DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE schizophrenia 1_147611315 rs583583 ENSG00000162836.11 ACP6 -59181 6.75e-12 0.575821 6e-07 schizophrenia 1_166892359 rs1040393 ENSG00000143194.12 MAEL -83223 1.44e-05 0.492151 7e-06 schizophrenia 1_31359023 rs7551345 ENSG00000084628.9 NKAIN1 119469 2.08e-05 -0.480003 4e-06 schizophrenia 10_100152437 rs1408579 ENSG00000095485.16 CWF19L1 -115243 1.15e-08 0.587281 2e-08 schizophrenia 10_102852578 rs11191419 ENSG00000214435.7 AS3MT -16938 2.36e-08 -0.543075 3e-18 schizophrenia 10_102852578 rs11191419 ENSG00000214435.7 AS3MT -16938 2.36e-08 -0.543075 6e-19 schizophrenia 10_102852578 rs11191419 ENSG00000214435.7 AS3MT -16938 2.36e-08 -0.543075 1e-16 schizophrenia 10_102866129 rs11191424 ENSG00000214435.7 AS3MT -3387 8e-08 -0.518115 3e-16 schizophrenia 10_102866129 rs11191424 ENSG00000214435.7 AS3MT -3387 8e-08 -0.518115 4e-20 schizophrenia 11_130848816 rs10791098 ENSG00000120451.10 SNX19 -67693 1.39e-09 -0.523558 2e-12 schizophrenia 11_130848918 rs10791099 ENSG00000120451.10 SNX19 -67591 1.39e-09 -0.523558 1e-08 schizophrenia 11_130849166 rs10750450 ENSG00000120451.10 SNX19 -67343 1.39e-09 -0.523558 7e-13 schizophrenia 11_130935439 rs7112616 ENSG00000120451.10 SNX19 18930 7.25e-11 -0.551161 2e-09 schizophrenia 11_130941461 rs35774874 ENSG00000120451.10 SNX19 24952 1.9e-09 -0.514615 2e-11 schizophrenia 11_130941461 rs35774874 ENSG00000120451.10 SNX19 24952 1.9e-09 -0.514615 2e-09 schizophrenia 11_130947684 rs7940866 ENSG00000120451.10 SNX19 31175 4.82e-08 -0.476331 2e-09 schizophrenia 11_130960853 rs10894294 ENSG00000120451.10 SNX19 44344 1.04e-08 -0.501195 3e-07 schizophrenia 11_130960853 rs10894294 ENSG00000120451.10 SNX19 44344 1.04e-08 -0.501195 3e-06 schizophrenia 11_130976537 rs10791106 ENSG00000120451.10 SNX19 60028 8.75e-09 -0.506916 1e-15 schizophrenia 11_130986204 rs10791111 ENSG00000120451.10 SNX19 69695 2.15e-08 -0.506293 1e-08 schizophrenia 11_131022000 rs10894308 ENSG00000120451.10 SNX19 105491 4.46e-08 -0.49654 2e-08 schizophrenia 11_131022000 rs10894308 ENSG00000120451.10 SNX19 105491 4.46e-08 -0.49654 9e-09 schizophrenia 11_131022000 rs10894308 ENSG00000120451.10 SNX19 105491 4.46e-08 -0.49654 2e-08 schizophrenia 11_49681564 rs11040472 ENSG00000255190.2 TRIM51DP -193381 4.42e-11 0.663855 3e-06 schizophrenia 11_49681564 rs11040472 ENSG00000205035.8 GRM5P1 123018 1.16e-07 0.48996 3e-06 schizophrenia 11_49681564 rs11040472 ENSG00000255190.2 TRIM51DP -193381 4.42e-11 0.663855 3e-06 schizophrenia 11_49681564 rs11040472 ENSG00000205035.8 GRM5P1 123018 1.16e-07 0.48996 3e-06 schizophrenia 11_65616284 rs58950470 ENSG00000172922.8 RNASEH2C -104663 1.02e-06 -0.350193 3e-06 schizophrenia 12_50168215 rs11169294 ENSG00000139624.12 CERS5 682 3.12e-05 0.321431 2e-08 schizophrenia 12_56055651 rs7302200 ENSG00000197728.9 RPS26 13798 4.59e-23 1.01199 1e-14 schizophrenia 13_44132132 rs9595066 ENSG00000227258.5 SMIM2-AS1 21681 6.23e-09 -1.0396 4e-06 schizophrenia 13_44132132 rs9595066 ENSG00000227258.5 SMIM2-AS1 21681 6.23e-09 -1.0396 1e-08 schizophrenia 14_103345983 rs12432904 ENSG00000259775.1 EIF5-DT 13616 2.24e-05 0.393096 4e-06 schizophrenia 14_22912771 rs9989230 ENSG00000092036.18 HAUS4 -44390 5.75e-18 -0.574542 4e-12 schizophrenia 14_22912771 rs9989230 ENSG00000257285.5 PRMT5-DT -16838 2.15e-09 0.636527 4e-12 schizophrenia 14_59498575 rs111803315 ENSG00000126790.11 L3HYPDH 14145 2.76e-06 -0.816793 3e-06 schizophrenia 15_43965756 rs2957582 ENSG00000168803.14 ADAL 635082 2.17e-05 -0.408233 2e-08 schizophrenia 15_52594765 rs4776059 ENSG00000047346.12 FAM214A -115052 1.5e-06 0.425263 4e-06 schizophrenia 15_82558175 rs17507216 ENSG00000259429.5 UBE2Q2P2 203033 3.48e-05 -0.519778 4e-10 schizophrenia 15_82558175 rs17507216 ENSG00000278662.4 GOLGA6L10 208700 1.19e-05 -0.602463 4e-10 