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rs579459 |
SNP |
PedAM |
snpId=rs579459; pubmedId=24795506; geneId=1909; geneSymbol=EDNRA; diseaseId=umls:C0003873; sourceId=BeFree; sentence=Our results do not confirm association between ABO rs579459, PPAP2B rs17114036, ADAMTS7 rs3825807, PIK3CG rs17398575, and EDNRA rs1878406 and subclinical atherosclerosis and CV disease in RA.; score=0.000814326; Year=2014; geneSymbol_dbSNP=NA; CHROMOSOME=9; POS=133278724; REF=C; ALT=T |
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rs59744560 |
SNP |
PedAM |
snpId=rs59744560; pubmedId=21906432; geneId=10135; geneSymbol=NAMPT; diseaseId=umls:C0003873; sourceId=BeFree; sentence=Lack of association of NAMPT rs9770242 and rs59744560 polymorphisms with disease susceptibility and cardiovascular risk in patients with rheumatoid arthritis.; score=0.000814326; Year=2011; geneSymbol_dbSNP=NAMPT; CHROMOSOME=7; POS=106285832; REF=C; ALT=A |
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rs59744560 |
SNP |
PedAM |
snpId=rs59744560; pubmedId=21906432; geneId=49; geneSymbol=ACR; diseaseId=umls:C0003873; sourceId=BeFree; sentence=A total of 1,395 patients fulfilling the 1987 ACR classification criteria for RA and 1,230 matched controls, were genotyped for the NAMPT rs9770242 and rs59744560 gene polymorphisms, located within the proximal promoter, using predesigned TaqMan single nucleotide polymorphism genotyping assay.; score=0.005700279; Year=2011; geneSymbol_dbSNP=NAMPT; CHROMOSOME=7; POS=106285832; REF=C; ALT=A |
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rs5987194 |
SNP |
PedAM |
snpId=rs5987194; pubmedId=24390342; geneId=4204; geneSymbol=MECP2; diseaseId=umls:C0003873; sourceId=GWASCAT; sentence=Genetics of rheumatoid arthritis contributes to biology and drug discovery.; score=0.120814326; Year=2013; geneSymbol_dbSNP=MECP2; CHROMOSOME=X; POS=154036016; REF=C; ALT=G |
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rs6026990 |
SNP |
PedAM |
snpId=rs6026990; pubmedId=22491018; geneId=116154; geneSymbol=PHACTR3; diseaseId=umls:C0003873; sourceId=GAD; sentence=[Genome-wide association analysis implicates the involvement of eight loci with response to tocilizumab for the treatment of rheumatoid arthritis.]; score=0.002367032; Year=2013; geneSymbol_dbSNP=PHACTR3; CHROMOSOME=20; POS=59602560; REF=T; ALT=A |
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rs6136 |
SNP |
PedAM |
snpId=rs6136; pubmedId=25147926; geneId=6403; geneSymbol=SELP; diseaseId=umls:C0003873; sourceId=BeFree; sentence=SELP (selectin P, CD62P) SNP-allele rs6136-T was associated with risk for RA in two RA family sample groups as well as in global analysis of all three groups (ptotal=0.003).; score=0.002995792; Year=2014; geneSymbol_dbSNP=SELP; CHROMOSOME=1; POS=169594713; REF=T; ALT=G |
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rs6138150 |
SNP |
PedAM |
snpId=rs6138150; pubmedId=18615156; geneId=1470; geneSymbol=CST2; diseaseId=umls:C0003873; sourceId=GAD; sentence=[Genome-wide association scan identifies candidate polymorphisms associated with differential response to anti-TNF treatment in rheumatoid arthritis.]; score=0.002367032; Year=2008; geneSymbol_dbSNP=NA; CHROMOSOME=20; POS=23866372; REF=T; ALT=C |
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rs6138892 |
SNP |
PedAM |
snpId=rs6138892; pubmedId=22491018; geneId=57593; geneSymbol=EBF4; diseaseId=umls:C0003873; sourceId=GAD; sentence=[Genome-wide association analysis implicates the involvement of eight loci with response to tocilizumab for the treatment of rheumatoid arthritis.]; score=0.002367032; Year=2013; geneSymbol_dbSNP=NA; CHROMOSOME=20; POS=2774842; REF=T; ALT=C |
