878 2e-11 schizophrenia 6_27856988 rs200986 ENSG00000197062.11 ZSCAN26 -410022 5.11e-07 -0.20635 2e-11 schizophrenia 6_27856988 rs200986 ENSG00000187987.9 ZSCAN23 -586514 8.33e-06 0.32529 2e-11 schizophrenia 6_28043874 rs202906 ENSG00000197062.11 ZSCAN26 -223136 7.8e-06 -0.291147 3e-16 schizophrenia 6_28195002 rs1150688 ENSG00000197062.11 ZSCAN26 -72008 4.91e-10 -0.226961 8e-11 schizophrenia 6_28195002 rs1150688 ENSG00000176933.5 TOB2P1 -23632 0.000101234 -0.307757 8e-11 schizophrenia 6_28195002 rs1150688 ENSG00000235109.7 ZSCAN31 -161269 3.59e-05 0.208368 8e-11 schizophrenia 6_28195002 rs1150688 ENSG00000187987.9 ZSCAN23 -248500 5.1e-06 0.302283 8e-11 schizophrenia 6_28195002 rs1150688 ENSG00000216901.1 ZNF603P 18814 1.07e-16 0.701745 8e-11 schizophrenia 6_28230108 rs34787248 ENSG00000235109.7 ZSCAN31 -126163 0.00014912 0.246068 2e-11 schizophrenia 6_28230108 rs34787248 ENSG00000197062.11 ZSCAN26 -36902 8.47e-06 -0.215198 2e-11 schizophrenia 6_28230108 rs34787248 ENSG00000187626.8 ZKSCAN4 -22116 0.000113662 0.293463 2e-11 schizophrenia 6_28246920 rs17720293 ENSG00000187626.8 ZKSCAN4 -5304 5.66e-05 0.505942 3e-23 schizophrenia 6_28259826 rs1635 ENSG00000216901.1 ZNF603P 83638 3.95e-05 0.648275 7e-12 schizophrenia 6_28357424 rs6921919 ENSG00000216901.1 ZNF603P 181236 1.18e-08 0.618142 1e-19 schizophrenia 6_28432761 rs7766356 ENSG00000216901.1 ZNF603P 256573 4.17e-08 0.678441 3e-21 schizophrenia 6_28447190 rs16894116 ENSG00000197062.11 ZSCAN26 180180 0.000153472 -0.176623 3e-21 schizophrenia 6_28447190 rs16894116 ENSG00000216901.1 ZNF603P 271002 2.11e-08 0.61938 3e-21 schizophrenia 6_28594812 rs115031589 ENSG00000216901.1 ZNF603P 418624 1.54e-08 0.645806 3e-20 schizophrenia 6_28610509 rs116663187 ENSG00000216901.1 ZNF603P 434321 4.06e-07 0.539545 2e-15 schizophrenia 6_28610509 rs116663187 ENSG00000197062.11 ZSCAN26 343499 1.53e-06 -0.210452 2e-15 schizophrenia 6_28691630 rs144911693 ENSG00000216901.1 ZNF603P 515442 0.000117284 0.34687 5e-14 schizophrenia 6_28691630 rs144911693 ENSG00000235109.7 ZSCAN31 335359 2.46e-05 0.205507 5e-14 schizophrenia 6_28699892 rs116137698 ENSG00000187626.8 ZKSCAN4 447668 0.000127641 0.567503 3e-26 schizophrenia 6_28699892 rs116137698 ENSG00000204644.9 ZFP57 -981218 1.91e-05 1.12734 3e-26 schizophrenia 6_28744470 rs115329265 ENSG00000197062.11 ZSCAN26 477460 1.31e-05 -0.239415 5e-36 schizophrenia 6_28744470 rs115329265 ENSG00000216901.1 ZNF603P 568282 0.000150855 0.513154 5e-36 schizophrenia 6_28744470 rs115329265 ENSG00000197062.11 ZSCAN26 477460 1.31e-05 -0.239415 6e-33 schizophrenia 6_28744470 rs115329265 ENSG00000216901.1 ZNF603P 568282 0.000150855 0.513154 6e-33 schizophrenia 6_28744470 rs115329265 ENSG00000197062.11 ZSCAN26 477460 1.31e-05 -0.239415 3e-31 schizophrenia 6_28744470 rs115329265 ENSG00000216901.1 ZNF603P 568282 0.000150855 0.513154 3e-31 schizophrenia 6_28744470 rs115329265 ENSG00000197062.11 ZSCAN26 477460 1.31e-05 -0.239415 2e-27 schizophrenia 6_28744470 rs115329265 ENSG00000216901.1 ZNF603P 568282 0.000150855 0.513154 2e-27 schizophrenia 6_28744470 rs115329265 ENSG00000197062.11 ZSCAN26 477460 1.31e-05 -0.239415 1e-27 schizophrenia 6_28744470 rs115329265 ENSG00000216901.1 ZNF603P 568282 0.000150855 0.513154 1e-27 schizophrenia 6_29015497 rs116757206 ENSG00000187626.8 ZKSCAN4 763273 0.000127641 0.567503 1e-25 schizophrenia 6_29015497 rs116757206 ENSG00000204644.9 ZFP57 -665613 1.91e-05 1.12734 1e-25 schizophrenia 6_29150075 rs144649399 ENSG00000187987.9 ZSCAN23 706573 2.2e-05 0.387799 1e-12 schizophrenia 6_29276442 rs144447022 ENSG00000204644.9 ZFP57 -404668 1.91e-05 1.12734 9e-28 schizophrenia 6_29276442 rs144447022 ENSG00000204644.9 ZFP57 -404668 1.91e-05 1.12734 2e-28 schizophrenia 6_29374998 rs114071887 ENSG00000204644.9 ZFP57 -306112 1.91e-05 1.12734 7e-25 schizophrenia 6_29445191 rs145501595 ENSG00000281831.1 HCP5B -428592 3.24e-07 0.612735 1e-10 schizophrenia 6_29445191 rs145501595 ENSG00000281831.1 HCP5B -428592 3.24e-07 0.612735 1e-10 schizophrenia 6_29638984 rs138488080 ENSG00000239257.1 RPL23AP1 -87898 6.4e-08 0.613123 3e-16 schizophrenia 6_29638984 rs138488080 ENSG00000281831.1 HCP5B -234799 8.37e-11 0.917072 3e-16 schizophrenia 6_29638984 rs138488080 ENSG00000204644.9 ZFP57 -42126 4.12e-16 1.13955 3e-16 schizophrenia 6_29638984 