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 1.68e-07 -0.658568 2e-11 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 1.68e-07 -0.658568 1e-10 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 1.68e-07 -0.658568 5e-12 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 1.68e-07 -0.658568 3e-11 schizophrenia 15_84037709 rs950169 ENSG00000225151.10 GOLGA2P7 -192427 1.68e-07 -0.658568 2e-11 schizophrenia 15_84137308 rs66486766 ENSG00000225151.10 GOLGA2P7 -92828 2.46e-07 -0.653319 1e-11 schizophrenia 15_84137308 rs66486766 ENSG00000225151.10 GOLGA2P7 -92828 2.46e-07 -0.653319 5e-11 schizophrenia 15_84562751 rs12902973 ENSG00000225151.10 GOLGA2P7 332615 1.53e-06 -0.620074 4e-10 schizophrenia 15_84562751 rs12902973 ENSG00000225151.10 GOLGA2P7 332615 1.53e-06 -0.620074 9e-11 schizophrenia 15_84581411 rs11633534 ENSG00000225151.10 GOLGA2P7 351275 2.91e-07 -0.651781 8e-14 schizophrenia 15_84594463 rs11638445 ENSG00000225151.10 GOLGA2P7 364327 3.59e-07 -0.645187 3e-10 schizophrenia 16_11983775 rs12922317 ENSG00000234719.8 NPIPB2 7132 4e-16 0.94051 9e-07 schizophrenia 16_28874338 rs7359397 ENSG00000197165.10 SULT1A2 277229 1.1e-08 0.672549 7e-11 schizophrenia 16_28874338 rs7359397 ENSG00000196502.11 SULT1A1 250713 5.86e-07 -0.448065 7e-11 schizophrenia 16_28874338 rs7359397 ENSG00000178952.10 TUFM 27930 2.2e-08 0.29776 7e-11 schizophrenia 16_4419283 rs13335685 ENSG00000262246.5 CORO7 -6422 8.09e-08 0.470924 6e-10 schizophrenia 16_4420026 rs6500596 ENSG00000262246.5 CORO7 -5679 2.53e-12 0.614151 5e-09 schizophrenia 16_4420026 rs6500596 ENSG00000262246.5 CORO7 -5679 2.53e-12 0.614151 1e-06 schizophrenia 16_4420026 rs6500596 ENSG00000262246.5 CORO7 -5679 2.53e-12 0.614151 2e-07 schizophrenia 16_4447450 rs6500602 ENSG00000262246.5 CORO7 21745 3.05e-08 0.468936 3e-07 schizophrenia 16_69940756 rs3748386 ENSG00000226232.8 NPIPB14P -55432 9.08e-09 -0.515757 6e-09 schizophrenia 17_12993236 rs9908102 ENSG00000006744.18 ELAC2 -24951 1.42e-08 0.455487 2e-06 schizophrenia 17_2221430 rs2131700 ENSG00000167720.12 SRR -81953 2.1e-07 -0.396301 2e-08 schizophrenia 17_30556723 rs216452 ENSG00000264538.6 SUZ12P1 -152576 2.04e-07 0.431117 9e-06 schizophrenia 17_36544271 rs12941866 ENSG00000278535.4 DHRS11 -47527 2.94e-11 -0.529052 3e-08 schizophrenia 17_36544271 rs12941866 ENSG00000278259.4 MYO19 836 4.16e-07 -0.359936 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000214425.7 LRRC37A4P 116643 7.51e-19 0.954429 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000214401.4 KANSL1-AS1 -526598 1.25e-16 -0.883542 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000238083.7 LRRC37A2 -844533 1.39e-21 -1.01008 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000264070.1 DND1P1 81107 5.12e-12 -0.824248 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000185829.17 ARL17A -912704 8.32e-10 -0.785324 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000263503.1 MAPK8IP1P2 64638 7.14e-17 -1.00147 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000262500.1 MAPK8IP1P1 -576628 1.44e-15 -0.943638 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000204650.14 LINC02210 46650 1.23e-18 -0.770481 3e-08 schizophrenia 17_45666978 rs1635298 ENSG00000176681.14 LRRC37A -625755 3.7e-06 -0.615864 3e-08 schizophrenia 17_45779092 rs35076622 ENSG00000238083.7 LRRC37A2 -732419 3.26e-10 0.67674 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000264070.1 DND1P1 193221 3.47e-11 0.725805 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000263503.1 MAPK8IP1P2 176752 3.37e-10 0.732889 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000262500.1 MAPK8IP1P1 -464514 3.25e-11 0.745291 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000214401.4 KANSL1-AS1 -414484 2.43e-13 0.734473 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000204650.14 