DISEASE	CHR_POS	SNPS	ENSEMBLE_ID	GENE_NAME	TSS_DISTANCE	GTEx_PVALUE	GTEx_SLOPE	GWAS_PVALUE
type 2 diabetes	1_149919476	rs72692804	ENSG00000159164.9	SV2A	1594	6.41e-07	-0.824765	3e-10
type 2 diabetes	1_149922463	rs72692805	ENSG00000159164.9	SV2A	4581	6.41e-07	-0.824765	6e-10
type 2 diabetes	1_205075211	rs11240351	ENSG00000133059.16	DSTYK	-136355	9.96e-06	-0.251691	1e-10
type 2 diabetes	10_100060908	rs12782078	ENSG00000095485.16	CWF19L1	-206772	3.56e-07	0.462336	2e-08
type 2 diabetes	10_100152307	rs2862954	ENSG00000095485.16	CWF19L1	-115373	2.78e-09	0.467734	2e-10
type 2 diabetes	10_100152437	rs1408579	ENSG00000095485.16	CWF19L1	-115243	2.78e-09	0.467734	6e-11
type 2 diabetes	10_100216744	rs11591741	ENSG00000095485.16	CWF19L1	-50936	1.02e-11	0.53097	1e-09
type 2 diabetes	10_73834292	rs2633310	ENSG00000196968.10	FUT11	61429	2.39e-05	-0.35871	2e-08
type 2 diabetes	10_73838341	rs2633311	ENSG00000196968.10	FUT11	65478	3.87e-05	-0.34725	3e-09
type 2 diabetes	10_73839369	rs2675662	ENSG00000196968.10	FUT11	66506	2.39e-05	-0.35871	8e-09
type 2 diabetes	10_97296433	rs10748694	ENSG00000187122.16	SLIT1	110513	3.51e-07	-0.408351	2e-10
type 2 diabetes	10_97296433	rs10748694	ENSG00000187122.16	SLIT1	110513	3.51e-07	-0.408351	2e-07
type 2 diabetes	10_97297164	rs10736116	ENSG00000187122.16	SLIT1	111244	9.74e-07	-0.388666	9e-11
type 2 diabetes	10_97299888	rs10882891	ENSG00000187122.16	SLIT1	113968	1.02e-06	-0.397664	2e-11
type 2 diabetes	10_97324003	rs6584116	ENSG00000187122.16	SLIT1	138083	1.49e-05	0.38544	3e-11
type 2 diabetes	10_97331612	rs945187	ENSG00000187122.16	SLIT1	145692	9.33e-07	-0.399705	8e-16
type 2 diabetes	11_119082492	rs7127212	ENSG00000256269.7	HMBS	-2374	3.05e-07	0.224992	2e-08
type 2 diabetes	11_17350896	rs7928810	ENSG00000188211.8	NCR3LG1	-830	6.11e-07	0.516224	2e-12
type 2 diabetes	11_17383292	rs10734252	ENSG00000188211.8	NCR3LG1	31566	2.05e-06	0.498821	4e-10
type 2 diabetes	11_17387083	rs5215	ENSG00000188211.8	NCR3LG1	35357	1.4e-05	0.457828	5e-11
type 2 diabetes	11_17387083	rs5215	ENSG00000188211.8	NCR3LG1	35357	1.4e-05	0.457828	9e-10
type 2 diabetes	11_17387083	rs5215	ENSG00000188211.8	NCR3LG1	35357	1.4e-05	0.457828	3e-11
type 2 diabetes	11_17387083	rs5215	ENSG00000188211.8	NCR3LG1	35357	1.4e-05	0.457828	2e-12
type 2 diabetes	11_17387083	rs5215	ENSG00000188211.8	NCR3LG1	35357	1.4e-05	0.457828	2e-22
type 2 diabetes	11_17387083	rs5215	ENSG00000188211.8	NCR3LG1	35357	1.4e-05	0.457828	5e-22
type 2 diabetes	11_17387083	rs5215	ENSG00000188211.8	NCR3LG1	35357	1.4e-05	0.457828	1e-20
type 2 diabetes	11_17387083	rs5215	ENSG00000188211.8	NCR3LG1	35357	1.4e-05	0.457828	2e-20
type 2 diabetes	11_17387083	rs5215	ENSG00000188211.8	NCR3LG1	35357	1.4e-05	0.457828	4e-17