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rs615672 |
SNP |
PedAM |
snpId=rs615672; pubmedId=23678157; geneId=3118; geneSymbol=HLA-DQA2; diseaseId=umls:C0003873; sourceId=BeFree; sentence=Among these associations, we found that 8 single-nucleotide polymorphisms (SNP; rs1600249, rs2736340, rs3093023, rs3093024, rs4810485, rs615672, rs660895, and rs9272219) serve as cis-effect regulators of the corresponding eQTL genes (BLK and CD4 in non-HLA region; CCR6, HLA-DQA1, and HLA-DQB1 in HLA region) that also were differentially expressed in RA-related cell groups.; score=0.123452799; Year=2014; geneSymbol_dbSNP=NA; CHROMOSOME=6; POS=32606394; REF=G; ALT=C |
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rs615672 |
SNP |
PedAM |
snpId=rs615672; pubmedId=23678157; geneId=3119; geneSymbol=HLA-DQB1; diseaseId=umls:C0003873; sourceId=BeFree; sentence=Among these associations, we found that 8 single-nucleotide polymorphisms (SNP; rs1600249, rs2736340, rs3093023, rs3093024, rs4810485, rs615672, rs660895, and rs9272219) serve as cis-effect regulators of the corresponding eQTL genes (BLK and CD4 in non-HLA region; CCR6, HLA-DQA1, and HLA-DQB1 in HLA region) that also were differentially expressed in RA-related cell groups.; score=0.051226702; Year=2014; geneSymbol_dbSNP=NA; CHROMOSOME=6; POS=32606394; REF=G; ALT=C |
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rs615672 |
SNP |
PedAM |
snpId=rs615672; pubmedId=23678157; geneId=640; geneSymbol=BLK; diseaseId=umls:C0003873; sourceId=BeFree; sentence=Among these associations, we found that 8 single-nucleotide polymorphisms (SNP; rs1600249, rs2736340, rs3093023, rs3093024, rs4810485, rs615672, rs660895, and rs9272219) serve as cis-effect regulators of the corresponding eQTL genes (BLK and CD4 in non-HLA region; CCR6, HLA-DQA1, and HLA-DQB1 in HLA region) that also were differentially expressed in RA-related cell groups.; score=0.128458305; Year=2014; geneSymbol_dbSNP=NA; CHROMOSOME=6; POS=32606394; REF=G; ALT=C |
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rs61756766 |
SNP |
PedAM |
snpId=rs61756766; pubmedId=26097183; geneId=115650; geneSymbol=TNFRSF13C; diseaseId=umls:C0003873; sourceId=BeFree; sentence=The corresponding frequencies of the His159Tyr BAFF-R mutation in SLE and RA patients were 3.5% and 3%, respectively.; score=0.003810118; Year=2015; geneSymbol_dbSNP=TNFRSF13C; CHROMOSOME=22; POS=41925447; REF=G; ALT=A |
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rs6198 |
SNP |
PedAM |
snpId=rs6198; pubmedId=18830906; geneId=595; geneSymbol=CCND1; diseaseId=umls:C0003873; sourceId=BeFree; sentence=Specific complex genotypes were also differentially distributed: the GR-alpha complex genotypes (a) [homozygote (homo) wild-type (wt) rs33388-homo wt rs33389] (11% RA vs. 21% controls; p = 0.023), (b) [homo wt rs33388-homo wt rs33389-homo non-wt Bcl I] (0.7% RA vs. 4.7% controls; p = 0.042), and (c) the GR-beta complex genotype [homo wt rs33388-homo wt rs33389-homo non-wt Bcl I-homo wt rs6198] (0.7% RA vs. 4.7% controls; p = 0.042).; score=0.000542884; Year=2009; geneSymbol_dbSNP=NR3C1;LOC105378206; CHROMOSOME=5; POS=143278056; REF=T; ALT=C |
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rs6314 |
SNP |
PedAM |
snpId=rs6314; pubmedId=23254357; geneId=3356; geneSymbol=HTR2A; diseaseId=umls:C0003873; sourceId=BeFree; sentence=Patients with established RA (n=379) were genotyped for two single-nucleotide polymorphisms (SNPs) in the HTR2A locus, rs6314 and rs1328674, to define presence of the risk haplotype for each individual.; score=0.008186863; Year=2013; geneSymbol_dbSNP=HTR2A; CHROMOSOME=13; POS=46834899; REF=G; ALT=A |