LINC02210 158764 5.14e-14 0.626515 3e-12 schizophrenia 17_45779092 rs35076622 ENSG00000214425.7 LRRC37A4P 228757 6.31e-13 -0.746586 3e-12 schizophrenia 17_46784796 rs199503 ENSG00000214401.4 KANSL1-AS1 591220 1.75e-23 1.01706 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000185829.17 ARL17A 205114 5.73e-08 0.720611 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000262500.1 MAPK8IP1P1 541190 3.55e-19 1.04066 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000176681.14 LRRC37A 492063 7.21e-06 0.610122 3e-09 schizophrenia 17_46784796 rs199503 ENSG00000238083.7 LRRC37A2 273285 6.89e-21 1.0175 3e-09 schizophrenia 17_48763179 rs7219021 ENSG00000159210.9 SNF8 -181938 7.64e-06 -0.298009 1e-07 schizophrenia 18_12947463 rs3809912 ENSG00000101639.18 CEP192 -43899 1.58e-18 -0.748828 1e-08 schizophrenia 2_129999731 rs13020137 ENSG00000225449.3 RAB6C-AS1 20068 4.73e-08 0.456119 5e-06 schizophrenia 2_232871534 rs2675968 ENSG00000182600.9 SNORC 2520 2.34e-06 0.449532 5e-06 schizophrenia 2_232878399 rs778371 ENSG00000182600.9 SNORC 9385 2.13e-06 0.462093 5e-12 schizophrenia 2_232878399 rs778371 ENSG00000182600.9 SNORC 9385 2.13e-06 0.462093 2e-13 schizophrenia 2_232878399 rs778371 ENSG00000182600.9 SNORC 9385 2.13e-06 0.462093 2e-08 schizophrenia 2_232878399 rs778371 ENSG00000182600.9 SNORC 9385 2.13e-06 0.462093 2e-13 schizophrenia 2_232878399 rs778371 ENSG00000182600.9 SNORC 9385 2.13e-06 0.462093 8e-12 schizophrenia 2_232878399 rs778371 ENSG00000182600.9 SNORC 9385 2.13e-06 0.462093 3e-15 schizophrenia 2_232878399 rs778371 ENSG00000182600.9 SNORC 9385 2.13e-06 0.462093 2e-12 schizophrenia 2_37323760 rs7584565 ENSG00000218739.9 CEBPZOS 127272 9.16e-07 -0.301856 9e-09 schizophrenia 2_37334786 rs2372993 ENSG00000218739.9 CEBPZOS 138298 8.73e-07 -0.300052 5e-07 schizophrenia 2_37334786 rs2372993 ENSG00000218739.9 CEBPZOS 138298 8.73e-07 -0.300052 7e-07 schizophrenia 2_37348993 rs3770752 ENSG00000218739.9 CEBPZOS 152505 8.99e-06 -0.31338 3e-06 schizophrenia 2_47993197 rs17396122 ENSG00000170802.15 FOXN2 -321440 1.7e-14 0.607256 1e-06 schizophrenia 2_48153579 rs12475492 ENSG00000170802.15 FOXN2 -161058 9.19e-19 0.636987 6e-09 schizophrenia 2_48422566 rs7565792 ENSG00000170802.15 FOXN2 107929 3.12e-08 -0.308951 7e-06 schizophrenia 21_20741130 rs34328150 ENSG00000224924.6 LINC00320 -62086 1.19e-08 -0.324069 4e-08 schizophrenia 22_41944504 rs1023497 ENSG00000198951.11 NAGA -126338 2e-05 -0.263614 9e-09 schizophrenia 22_41944504 rs1023497 ENSG00000183172.8 SMDT1 -135187 2.82e-05 -0.262777 9e-09 schizophrenia 22_41944504 rs1023497 ENSG00000205702.10 CYP2D7 -200073 1.09e-05 -0.371981 9e-09 schizophrenia 22_41944840 rs1023500 ENSG00000183172.8 SMDT1 -134851 1.24e-05 -0.271905 3e-08 schizophrenia 22_41944840 rs1023500 ENSG00000198951.11 NAGA -126002 2.09e-05 -0.261735 3e-08 schizophrenia 22_41944840 rs1023500 ENSG00000205702.10 CYP2D7 -199737 1.47e-05 -0.3651 3e-08 schizophrenia 22_41944840 rs1023500 ENSG00000183172.8 SMDT1 -134851 1.24e-05 -0.271905 8e-09 schizophrenia 22_41944840 rs1023500 ENSG00000198951.11 NAGA -126002 2.09e-05 -0.261735 8e-09 schizophrenia 22_41944840 rs1023500 ENSG00000205702.10 CYP2D7 -199737 1.47e-05 -0.3651 8e-09 schizophrenia 22_42141587 rs1800754 ENSG00000183066.14 WBP2NL 142862 2.99e-05 -0.401647 2e-15 schizophrenia 22_42141587 rs1800754 ENSG00000100197.20 CYP2D6 10681 8.79e-15 0.612658 2e-15 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 1.93e-08 -0.482487 1e-11 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 1.93e-08 -0.482487 5e-09 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 1.93e-08 -0.482487 3e-08 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 1.93e-08 -0.482487 1e-08 schizophrenia 22_42175022 rs760648 ENSG00000100197.20 CYP2D6 44116 1.93e-08 -0.482487 1e-10 schizophrenia 22_42207808 