rs138488080 ENSG00000230795.3 HLA-K -288194 2.87e-07 -0.641621 3e-16 schizophrenia 6_29639270 rs114041423 ENSG00000204644.9 ZFP57 -41840 6.14e-23 1.13932 1e-15 schizophrenia 6_29639270 rs114041423 ENSG00000230795.3 HLA-K -287908 8.19e-09 -0.618609 1e-15 schizophrenia 6_29639270 rs114041423 ENSG00000281831.1 HCP5B -234513 7.69e-10 0.760798 1e-15 schizophrenia 6_29639270 rs114041423 ENSG00000239257.1 RPL23AP1 -87612 4.69e-08 0.537727 1e-15 schizophrenia 6_29642504 rs115374247 ENSG00000273340.1 MICE -102730 6.57e-06 -0.346473 2e-13 schizophrenia 6_29642504 rs115374247 ENSG00000204644.9 ZFP57 -38606 7.47e-06 0.47377 2e-13 schizophrenia 6_29642504 rs115374247 ENSG00000230795.3 HLA-K -284674 1.72e-06 -0.418723 2e-13 schizophrenia 6_29642504 rs115374247 ENSG00000239257.1 RPL23AP1 -84378 2.69e-10 0.488786 2e-13 schizophrenia 6_29642504 rs115374247 ENSG00000273340.1 MICE -102730 6.57e-06 -0.346473 2e-13 schizophrenia 6_29642504 rs115374247 ENSG00000204644.9 ZFP57 -38606 7.47e-06 0.47377 2e-13 schizophrenia 6_29642504 rs115374247 ENSG00000230795.3 HLA-K -284674 1.72e-06 -0.418723 2e-13 schizophrenia 6_29642504 rs115374247 ENSG00000239257.1 RPL23AP1 -84378 2.69e-10 0.488786 2e-13 schizophrenia 6_29660317 rs143363269 ENSG00000239257.1 RPL23AP1 -66565 4.69e-08 0.537727 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000281831.1 HCP5B -213466 7.69e-10 0.760798 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000230795.3 HLA-K -266861 8.19e-09 -0.618609 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000204644.9 ZFP57 -20793 6.14e-23 1.13932 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000239257.1 RPL23AP1 -66565 4.69e-08 0.537727 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000281831.1 HCP5B -213466 7.69e-10 0.760798 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000230795.3 HLA-K -266861 8.19e-09 -0.618609 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000204644.9 ZFP57 -20793 6.14e-23 1.13932 1e-10 schizophrenia 6_29681770 rs385492 ENSG00000230795.3 HLA-K -245408 4.1e-05 -0.366691 4e-09 schizophrenia 6_29681770 rs385492 ENSG00000239257.1 RPL23AP1 -45112 1.01e-11 0.52593 4e-09 schizophrenia 6_29681770 rs385492 ENSG00000206341.7 HLA-H -206697 6.91e-06 0.376553 4e-09 schizophrenia 6_29681770 rs385492 ENSG00000204644.9 ZFP57 660 3.42e-08 0.578489 4e-09 schizophrenia 6_29681770 rs385492 ENSG00000235821.1 IFITM4P -69378 5.23e-05 -0.344554 4e-09 schizophrenia 6_29681770 rs385492 ENSG00000230795.3 HLA-K -245408 4.1e-05 -0.366691 1e-08 schizophrenia 6_29681770 rs385492 ENSG00000239257.1 RPL23AP1 -45112 1.01e-11 0.52593 1e-08 schizophrenia 6_29681770 rs385492 ENSG00000206341.7 HLA-H -206697 6.91e-06 0.376553 1e-08 schizophrenia 6_29681770 rs385492 ENSG00000204644.9 ZFP57 660 3.42e-08 0.578489 1e-08 schizophrenia 6_29681770 rs385492 ENSG00000235821.1 IFITM4P -69378 5.23e-05 -0.344554 1e-08 schizophrenia 6_29696112 rs3131888 ENSG00000230795.3 HLA-K -231066 3.23e-07 -0.413136 7e-06 schizophrenia 6_29696112 rs3131888 ENSG00000273340.1 MICE -49122 4.38e-08 -0.384246 7e-06 schizophrenia 6_29696112 rs3131888 ENSG00000239257.1 RPL23AP1 -30770 1.45e-08 0.413234 7e-06 schizophrenia 6_29696112 rs3131888 ENSG00000204644.9 ZFP57 15002 1.27e-07 0.51183 7e-06 schizophrenia 6_29783215 rs144018888 ENSG00000204644.9 ZFP57 102105 5.43e-05 0.477793 3e-12 schizophrenia 6_29783215 rs144018888 ENSG00000176998.4 HCG4 -9221 3.09e-05 -0.471268 3e-12 schizophrenia 6_29783215 rs144018888 ENSG00000239257.1 RPL23AP1 56333 3.71e-05 0.369844 3e-12 schizophrenia 6_29783228 rs144373461 ENSG00000137312.14 FLOT1 -959505 1.46e-06 0.24097 6e-16 schizophrenia 6_29783228 rs144373461 ENSG00000239257.1 RPL23AP1 56346 1.24e-07 0.492175 6e-16 schizophrenia 6_29783228 rs144373461 ENSG00000176998.4 HCG4 -9208 8.29e-06 -0.531481 6e-16 schizophrenia 6_29783228 rs144373461 ENSG00000137312.14 FLOT1 -959505 1.46e-06 0.24097 2e-17 schizophrenia 6_29783228 rs144373461 ENSG00000239257.1 RPL23AP1 56346 1.24e-07 0.492175 2e-17 schizophrenia 6_29783228 rs144373461 ENSG00000176998.4 HCG4 -9208 8.29e-06 -0.531481 2e-17 schizophrenia 6_29783228 rs144373461 ENSG00000137312.14 FLOT1 -959505 1.46e-06 0.24097 1e-17 schizophrenia 6_29783228 rs144373461 ENSG00000239257.1 RPL23AP1 56346 1.24e-07 0.492175 1e-17 schizophrenia 6_29783228 