DISEASE CHR_POS SNPS ENSEMBLE_ID GENE_NAME TSS_DISTANCE GTEx_PVALUE GTEx_SLOPE GWAS_PVALUE type 2 diabetes 1_219487193 rs2820426 ENSG00000228536.2 LYPLAL1-AS1 27824 1.37e-07 -0.664775 1e-12 type 2 diabetes 10_100152307 rs2862954 ENSG00000095485.16 CWF19L1 -115373 1.72e-06 0.653567 2e-10 type 2 diabetes 10_100152437 rs1408579 ENSG00000095485.16 CWF19L1 -115243 1.72e-06 0.653567 6e-11 type 2 diabetes 10_100216744 rs11591741 ENSG00000095485.16 CWF19L1 -50936 4.32e-08 0.755747 1e-09 type 2 diabetes 11_119082492 rs7127212 ENSG00000256269.7 HMBS -2374 2.09e-06 0.515109 2e-08 type 2 diabetes 11_34887233 rs2956092 ENSG00000149089.12 APIP -29266 3.72e-07 0.709003 2e-10 type 2 diabetes 11_43856384 rs1061810 ENSG00000149084.12 HSD17B12 175704 2.12e-09 -0.714389 6e-13 type 2 diabetes 11_43856384 rs1061810 ENSG00000149084.12 HSD17B12 175704 2.12e-09 -0.714389 4e-10 type 2 diabetes 11_43856909 rs35251247 ENSG00000149084.12 HSD17B12 176229 9.59e-10 -0.73641 2e-13 type 2 diabetes 11_74914952 rs480840 ENSG00000241170.2 RPL31P46 38666 1.57e-07 0.644699 4e-08 type 2 diabetes 11_74914952 rs480840 ENSG00000166435.15 XRRA1 -34248 2.09e-06 -0.729637 4e-08 type 2 diabetes 12_56049558 rs11171731 ENSG00000197728.9 RPS26 7705 2.11e-06 -0.714453 9e-06 type 2 diabetes 12_56076841 rs11171739 ENSG00000197728.9 RPS26 34988 3.53e-19 -1.05308 1e-18 type 2 diabetes 13_22015744 rs9316706 ENSG00000230535.1 BASP1P1 -882261 8.14e-07 -0.683636 3e-09 type 2 diabetes 15_43602920 rs2447198 ENSG00000168803.14 ADAL 272246 8.08e-06 -0.406282 5e-10 type 2 diabetes 15_75449754 rs8038760 ENSG00000140400.16 MAN2C1 81600 2.53e-09 0.840611 2e-11 type 2 diabetes 15_75522047 rs6495182 ENSG00000140400.16 MAN2C1 153893 1.28e-09 0.869077 2e-22 type 2 diabetes 15_75522047 rs6495182 ENSG00000140400.16 MAN2C1 153893 1.28e-09 0.869077 3e-14 type 2 diabetes 15_75635851 rs7166281 ENSG00000140400.16 MAN2C1 267697 1.71e-09 0.758247 1e-07 type 2 diabetes 15_75639788 rs13737 ENSG00000140400.16 MAN2C1 271634 3.39e-09 0.778804 6e-10 type 2 diabetes 15_82793121 rs36111056 ENSG00000103723.12 AP3B2 83207 1.7e-06 0.72607 1e-08 type 2 diabetes 15_82793121 rs36111056 ENSG00000103723.12 AP3B2 83207 1.7e-06 0.72607 2e-09 type 2 diabetes 15_89828835 rs4932143 ENSG00000157823.16 AP3S2 -65803 5.48e-08 -0.540451 6e-11 type 2 diabetes 15_89831025 rs2028299 ENSG00000157823.16 AP3S2 -63613 1.39e-08 -0.567727 5e-07 type 2 diabetes 15_89831025 rs2028299 ENSG00000157823.16 AP3S2 -63613 1.39e-08 -0.567727 4e-08 type 2 diabetes 15_89831025 rs2028299 ENSG00000157823.16 AP3S2 -63613 1.39e-08 -0.567727 2e-11 type 2 diabetes 15_89831025 rs2028299 ENSG00000157823.16 AP3S2 -63613 1.39e-08 -0.567727 3e-06 type 2 diabetes 15_89836982 rs8031576 ENSG00000157823.16 AP3S2 -57656 1.26e-08 -0.569173 2e-09 type 2 diabetes 15_89836982 rs8031576 ENSG00000157823.16 AP3S2 -57656 1.26e-08 -0.569173 2e-29 type 2 diabetes 15_89838046 rs893617 ENSG00000157823.16 AP3S2 -56592 1.39e-08 -0.567727 2e-38 type 2 diabetes 15_89840813 rs2351707 ENSG00000157823.16 AP3S2 -53825 1.39e-08 -0.567727 9e-16 type 2 diabetes 15_89873508 rs7163629 ENSG00000157823.16 AP3S2 -21130 9.43e-08 -0.54487 1e-09 type 2 diabetes 15_89880061 rs4932265 ENSG00000157823.16 AP3S2 -14577 9.66e-08 -0.552 4e-20 type 2 diabetes 15_89885662 rs10852123 ENSG00000157823.16 AP3S2 -8976 9.66e-08 -0.552 8e-13 type 2 diabetes 15_89885916 rs12912009 ENSG00000157823.16 AP3S2 -8722 2.31e-08 -0.555448 3e-09 type 2 diabetes 15_89885916 