rs6002655 ENSG00000183066.14 WBP2NL 209083 7.37e-06 0.428489 1e-09 schizophrenia 22_42207808 rs6002655 ENSG00000183066.14 WBP2NL 209083 7.37e-06 0.428489 6e-10 schizophrenia 22_42207808 rs6002655 ENSG00000183066.14 WBP2NL 209083 7.37e-06 0.428489 5e-10 schizophrenia 22_42207808 rs6002655 ENSG00000183066.14 WBP2NL 209083 7.37e-06 0.428489 2e-09 schizophrenia 22_42207808 rs6002655 ENSG00000183066.14 WBP2NL 209083 7.37e-06 0.428489 1e-08 schizophrenia 22_42207808 rs6002655 ENSG00000183066.14 WBP2NL 209083 7.37e-06 0.428489 2e-14 schizophrenia 22_42207808 rs6002655 ENSG00000183066.14 WBP2NL 209083 7.37e-06 0.428489 2e-09 schizophrenia 3_107549762 rs9868075 ENSG00000241218.1 CSP2 220565 1.05e-05 0.44186 3e-08 schizophrenia 3_136095167 rs1278493 ENSG00000261758.1 STAG1-DT -657463 2.26e-06 -0.538414 1e-08 schizophrenia 3_136418580 rs10935182 ENSG00000261758.1 STAG1-DT -334050 7.37e-08 0.588269 7e-10 schizophrenia 3_136435986 rs66691851 ENSG00000261758.1 STAG1-DT -316644 1.33e-07 0.571827 2e-10 schizophrenia 3_136435986 rs66691851 ENSG00000261758.1 STAG1-DT -316644 1.33e-07 0.571827 4e-15 schizophrenia 3_136435986 rs66691851 ENSG00000261758.1 STAG1-DT -316644 1.33e-07 0.571827 4e-18 schizophrenia 3_136435986 rs66691851 ENSG00000261758.1 STAG1-DT -316644 1.33e-07 0.571827 2e-11 schizophrenia 3_136435986 rs66691851 ENSG00000261758.1 STAG1-DT -316644 1.33e-07 0.571827 2e-13 schizophrenia 3_136555593 rs7427564 ENSG00000261758.1 STAG1-DT -197037 1.06e-07 0.588867 2e-11 schizophrenia 3_136555593 rs7427564 ENSG00000261758.1 STAG1-DT -197037 1.06e-07 0.588867 2e-10 schizophrenia 3_136569563 rs7432375 ENSG00000261758.1 STAG1-DT -183067 8.65e-08 0.594287 7e-11 schizophrenia 3_136569563 rs7432375 ENSG00000261758.1 STAG1-DT -183067 8.65e-08 0.594287 3e-08 schizophrenia 3_136569563 rs7432375 ENSG00000261758.1 STAG1-DT -183067 8.65e-08 0.594287 6e-10 schizophrenia 3_136569563 rs7432375 ENSG00000261758.1 STAG1-DT -183067 8.65e-08 0.594287 4e-12 schizophrenia 3_136571687 rs10935185 ENSG00000261758.1 STAG1-DT -180943 8.65e-08 0.594287 5e-09 schizophrenia 3_136590868 rs940174 ENSG00000261758.1 STAG1-DT -161762 8.65e-08 0.594287 5e-10 schizophrenia 3_136590868 rs940174 ENSG00000261758.1 STAG1-DT -161762 8.65e-08 0.594287 3e-09 schizophrenia 3_136681578 rs7618871 ENSG00000261758.1 STAG1-DT -71052 8.65e-08 -0.594287 1e-08 schizophrenia 3_50002761 rs4688756 ENSG00000004534.14 RBM6 62754 0.000125699 -0.248691 2e-17 schizophrenia 3_50467964 rs2236989 ENSG00000004534.14 RBM6 527957 1.98e-05 0.325978 9e-09 schizophrenia 3_52234850 rs353547 ENSG00000055955.15 ITIH4 -595889 8.57e-06 -0.386338 4e-08 schizophrenia 3_52799203 rs2535629 ENSG00000055955.15 ITIH4 -31536 4.21e-08 0.505241 2e-11 schizophrenia 3_52799203 rs2535629 ENSG00000055955.15 ITIH4 -31536 4.21e-08 0.505241 3e-12 schizophrenia 3_52804386 rs4687552 ENSG00000055955.15 ITIH4 -26353 1.45e-09 0.545776 1e-08 schizophrenia 3_52821213 rs2239547 ENSG00000055955.15 ITIH4 -9526 3.14e-13 0.630758 6e-08 schizophrenia 3_53002190 rs2581794 ENSG00000242142.1 SERBP1P3 -62901 1.18e-07 0.491081 3e-07 schizophrenia 3_53108964 rs2115780 ENSG00000163933.9 RFT1 -21498 2.82e-06 -0.579679 4e-08 schizophrenia 3_53108964 rs2115780 ENSG00000242142.1 SERBP1P3 43873 1.09e-10 0.698048 4e-08 schizophrenia 4_175804069 rs7673823 ENSG00000249106.1 GPM6A-DT 13762 7.1e-09 -1.25276 5e-09 schizophrenia 4_175810250 rs12498839 ENSG00000249106.1 GPM6A-DT 19943 4.08e-09 -1.3012 2e-06 schizophrenia 4_37819057 rs2911914 ENSG00000169299.13 PGM2 -7576 7.26e-06 0.386293 7e-07 schizophrenia 4_37819057 rs2911914 ENSG00000169299.13 PGM2 -7576 7.26e-06 0.386293 2e-08 schizophrenia 4_42045761 rs34215985 ENSG00000014824.13 SLC30A9 55289 2.47e-07 -0.324001 3e-10 schizophrenia 4_57088393 rs11722333 ENSG00000163453.11 IGFBP7 -21992 9.44e-08 0.41195 7e-06 