type 2 diabetes	11_17387083	rs5215	ENSG00000188211.8	NCR3LG1	35357	1.4e-05	0.457828	4e-07
type 2 diabetes	11_17387083	rs5215	ENSG00000188211.8	NCR3LG1	35357	1.4e-05	0.457828	1e-11
type 2 diabetes	11_17387083	rs5215	ENSG00000188211.8	NCR3LG1	35357	1.4e-05	0.457828	8e-14
type 2 diabetes	11_17388025	rs5219	ENSG00000188211.8	NCR3LG1	36299	1.4e-05	0.457828	4e-06
type 2 diabetes	11_17388025	rs5219	ENSG00000188211.8	NCR3LG1	36299	1.4e-05	0.457828	7e-11
type 2 diabetes	11_17388025	rs5219	ENSG00000188211.8	NCR3LG1	36299	1.4e-05	0.457828	5e-07
type 2 diabetes	11_17388025	rs5219	ENSG00000188211.8	NCR3LG1	36299	1.4e-05	0.457828	1e-09
type 2 diabetes	11_17388025	rs5219	ENSG00000188211.8	NCR3LG1	36299	1.4e-05	0.457828	3e-48
type 2 diabetes	11_17388025	rs5219	ENSG00000188211.8	NCR3LG1	36299	1.4e-05	0.457828	2e-22
type 2 diabetes	11_17388025	rs5219	ENSG00000188211.8	NCR3LG1	36299	1.4e-05	0.457828	6e-22
type 2 diabetes	11_17388025	rs5219	ENSG00000188211.8	NCR3LG1	36299	1.4e-05	0.457828	7e-11
type 2 diabetes	11_17390274	rs2074314	ENSG00000188211.8	NCR3LG1	38548	1.76e-05	0.454914	2e-12
type 2 diabetes	11_34887233	rs2956092	ENSG00000149089.12	APIP	-29266	4.37e-07	0.532941	2e-10
type 2 diabetes	11_34960601	rs2767036	ENSG00000149089.12	APIP	44102	1.16e-07	0.539648	3e-08
type 2 diabetes	11_43856384	rs1061810	ENSG00000149084.12	HSD17B12	175704	5.97e-13	-0.557329	4e-10
type 2 diabetes	11_43856384	rs1061810	ENSG00000149084.12	HSD17B12	175704	5.97e-13	-0.557329	6e-13
type 2 diabetes	11_43856909	rs35251247	ENSG00000149084.12	HSD17B12	176229	3.33e-14	-0.583707	2e-13
type 2 diabetes	11_47508395	rs7124681	ENSG00000172247.3	C1QTNF4	-86264	5.14e-07	-0.434327	5e-09
type 2 diabetes	11_65558683	rs12789028	ENSG00000172543.7	CTSW	-321126	1.79e-05	-0.511762	4e-20
type 2 diabetes	11_65564802	rs2510078	ENSG00000260233.3	ZNRD2-DT	-5621	2.82e-05	0.399022	6e-09
type 2 diabetes	11_65575510	rs67924081	ENSG00000260233.3	ZNRD2-DT	5087	9.97e-06	0.426605	1e-11
type 2 diabetes	11_74914952	rs480840	ENSG00000166435.15	XRRA1	-34248	1.77e-10	-0.601477	4e-08
type 2 diabetes	11_8632981	rs10769936	ENSG00000166436.15	TRIM66	-38885	3.42e-06	0.412833	6e-12
type 2 diabetes	11_8654691	rs10840102	ENSG00000166436.15	TRIM66	-17175	5.07e-06	-0.415748	2e-09
type 2 diabetes	11_8655516	rs7941510	ENSG00000166436.15	TRIM66	-16350	5.07e-06	-0.415748	2e-17
type 2 diabetes	12_122966218	rs4148856	ENSG00000111328.6	CDK2AP1	-306116	3.71e-05	0.32293	2e-10
type 2 diabetes	12_123008576	rs12820906	ENSG00000111328.6	CDK2AP1	-263758	3.59e-05	-0.348883	2e-15
type 2 diabetes	12_123156306	rs1727313	ENSG00000111328.6	CDK2AP1	-116028	9.68e-06	0.365425	1e-08
type 2 diabetes	12_123321672	rs1060105	ENSG00000111328.6	CDK2AP1	49338	7.49e-06	-0.356469	1e-07
type 2 diabetes	12_123321672	rs1060105	ENSG00000111328.6	CDK2AP1	49338	7.49e-06	-0.356469	4e-06