rs144373461 ENSG00000176998.4 HCG4 -9208 8.29e-06 -0.531481 1e-17 schizophrenia 6_29783976 rs142425863 ENSG00000239257.1 RPL23AP1 57094 5.33e-05 0.342263 5e-11 schizophrenia 6_29783976 rs142425863 ENSG00000176998.4 HCG4 -8460 3.27e-06 -0.492722 5e-11 schizophrenia 6_29842049 rs116326873 ENSG00000204644.9 ZFP57 160939 6.59e-05 0.542789 2e-17 schizophrenia 6_29842049 rs116326873 ENSG00000239257.1 RPL23AP1 115167 2.37e-06 0.481159 2e-17 schizophrenia 6_29842049 rs116326873 ENSG00000281831.1 HCP5B -31734 6.47e-05 0.525256 2e-17 schizophrenia 6_29842049 rs116326873 ENSG00000137312.14 FLOT1 -900684 6.42e-06 0.246011 2e-17 schizophrenia 6_29882943 rs151267808 ENSG00000281831.1 HCP5B 9160 9.34e-06 0.963536 1e-22 schizophrenia 6_29882943 rs151267808 ENSG00000137312.14 FLOT1 -859790 3.01e-07 0.46 1e-22 schizophrenia 6_29882943 rs151267808 ENSG00000239257.1 RPL23AP1 156061 3.84e-06 0.785564 1e-22 schizophrenia 6_29882943 rs151267808 ENSG00000066379.14 POLR1H -178698 9.9e-05 -0.447054 1e-22 schizophrenia 6_29882943 rs151267808 ENSG00000231226.1 TRIM31-AS1 -222300 6.2e-05 -0.424993 1e-22 schizophrenia 6_29882943 rs151267808 ENSG00000204644.9 ZFP57 201833 7.56e-07 1.10266 1e-22 schizophrenia 6_29931900 rs2524005 ENSG00000176998.4 HCG4 139464 4.08e-05 -0.471805 5e-07 schizophrenia 6_29931900 rs2524005 ENSG00000281831.1 HCP5B 58117 5.61e-05 0.468301 5e-07 schizophrenia 6_29931900 rs2524005 ENSG00000239257.1 RPL23AP1 205018 7.62e-05 0.36119 5e-07 schizophrenia 6_29931900 rs2524005 ENSG00000204644.9 ZFP57 250790 1.62e-08 0.660154 5e-07 schizophrenia 6_29931900 rs2524005 ENSG00000137312.14 FLOT1 -810833 8.02e-06 0.215495 5e-07 schizophrenia 6_29931900 rs2524005 ENSG00000230795.3 HLA-K 4722 7.64e-09 -0.560137 5e-07 schizophrenia 6_29955302 rs111312615 ENSG00000230795.3 HLA-K 28124 2.56e-06 -0.49468 4e-12 schizophrenia 6_29955302 rs111312615 ENSG00000239257.1 RPL23AP1 228420 2.34e-06 0.452608 4e-12 schizophrenia 6_29955302 rs111312615 ENSG00000137312.14 FLOT1 -787431 6.96e-05 0.205592 4e-12 schizophrenia 6_29955302 rs111312615 ENSG00000176998.4 HCG4 162866 1.11e-05 -0.534762 4e-12 schizophrenia 6_29955302 rs111312615 ENSG00000204644.9 ZFP57 274192 2.89e-12 0.841704 4e-12 schizophrenia 6_29955302 rs111312615 ENSG00000230795.3 HLA-K 28124 2.56e-06 -0.49468 1e-11 schizophrenia 6_29955302 rs111312615 ENSG00000239257.1 RPL23AP1 228420 2.34e-06 0.452608 1e-11 schizophrenia 6_29955302 rs111312615 ENSG00000137312.14 FLOT1 -787431 6.96e-05 0.205592 1e-11 schizophrenia 6_29955302 rs111312615 ENSG00000176998.4 HCG4 162866 1.11e-05 -0.534762 1e-11 schizophrenia 6_29955302 rs111312615 ENSG00000204644.9 ZFP57 274192 2.89e-12 0.841704 1e-11 schizophrenia 6_29972902 rs114204022 ENSG00000230795.3 HLA-K 45724 6.49e-19 -0.770362 5e-11 schizophrenia 6_29972902 rs114204022 ENSG00000239257.1 RPL23AP1 246020 9e-05 0.346357 5e-11 schizophrenia 6_29972902 rs114204022 ENSG00000273340.1 MICE 227668 5.37e-05 -0.34189 5e-11 schizophrenia 6_29972902 rs114204022 ENSG00000228078.1 HLA-U 38801 1.39e-05 0.525558 5e-11 schizophrenia 6_29972902 rs114204022 ENSG00000227262.3 HCG4B 45929 7.63e-05 -0.34455 5e-11 schizophrenia 6_29972902 rs114204022 ENSG00000204644.9 ZFP57 291792 4.58e-14 0.816588 5e-11 schizophrenia 6_29983056 rs114950038 ENSG00000239257.1 RPL23AP1 256174 1.27e-05 0.36017 2e-12 schizophrenia 6_29983056 rs114950038 ENSG00000230795.3 HLA-K 55878 1.22e-07 -0.471078 2e-12 schizophrenia 6_30064745 rs8321 ENSG00000281831.1 HCP5B 190962 8.14e-06 0.996121 8e-09 schizophrenia 6_30064745 rs8321 ENSG00000137312.14 FLOT1 -677988 2.74e-08 0.508456 8e-09 schizophrenia 6_30064745 rs8321 ENSG00000239257.1 RPL23AP1 337863 8.93e-06 0.778305 8e-09 schizophrenia 6_30064745 rs8321 ENSG00000204644.9 ZFP57 383635 2.5e-06 1.08283 8e-09 schizophrenia 6_30112719 rs116676919 ENSG00000204616.10 TRIM31 -387 9.46e-06 -0.279522 4e-14 schizophrenia 6_30112719 rs116676919 ENSG00000204644.9 ZFP57 431609 0.000108514 0.703923 4e-14 schizophrenia 6_30112719 rs116676919 ENSG00000137312.14 FLOT1 -630014 4.71e-08 0.390722 4e-14 schizophrenia 6_30154846 rs115242751 ENSG00000281831.1 HCP5B 281063 2.96e-05 0.630598 1e-16 schizophrenia 6_30197496 rs2523722 ENSG00000270604.5 HCG17 -56968 8.37e-06 -0.58383 1e-16 schizophrenia 6_30197496 rs2523722 ENSG00000281831.1 HCP5B 323713 