schizophrenia 5_116233060 rs253959 ENSG00000145781.8 COMMD10 147586 5.91e-07 -0.365459 8e-06 schizophrenia 5_140759116 rs7445192 ENSG00000239389.7 PCDHA13 -123527 2.74e-05 -0.364996 5e-07 schizophrenia 5_140767314 rs13168670 ENSG00000239389.7 PCDHA13 -115329 2.91e-05 0.363219 6e-08 schizophrenia 5_140767314 rs13168670 ENSG00000239389.7 PCDHA13 -115329 2.91e-05 0.363219 4e-07 schizophrenia 5_140774630 rs7733403 ENSG00000239389.7 PCDHA13 -108013 2.91e-05 0.363219 2e-08 schizophrenia 5_140774630 rs7733403 ENSG00000239389.7 PCDHA13 -108013 2.91e-05 0.363219 9e-11 schizophrenia 5_140774630 rs7733403 ENSG00000239389.7 PCDHA13 -108013 2.91e-05 0.363219 1e-08 schizophrenia 6_26196365 rs67575965 ENSG00000274750.2 H3C6 -27834 3.37e-05 0.47636 2e-09 schizophrenia 6_26196365 rs67575965 ENSG00000186470.13 BTN3A2 -168794 7e-07 -0.497499 2e-09 schizophrenia 6_26196365 rs67575965 ENSG00000274750.2 H3C6 -27834 3.37e-05 0.47636 2e-09 schizophrenia 6_26196365 rs67575965 ENSG00000186470.13 BTN3A2 -168794 7e-07 -0.497499 2e-09 schizophrenia 6_26408323 rs75782365 ENSG00000186470.13 BTN3A2 43164 5.54e-08 -0.886592 8e-24 schizophrenia 6_26408323 rs75782365 ENSG00000186470.13 BTN3A2 43164 5.54e-08 -0.886592 3e-25 schizophrenia 6_26408323 rs75782365 ENSG00000186470.13 BTN3A2 43164 5.54e-08 -0.886592 2e-27 schizophrenia 6_26409662 rs41266839 ENSG00000186470.13 BTN3A2 44503 5.54e-08 -0.886592 7e-27 schizophrenia 6_26466161 rs1977199 ENSG00000186470.13 BTN3A2 101002 5.24e-08 0.490304 1e-08 schizophrenia 6_26478024 rs34104395 ENSG00000186470.13 BTN3A2 112865 2.15e-10 -0.945161 9e-20 schizophrenia 6_26955320 rs9348739 ENSG00000186470.13 BTN3A2 590161 2.17e-05 -0.527987 5e-17 schizophrenia 6_27039908 rs35741362 ENSG00000186470.13 BTN3A2 674749 4.8e-05 -0.543331 2e-18 schizophrenia 6_27287188 rs13217239 ENSG00000216901.1 ZNF603P -889000 3.81e-05 0.546371 5e-14 schizophrenia 6_27287188 rs13217239 ENSG00000216901.1 ZNF603P -889000 3.81e-05 0.546371 4e-15 schizophrenia 6_27856988 rs200986 ENSG00000216901.1 ZNF603P -319200 2.25e-08 0.727023 2e-11 schizophrenia 6_27856988 rs200986 ENSG00000235109.7 ZSCAN31 -499283 3.5e-06 0.605894 2e-11 schizophrenia 6_28043874 rs202906 ENSG00000216901.1 ZNF603P -132314 4.57e-06 0.921014 3e-16 schizophrenia 6_28195002 rs1150688 ENSG00000197062.11 ZSCAN26 -72008 3.99e-05 -0.382699 8e-11 schizophrenia 6_28195002 rs1150688 ENSG00000216901.1 ZNF603P 18814 2.08e-25 1.0538 8e-11 schizophrenia 6_28195002 rs1150688 ENSG00000235109.7 ZSCAN31 -161269 3.72e-07 0.60367 8e-11 schizophrenia 6_28230108 rs34787248 ENSG00000235109.7 ZSCAN31 -126163 4.89e-05 0.664519 2e-11 schizophrenia 6_28230108 rs34787248 ENSG00000216901.1 ZNF603P 53920 3.25e-07 0.832272 2e-11 schizophrenia 6_28357424 rs6921919 ENSG00000216901.1 ZNF603P 181236 6.03e-08 0.776103 1e-19 schizophrenia 6_28432761 rs7766356 ENSG00000216901.1 ZNF603P 256573 1.9e-08 0.880875 3e-21 schizophrenia 6_28447190 rs16894116 ENSG00000216901.1 ZNF603P 271002 7.83e-08 0.787917 3e-21 schizophrenia 6_28594812 rs115031589 ENSG00000216901.1 ZNF603P 418624 2.7e-09 0.841706 3e-20 schizophrenia 6_28610509 rs116663187 ENSG00000216901.1 ZNF603P 434321 4.44e-09 0.81382 2e-15 schizophrenia 6_28691630 rs144911693 ENSG00000197062.11 ZSCAN26 424620 2.22e-05 -0.419727 5e-14 schizophrenia 6_28691630 rs144911693 ENSG00000216901.1 ZNF603P 515442 1.24e-05 0.571718 5e-14 schizophrenia 6_29150075 rs144649399 ENSG00000235109.7 ZSCAN31 793804 0.000108227 0.625872 1e-12 schizophrenia 6_29638984 rs138488080 ENSG00000230795.3 HLA-K -288194 1.8e-06 -0.73769 3e-16 schizophrenia 6_29639270 rs114041423 ENSG00000230795.3 HLA-K -287908 1.8e-09 -0.797155 1e-15 schizophrenia 6_29642504 rs115374247 ENSG00000230795.3 HLA-K -284674 1.91e-06 -0.539425 2e-13 schizophrenia 6_29642504 rs115374247 ENSG00000230795.3 HLA-K -284674 1.91e-06 -0.539425 