type 2 diabetes	12_123321672	rs1060105	ENSG00000111328.6	CDK2AP1	49338	7.49e-06	-0.356469	6e-07
type 2 diabetes	12_54147966	rs1872635	ENSG00000248265.1	FLJ12825	89712	1.48e-05	0.538868	1e-08
type 2 diabetes	12_56049558	rs11171731	ENSG00000197728.9	RPS26	7705	1.63e-15	-0.782145	9e-06
type 2 diabetes	12_56076841	rs11171739	ENSG00000197728.9	RPS26	34988	6.49e-47	-1.18695	1e-18
type 2 diabetes	12_56263432	rs111885088	ENSG00000257303.1	CNPY2-AS1	-36710	8.91e-06	-0.713674	4e-13
type 2 diabetes	15_43602920	rs2447198	ENSG00000166762.16	CATSPER2	-64782	2.55e-05	-0.476258	5e-10
type 2 diabetes	15_43602920	rs2447198	ENSG00000168803.14	ADAL	272246	2.3e-11	-0.830095	5e-10
type 2 diabetes	15_74039318	rs12917449	ENSG00000137868.18	STRA6	-172827	1.33e-05	0.496411	5e-10
type 2 diabetes	15_75449754	rs8038760	ENSG00000140400.16	MAN2C1	81600	1.65e-16	0.723964	2e-11
type 2 diabetes	15_75522047	rs6495182	ENSG00000140400.16	MAN2C1	153893	9.85e-17	0.74323	3e-14
type 2 diabetes	15_75522047	rs6495182	ENSG00000140400.16	MAN2C1	153893	9.85e-17	0.74323	2e-22
type 2 diabetes	15_75635851	rs7166281	ENSG00000140400.16	MAN2C1	267697	6.61e-11	0.545415	1e-07
type 2 diabetes	15_75639788	rs13737	ENSG00000140400.16	MAN2C1	271634	3.68e-11	0.548808	6e-10
type 2 diabetes	15_89828835	rs4932143	ENSG00000157823.16	AP3S2	-65803	1.07e-15	-0.795381	6e-11
type 2 diabetes	15_89831025	rs2028299	ENSG00000157823.16	AP3S2	-63613	1.5e-14	-0.769981	3e-06
type 2 diabetes	15_89831025	rs2028299	ENSG00000157823.16	AP3S2	-63613	1.5e-14	-0.769981	5e-07
type 2 diabetes	15_89831025	rs2028299	ENSG00000157823.16	AP3S2	-63613	1.5e-14	-0.769981	2e-11
type 2 diabetes	15_89831025	rs2028299	ENSG00000157823.16	AP3S2	-63613	1.5e-14	-0.769981	4e-08
type 2 diabetes	15_89836982	rs8031576	ENSG00000157823.16	AP3S2	-57656	4.34e-15	-0.765561	2e-09
type 2 diabetes	15_89836982	rs8031576	ENSG00000157823.16	AP3S2	-57656	4.34e-15	-0.765561	2e-29
type 2 diabetes	15_89838046	rs893617	ENSG00000157823.16	AP3S2	-56592	1.5e-14	-0.769981	2e-38
type 2 diabetes	15_89840813	rs2351707	ENSG00000157823.16	AP3S2	-53825	1.5e-14	-0.769981	9e-16
type 2 diabetes	15_89873508	rs7163629	ENSG00000157823.16	AP3S2	-21130	1.51e-12	-0.747264	1e-09
type 2 diabetes	15_89880061	rs4932265	ENSG00000157823.16	AP3S2	-14577	9.93e-14	-0.818632	4e-20
type 2 diabetes	15_89885662	rs10852123	ENSG00000157823.16	AP3S2	-8976	1.92e-12	-0.820131	8e-13
type 2 diabetes	15_89885916	rs12912009	ENSG00000157823.16	AP3S2	-8722	3.78e-14	-0.773213	3e-09
type 2 diabetes	15_89885916	rs12912009	ENSG00000157823.16	AP3S2	-8722	3.78e-14	-0.773213	4e-06
type 2 diabetes	15_89891656	rs7174878	ENSG00000157823.16	AP3S2	-2982	1.88e-14	-0.83431	4e-08
type 2 diabetes	16_15059860	rs9927842	ENSG00000188599.17	NPIPP1	-63638	2.21e-06	-0.506603	7e-09