rs12912009 ENSG00000157823.16 AP3S2 -8722 2.31e-08 -0.555448 4e-06 type 2 diabetes 15_89891656 rs7174878 ENSG00000157823.16 AP3S2 -2982 1.45e-07 -0.55215 4e-08 type 2 diabetes 16_15059860 rs9927842 ENSG00000188599.17 NPIPP1 -63638 1.21e-06 -0.633283 7e-10 type 2 diabetes 16_15059860 rs9927842 ENSG00000188599.17 NPIPP1 -63638 1.21e-06 -0.633283 7e-09 type 2 diabetes 16_70626340 rs13330163 ENSG00000255185.5 PDXDC2P 560395 1.1e-05 0.440955 4e-08 type 2 diabetes 17_46006582 rs8067056 ENSG00000204650.14 LINC02210 386254 9.81e-06 0.708878 3e-08 type 2 diabetes 17_46006582 rs8067056 ENSG00000214425.7 LRRC37A4P 456247 1.87e-06 -0.792274 3e-08 type 2 diabetes 17_48046964 rs9900074 ENSG00000167183.2 PRR15L 89086 1.62e-06 -0.920509 3e-10 type 2 diabetes 17_50559173 rs989128 ENSG00000006282.20 SPATA20 12867 4.05e-10 -0.825809 4e-06 type 2 diabetes 2_134722410 rs6723108 ENSG00000152128.13 TMEM163 3410 1.35e-08 -0.826282 7e-08 type 2 diabetes 3_49958085 rs6792892 ENSG00000004534.14 RBM6 18078 4.84e-08 -0.495757 1e-14 type 2 diabetes 3_53091413 rs62255926 ENSG00000242142.1 SERBP1P3 26322 1.57e-10 -0.85116 4e-08 type 2 diabetes 3_53093661 rs2581787 ENSG00000242142.1 SERBP1P3 28570 2.47e-10 0.808791 3e-08 type 2 diabetes 3_53093661 rs2581787 ENSG00000242142.1 SERBP1P3 28570 2.47e-10 0.808791 2e-08 type 2 diabetes 5_56808481 rs10461617 ENSG00000155542.11 SETD9 -100779 1.57e-07 0.780899 4e-06 type 2 diabetes 5_56900777 rs96844 ENSG00000155542.11 SETD9 -8483 8.03e-07 0.62241 5e-08 type 2 diabetes 6_32460338 rs115918645 ENSG00000237541.3 HLA-DQA2 -281004 2.97e-07 0.830906 1e-11 type 2 diabetes 6_32605638 rs601945 ENSG00000237541.3 HLA-DQA2 -135704 1.82e-07 1.28488 5e-08 type 2 diabetes 6_32626532 rs9271774 ENSG00000229391.7 HLA-DRB6 66510 1.48e-06 0.927186 1e-09 type 2 diabetes 6_32626532 rs9271774 ENSG00000198502.5 HLA-DRB5 96245 2.64e-07 -1.12704 1e-09 type 2 diabetes 6_32634705 rs3104369 ENSG00000179344.16 HLA-DQB1 -33678 2.64e-07 -0.857253 9e-15 type 2 diabetes 6_32659937 rs1063355 ENSG00000223534.1 HLA-DQB1-AS1 -418 5.92e-06 -0.734527 4e-19 type 2 diabetes 6_32659937 rs1063355 ENSG00000232629.8 HLA-DQB2 -103597 5.31e-10 0.952278 4e-19 type 2 diabetes 6_32659937 rs1063355 ENSG00000179344.16 HLA-DQB1 -8446 1.8e-12 -0.902025 4e-19 type 2 diabetes 6_32686937 rs9275184 ENSG00000237541.3 HLA-DQA2 -54405 7.98e-06 1.23318 6e-24 type 2 diabetes 7_55734370 rs6972291 ENSG00000226278.1 PSPHP1 -30427 2.71e-24 1.18292 2e-09 type 2 diabetes 7_7210116 rs11763876 ENSG00000106392.10 C1GALT1 53182 4.17e-08 0.849192 7e-08 type 2 diabetes 7_74674569 rs35473599 ENSG00000263001.5 GTF2I 16902 4.21e-06 -0.403975 3e-09 type 2 diabetes 7_74693803 rs67755137 ENSG00000263001.5 GTF2I 36136 4.1e-07 -0.451362 2e-08 type 2 diabetes 9_133261662 rs687621 ENSG00000175164.13 ABO -13552 2.23e-08 -0.730571 1e-08 type 2 diabetes 9_133269828 rs495203 ENSG00000175164.13 ABO -5386 1.63e-08 -0.742182 1e-24 type 2 diabetes 9_133271745 rs554833 ENSG00000175164.13 ABO -3469 1.63e-08 -0.742182 4e-12 type 2 diabetes 9_133273813 rs505922 ENSG00000175164.13 ABO -1401 1.63e-08 -0.742182 5e-08 type 2 diabetes 9_133273813 rs505922 ENSG00000175164.13 ABO -1401 1.63e-08 -0.742182 4e-12 type 2 diabetes 9_133274084 rs529565 ENSG00000175164.13 ABO -1130 1.63e-08 -0.742182 2e-10 type 2 diabetes 9_133274084 rs529565 ENSG00000175164.13 ABO -1130 1.63e-08 -0.742182 8e-27 type 2 diabetes X_57952919 rs73226048 ENSG00000231831.1 MTHFD1P1 557510 2.94e-06 0.693654 2e-17