2e-13 schizophrenia 6_29660317 rs143363269 ENSG00000230795.3 HLA-K -266861 4.67e-09 -0.784843 1e-10 schizophrenia 6_29660317 rs143363269 ENSG00000230795.3 HLA-K -266861 4.67e-09 -0.784843 1e-10 schizophrenia 6_29681770 rs385492 ENSG00000235821.1 IFITM4P -69378 1.1e-05 -0.459945 1e-08 schizophrenia 6_29681770 rs385492 ENSG00000235821.1 IFITM4P -69378 1.1e-05 -0.459945 4e-09 schizophrenia 6_29696112 rs3131888 ENSG00000230795.3 HLA-K -231066 5.19e-07 -0.54185 7e-06 schizophrenia 6_29783215 rs144018888 ENSG00000204623.9 ZNRD1ASP -278038 3.66e-05 -0.324672 3e-12 schizophrenia 6_29783228 rs144373461 ENSG00000204623.9 ZNRD1ASP -278025 2.07e-05 -0.34648 2e-17 schizophrenia 6_29783228 rs144373461 ENSG00000204623.9 ZNRD1ASP -278025 2.07e-05 -0.34648 6e-16 schizophrenia 6_29783228 rs144373461 ENSG00000204623.9 ZNRD1ASP -278025 2.07e-05 -0.34648 1e-17 schizophrenia 6_29783976 rs142425863 ENSG00000204623.9 ZNRD1ASP -277277 1.29e-07 -0.412201 5e-11 schizophrenia 6_29783976 rs142425863 ENSG00000176998.4 HCG4 -8460 2.29e-06 -0.560034 5e-11 schizophrenia 6_29842049 rs116326873 ENSG00000228022.5 HCG20 -924776 1.41e-05 -0.56497 2e-17 schizophrenia 6_29955302 rs111312615 ENSG00000204622.11 HLA-J -50669 4.01e-07 -0.638979 4e-12 schizophrenia 6_29955302 rs111312615 ENSG00000228078.1 HLA-U 21201 4.46e-06 0.687851 4e-12 schizophrenia 6_29955302 rs111312615 ENSG00000204622.11 HLA-J -50669 4.01e-07 -0.638979 1e-11 schizophrenia 6_29955302 rs111312615 ENSG00000228078.1 HLA-U 21201 4.46e-06 0.687851 1e-11 schizophrenia 6_29972902 rs114204022 ENSG00000230795.3 HLA-K 45724 1.74e-15 -0.962548 5e-11 schizophrenia 6_29972902 rs114204022 ENSG00000206341.7 HLA-H 84435 4.78e-05 0.509171 5e-11 schizophrenia 6_29983056 rs114950038 ENSG00000204623.9 ZNRD1ASP -78197 8.98e-10 -0.493927 2e-12 schizophrenia 6_30197496 rs2523722 ENSG00000270604.5 HCG17 -56968 1.07e-05 -0.613382 1e-16 schizophrenia 6_30202733 rs116408368 ENSG00000270604.5 HCG17 -51731 1.21e-05 -0.599269 1e-21 schizophrenia 6_30202733 rs116408368 ENSG00000270604.5 HCG17 -51731 1.21e-05 -0.599269 7e-17 schizophrenia 6_30206354 rs2021722 ENSG00000270604.5 HCG17 -48110 1.21e-05 -0.599269 2e-12 schizophrenia 6_30206354 rs2021722 ENSG00000270604.5 HCG17 -48110 1.21e-05 -0.599269 2e-12 schizophrenia 6_30397852 rs115687605 ENSG00000230795.3 HLA-K 470674 5.26e-06 -0.731341 2e-15 schizophrenia 6_30397852 rs115687605 ENSG00000230795.3 HLA-K 470674 5.26e-06 -0.731341 3e-13 schizophrenia 6_30762562 rs150430679 ENSG00000228022.5 HCG20 -4263 8.43e-07 -0.676175 3e-13 schizophrenia 6_30888130 rs116552815 ENSG00000228022.5 HCG20 121305 3.21e-05 -0.554966 1e-08 schizophrenia 6_30888130 rs116552815 ENSG00000137411.16 VARS2 -26075 4.2e-07 -0.43686 1e-08 schizophrenia 6_30937536 rs114838832 ENSG00000137411.16 VARS2 23331 7.9e-09 -0.491562 2e-10 schizophrenia 6_30964067 rs114867672 ENSG00000137411.16 VARS2 49862 1.22e-05 -0.512472 2e-16 schizophrenia 6_31137370 rs149979052 ENSG00000204338.8 CYP21A1P -868319 3.62e-06 -0.752762 7e-14 schizophrenia 6_31137370 rs149979052 ENSG00000204338.8 CYP21A1P -868319 3.62e-06 -0.752762 7e-19 schizophrenia 6_31219298 rs114276265 ENSG00000228022.5 HCG20 452473 1.4e-05 -0.638922 4e-16 schizophrenia 6_31222761 rs116067082 ENSG00000204531.17 POU5F1 42030 6.55e-07 -0.658483 4e-11 schizophrenia 6_31245806 rs114142645 ENSG00000204531.17 POU5F1 65075 4.58e-06 0.596316 2e-08 schizophrenia 6_31254404 rs1793889 ENSG00000228022.5 HCG20 487579 1.04e-05 -0.613599 1e-11 schizophrenia 6_31268274 rs111977918 ENSG00000204525.16 HLA-C -3831 1.39e-07 -0.487127 2e-08 schizophrenia 6_31300843 rs114274203 ENSG00000204525.16 HLA-C 28738 1.29e-10 -0.58215 3e-12 schizophrenia 6_31345252 rs116509918 ENSG00000204338.8 CYP21A1P -660437 2.74e-07 -0.790261 6e-20 schizophrenia 6_31345252 rs116509918 ENSG00000244731.7 C4A -636772 