type 2 diabetes	16_15059860	rs9927842	ENSG00000183426.16	NPIPA1	122446	1.18e-06	-0.703454	7e-09
type 2 diabetes	16_15059860	rs9927842	ENSG00000188599.17	NPIPP1	-63638	2.21e-06	-0.506603	7e-10
type 2 diabetes	16_15059860	rs9927842	ENSG00000183426.16	NPIPA1	122446	1.18e-06	-0.703454	7e-10
type 2 diabetes	16_28886131	rs8056890	ENSG00000197165.10	SULT1A2	289022	1.66e-11	0.636407	2e-12
type 2 diabetes	16_28886131	rs8056890	ENSG00000259982.1	CDC37P1	184591	8.98e-09	0.602847	2e-12
type 2 diabetes	16_28903896	rs8046545	ENSG00000259982.1	CDC37P1	202356	2.84e-08	-0.584783	2e-08
type 2 diabetes	16_28903896	rs8046545	ENSG00000197165.10	SULT1A2	306787	2.73e-10	-0.603409	2e-08
type 2 diabetes	16_28906323	rs7188071	ENSG00000197165.10	SULT1A2	309214	3.43e-11	-0.625599	1e-09
type 2 diabetes	16_28906323	rs7188071	ENSG00000259982.1	CDC37P1	204783	1.79e-08	-0.589708	1e-09
type 2 diabetes	16_29946895	rs8054556	ENSG00000169592.14	INO80E	-48399	1.24e-09	-0.419476	2e-16
type 2 diabetes	16_29946895	rs8054556	ENSG00000169592.14	INO80E	-48399	1.24e-09	-0.419476	4e-15
type 2 diabetes	16_30034468	rs11642430	ENSG00000169592.14	INO80E	39174	2.13e-06	-0.345711	2e-09
type 2 diabetes	16_3533173	rs3751837	ENSG00000103351.12	CLUAP1	32249	3.76e-09	0.482363	1e-08
type 2 diabetes	16_3584745	rs12933120	ENSG00000167984.17	NLRC3	7345	7.8e-07	-0.559436	3e-10
type 2 diabetes	16_3584745	rs12933120	ENSG00000103351.12	CLUAP1	83821	1.9e-11	0.62822	3e-10
type 2 diabetes	16_3597097	rs2240885	ENSG00000103351.12	CLUAP1	96173	2.04e-09	0.458464	3e-09
type 2 diabetes	16_3606481	rs8061528	ENSG00000103351.12	CLUAP1	105557	2.09e-11	0.533611	3e-14
type 2 diabetes	16_53468034	rs4281707	ENSG00000103479.15	RBL2	34057	3.98e-15	-0.556135	3e-10
type 2 diabetes	16_53492639	rs9931702	ENSG00000103479.15	RBL2	58662	8.62e-15	-0.572505	4e-08
type 2 diabetes	16_70626340	rs13330163	ENSG00000261556.9	SMG1P7	379730	3.11e-05	0.31616	4e-08
type 2 diabetes	16_71988635	rs12600132	ENSG00000102967.11	DHODH	-19953	6.63e-06	-0.377036	6e-09
type 2 diabetes	16_89564222	rs12932337	ENSG00000167526.13	RPL13	3565	1.61e-06	-0.375582	8e-11
type 2 diabetes	17_43379045	rs56799554	ENSG00000198496.10	NBR2	253435	3.55e-07	-0.660966	4e-11
type 2 diabetes	17_46006582	rs8067056	ENSG00000238083.7	LRRC37A2	-504929	1.16e-06	0.476046	3e-08
type 2 diabetes	17_46006582	rs8067056	ENSG00000263503.1	MAPK8IP1P2	404242	5.11e-12	0.723995	3e-08
type 2 diabetes	17_46006582	rs8067056	ENSG00000264070.1	DND1P1	420711	4.08e-12	0.728987	3e-08
type 2 diabetes	17_46006582	rs8067056	ENSG00000214401.4	KANSL1-AS1	-186994	2.88e-13	0.782692	3e-08
type 2 diabetes	17_46006582	rs8067056	ENSG00000214425.7	LRRC37A4P	456247	1.3e-09	-0.615949	3e-08
type 2 diabetes	17_46006582	rs8067056	ENSG00000204650.14	LINC02210	386254	4.54e-12	0.4355	3e-08