3.97e-05 0.566131 1e-16 schizophrenia 6_30202733 rs116408368 ENSG00000281831.1 HCP5B 328950 4.21e-05 0.55415 7e-17 schizophrenia 6_30202733 rs116408368 ENSG00000270604.5 HCG17 -51731 2.11e-05 -0.548905 7e-17 schizophrenia 6_30202733 rs116408368 ENSG00000281831.1 HCP5B 328950 4.21e-05 0.55415 1e-21 schizophrenia 6_30202733 rs116408368 ENSG00000270604.5 HCG17 -51731 2.11e-05 -0.548905 1e-21 schizophrenia 6_30206354 rs2021722 ENSG00000270604.5 HCG17 -48110 2.11e-05 -0.548905 2e-12 schizophrenia 6_30206354 rs2021722 ENSG00000281831.1 HCP5B 332571 4.21e-05 0.55415 2e-12 schizophrenia 6_30206354 rs2021722 ENSG00000270604.5 HCG17 -48110 2.11e-05 -0.548905 2e-12 schizophrenia 6_30206354 rs2021722 ENSG00000281831.1 HCP5B 332571 4.21e-05 0.55415 2e-12 schizophrenia 6_30368886 rs114200269 ENSG00000281831.1 HCP5B 495103 2.78e-05 1.08301 2e-19 schizophrenia 6_30368886 rs114200269 ENSG00000204644.9 ZFP57 687776 5.34e-06 1.20948 2e-19 schizophrenia 6_30368886 rs114200269 ENSG00000137312.14 FLOT1 -373847 3.23e-09 0.619516 2e-19 schizophrenia 6_30374976 rs115707823 ENSG00000281831.1 HCP5B 501193 8.17e-05 0.816015 6e-18 schizophrenia 6_30397852 rs115687605 ENSG00000137312.14 FLOT1 -344881 5.31e-07 0.417544 3e-13 schizophrenia 6_30397852 rs115687605 ENSG00000137312.14 FLOT1 -344881 5.31e-07 0.417544 2e-15 schizophrenia 6_30598076 rs144959664 ENSG00000137312.14 FLOT1 -144657 1.84e-07 0.398637 1e-14 schizophrenia 6_30598076 rs144959664 ENSG00000204644.9 ZFP57 916966 0.000143041 0.736188 1e-14 schizophrenia 6_30639723 rs149915948 ENSG00000204644.9 ZFP57 958613 2.85e-06 0.536997 7e-11 schizophrenia 6_30639723 rs149915948 ENSG00000239257.1 RPL23AP1 912841 6.19e-05 0.352218 7e-11 schizophrenia 6_30814225 rs886424 ENSG00000204536.13 CCHCR1 -344013 3.64e-06 0.565971 9e-07 schizophrenia 6_30814225 rs886424 ENSG00000214894.6 LINC00243 -16434 0.000103049 0.349987 9e-07 schizophrenia 6_30814428 rs114964506 ENSG00000204536.13 CCHCR1 -343810 5.62e-05 0.406654 2e-15 schizophrenia 6_30830920 rs116396069 ENSG00000137312.14 FLOT1 88187 8.1e-07 0.412814 3e-19 schizophrenia 6_30830920 rs116396069 ENSG00000204536.13 CCHCR1 -327318 1.17e-06 0.653609 3e-19 schizophrenia 6_30931418 rs114115252 ENSG00000204525.16 HLA-C -340687 4.35e-05 0.470953 8e-20 schizophrenia 6_30931418 rs114115252 ENSG00000137312.14 FLOT1 188685 7.51e-05 0.321022 8e-20 schizophrenia 6_30931418 rs114115252 ENSG00000204536.13 CCHCR1 -226820 9.06e-06 0.573303 8e-20 schizophrenia 6_30937536 rs114838832 ENSG00000137411.16 VARS2 23331 1.95e-15 -0.640736 2e-10 schizophrenia 6_30939558 rs115123027 ENSG00000204525.16 HLA-C -332547 1.01e-06 0.533219 4e-20 schizophrenia 6_30939558 rs115123027 ENSG00000204536.13 CCHCR1 -218680 2.24e-06 0.583046 4e-20 schizophrenia 6_30945681 rs3132581 ENSG00000204525.16 HLA-C -326424 4.35e-05 0.470953 2e-07 schizophrenia 6_30945681 rs3132581 ENSG00000204536.13 CCHCR1 -212557 9.06e-06 0.573303 2e-07 schizophrenia 6_30945681 rs3132581 ENSG00000137312.14 FLOT1 202948 7.51e-05 0.321022 2e-07 schizophrenia 6_31025536 rs115487448 ENSG00000204540.10 PSORS1C1 -89214 6.47e-05 -0.431206 1e-09 schizophrenia 6_31025536 rs115487448 ENSG00000204536.13 CCHCR1 -132702 0.000110519 0.385411 1e-09 schizophrenia 6_31111032 rs3132556 ENSG00000214894.6 LINC00243 280373 1.16e-05 0.291609 1e-09 schizophrenia 6_31135187 rs3132565 ENSG00000206344.7 HCG27 -62951 5.14e-05 0.243593 1e-09 schizophrenia 6_31137370 rs149979052 ENSG00000204536.13 CCHCR1 -20868 1.75e-06 0.516288 7e-19 schizophrenia 6_31137370 rs149979052 ENSG00000204540.10 PSORS1C1 22620 9.65e-06 -0.521502 7e-19 schizophrenia 6_31137370 rs149979052 ENSG00000214894.6 LINC00243 306711 1.84e-05 0.33997 7e-19 schizophrenia 6_31137370 rs149979052 ENSG00000204338.8 CYP21A1P -868319 4.27e-06 -0.593904 7e-19 schizophrenia 6_31137370 rs149979052 ENSG00000204536.13 CCHCR1 -20868 1.75e-06 0.516288 7e-14 schizophrenia 6_31137370 rs149979052 ENSG00000204540.10 PSORS1C1 22620 9.65e-06 -0.521502 7e-14 schizophrenia 6_31137370 rs149979052 ENSG00000214894.6 LINC00243 306711 1.84e-05 0.33997 7e-14 schizophrenia 6_31137370 rs149979052 ENSG00000204338.8 CYP21A1P -868319 4.27e-06 -0.593904 7e-14 schizophrenia 6_31137636 rs1265099 ENSG00000214894.6 LINC00243 306977 1.68e-05 0.214677 2e-10 schizophrenia 6_31137636 rs1265099 