3.02e-05 -0.467707 6e-20 schizophrenia 6_31353490 rs2596500 ENSG00000204338.8 CYP21A1P -652199 4.84e-06 -0.70005 8e-20 schizophrenia 6_31380300 rs114904464 ENSG00000204338.8 CYP21A1P -625389 1.06e-06 -0.72557 3e-15 schizophrenia 6_31383745 rs114291394 ENSG00000204525.16 HLA-C 111640 3.13e-07 -0.511177 2e-10 schizophrenia 6_31481775 rs140502984 ENSG00000204338.8 CYP21A1P -523914 1.43e-06 -0.787691 5e-15 schizophrenia 6_31481775 rs140502984 ENSG00000244731.7 C4A -500249 3.23e-05 -0.491795 5e-15 schizophrenia 6_31635190 rs1046089 ENSG00000204428.12 LY6G5C -48850 1.32e-11 -0.770043 4e-06 schizophrenia 6_31635190 rs1046089 ENSG00000240053.8 LY6G5B -34977 3.75e-06 -0.31413 4e-06 schizophrenia 6_31758911 rs707939 ENSG00000204463.12 BAG6 106206 9.84e-09 0.492041 4e-12 schizophrenia 6_31819390 rs142536810 ENSG00000204338.8 CYP21A1P -186299 1.03e-09 -1.07141 5e-20 schizophrenia 6_31819390 rs142536810 ENSG00000244731.7 C4A -162634 2.91e-07 -0.659098 5e-20 schizophrenia 6_31858928 rs67682613 ENSG00000204338.8 CYP21A1P -146761 4.05e-06 -0.751419 7e-19 schizophrenia 6_31858928 rs67682613 ENSG00000244731.7 C4A -123096 9.87e-08 -0.610218 7e-19 schizophrenia 6_31913532 rs116385615 ENSG00000244731.7 C4A -68492 2.97e-06 -0.487927 2e-16 schizophrenia 6_31913532 rs116385615 ENSG00000204338.8 CYP21A1P -92157 1.01e-07 -0.766966 2e-16 schizophrenia 6_31940060 rs2293751 ENSG00000231852.6 CYP21A2 -98205 5.5e-06 0.428813 3e-08 schizophrenia 6_31977869 rs2734325 ENSG00000204338.8 CYP21A1P -27820 1.2e-07 0.561507 3e-07 schizophrenia 6_31979683 rs389883 ENSG00000204338.8 CYP21A1P -26006 7.53e-08 0.601158 1e-12 schizophrenia 6_31979683 rs389883 ENSG00000196126.11 HLA-DRB1 -610165 1.86e-05 -0.257602 1e-12 schizophrenia 6_31979683 rs389883 ENSG00000198502.5 HLA-DRB5 -550604 1.27e-05 -0.450778 1e-12 schizophrenia 6_32058086 rs369637 ENSG00000204338.8 CYP21A1P 52397 3.5e-10 -0.998752 2e-10 schizophrenia 6_32058086 rs369637 ENSG00000244731.7 C4A 76062 2.82e-06 -0.554059 2e-10 schizophrenia 6_32082981 rs1150754 ENSG00000244731.7 C4A 100957 2.82e-06 -0.554059 3e-12 schizophrenia 6_32082981 rs1150754 ENSG00000204338.8 CYP21A1P 77292 3.5e-10 -0.998752 3e-12 schizophrenia 6_32147408 rs145076523 ENSG00000244731.7 C4A 165384 3.43e-08 -0.515435 5e-13 schizophrenia 6_32186508 rs114810457 ENSG00000244731.7 C4A 204484 2.62e-05 -0.407855 5e-10 schizophrenia 6_32197667 rs115344853 ENSG00000244731.7 C4A 215643 1.52e-08 -0.592535 4e-14 schizophrenia 6_32197667 rs115344853 ENSG00000204338.8 CYP21A1P 191978 3.96e-05 -0.624166 4e-14 schizophrenia 6_32197667 rs115344853 ENSG00000244731.7 C4A 215643 1.52e-08 -0.592535 2e-17 schizophrenia 6_32197667 rs115344853 ENSG00000204338.8 CYP21A1P 191978 3.96e-05 -0.624166 2e-17 schizophrenia 6_32203298 rs3132935 ENSG00000244731.7 C4A 221274 1.73e-07 -0.496321 5e-07 schizophrenia 6_32203298 rs3132935 ENSG00000244731.7 C4A 221274 1.73e-07 -0.496321 3e-07 schizophrenia 6_32205216 rs3131296 ENSG00000204338.8 CYP21A1P 199527 3.88e-08 -0.896408 2e-10 schizophrenia 6_32205216 rs3131296 ENSG00000244731.7 C4A 223192 8.35e-10 -0.70275 2e-10 schizophrenia 6_32228798 rs142601889 ENSG00000198502.5 HLA-DRB5 -301489 6.06e-06 -0.416976 4e-11 schizophrenia 6_32238466 rs145547914 ENSG00000244731.7 C4A 256442 9.8e-08 -0.572725 3e-15 schizophrenia 6_32238466 rs145547914 ENSG00000204338.8 CYP21A1P 232777 2.67e-06 -0.716903 3e-15 schizophrenia 6_32239404 rs115165987 ENSG00000244731.7 C4A 257380 3.33e-05 -0.396595 5e-11 schizophrenia 6_32381780 rs115035678 ENSG00000204338.8 CYP21A1P 376091 3.77e-08 -0.950883 1e-14 schizophrenia 6_32381780 rs115035678 ENSG00000244731.7 C4A 399756 6.07e-08 -0.669951 1e-14 schizophrenia 6_32390493 rs3117099 ENSG00000244731.7 C4A 408469 2.38e-05 -0.392782 3e-06 schizophrenia 6_32464869 rs115406947 ENSG00000244731.7 C4A 482845 4.11e-07 -0.573481 