type 2 diabetes	17_46006582	rs8067056	ENSG00000262500.1	MAPK8IP1P1	-237024	4.35e-11	0.653881	3e-08
type 2 diabetes	17_47808390	rs9911983	ENSG00000141295.13	SCRN2	-32943	2.2e-06	-0.324978	5e-08
type 2 diabetes	17_47808390	rs9911983	ENSG00000141295.13	SCRN2	-32943	2.2e-06	-0.324978	5e-08
type 2 diabetes	17_48862296	rs10278	ENSG00000159210.9	SNF8	-82821	3.2e-06	-0.215603	3e-08
type 2 diabetes	17_48862296	rs10278	ENSG00000159210.9	SNF8	-82821	3.2e-06	-0.215603	3e-06
type 2 diabetes	17_50559173	rs989128	ENSG00000006282.20	SPATA20	12867	6.38e-23	-0.567913	4e-06
type 2 diabetes	17_78765957	rs62075585	ENSG00000055483.19	USP36	-75484	6.73e-06	0.271165	1e-10
type 2 diabetes	17_78776206	rs7224711	ENSG00000055483.19	USP36	-65235	7.74e-07	0.292114	1e-15
type 2 diabetes	18_12777574	rs2542148	ENSG00000260302.1	LINC01882	1651	1.15e-05	-0.663803	3e-16
type 2 diabetes	19_12899829	rs9384	ENSG00000105607.12	GCDH	8803	9.18e-06	0.350584	8e-23
type 2 diabetes	19_12927601	rs3111316	ENSG00000105607.12	GCDH	36575	1.58e-06	-0.357538	6e-13
type 2 diabetes	19_12927601	rs3111316	ENSG00000105607.12	GCDH	36575	1.58e-06	-0.357538	3e-21
type 2 diabetes	2_195798891	rs4358140	ENSG00000118997.13	DNAH7	-269921	1.61e-06	0.548362	2e-09
type 2 diabetes	20_38392336	rs736368	ENSG00000196756.11	SNHG17	-43017	3.04e-12	0.772765	9e-06
type 2 diabetes	21_42434957	rs1893592	ENSG00000160185.14	UBASH3A	31510	4.59e-06	0.348843	2e-09
type 2 diabetes	21_46347381	rs75756987	ENSG00000182362.13	YBEY	61044	1.2e-09	0.913299	2e-09
type 2 diabetes	22_30156522	rs4336042	ENSG00000100296.13	THOC5	602268	2.28e-05	0.39506	2e-11
type 2 diabetes	22_41093916	rs5758223	ENSG00000235513.1	L3MBTL2-AS1	-123711	3.69e-08	0.476001	4e-08
type 2 diabetes	22_41197577	rs11913442	ENSG00000235513.1	L3MBTL2-AS1	-20050	1.65e-09	0.46834	8e-10
type 2 diabetes	22_41197869	rs5751061	ENSG00000235513.1	L3MBTL2-AS1	-19758	4.79e-09	0.459756	3e-08
type 2 diabetes	3_46884049	rs11926707	ENSG00000188086.13	PRSS45P	139294	1.48e-05	-0.394411	2e-08
type 2 diabetes	3_46884049	rs11926707	ENSG00000188086.13	PRSS45P	139294	1.48e-05	-0.394411	2e-08
type 2 diabetes	3_49943163	rs4688760	ENSG00000004534.14	RBM6	3156	1.17e-05	-0.312231	4e-10
type 2 diabetes	3_49943163	rs4688760	ENSG00000004534.14	RBM6	3156	1.17e-05	-0.312231	1e-11
type 2 diabetes	3_49958085	rs6792892	ENSG00000004534.14	RBM6	18078	6.91e-14	-0.448896	1e-14
type 2 diabetes	3_53091413	rs62255926	ENSG00000242142.1	SERBP1P3	26322	2.34e-07	-0.453017	4e-08
type 2 diabetes	3_53093661	rs2581787	ENSG00000242142.1	SERBP1P3	28570	4.66e-10	0.477711	3e-08
type 2 diabetes	3_53093661	rs2581787	ENSG00000163933.9	RFT1	-36801	1.65e-12	-0.533162	3e-08
type 2 diabetes	3_53093661	rs2581787	ENSG00000242142.1	SERBP1P3	28570	4.66e-10	0.477711	2e-08