ENSG00000206344.7 HCG27 -60502 5.26e-07 0.30049 2e-10 schizophrenia 6_31219298 rs114276265 ENSG00000204536.13 CCHCR1 61060 3.16e-11 0.446255 4e-16 schizophrenia 6_31229085 rs144762289 ENSG00000204338.8 CYP21A1P -776604 3.79e-05 -0.558428 3e-17 schizophrenia 6_31229085 rs144762289 ENSG00000204536.13 CCHCR1 70847 2.03e-08 0.621125 3e-17 schizophrenia 6_31245806 rs114142645 ENSG00000204531.17 POU5F1 65075 5.65e-05 0.210218 2e-08 schizophrenia 6_31245806 rs114142645 ENSG00000206344.7 HCG27 47668 6.31e-05 0.291014 2e-08 schizophrenia 6_31245806 rs114142645 ENSG00000204528.3 PSORS1C3 67907 8.58e-06 0.420975 2e-08 schizophrenia 6_31268274 rs111977918 ENSG00000204536.13 CCHCR1 110036 4.29e-05 -0.283769 2e-08 schizophrenia 6_31268274 rs111977918 ENSG00000204525.16 HLA-C -3831 4.3e-06 -0.280529 2e-08 schizophrenia 6_31300843 rs114274203 ENSG00000277402.1 MIR6891 -54473 5.83e-05 0.336353 3e-12 schizophrenia 6_31345252 rs116509918 ENSG00000204536.13 CCHCR1 187014 4.86e-05 0.496293 6e-20 schizophrenia 6_31345252 rs116509918 ENSG00000244731.7 C4A -636772 3.94e-07 -0.643256 6e-20 schizophrenia 6_31345252 rs116509918 ENSG00000137312.14 FLOT1 602519 2.21e-05 0.322084 6e-20 schizophrenia 6_31345252 rs116509918 ENSG00000204338.8 CYP21A1P -660437 4.6e-06 -0.662021 6e-20 schizophrenia 6_31353490 rs2596500 ENSG00000214894.6 LINC00243 522831 0.000106409 0.362109 8e-20 schizophrenia 6_31353490 rs2596500 ENSG00000204338.8 CYP21A1P -652199 4.57e-06 -0.692946 8e-20 schizophrenia 6_31353490 rs2596500 ENSG00000244731.7 C4A -628534 7.99e-07 -0.656626 8e-20 schizophrenia 6_31353490 rs2596500 ENSG00000204536.13 CCHCR1 195252 6.51e-06 0.572409 8e-20 schizophrenia 6_31353490 rs2596500 ENSG00000137312.14 FLOT1 610757 2.08e-05 0.338011 8e-20 schizophrenia 6_31361514 rs139099016 ENSG00000244731.7 C4A -620510 5.59e-05 -0.425416 4e-09 schizophrenia 6_31361514 rs139099016 ENSG00000204520.12 MICA -38270 3.12e-05 0.448044 4e-09 schizophrenia 6_31380300 rs114904464 ENSG00000244731.7 C4A -601724 1.01e-05 -0.536932 3e-15 schizophrenia 6_31380300 rs114904464 ENSG00000204338.8 CYP21A1P -625389 3.65e-06 -0.633684 3e-15 schizophrenia 6_31380300 rs114904464 ENSG00000204536.13 CCHCR1 222062 1.84e-05 0.494407 3e-15 schizophrenia 6_31383745 rs114291394 ENSG00000277402.1 MIR6891 28429 3.24e-05 0.388689 2e-10 schizophrenia 6_31383745 rs114291394 ENSG00000204528.3 PSORS1C3 205846 4.21e-05 0.377798 2e-10 schizophrenia 6_31446032 rs114618162 ENSG00000204536.13 CCHCR1 287794 4.79e-07 0.440091 6e-16 schizophrenia 6_31481775 rs140502984 ENSG00000244731.7 C4A -500249 1.88e-06 -0.612827 5e-15 schizophrenia 6_31481775 rs140502984 ENSG00000204338.8 CYP21A1P -523914 9.17e-06 -0.647771 5e-15 schizophrenia 6_31635190 rs1046089 ENSG00000204428.12 LY6G5C -48850 1.03e-09 -0.4912 4e-06 schizophrenia 6_31758911 rs707939 ENSG00000213676.10 ATF6B -369342 7.14e-06 0.234656 4e-12 schizophrenia 6_31758911 rs707939 ENSG00000204338.8 CYP21A1P -246778 3.14e-05 0.359833 4e-12 schizophrenia 6_31819390 rs142536810 ENSG00000179344.16 HLA-DQB1 -848993 5.31e-06 -0.593376 5e-20 schizophrenia 6_31819390 rs142536810 ENSG00000204338.8 CYP21A1P -186299 3.69e-07 -0.760433 5e-20 schizophrenia 6_31819390 rs142536810 ENSG00000244731.7 C4A -162634 6.97e-09 -0.756444 5e-20 schizophrenia 6_31819390 rs142536810 ENSG00000204536.13 CCHCR1 661152 7.31e-05 0.506761 5e-20 schizophrenia 6_31858928 rs67682613 ENSG00000179344.16 HLA-DQB1 -809455 5.04e-05 -0.444781 7e-19 schizophrenia 6_31858928 rs67682613 ENSG00000244731.7 C4A -123096 2.6e-08 -0.609932 7e-19 schizophrenia 6_31858928 rs67682613 ENSG00000204525.16 HLA-C 586823 5.63e-05 0.380916 7e-19 schizophrenia 6_31858928 rs67682613 ENSG00000204338.8 CYP21A1P -146761 2.23e-05 -0.5373 7e-19 schizophrenia 6_31894038 rs142520578 ENSG00000229391.7 HLA-DRB6 -665984 1.04e-05 0.46302 5e-10 schizophrenia 6_31894038 rs142520578 ENSG00000204351.11 SKIV2L -65073 6.13e-05 0.283414 5e-10 schizophrenia 6_31894038 rs142520578 ENSG00000240053.8 LY6G5B 223871 2.77e-06 -0.250926 5e-10 schizophrenia 6_31913532 rs116385615 ENSG00000204338.8 CYP21A1P -92157 8.95e-06 -0.544931 2e-16 schizophrenia 6_31977869 rs2734325 ENSG00000248290.1 TNXA -34603 7.24e-06 -0.410514 3e-07 schizophrenia 6_31977869 rs2734325 ENSG00000204338.8 CYP21A1P -27820 3.17e-07 0.423521 3e-07 schizophrenia 