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rs6445975 |
SNP |
PedAM |
snpId=rs6445975; pubmedId=19714582; geneId=3684; geneSymbol=ITGAM; diseaseId=umls:C0003873; sourceId=BeFree; sentence=A characteristic single-nucleotide polymorphism (SNP) in each of 9 genetic factors, ITGAM (rs1143679), C8orf13-BLK (rs13277113), TYK2 (rs2304256), 1q25.1 (rs10798269), PXK (rs6445975), KIAA1542 (rs4963128), MECP2 (rs17435), BANK1 (rs17266594), and LY9 (rs509749), was studied in 1,635 patients with RA and 1,906 control subjects from Spain.; score=0.000814326; Year=2009; geneSymbol_dbSNP=PXK; CHROMOSOME=3; POS=58384450; REF=G; ALT=T |
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rs6445975 |
SNP |
PedAM |
snpId=rs6445975; pubmedId=19714582; geneId=54899; geneSymbol=PXK; diseaseId=umls:C0003873; sourceId=BeFree; sentence=A characteristic single-nucleotide polymorphism (SNP) in each of 9 genetic factors, ITGAM (rs1143679), C8orf13-BLK (rs13277113), TYK2 (rs2304256), 1q25.1 (rs10798269), PXK (rs6445975), KIAA1542 (rs4963128), MECP2 (rs17435), BANK1 (rs17266594), and LY9 (rs509749), was studied in 1,635 patients with RA and 1,906 control subjects from Spain.; score=0.125005506; Year=2009; geneSymbol_dbSNP=PXK; CHROMOSOME=3; POS=58384450; REF=G; ALT=T |
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rs6445975 |
SNP |
PedAM |
snpId=rs6445975; pubmedId=19714582; geneId=4204; geneSymbol=MECP2; diseaseId=umls:C0003873; sourceId=BeFree; sentence=A characteristic single-nucleotide polymorphism (SNP) in each of 9 genetic factors, ITGAM (rs1143679), C8orf13-BLK (rs13277113), TYK2 (rs2304256), 1q25.1 (rs10798269), PXK (rs6445975), KIAA1542 (rs4963128), MECP2 (rs17435), BANK1 (rs17266594), and LY9 (rs509749), was studied in 1,635 patients with RA and 1,906 control subjects from Spain.; score=0.120814326; Year=2009; geneSymbol_dbSNP=PXK; CHROMOSOME=3; POS=58384450; REF=G; ALT=T |
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rs6445975 |
SNP |
PedAM |
snpId=rs6445975; pubmedId=19714582; geneId=55024; geneSymbol=BANK1; diseaseId=umls:C0003873; sourceId=BeFree; sentence=A characteristic single-nucleotide polymorphism (SNP) in each of 9 genetic factors, ITGAM (rs1143679), C8orf13-BLK (rs13277113), TYK2 (rs2304256), 1q25.1 (rs10798269), PXK (rs6445975), KIAA1542 (rs4963128), MECP2 (rs17435), BANK1 (rs17266594), and LY9 (rs509749), was studied in 1,635 patients with RA and 1,906 control subjects from Spain.; score=0.003181358; Year=2009; geneSymbol_dbSNP=PXK; CHROMOSOME=3; POS=58384450; REF=G; ALT=T |
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rs6457617 |
SNP |
PedAM |
snpId=rs6457617; pubmedId=19714643; geneId=352963; geneSymbol=HLA-P; diseaseId=umls:C0003873; sourceId=BeFree; sentence=None of the SNPs tested was associated with RA susceptibility, except rs7021206 in TRAF1 intron 3 (P = 0.0032) and, among the SNPs previously reported, rs6457617 in HLA (P = 4.6 x 10(-35)).; score=0.000271442; Year=2009; geneSymbol_dbSNP=NA; CHROMOSOME=6; POS=32696074; REF=C; ALT=T |
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rs6457617 |
SNP |
PedAM |
snpId=rs6457617; pubmedId=18668548; geneId=3119; geneSymbol=HLA-DQB1; diseaseId=umls:C0003873; sourceId=GAD; sentence=[The present genome-wide association study identified KLF12 as a new susceptibility gene for RA. The joint analysis of our results and those from previous genome-wide association studies showed genomic regions with a higher probability of being genuine sus]; score=0.051226702; Year=2008; geneSymbol_dbSNP=NA; CHROMOSOME=6; POS=32696074; REF=C; ALT=T |
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