type 2 diabetes	3_53093661	rs2581787	ENSG00000163933.9	RFT1	-36801	1.65e-12	-0.533162	2e-08
type 2 diabetes	4_102974160	rs7659468	ENSG00000230069.3	LRRC37A15P	243439	1.84e-05	-0.48918	1e-14
type 2 diabetes	4_103067742	rs7674212	ENSG00000248971.2	KRT8P46	337571	1.11e-05	-0.50399	6e-10
type 2 diabetes	4_103067742	rs7674212	ENSG00000248971.2	KRT8P46	337571	1.11e-05	-0.50399	7e-09
type 2 diabetes	4_103219691	rs1580278	ENSG00000230069.3	LRRC37A15P	488970	3.42e-05	-0.491262	2e-10
type 2 diabetes	4_947730	rs2290402	ENSG00000145217.13	SLC26A1	-45710	1.01e-06	0.690956	7e-06
type 2 diabetes	5_56808481	rs10461617	ENSG00000155542.11	SETD9	-100779	3.59e-18	1.0934	4e-06
type 2 diabetes	5_56900777	rs96844	ENSG00000155542.11	SETD9	-8483	1.38e-11	0.802703	5e-08
type 2 diabetes	6_153106967	rs9383649	ENSG00000091844.7	RGS17	-24282	1.03e-06	-0.581	1e-12
type 2 diabetes	6_153119635	rs7758002	ENSG00000091844.7	RGS17	-11614	1.43e-06	-0.578506	5e-16
type 2 diabetes	6_28958443	rs9257408	ENSG00000187987.9	ZSCAN23	514941	1.23e-06	0.411231	2e-10
type 2 diabetes	6_29848644	rs2394186	ENSG00000206341.7	HLA-H	-39823	8.06e-06	0.630122	2e-08
type 2 diabetes	6_29848644	rs2394186	ENSG00000235290.1	HLA-W	-107952	6.64e-05	0.559462	2e-08
type 2 diabetes	6_29848644	rs2394186	ENSG00000230795.3	HLA-K	-78534	3.58e-05	-0.482975	2e-08
type 2 diabetes	6_31197002	rs28362333	ENSG00000204528.3	PSORS1C3	19103	3.57e-05	0.455148	7e-20
type 2 diabetes	6_31197002	rs28362333	ENSG00000204538.3	PSORS1C2	57652	6.8e-06	0.393857	7e-20
type 2 diabetes	6_31306778	rs10484554	ENSG00000204540.10	PSORS1C1	192028	1.32e-05	0.582407	2e-302
type 2 diabetes	6_31306778	rs10484554	ENSG00000225851.1	HLA-S	-75510	5.08e-05	0.644097	2e-302
type 2 diabetes	6_32170768	rs3130283	ENSG00000198502.5	HLA-DRB5	-359519	4.4e-11	-0.916286	6e-27
type 2 diabetes	6_32170768	rs3130283	ENSG00000229391.7	HLA-DRB6	-389254	6.71e-08	0.74018	6e-27
type 2 diabetes	6_32372120	rs2050188	ENSG00000229391.7	HLA-DRB6	-187902	1.07e-07	0.540103	8e-09
type 2 diabetes	6_32372120	rs2050188	ENSG00000229391.7	HLA-DRB6	-187902	1.07e-07	0.540103	9e-06
type 2 diabetes	6_32460338	rs115918645	ENSG00000179344.16	HLA-DQB1	-208045	2.22e-05	-0.556244	1e-11
type 2 diabetes	6_32460338	rs115918645	ENSG00000237541.3	HLA-DQA2	-281004	9.62e-18	1.06194	1e-11
type 2 diabetes	6_32460338	rs115918645	ENSG00000229391.7	HLA-DRB6	-99684	3.87e-14	0.89193	1e-11
type 2 diabetes	6_32460338	rs115918645	ENSG00000223534.1	HLA-DQB1-AS1	-200017	4.14e-06	-0.485963	1e-11
type 2 diabetes	6_32605638	rs601945	ENSG00000237541.3	HLA-DQA2	-135704	8.1e-13	0.988714	5e-08
type 2 diabetes	6_32605638	rs601945	ENSG00000229391.7	HLA-DRB6	45616	7.62e-08	0.716704	5e-08
type 2 diabetes	6_32626532	rs9271774	ENSG00000198502.5	HLA-DRB5	96245	2.3e-19	-1.01361	1e-09