6_31979683 rs389883 ENSG00000204351.11 SKIV2L 20572 6.28e-05 0.284604 1e-12 schizophrenia 6_31979683 rs389883 ENSG00000204338.8 CYP21A1P -26006 6.02e-06 0.432826 1e-12 schizophrenia 6_31979683 rs389883 ENSG00000240053.8 LY6G5B 309516 2.58e-05 -0.228274 1e-12 schizophrenia 6_32058086 rs369637 ENSG00000179344.16 HLA-DQB1 -610297 2.93e-05 -0.449511 2e-10 schizophrenia 6_32058086 rs369637 ENSG00000204338.8 CYP21A1P 52397 1.15e-07 -0.647831 2e-10 schizophrenia 6_32058086 rs369637 ENSG00000244731.7 C4A 76062 3.73e-06 -0.506675 2e-10 schizophrenia 6_32082981 rs1150754 ENSG00000204338.8 CYP21A1P 77292 1.15e-07 -0.647831 3e-12 schizophrenia 6_32082981 rs1150754 ENSG00000244731.7 C4A 100957 3.73e-06 -0.506675 3e-12 schizophrenia 6_32082981 rs1150754 ENSG00000179344.16 HLA-DQB1 -585402 2.93e-05 -0.449511 3e-12 schizophrenia 6_32103231 rs41268902 ENSG00000204338.8 CYP21A1P 97542 2.7e-05 0.545915 5e-06 schizophrenia 6_32147408 rs145076523 ENSG00000179344.16 HLA-DQB1 -520975 1.19e-06 -0.485592 5e-13 schizophrenia 6_32186508 rs114810457 ENSG00000204305.13 AGER 2184 2.48e-05 0.257965 5e-10 schizophrenia 6_32197667 rs115344853 ENSG00000204338.8 CYP21A1P 191978 3.01e-05 -0.534411 4e-14 schizophrenia 6_32197667 rs115344853 ENSG00000244731.7 C4A 215643 1.82e-07 -0.581071 4e-14 schizophrenia 6_32197667 rs115344853 ENSG00000204525.16 HLA-C 925562 2.96e-05 0.397872 4e-14 schizophrenia 6_32197667 rs115344853 ENSG00000204338.8 CYP21A1P 191978 3.01e-05 -0.534411 2e-17 schizophrenia 6_32197667 rs115344853 ENSG00000244731.7 C4A 215643 1.82e-07 -0.581071 2e-17 schizophrenia 6_32197667 rs115344853 ENSG00000204525.16 HLA-C 925562 2.96e-05 0.397872 2e-17 schizophrenia 6_32203298 rs3132935 ENSG00000244731.7 C4A 221274 5.36e-06 -0.467562 3e-07 schizophrenia 6_32203298 rs3132935 ENSG00000244731.7 C4A 221274 5.36e-06 -0.467562 5e-07 schizophrenia 6_32205216 rs3131296 ENSG00000204525.16 HLA-C 933111 1.44e-05 0.423907 2e-10 schizophrenia 6_32205216 rs3131296 ENSG00000204338.8 CYP21A1P 199527 8.65e-06 -0.583337 2e-10 schizophrenia 6_32205216 rs3131296 ENSG00000244731.7 C4A 223192 3.01e-08 -0.630742 2e-10 schizophrenia 6_32223264 rs115963308 ENSG00000204301.6 NOTCH4 -803 3.77e-05 -0.25691 3e-08 schizophrenia 6_32223264 rs115963308 ENSG00000179344.16 HLA-DQB1 -445119 1.19e-05 -0.350902 3e-08 schizophrenia 6_32228798 rs142601889 ENSG00000204301.6 NOTCH4 4731 2.66e-05 -0.22398 4e-11 schizophrenia 6_32238466 rs145547914 ENSG00000204338.8 CYP21A1P 232777 9.92e-07 -0.52064 3e-15 schizophrenia 6_32238466 rs145547914 ENSG00000244731.7 C4A 256442 3.3e-07 -0.479131 3e-15 schizophrenia 6_32238466 rs145547914 ENSG00000204525.16 HLA-C 966361 6.64e-06 0.358978 3e-15 schizophrenia 6_32239404 rs115165987 ENSG00000179344.16 HLA-DQB1 -428979 2.22e-05 -0.350595 5e-11 schizophrenia 6_32239404 rs115165987 ENSG00000244731.7 C4A 257380 1.11e-06 -0.408617 5e-11 schizophrenia 6_32317765 rs114473235 ENSG00000179344.16 HLA-DQB1 -350618 4.66e-05 -0.300516 8e-07 schizophrenia 6_32317765 rs114473235 ENSG00000198502.5 HLA-DRB5 -212522 1.82e-05 -0.401499 8e-07 schizophrenia 6_32317765 rs114473235 ENSG00000229391.7 HLA-DRB6 -242257 2.18e-06 0.441359 8e-07 schizophrenia 6_32368989 rs115558405 ENSG00000204338.8 CYP21A1P 363300 2.79e-05 -0.499413 2e-13 schizophrenia 6_32368989 rs115558405 ENSG00000244731.7 C4A 386965 8.07e-07 -0.514297 2e-13 schizophrenia 6_32371870 rs116254153 ENSG00000198502.5 HLA-DRB5 -158417 5.71e-06 -0.519425 4e-11 schizophrenia 6_32371870 rs116254153 ENSG00000179344.16 HLA-DQB1 -296513 1.54e-06 -0.430144 4e-11 schizophrenia 6_32381780 rs115035678 ENSG00000179344.16 HLA-DQB1 -286603 5.64e-06 -0.542215 1e-14 schizophrenia 6_32381780 rs115035678 ENSG00000244731.7 C4A 399756 6.01e-06 -0.554517 1e-14 schizophrenia 6_32381780 rs115035678 ENSG00000204338.8 CYP21A1P 376091 3.7e-05 -0.574509 1e-14 schizophrenia 6_32390493 rs3117099 ENSG00000240065.7 PSMB9 -463668 2.88e-05 0.295434 3e-06 schizophrenia 6_32413695 rs116047537 ENSG00000196301.3 HLA-DRB9 -59805 3.66e-05 0.43645 2e-09 schizophrenia 6_32413695 rs116047537 ENSG00000244731.7 C4A 431671 3.76e-05 -0.335036 2e-09 schizophrenia 6_32413695 rs116047537 ENSG00000198502.5 HLA-DRB5 -116592 6.39e-08 -0.533859 2e-09 schizophrenia 6_32464185 rs114002140 ENSG00000198502.5 HLA-DRB5 -66102 1.62e-08 -0.595429 