2e-18 schizophrenia 6_32464869 rs115406947 ENSG00000204338.8 CYP21A1P 459180 3.12e-05 -0.673402 2e-18 schizophrenia 6_32534622 rs180778602 ENSG00000244731.7 C4A 552598 7.17e-08 -0.565734 4e-12 schizophrenia 6_32534622 rs180778602 ENSG00000204338.8 CYP21A1P 528933 4.59e-08 -0.802413 4e-12 schizophrenia 6_32582137 rs142790902 ENSG00000244731.7 C4A 600113 2.14e-05 -0.590842 1e-11 schizophrenia 6_32584671 rs11753207 ENSG00000244731.7 C4A 602647 1.04e-06 -0.587534 3e-11 schizophrenia 6_32584671 rs11753207 ENSG00000204338.8 CYP21A1P 578982 1.96e-05 -0.728801 3e-11 schizophrenia 6_32597688 rs2760981 ENSG00000198502.5 HLA-DRB5 67401 6.51e-10 -0.559901 4e-11 schizophrenia 6_32614112 rs4530903 ENSG00000232629.8 HLA-DQB2 -149422 1.22e-05 -0.759664 5e-06 schizophrenia 6_32634492 rs9272219 ENSG00000232629.8 HLA-DQB2 -129042 7.23e-08 0.600441 7e-08 schizophrenia 6_32635879 rs116139966 ENSG00000232629.8 HLA-DQB2 -127655 1.01e-07 0.578603 1e-09 schizophrenia 6_32668221 rs9274623 ENSG00000179344.16 HLA-DQB1 -162 2.16e-05 -0.49014 6e-19 schizophrenia 6_32668221 rs9274623 ENSG00000244731.7 C4A 686197 8.15e-08 -0.48219 6e-19 schizophrenia 6_32668221 rs9274623 ENSG00000204338.8 CYP21A1P 662532 1.05e-06 -0.621689 6e-19 schizophrenia 6_32668836 rs147875011 ENSG00000232629.8 HLA-DQB2 -94698 8.69e-08 0.575903 3e-10 schizophrenia 6_32668836 rs147875011 ENSG00000179344.16 HLA-DQB1 453 4.74e-10 -0.574066 3e-10 schizophrenia 6_32706552 rs114771361 ENSG00000237541.3 HLA-DQA2 -34790 2.04e-05 0.454549 5e-10 schizophrenia 6_32707332 rs9275524 ENSG00000229391.7 HLA-DRB6 147310 1.07e-07 0.492459 2e-07 schizophrenia 6_32707332 rs9275524 ENSG00000237541.3 HLA-DQA2 -34010 3.16e-07 0.567129 2e-07 schizophrenia 6_32707332 rs9275524 ENSG00000179344.16 HLA-DQB1 38949 2.23e-05 -0.389758 2e-07 schizophrenia 6_32707332 rs9275524 ENSG00000223534.1 HLA-DQB1-AS1 46977 5.05e-07 -0.515219 2e-07 schizophrenia 6_32936262 rs115497191 ENSG00000204257.14 HLA-DMA -32832 1.86e-06 0.527639 4e-14 schizophrenia 6_32945469 rs1480380 ENSG00000204257.14 HLA-DMA -23625 8.33e-07 0.535605 6e-07 schizophrenia 6_32946949 rs73396800 ENSG00000204257.14 HLA-DMA -22145 2.81e-06 0.540338 4e-16 schizophrenia 7_2238591 rs7799006 ENSG00000122687.17 MRM2 -3607 7.29e-06 0.381582 5e-06 schizophrenia 7_23871880 rs2106747 ENSG00000188732.10 FAM221A 191750 4.45e-06 -0.499412 3e-08 schizophrenia 7_23876057 rs10262624 ENSG00000188732.10 FAM221A 195927 4.45e-06 -0.499412 2e-06 schizophrenia 7_76335026 rs2961033 ENSG00000146707.14 POMZP3 -290657 3.1e-09 -0.91438 5e-07 schizophrenia 8_142276955 rs72687362 ENSG00000171045.14 TSNARE1 -126285 9.23e-06 -0.426811 4e-09 schizophrenia 8_143572424 rs4873803 ENSG00000147813.15 NAPRT -5933 5.84e-12 0.721435 1e-09 schizophrenia 8_143573145 rs10866912 ENSG00000147813.15 NAPRT -5212 3.83e-10 0.669072 4e-08 schizophrenia 8_8234503 rs2980436 ENSG00000173295.7 FAM86B3P 5908 1.38e-05 -0.453464 2e-08 schizophrenia 8_8234503 rs2980436 ENSG00000253893.2 FAM85B 7889 2.11e-17 -0.970495 2e-08 schizophrenia 8_8234503 rs2980436 ENSG00000173295.7 FAM86B3P 5908 1.38e-05 -0.453464 4e-07 schizophrenia 8_8234503 rs2980436 ENSG00000253893.2 FAM85B 7889 2.11e-17 -0.970495 4e-07 schizophrenia 8_8234883 rs1878561 ENSG00000253893.2 FAM85B 8269 1.11e-17 -0.933847 1e-07 schizophrenia 8_8234883 rs1878561 ENSG00000173295.7 FAM86B3P 6288 2.02e-07 -0.50886 1e-07 schizophrenia 8_8240516 rs2945232 ENSG00000253893.2 FAM85B 13902 1.59e-18 -0.950254 2e-08 schizophrenia 8_8240516 rs2945232 ENSG00000173295.7 FAM86B3P 11921 9.6e-06 -0.440935 2e-08 schizophrenia 8_8517326 rs12546760 ENSG00000253893.2 FAM85B 290712 2.33e-07 -0.614034 4e-08 schizophrenia 8_9176638 rs367543 ENSG00000253893.2 FAM85B 950024 2.64e-10 -0.750988 8e-06 schizophrenia X_153942092 rs2269372 ENSG00000177854.7 TMEM187 -30235 8.41e-08 -0.395734 4e-08