type 2 diabetes	6_32626532	rs9271774	ENSG00000196301.3	HLA-DRB9	153032	4.19e-06	0.573861	1e-09
type 2 diabetes	6_32626532	rs9271774	ENSG00000229391.7	HLA-DRB6	66510	5.46e-16	0.900169	1e-09
type 2 diabetes	6_32634705	rs3104369	ENSG00000229391.7	HLA-DRB6	74683	1.24e-11	0.711446	9e-15
type 2 diabetes	6_32634705	rs3104369	ENSG00000179344.16	HLA-DQB1	-33678	1.51e-06	-0.543285	9e-15
type 2 diabetes	6_32634705	rs3104369	ENSG00000198502.5	HLA-DRB5	104418	3.15e-09	-0.664052	9e-15
type 2 diabetes	6_32658698	rs9273368	ENSG00000229391.7	HLA-DRB6	98676	1.36e-08	0.615444	3e-78
type 2 diabetes	6_32658698	rs9273368	ENSG00000237541.3	HLA-DQA2	-82644	2.39e-06	0.565919	3e-78
type 2 diabetes	6_32658698	rs9273368	ENSG00000223534.1	HLA-DQB1-AS1	-1657	2.56e-05	-0.39107	3e-78
type 2 diabetes	6_32658698	rs9273368	ENSG00000179344.16	HLA-DQB1	-9685	5.35e-09	-0.646702	3e-78
type 2 diabetes	6_32658698	rs9273368	ENSG00000229391.7	HLA-DRB6	98676	1.36e-08	0.615444	7e-40
type 2 diabetes	6_32658698	rs9273368	ENSG00000237541.3	HLA-DQA2	-82644	2.39e-06	0.565919	7e-40
type 2 diabetes	6_32658698	rs9273368	ENSG00000223534.1	HLA-DQB1-AS1	-1657	2.56e-05	-0.39107	7e-40
type 2 diabetes	6_32658698	rs9273368	ENSG00000179344.16	HLA-DQB1	-9685	5.35e-09	-0.646702	7e-40
type 2 diabetes	6_32659937	rs1063355	ENSG00000223534.1	HLA-DQB1-AS1	-418	8.46e-09	-0.491299	4e-19
type 2 diabetes	6_32659937	rs1063355	ENSG00000229391.7	HLA-DRB6	99915	3.44e-08	0.569168	4e-19
type 2 diabetes	6_32659937	rs1063355	ENSG00000196735.11	HLA-DQA1	31758	2.17e-08	-0.512879	4e-19
type 2 diabetes	6_32659937	rs1063355	ENSG00000179344.16	HLA-DQB1	-8446	6.1e-32	-1.01392	4e-19
type 2 diabetes	6_32659937	rs1063355	ENSG00000232629.8	HLA-DQB2	-103597	4e-06	0.506224	4e-19
type 2 diabetes	6_32659937	rs1063355	ENSG00000237541.3	HLA-DQA2	-81405	1.15e-12	0.763388	4e-19
type 2 diabetes	6_32686937	rs9275184	ENSG00000237541.3	HLA-DQA2	-54405	1.22e-08	0.937191	6e-24
type 2 diabetes	6_32686937	rs9275184	ENSG00000229391.7	HLA-DRB6	126915	3.01e-07	0.787401	6e-24
type 2 diabetes	6_32717773	rs3916765	ENSG00000237541.3	HLA-DQA2	-23569	1.51e-05	0.755312	1e-06
type 2 diabetes	6_34556921	rs2233632	ENSG00000065060.16	UHRF1BP1	-235094	4.04e-06	-0.516777	5e-07
type 2 diabetes	7_100715797	rs506597	ENSG00000146830.9	GIGYF1	26349	1e-05	-0.485194	2e-10
type 2 diabetes	7_140912363	rs9648716	ENSG00000090266.12	NDUFB2	215542	2.99e-08	-0.345452	1e-09
type 2 diabetes	7_140912363	rs9648716	ENSG00000090266.12	NDUFB2	215542	2.99e-08	-0.345452	4e-07
type 2 diabetes	7_55734370	rs6972291	ENSG00000185290.3	NUPR2	-382030	1.39e-26	1.06445	2e-09
type 2 diabetes	7_55734370	rs6972291	ENSG00000226278.1	PSPHP1	-30427	1.53e-42	1.20536	2e-09
type 2 diabetes	7_7210116	rs11763876	ENSG00000106392.10	C1GALT1	53182	3.61e-08	0.552799	7e-08