9e-14 schizophrenia 6_32464869 rs115406947 ENSG00000244731.7 C4A 482845 1.01e-07 -0.564974 2e-18 schizophrenia 6_32464869 rs115406947 ENSG00000198502.5 HLA-DRB5 -65418 2.8e-05 -0.562874 2e-18 schizophrenia 6_32466042 rs138984909 ENSG00000198502.5 HLA-DRB5 -64245 4.54e-07 -0.572188 4e-13 schizophrenia 6_32469754 rs187696124 ENSG00000198502.5 HLA-DRB5 -60533 1.62e-08 -0.595429 7e-17 schizophrenia 6_32470272 rs149998036 ENSG00000198502.5 HLA-DRB5 -60015 1.62e-08 -0.595429 3e-09 schizophrenia 6_32534622 rs180778602 ENSG00000244731.7 C4A 552598 1.12e-08 -0.682916 4e-12 schizophrenia 6_32534622 rs180778602 ENSG00000179344.16 HLA-DQB1 -133761 1.14e-06 -0.57646 4e-12 schizophrenia 6_32534622 rs180778602 ENSG00000204338.8 CYP21A1P 528933 1.35e-05 -0.602462 4e-12 schizophrenia 6_32570699 rs111639056 ENSG00000198502.5 HLA-DRB5 40412 5.69e-05 -0.674416 2e-15 schizophrenia 6_32570699 rs111639056 ENSG00000179344.16 HLA-DQB1 -97684 1.35e-05 -0.569634 2e-15 schizophrenia 6_32582137 rs142790902 ENSG00000198502.5 HLA-DRB5 51850 3.38e-05 -0.649696 1e-11 schizophrenia 6_32584671 rs11753207 ENSG00000244731.7 C4A 602647 4.95e-09 -0.749975 3e-11 schizophrenia 6_32597688 rs2760981 ENSG00000179344.16 HLA-DQB1 -70695 1.03e-05 -0.313577 4e-11 schizophrenia 6_32597688 rs2760981 ENSG00000198502.5 HLA-DRB5 67401 1.09e-09 -0.534469 4e-11 schizophrenia 6_32597688 rs2760981 ENSG00000196301.3 HLA-DRB9 124188 3.84e-05 0.392213 4e-11 schizophrenia 6_32614112 rs4530903 ENSG00000232629.8 HLA-DQB2 -149422 1.98e-08 -0.587976 5e-06 schizophrenia 6_32614112 rs4530903 ENSG00000237541.3 HLA-DQA2 -127230 2.17e-06 -0.644032 5e-06 schizophrenia 6_32614112 rs4530903 ENSG00000204290.10 BTNL2 206984 2.18e-05 -0.491763 5e-06 schizophrenia 6_32634492 rs9272219 ENSG00000223534.1 HLA-DQB1-AS1 -25863 8.79e-06 -0.259856 7e-08 schizophrenia 6_32634492 rs9272219 ENSG00000232629.8 HLA-DQB2 -129042 2.45e-07 0.452052 7e-08 schizophrenia 6_32634492 rs9272219 ENSG00000179344.16 HLA-DQB1 -33891 6.06e-11 -0.512596 7e-08 schizophrenia 6_32635879 rs116139966 ENSG00000232629.8 HLA-DQB2 -127655 6.25e-07 0.436596 1e-09 schizophrenia 6_32635879 rs116139966 ENSG00000223534.1 HLA-DQB1-AS1 -24476 5.21e-05 -0.237298 1e-09 schizophrenia 6_32635879 rs116139966 ENSG00000179344.16 HLA-DQB1 -32504 2.95e-10 -0.494968 1e-09 schizophrenia 6_32668221 rs9274623 ENSG00000204338.8 CYP21A1P 662532 4.85e-06 -0.476707 6e-19 schizophrenia 6_32668221 rs9274623 ENSG00000179344.16 HLA-DQB1 -162 1.58e-05 -0.390314 6e-19 schizophrenia 6_32668836 rs147875011 ENSG00000232629.8 HLA-DQB2 -94698 1.01e-15 0.613887 3e-10 schizophrenia 6_32668836 rs147875011 ENSG00000223534.1 HLA-DQB1-AS1 8481 1.61e-07 -0.281997 3e-10 schizophrenia 6_32668836 rs147875011 ENSG00000196301.3 HLA-DRB9 195336 3.19e-06 0.472164 3e-10 schizophrenia 6_32668836 rs147875011 ENSG00000179344.16 HLA-DQB1 453 2.78e-10 -0.464074 3e-10 schizophrenia 6_32725517 rs115682897 ENSG00000240065.7 PSMB9 -128644 4.44e-05 0.292923 7e-14 schizophrenia 6_32815309 rs7383287 ENSG00000244731.7 C4A 833285 5.57e-05 -0.330323 1e-07 schizophrenia 6_32875944 rs138850297 ENSG00000240065.7 PSMB9 21783 4.5e-09 0.315246 2e-08 schizophrenia 6_32946949 rs73396800 ENSG00000204338.8 CYP21A1P 941260 3.63e-05 -0.715314 4e-16 schizophrenia 6_43370064 rs73416724 ENSG00000124574.14 ABCC10 -57302 1.7e-05 0.41357 3e-08 schizophrenia 6_43373951 rs111547017 ENSG00000124574.14 ABCC10 -53415 1.07e-06 0.489431 1e-06 schizophrenia 6_63416275 rs9341835 ENSG00000146166.16 LGSN 96298 6.51e-07 0.395562 4e-06 schizophrenia 6_63657468 rs1884117 ENSG00000146166.16 LGSN 337491 8.98e-08 -0.369062 5e-08 schizophrenia 7_100699412 rs221780 ENSG00000146830.9 GIGYF1 9964 7.94e-06 -0.244695 1e-07 schizophrenia 7_100699412 rs221780 ENSG00000146830.9 GIGYF1 9964 7.94e-06 -0.244695 3e-07 schizophrenia 7_100699412 rs221780 ENSG00000146830.9 GIGYF1 9964 7.94e-06 -0.244695 3e-06 schizophrenia 7_100715476 rs492430 ENSG00000146830.9 GIGYF1 26028 3.27e-05 -0.224296 2e-08 schizophrenia 7_100717894 rs1734907 ENSG00000146830.9 GIGYF1 28446 1.27e-05 -0.234617 4e-06 schizophrenia 7_111101521 rs17439799 ENSG00000184903.9 IMMP2L -460996 5.82e-07 -0.241249 1e-08 schizophrenia 7_111258859 rs13240464 ENSG00000184903.9 IMMP2L -303658 1.89e-06 0.240392 2e-12 schizophrenia 7_111258859 rs13240464 