type 2 diabetes	7_74662156	rs13238568	ENSG00000196275.13	GTF2IRD2	-189395	4.44e-07	-0.327389	2e-09
type 2 diabetes	7_74674569	rs35473599	ENSG00000123965.13	PMS2P5	-219547	2.84e-09	-0.808741	3e-09
type 2 diabetes	7_74674569	rs35473599	ENSG00000263001.5	GTF2I	16902	2.91e-07	-0.261902	3e-09
type 2 diabetes	7_74674569	rs35473599	ENSG00000196275.13	GTF2IRD2	-176982	1.87e-13	-0.525895	3e-09
type 2 diabetes	7_74693803	rs67755137	ENSG00000196275.13	GTF2IRD2	-157748	2.07e-13	-0.59026	2e-08
type 2 diabetes	7_74693803	rs67755137	ENSG00000123965.13	PMS2P5	-200313	2.04e-08	-0.865014	2e-08
type 2 diabetes	7_74693803	rs67755137	ENSG00000263001.5	GTF2I	36136	7.4e-07	-0.28521	2e-08
type 2 diabetes	7_74693803	rs67755137	ENSG00000277053.4	GTF2IP1	-543893	3.96e-07	0.622758	2e-08
type 2 diabetes	7_90105004	rs39204	ENSG00000164647.8	STEAP1	-49371	1.56e-05	-0.368329	4e-08
type 2 diabetes	7_90110704	rs39218	ENSG00000164647.8	STEAP1	-43671	1.56e-05	-0.370332	1e-09
type 2 diabetes	7_90117316	rs39223	ENSG00000164647.8	STEAP1	-37059	1.56e-05	-0.368329	3e-10
type 2 diabetes	7_90122924	rs62469016	ENSG00000164647.8	STEAP1	-31451	1.22e-05	-0.370808	2e-15
type 2 diabetes	7_90174320	rs6956980	ENSG00000164647.8	STEAP1	19945	5.58e-06	-0.373388	1e-13
type 2 diabetes	8_10775649	rs10100265	ENSG00000183638.5	RP1L1	63462	1.37e-07	-0.388561	6e-10
type 2 diabetes	8_144778182	rs2294120	ENSG00000196378.11	ZNF34	-9163	1.27e-05	-0.277258	2e-08
type 2 diabetes	8_8311465	rs7841082	ENSG00000173295.7	FAM86B3P	82870	9.69e-09	-0.573359	5e-08
type 2 diabetes	8_8460585	rs2980766	ENSG00000173295.7	FAM86B3P	231990	3.11e-09	0.56893	8e-11
type 2 diabetes	8_8863963	rs4382480	ENSG00000173295.7	FAM86B3P	635368	1.87e-10	0.634671	2e-13
type 2 diabetes	8_8863963	rs4382480	ENSG00000253981.5	ALG1L13P	619923	1.3e-05	0.476327	2e-13
type 2 diabetes	9_133261662	rs687621	ENSG00000175164.13	ABO	-13552	5.79e-10	-0.613131	1e-08
type 2 diabetes	9_133269828	rs495203	ENSG00000175164.13	ABO	-5386	4.88e-11	-0.639572	1e-24
type 2 diabetes	9_133271745	rs554833	ENSG00000175164.13	ABO	-3469	4.88e-11	-0.639572	4e-12
type 2 diabetes	9_133273813	rs505922	ENSG00000175164.13	ABO	-1401	1.18e-10	-0.629917	5e-08
type 2 diabetes	9_133273813	rs505922	ENSG00000175164.13	ABO	-1401	1.18e-10	-0.629917	4e-12
type 2 diabetes	9_133274084	rs529565	ENSG00000175164.13	ABO	-1130	6.01e-11	-0.640375	8e-27
type 2 diabetes	9_133274084	rs529565	ENSG00000175164.13	ABO	-1130	6.01e-11	-0.640375	2e-10
type 2 diabetes	X_57952919	rs73226048	ENSG00000231831.1	MTHFD1P1	557510	9.63e-08	0.491604	2e-17
type 2 diabetes	X_57952919	rs73226048	ENSG00000186787.8	SPIN2B	831373	1.15e-05	0.376367	2e-17
type 2 diabetes	X_57975265	rs5946791	ENSG00000231831.1	MTHFD1P1	579856	2.04e-06	0.407847	4e-11