ENSG00000184903.9 IMMP2L -303658 1.89e-06 0.240392 3e-13 schizophrenia 7_111258859 rs13240464 ENSG00000184903.9 IMMP2L -303658 1.89e-06 0.240392 6e-11 schizophrenia 7_111258859 rs13240464 ENSG00000184903.9 IMMP2L -303658 1.89e-06 0.240392 3e-13 schizophrenia 7_111258859 rs13240464 ENSG00000184903.9 IMMP2L -303658 1.89e-06 0.240392 2e-11 schizophrenia 7_111429890 rs38751 ENSG00000184903.9 IMMP2L -132627 4.31e-08 0.25731 1e-08 schizophrenia 7_111438856 rs38752 ENSG00000184903.9 IMMP2L -123661 4.52e-06 0.236591 5e-12 schizophrenia 7_1977810 rs6461049 ENSG00000122687.17 MRM2 -264388 1.09e-06 -0.226609 6e-13 schizophrenia 7_1981360 rs12668848 ENSG00000122687.17 MRM2 -260838 1.14e-05 0.199502 1e-13 schizophrenia 7_1981360 rs12668848 ENSG00000122687.17 MRM2 -260838 1.14e-05 0.199502 1e-13 schizophrenia 7_1981360 rs12668848 ENSG00000122687.17 MRM2 -260838 1.14e-05 0.199502 4e-17 schizophrenia 7_1981360 rs12668848 ENSG00000122687.17 MRM2 -260838 1.14e-05 0.199502 1e-13 schizophrenia 7_1981360 rs12668848 ENSG00000122687.17 MRM2 -260838 1.14e-05 0.199502 2e-15 schizophrenia 7_1981360 rs12668848 ENSG00000122687.17 MRM2 -260838 1.14e-05 0.199502 8e-11 schizophrenia 7_1997034 rs4721295 ENSG00000122687.17 MRM2 -245164 1.25e-05 0.201728 6e-10 schizophrenia 7_2001797 rs1107592 ENSG00000122687.17 MRM2 -240401 2.31e-06 0.218228 5e-06 schizophrenia 7_2119802 rs3800908 ENSG00000122687.17 MRM2 -122396 6.77e-07 0.228637 7e-09 schizophrenia 7_2189213 rs1637749 ENSG00000122687.17 MRM2 -52985 1.52e-05 0.204944 3e-10 schizophrenia 7_2238591 rs7799006 ENSG00000122687.17 MRM2 -3607 1.59e-09 0.275192 5e-06 schizophrenia 7_76335026 rs2961033 ENSG00000146707.14 POMZP3 -290657 5.73e-11 -0.724483 5e-07 schizophrenia 8_143572424 rs4873803 ENSG00000204839.8 MROH6 -547 2.66e-06 -0.297856 1e-09 schizophrenia 8_143573145 rs10866912 ENSG00000204839.8 MROH6 174 4.03e-07 -0.325626 4e-08 schizophrenia 8_144461122 rs11774212 ENSG00000187954.12 CYHR1 -4555 3.35e-05 -0.178876 1e-09 schizophrenia 8_26384756 rs117325001 ENSG00000228451.3 SDAD1P1 1859 6.97e-08 -0.367413 2e-13 schizophrenia 8_26384756 rs117325001 ENSG00000228451.3 SDAD1P1 1859 6.97e-08 -0.367413 7e-06 schizophrenia 8_26411675 rs1042992 ENSG00000228451.3 SDAD1P1 28778 7.17e-08 -0.368317 2e-07 schizophrenia 8_26415252 rs73219805 ENSG00000228451.3 SDAD1P1 32355 7.17e-08 -0.368317 4e-07 schizophrenia 8_26415252 rs73219805 ENSG00000228451.3 SDAD1P1 32355 7.17e-08 -0.368317 2e-12 schizophrenia 8_26415252 rs73219805 ENSG00000228451.3 SDAD1P1 32355 7.17e-08 -0.368317 2e-11 schizophrenia 8_26421657 rs73219806 ENSG00000228451.3 SDAD1P1 38760 2.45e-08 -0.385164 7e-09 schizophrenia 8_27554275 rs188099135 ENSG00000234770.1 GULOP -5999 2.45e-06 -0.470182 3e-08 schizophrenia 8_27567832 rs11783093 ENSG00000234770.1 GULOP 7558 2.43e-05 -0.423032 8e-12 schizophrenia 8_27567832 rs11783093 ENSG00000234770.1 GULOP 7558 2.43e-05 -0.423032 9e-09 schizophrenia 8_38173827 rs16887244 ENSG00000085788.13 DDHD2 -51391 7.11e-10 0.324828 1e-10 schizophrenia 8_38277894 rs7845911 ENSG00000085788.13 DDHD2 52676 3.21e-11 0.35381 8e-09 schizophrenia 8_38351611 rs10156310 ENSG00000085788.13 DDHD2 126393 1e-10 0.344675 6e-10 schizophrenia 8_38390788 rs112537273 ENSG00000085788.13 DDHD2 165570 2.78e-09 0.330016 1e-11 schizophrenia 8_38390788 rs112537273 ENSG00000085788.13 DDHD2 165570 2.78e-09 0.330016 1e-06 schizophrenia 8_38390788 rs112537273 ENSG00000085788.13 DDHD2 165570 2.78e-09 0.330016 1e-12 schizophrenia 8_38390788 rs112537273 ENSG00000085788.13 DDHD2 165570 2.78e-09 0.330016 2e-07 schizophrenia 8_38401963 rs11986274 ENSG00000085788.13 DDHD2 176745 3.04e-09 0.30934 1e-08 schizophrenia 8_38415064 rs4647903 ENSG00000085788.13 DDHD2 189846 2.78e-09 0.330016 2e-09 schizophrenia 8_38415064 rs4647903 ENSG00000085788.13 DDHD2 189846 2.78e-09 0.330016 4e-08 schizophrenia 9_128846507 rs2977993 ENSG00000198917.12 SPOUT1 16686 1.8e-05 0.193075 2e-06 schizophrenia 9_22767165 rs505061 ENSG00000234840.1 LINC01239 120965 4.35e-13 -0.559704 2e-09 schizophrenia 9_22767165 rs505061 ENSG00000234840.1 LINC01239 120965 4.35e-13 -0.559704 5e-09 schizophrenia 9_22819577 rs7849973 ENSG00000234840.1 LINC01239 173377 9.11e-07 0.41992 8e-06 schizophrenia X_153942092 rs2269372 ENSG00000177854.7 TMEM187 -30235 1.88e-12 -0.426906 4e-08